CmUC02G046490 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G046490
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	LOB domain-containing protein
Location	CmU531Chr02: 34196762 .. 34198199 (+)
RNA-Seq Expression	CmUC02G046490
Synteny	CmUC02G046490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATATCTCTGTTTTTCCCTTTGCAAACTCCAAACCCACTCTTCTTCTTCTTCGTTTTTTTTTTTTTGGCTCCGATTCGTCTGAAATGGAAGGGAGTGATTCAATCGCCACCGTTTCATCAACTCCGCTATCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCGCCGCCGCCCGTCGTTCTCAGTCCATGTGCGGCCTGCAAGATTTTGAGACGGCGATGTGCCGAACGATGTGTTTTGGCGCCTTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAATTCTTGCAGGTCTTTTTCATCTGCCTTTTAATTTCTCTGAATTCCTGATTTCTGTTTTACTTCAACTCTGAATTTTTAACTGTTTGGTTAGTTTGAAGATTGAATCAAATGAATTAGGGCTGAAAATGTGCATTGATTTGTTACAAACTAACGACCTTGTTGCAATGGGATTTGGAGTATGAAGTTTCTTAAAATCGTCTTTTCTTAAGATTTTTGTTGAAAGAGCCGCCGTAAATTATATGAGACATTTCTTTCTAACATTTTGTTTGATCCTAAACTTTCTTCATCATATCTTTTCAGCCACTTAACCTACTAAACTTTACACTATGTTTCTGTTAACATTGTTCACCTTATTTGTAATACAAAATAAATTTTCAAAGTGTGGAAGTTTGAAAAAGTAGTATTCTCAGACCAACTCAAAAGTTAAGCCTGATGGGATTTTCATTTCTCATTTTCCTCTATATGAATAGTTAAATTTACAACACAAGAAGAGCTCTCTGCAAAAACCCATTTGTCATGAACTGAAATTTCTCTTGGGTCATTGATTAAACAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGGTTGTGAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATGGCTTATTATTCCAGAGCATCAGCCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGAATCATCTGACCTTTCTTTTTTTAGTGTATGCATTTAAGGTGTTTGATAAAATGTTCCGATGAAGTTTCTCCAAACTTTTAAGCCAATTTGTGGTTGTGGGTAGGAGAAACTTTGTGGAAAATACAACAGAAATCTAGTTTCTTGTTATGATTAAATTACTAATGAAATGGACAAAAACAAAAGGAGGGAAACCAAAGCTTTATTAGGGATATGTCTT

mRNA sequence

TTTATATCTCTGTTTTTCCCTTTGCAAACTCCAAACCCACTCTTCTTCTTCTTCGTTTTTTTTTTTTTGGCTCCGATTCGTCTGAAATGGAAGGGAGTGATTCAATCGCCACCGTTTCATCAACTCCGCTATCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCGCCGCCGCCCGTCGTTCTCAGTCCATGTGCGGCCTGCAAGATTTTGAGACGGCGATGTGCCGAACGATGTGTTTTGGCGCCTTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAATTCTTGCAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGGTTGTGAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATGGCTTATTATTCCAGAGCATCAGCCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGAATCATCTGACCTTTCTTTTTTTAGTGTATGCATTTAAGGTGTTTGATAAAATGTTCCGATGAAGTTTCTCCAAACTTTTAAGCCAATTTGTGGTTGTGGGTAGGAGAAACTTTGTGGAAAATACAACAGAAATCTAGTTTCTTGTTATGATTAAATTACTAATGAAATGGACAAAAACAAAAGGAGGGAAACCAAAGCTTTATTAGGGATATGTCTT

Coding sequence (CDS)

ATGGAAGGGAGTGATTCAATCGCCACCGTTTCATCAACTCCGCTATCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCGCCGCCGCCCGTCGTTCTCAGTCCATGTGCGGCCTGCAAGATTTTGAGACGGCGATGTGCCGAACGATGTGTTTTGGCGCCTTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAATTCTTGCAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGGTTGTGAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATGGCTTATTATTCCAGAGCATCAGCCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGA

Protein sequence

MEGSDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPSYFDDSNVNSLWEPLWT

Homology

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BLAST of CmUC02G046490 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 357.5 bits (916), Expect = 7.6e-95
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MEGSDSIATVSSTPLSQSPSSSSSPAP-PPPVVLSPCAACKILRRRCAERCVLAPYFPPT 60
           MEGSDS+ TVSSTPLSQSPSSSSS AP PPPVVLSPCAACKILRRRCAERCVLAPYFPPT
Sbjct: 1   MEGSDSVTTVSSTPLSQSPSSSSSLAPSPPPVVLSPCAACKILRRRCAERCVLAPYFPPT 60

Query: 61  EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQK 120
           EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQK
Sbjct: 61  EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQK 120

Query: 121 QVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISP 180
           QVNELQAQLAKAQAEVVNMQCQQANLV+FVCRELAQS HQSFDDFNGSPHNG LFQSISP
Sbjct: 121 QVNELQAQLAKAQAEVVNMQCQQANLVSFVCRELAQS-HQSFDDFNGSPHNG-LFQSISP 180

Query: 181 SYFDDSNVNSLWEPLWT 197
           SYFDDSNVNSLWEPLWT
Sbjct: 181 SYFDDSNVNSLWEPLWT 195

[Close]

BLAST of CmUC02G046490 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 187/199 (93.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MEGSDS--IATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I TVSSTPLSQSPSSSSSPAPPPPV+LSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSIS 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS HQSFD+FNGSPHNGLL     
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS-HQSFDEFNGSPHNGLLQSINP 180

Query: 181 PSYFDDS-NVNSLWEPLWT 197
           PSYFDDS NVNSLWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CmUC02G046490 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 6.7e-91
Identity = 178/196 (90.82%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MEGSDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTE 60
           MEGSDSI T+SSTP SQSPSSSSSPAPPPPVVLSPCAACKILRRRCAE CVLAPYFPPTE
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPS 180
           VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSH  SFDD N   H+GL     SPS
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISSPS 180

Query: 181 YFDDSNVNSLWEPLWT 197
           YFDD+NVN LWEPLWT
Sbjct: 181 YFDDTNVNPLWEPLWT 196

[Close]

BLAST of CmUC02G046490 vs. NCBI nr
Match: XP_004149555.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical protein Csa_022951 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 184/201 (91.54%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MEGSDSI--ATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD+I   TVSSTPLSQSPSSSSSPAPPPPV+LSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSP--HNGLLFQS 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS HQSFD+FNGSP  HNGLL   
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS-HQSFDEFNGSPQSHNGLLQSI 180

Query: 181 ISPSYFDDS-NVNSLWEPLWT 197
             PSYFDDS NVNSLWEPLWT
Sbjct: 181 HPPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of CmUC02G046490 vs. NCBI nr
Match: XP_023512010.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 181/197 (91.88%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MEGSDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTE 60
           MEGSDSI T+SSTP S SPSSSSSPAPPPPVVLSPCAACKILRRRCAE CVLAPYFPPTE
Sbjct: 1   MEGSDSIITLSSTPPSPSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSI-SP 180
           VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSH  SFDD N   H+G LFQSI SP
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSG-LFQSISSP 180

Query: 181 SYFDDSNVNSLWEPLWT 197
           SYFDD+NVN LWEPLWT
Sbjct: 181 SYFDDTNVNPLWEPLWT 196

[Close]

BLAST of CmUC02G046490 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.1e-55
Identity = 124/197 (62.94%), Postives = 146/197 (74.11%), Query Frame = 0


Query: 4   SDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTEPAK 63
           S S A+V++TP+  S SSS  P+  P VVLSPCAACKILRRRCAERCVLAPYFPPT+PAK
Sbjct: 3   SKSDASVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAK 62

Query: 64  FAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNE 123
           F IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+E
Sbjct: 63  FTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSE 122

Query: 124 LQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPSYFD 183
           LQAQLAKAQ E+VNMQ Q++NL+  +          + D       + + F+S    + +
Sbjct: 123 LQAQLAKAQVEMVNMQFQRSNLLELI---------YNMDQQQKQEQDNMSFESNDLGFLE 182

Query: 184 D-SNVNS---LWEPLWT 197
           D SN NS    W+PLWT
Sbjct: 183 DKSNTNSSMLWWDPLWT 189

[Close]

BLAST of CmUC02G046490 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 4.4e-53
Identity = 124/216 (57.41%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 9   TVSSTPLSQSPSSSSSPAPP--------PPVVLSPCAACKILRRRCAERCVLAPYFPPTE 68
           T ++TP++ SPS +SSP PP        PPVVLSPCAACKILRRRCA++CVLAPYFPPT+
Sbjct: 22  TETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTD 81

Query: 69  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 128
           PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+Q
Sbjct: 82  PAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQ 141

Query: 129 VNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQ------SHHQSFDDFN 188
           V+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q      S  +S D+F 
Sbjct: 142 VSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFI 201

Query: 189 GSPHNGLLFQSISPSYFDDSNVN-----SLWEPLWT 197
            SP      +S    + +D+N N     S W+PLWT
Sbjct: 202 SSPDE----ESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CmUC02G046490 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 5.7e-37
Identity = 84/156 (53.85%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 34  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 93
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 153
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 154 AQSHHQSFDDFNGSPHNGLLFQSISPSYFDDSNVNS 190
            QSHHQ  +      H  LL  + + +  + +N N+
Sbjct: 127 LQSHHQVLE--LDQDHKALLLNNNNINNCNTNNNNN 152

[Close]

BLAST of CmUC02G046490 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36
Identity = 90/170 (52.94%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 34  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 93
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 153
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+    F    L
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS--TNFPGHGL 131

Query: 154 AQSHHQSFDDFNGSPHNGLLFQSISP-------SYFDDSNVNSLWEPLWT 197
                 S    +GSP +    + +SP       S+ D  +  SL E +W+
Sbjct: 132 CPDSPSS----SGSPSS----KQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of CmUC02G046490 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 25  PAPPPPVVL---SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQ 84
           P   PP  L   +PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L 
Sbjct: 32  PMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLM 91

Query: 85  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQ 144
           E+PESQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + +
Sbjct: 92  EVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQR 151

[Close]

BLAST of CmUC02G046490 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.9e-93
Identity = 187/199 (93.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MEGSDS--IATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I TVSSTPLSQSPSSSSSPAPPPPV+LSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSIS 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS HQSFD+FNGSPHNGLL     
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS-HQSFDEFNGSPHNGLLQSINP 180

Query: 181 PSYFDDS-NVNSLWEPLWT 197
           PSYFDDS NVNSLWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CmUC02G046490 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.9e-93
Identity = 187/199 (93.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MEGSDS--IATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I TVSSTPLSQSPSSSSSPAPPPPV+LSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSIS 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS HQSFD+FNGSPHNGLL     
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS-HQSFDEFNGSPHNGLLQSINP 180

Query: 181 PSYFDDS-NVNSLWEPLWT 197
           PSYFDDS NVNSLWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CmUC02G046490 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91
Identity = 178/196 (90.82%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MEGSDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTE 60
           MEGSDSI T+SSTP SQSPSSSSSPAPPPPVVLSPCAACKILRRRCAE CVLAPYFPPTE
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPS 180
           VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSH  SFDD N   H+GL     SPS
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISSPS 180

Query: 181 YFDDSNVNSLWEPLWT 197
           YFDD+NVN LWEPLWT
Sbjct: 181 YFDDTNVNPLWEPLWT 196

[Close]

BLAST of CmUC02G046490 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91
Identity = 178/196 (90.82%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MEGSDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTE 60
           MEGSDSI T+SSTP SQSPSSSSSPAPPPPVVLSPCAACKILRRRCAE CVLAPYFPPTE
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPS 180
           VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSH  SFDD N   H+GL     SPS
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISSPS 180

Query: 181 YFDDSNVNSLWEPLWT 197
           YFDD+NVN LWEPLWT
Sbjct: 181 YFDDTNVNPLWEPLWT 196

[Close]

BLAST of CmUC02G046490 vs. ExPASy TrEMBL
Match: A0A0A0KCM5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 184/201 (91.54%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MEGSDSI--ATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD+I   TVSSTPLSQSPSSSSSPAPPPPV+LSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSP--HNGLLFQS 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS HQSFD+FNGSP  HNGLL   
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQS-HQSFDEFNGSPQSHNGLLQSI 180

Query: 181 ISPSYFDDS-NVNSLWEPLWT 197
             PSYFDDS NVNSLWEPLWT
Sbjct: 181 HPPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of CmUC02G046490 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 215.3 bits (547), Expect = 4.3e-56
Identity = 124/197 (62.94%), Postives = 146/197 (74.11%), Query Frame = 0


Query: 4   SDSIATVSSTPLSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTEPAK 63
           S S A+V++TP+  S SSS  P+  P VVLSPCAACKILRRRCAERCVLAPYFPPT+PAK
Sbjct: 3   SKSDASVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAK 62

Query: 64  FAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNE 123
           F IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+E
Sbjct: 63  FTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSE 122

Query: 124 LQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPSYFD 183
           LQAQLAKAQ E+VNMQ Q++NL+  +          + D       + + F+S    + +
Sbjct: 123 LQAQLAKAQVEMVNMQFQRSNLLELI---------YNMDQQQKQEQDNMSFESNDLGFLE 182

Query: 184 D-SNVNS---LWEPLWT 197
           D SN NS    W+PLWT
Sbjct: 183 DKSNTNSSMLWWDPLWT 189

[Close]

BLAST of CmUC02G046490 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 209.1 bits (531), Expect = 3.1e-54
Identity = 124/216 (57.41%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 9   TVSSTPLSQSPSSSSSPAPP--------PPVVLSPCAACKILRRRCAERCVLAPYFPPTE 68
           T ++TP++ SPS +SSP PP        PPVVLSPCAACKILRRRCA++CVLAPYFPPT+
Sbjct: 22  TETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTD 81

Query: 69  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 128
           PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+Q
Sbjct: 82  PAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQ 141

Query: 129 VNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQ------SHHQSFDDFN 188
           V+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q      S  +S D+F 
Sbjct: 142 VSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFI 201

Query: 189 GSPHNGLLFQSISPSYFDDSNVN-----SLWEPLWT 197
            SP      +S    + +D+N N     S W+PLWT
Sbjct: 202 SSPDE----ESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CmUC02G046490 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-38
Identity = 84/156 (53.85%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 34  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 93
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 153
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 154 AQSHHQSFDDFNGSPHNGLLFQSISPSYFDDSNVNS 190
            QSHHQ  +      H  LL  + + +  + +N N+
Sbjct: 127 LQSHHQVLE--LDQDHKALLLNNNNINNCNTNNNNN 152

[Close]

BLAST of CmUC02G046490 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37
Identity = 90/170 (52.94%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 34  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 93
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 153
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+    F    L
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS--TNFPGHGL 131

Query: 154 AQSHHQSFDDFNGSPHNGLLFQSISP-------SYFDDSNVNSLWEPLWT 197
                 S    +GSP +    + +SP       S+ D  +  SL E +W+
Sbjct: 132 CPDSPSS----SGSPSS----KQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of CmUC02G046490 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32
Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 25  PAPPPPVVL---SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQ 84
           P   PP  L   +PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L 
Sbjct: 32  PMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLM 91

Query: 85  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQ 144
           E+PESQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + +
Sbjct: 92  EVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQR 151

The following BLAST results are available for this feature:

BLAST of CmUC02G046490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902542.1	7.6e-95	96.45	LOB domain-containing protein 1 [Benincasa hispida]	[more]
XP_008463908.1	1.2e-92	93.97	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB...	[more]
XP_022943961.1	6.7e-91	90.82	LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB do...	[more]
XP_004149555.1	3.3e-90	91.54	LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical prote...	[more]
XP_023512010.1	3.3e-90	91.88	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC02G046490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	6.1e-55	62.94	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	4.4e-53	57.41	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	5.7e-37	53.85	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	3.7e-36	52.94	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	2.1e-31	57.38	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of CmUC02G046490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSE3	5.9e-93	93.97	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CKA7	5.9e-93	93.97	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=...	[more]
A0A6J1J8I0	3.2e-91	90.82	LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3...	[more]
A0A6J1FT49	3.2e-91	90.82	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]
A0A0A0KCM5	1.6e-90	91.54	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV...	[more]

BLAST of CmUC02G046490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	4.3e-56	62.94	LOB domain-containing protein 1	[more]
AT2G28500.1	3.1e-54	57.41	LOB domain-containing protein 11	[more]
AT2G30130.1	4.1e-38	53.85	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	2.6e-37	52.94	LOB domain-containing protein 4	[more]
AT2G40470.1	1.5e-32	57.38	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31301:SF141	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 11..193
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 11..193
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 35..132 e-value: 3.7E-41 score: 139.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 34..135 score: 26.143148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G046490.1	CmUC02G046490.1	mRNA