CmUC02G048390 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G048390
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RING-type domain-containing protein
Location	CmU531Chr02: 35980244 .. 35981773 (-)
RNA-Seq Expression	CmUC02G048390
Synteny	CmUC02G048390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTACCTATTGTTTTTCCAGCCACTGAAGTATTGGAAATATTTTCCTTGTTTGTTTGAGGAACGGGAGTGACCTTTTATAGTTGTACGTATGGCCATTATTTTCTTTTATTTATTCTTTCTTTTACTTTCATGAAGTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGGTATGTCCATTCATCATTCTATGGAGATCTTTTATAGTTTATAATTTGAATACTGGTATCTTTTTAAATTACTGTTCTTATTATATATTGCCTGTGCATTGTTAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAACCACTGATCGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATGCTTACCTGGGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGACAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGTCCGAGTTTGCTGGACCTAGTTCATCGAGGGAGCCTGTAACGAAACATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCAGCAGCAGCTAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAATGATTTTATGTTTAAAGCTCCTGTATAGAATAAGCTCTGCTCTTTTCCCTTTGTACAGTTCTAAGATTCAACTTACTTTGTATAAACATTGAATCTCAAATTCAATCATAAAAGAATTGTTAGCAGCTAGCATTTAGTTTCATGTAATATAACTTTTCAAAACTCTAGACTCAAACTTAGCTCCACTATATCCATTGAACTAACTTAACTTGGCTGATGAACATGTTTTATGTGCTGTTATTATAGCAACTTATTGAGCATCTAATAAAATTTATCTTTTCAGGATGAGCCATTGAAGAGGACTGGGTCGAGTTGGGGGAGGTTTTTCTGGACCAACTCGAACCCATTCACAATCTTATTCATGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCTTTTTAATTAAAAGTTGCTAATATAAAAAAATTGTGAAATCAATAGGATATGGGAACTGAAAGAAGGCAAAGAAAAGAAGACCAACAGCAACGACTTGCTGTAACTGTAAGGGGAAGTCTTTTGCCTTTTGATGTCTATCAATATGGGTTGGTGGCTAAAAGTAAATCCTAAGTTTAAGCTATTTATTCAGACTAAAATGGTTAATACTCGAATTGCTATTATAATCTATTGAGAATTAATTCAGCGCTTCGAACACTCTTTGAAGTTTAAAAAATTGTTCCAACCGTTTGTAGATATGTTTGTCTTATGTTATCA

mRNA sequence

ATGGGATTACCTATTGTTTTTCCAGCCACTGAAGTATTGGAAATATTTTCCTTTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAACCACTGATCGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATGCTTACCTGGGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGACAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGTCCGAGTTTGCTGGACCTAGTTCATCGAGGGAGCCTGTAACGAAACATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCAGCAGCAGCTAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAATGATTTTATGTTTAAAGCTCCTGTATAGAATAAGCTCTGCTCTTTTCCCTTTGTACAGTTCTAAGATTCAACTTACTTTGTATAAACATTGAATCTCAAATTCAATCATAAAAGAATTGTTAGCAGCTAGCATTTAGTTTCATGTAATATAACTTTTCAAAACTCTAGACTCAAACTTAGCTCCACTATATCCATTGAACTAACTTAACTTGGCTGATGAACATGTTTTATGTGCTGTTATTATAGCAACTTATTGAGCATCTAATAAAATTTATCTTTTCAGGATGAGCCATTGAAGAGGACTGGGTCGAGTTGGGGGAGGTTTTTCTGGACCAACTCGAACCCATTCACAATCTTATTCATGAGGATATGGGAACTGAAAGAAGGCAAAGAAAAGAAGACCAACAGCAACGACTTGCTGTAACTGTAAGGGGAAGTCTTTTGCCTTTTGATGTCTATCAATATGGGTTGGTGGCTAAAAGTAAATCCTAAGTTTAAGCTATTTATTCAGACTAAAATGGTTAATACTCGAATTGCTATTATAATCTATTGAGAATTAATTCAGCGCTTCGAACACTCTTTGAAGTTTAAAAAATTGTTCCAACCGTTTGTAGATATGTTTGTCTTATGTTATCA

Coding sequence (CDS)

ATGGGATTACCTATTGTTTTTCCAGCCACTGAAGTATTGGAAATATTTTCCTTTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAACCACTGATCGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATGCTTACCTGGGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGACAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGTCCGAGTTTGCTGGACCTAGTTCATCGAGGGAGCCTGTAACGAAACATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCAGCAGCAGCTAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAATGA

Protein sequence

MGLPIVFPATEVLEIFSFATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Homology

[Close]

BLAST of CmUC02G048390 vs. NCBI nr
Match: XP_011657615.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 7.8e-84
Identity = 163/177 (92.09%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+E
Sbjct: 71  ATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIE 130

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYDDPEDDQYY   PYEDD+EE EDAYLG SPSLRIGNRRWG NGYVRAGRQEARP
Sbjct: 131 EREETYDDPEDDQYY---PYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARP 190

Query: 139 VLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR EF GPSSSREPVTK A SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 191 VLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 244

[Close]

BLAST of CmUC02G048390 vs. NCBI nr
Match: XP_004140197.1 (uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hypothetical protein Csa_003121 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 7.8e-84
Identity = 163/177 (92.09%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+E
Sbjct: 103 ATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIE 162

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYDDPEDDQYY   PYEDD+EE EDAYLG SPSLRIGNRRWG NGYVRAGRQEARP
Sbjct: 163 EREETYDDPEDDQYY---PYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARP 222

Query: 139 VLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR EF GPSSSREPVTK A SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 223 VLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of CmUC02G048390 vs. NCBI nr
Match: TYJ96112.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 8.6e-83
Identity = 162/177 (91.53%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI E
Sbjct: 103 ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFE 162

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYD+PEDDQYY    YEDD+EE EDAYLG SPSLRIGNRRWG NGYVRAGRQEARP
Sbjct: 163 EREETYDEPEDDQYY---HYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARP 222

Query: 139 VLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR EF  GPSSSR+PVTK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 223 VLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of CmUC02G048390 vs. NCBI nr
Match: XP_038901112.1 (uncharacterized protein LOC120088112 isoform X1 [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80
Identity = 158/176 (89.77%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP IVE
Sbjct: 95  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPQIVE 154

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYDDPEDD+YY   PYEDD+EE EDAYLGVSP+LRIGNRRWG NGYVRAGRQEARP
Sbjct: 155 EREETYDDPEDDRYY---PYEDDDEELEDAYLGVSPNLRIGNRRWGFNGYVRAGRQEARP 214

Query: 139 VLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR + A PSSSREP     SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 215 VLRPQLAEPSSSREP----TSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 263

[Close]

BLAST of CmUC02G048390 vs. NCBI nr
Match: XP_038901113.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80
Identity = 158/176 (89.77%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP IVE
Sbjct: 63  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPQIVE 122

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYDDPEDD+YY   PYEDD+EE EDAYLGVSP+LRIGNRRWG NGYVRAGRQEARP
Sbjct: 123 EREETYDDPEDDRYY---PYEDDDEELEDAYLGVSPNLRIGNRRWGFNGYVRAGRQEARP 182

Query: 139 VLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR + A PSSSREP     SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 183 VLRPQLAEPSSSREP----TSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 231

[Close]

BLAST of CmUC02G048390 vs. ExPASy TrEMBL
Match: A0A0A0KK15 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.8e-84
Identity = 163/177 (92.09%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+E
Sbjct: 103 ATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIE 162

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYDDPEDDQYY   PYEDD+EE EDAYLG SPSLRIGNRRWG NGYVRAGRQEARP
Sbjct: 163 EREETYDDPEDDQYY---PYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARP 222

Query: 139 VLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR EF GPSSSREPVTK A SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 223 VLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of CmUC02G048390 vs. ExPASy TrEMBL
Match: A0A5D3B8D7 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00750 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.2e-83
Identity = 162/177 (91.53%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI E
Sbjct: 103 ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFE 162

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYD+PEDDQYY    YEDD+EE EDAYLG SPSLRIGNRRWG NGYVRAGRQEARP
Sbjct: 163 EREETYDEPEDDQYY---HYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARP 222

Query: 139 VLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 195
           VLR EF  GPSSSR+PVTK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 223 VLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of CmUC02G048390 vs. ExPASy TrEMBL
Match: A0A1S4DXR5 (uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80
Identity = 157/172 (91.28%), Postives = 160/172 (93.02%), Query Frame = 0


Query: 19  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVE 78
           ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI E
Sbjct: 103 ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFE 162

Query: 79  EREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARP 138
           EREETYD+PEDDQYY    YEDD+EE EDAYLG SPSLRIGNRRWG NGYVRAGRQEARP
Sbjct: 163 EREETYDEPEDDQYY---HYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARP 222

Query: 139 VLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLA 190
           VLR EF  GPSSSR+PVTK ASKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 223 VLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLA 271

[Close]

BLAST of CmUC02G048390 vs. ExPASy TrEMBL
Match: A0A6J1FXD4 (uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC111448431 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.6e-80
Identity = 153/173 (88.44%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 20  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEE 79
           TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWY+PLIV++
Sbjct: 71  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYEPLIVKD 130

Query: 80  REETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARPV 139
           REETYDDPE+     Y PYED +EE E+AYLG SPSLRIGNRRWGDNGYVRAGRQEARPV
Sbjct: 131 REETYDDPEE-----YYPYEDQDEELEEAYLGASPSLRIGNRRWGDNGYVRAGRQEARPV 190

Query: 140 LRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 193
           LR EF+G SSSREP TK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
Sbjct: 191 LRPEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 238

[Close]

BLAST of CmUC02G048390 vs. ExPASy TrEMBL
Match: A0A6J1JFP2 (uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 153/173 (88.44%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 20  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEE 79
           TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWY+PLIV++
Sbjct: 70  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYEPLIVKD 129

Query: 80  REETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARPV 139
           REETYDDPE+     Y PYED +EE E+AYLG SPSLRIGNRRWGDNGYVRAGRQEARPV
Sbjct: 130 REETYDDPEE-----YYPYEDQDEELEEAYLGDSPSLRIGNRRWGDNGYVRAGRQEARPV 189

Query: 140 LRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 193
           LR EF+G SSSREP TK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
Sbjct: 190 LRPEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 237

[Close]

BLAST of CmUC02G048390 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-50
Identity = 113/187 (60.43%), Postives = 134/187 (71.66%), Query Frame = 0


Query: 20  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEE 79
           TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL V E
Sbjct: 71  TCILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVE 130

Query: 80  REETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARPV 139
           +        DD   PYD YED++++ ++ YL  S SLRIGNRRWG NG+VR+GRQEARPV
Sbjct: 131 QASYSHGYHDDFDIPYD-YEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEARPV 190

Query: 140 LR-------SEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKA----AAAKHQEH 195
            R       S  +  SSS EP  K   + + TGRRAKRA+KREAA+KA    AAAKH+ H
Sbjct: 191 QRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAH 250

[Close]

BLAST of CmUC02G048390 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-50
Identity = 113/187 (60.43%), Postives = 134/187 (71.66%), Query Frame = 0


Query: 20  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEE 79
           TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL V E
Sbjct: 56  TCILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVE 115

Query: 80  REETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARPV 139
           +        DD   PYD YED++++ ++ YL  S SLRIGNRRWG NG+VR+GRQEARPV
Sbjct: 116 QASYSHGYHDDFDIPYD-YEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEARPV 175

Query: 140 LR-------SEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKA----AAAKHQEH 195
            R       S  +  SSS EP  K   + + TGRRAKRA+KREAA+KA    AAAKH+ H
Sbjct: 176 QRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAH 235

[Close]

BLAST of CmUC02G048390 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 107/188 (56.91%), Postives = 133/188 (70.74%), Query Frame = 0


Query: 20  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEE 79
           TCILRWASY +KPTCPQCK PF+FL VHR+LDGS+ D+MFEESVCLLLRASW++PL   E
Sbjct: 68  TCILRWASYKEKPTCPQCKLPFDFLNVHRALDGSVEDFMFEESVCLLLRASWFQPLEAVE 127

Query: 80  REETYDDPEDDQYYP--YDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEAR 139
           R    D+   D   P  Y+  ++D+++ ++ Y+  S SLR+GNRRWGDNG+VRAGRQEAR
Sbjct: 128 RVSDNDNFNYDFDIPPEYEEEDEDDDDLDEFYMQGS-SLRLGNRRWGDNGFVRAGRQEAR 187

Query: 140 PVLRSEFAGPSSSREPVTKHASKDK-------TGRRAKRALKREAADKA----AAAKHQE 195
           PV      G +S  EP +  + + K       TGRRAKRA+KREAA+KA    AAAKH+ 
Sbjct: 188 PVQHKNRGGQASGSEPASSSSCEPKEKTSSAITGRRAKRAMKREAANKAAEAVAAAKHEA 247

The following BLAST results are available for this feature:

BLAST of CmUC02G048390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657615.1	7.8e-84	92.09	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]	[more]
XP_004140197.1	7.8e-84	92.09	uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hy...	[more]
TYJ96112.1	8.6e-83	91.53	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_038901112.1	2.3e-80	89.77	uncharacterized protein LOC120088112 isoform X1 [Benincasa hispida]	[more]
XP_038901113.1	2.3e-80	89.77	E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida]	[more]

BLAST of CmUC02G048390 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G048390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK15	3.8e-84	92.09	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 P...	[more]
A0A5D3B8D7	4.2e-83	91.53	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S4DXR5	3.3e-80	91.28	uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=...	[more]
A0A6J1FXD4	9.6e-80	88.44	uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JFP2	2.1e-79	88.44	uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597...	[more]

BLAST of CmUC02G048390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	4.6e-50	60.43	RING/U-box superfamily protein	[more]
AT5G19430.2	4.6e-50	60.43	RING/U-box superfamily protein	[more]
AT5G12310.1	1.9e-48	56.91	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..194
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 19..194
None	No IPR available	PANTHER	PTHR47361:SF4	RING/U-BOX SUPERFAMILY PROTEIN	coord: 19..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G048390.1	CmUC02G048390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding