CmUC02G040580 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G040580
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CmU531Chr02: 28387423 .. 28389761 (-)
RNA-Seq Expression	CmUC02G040580
Synteny	CmUC02G040580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGCCCTAACCATTTTCTCTCTGTTCTCGGAGAAATTCCAGTCGATGTCTTTCGAGTGAGAAACATGAACGTTATCATTCGCCTCTCGTCAGCGTCGAGAATTTTCCCGGGGAAAATTGATCGGAAACCCATTTTCTCGACGACCTATCTTCCGTTCTGCACTTACAATTCAACCTATACGGCTCCCACATCGAACGATTTCGACCCACTAATCATCTCAGACCTCATTTCCAGGCAACAATGGTCAAACCTCAAATCCCATTTCAAATTCGAAAGTCCCATCGATTTTCTTCACCAGTTGCTCGGTTCGGGAGTCGTCGACCCGTTACTTGTGCTCAGGTACTTCAATTGGTCCCAGAAAGAGCTTAAAGTTAATTACAACATCGAACTCTTTTGCAGACTCTTAAATTTATTGGCCAATGCTAAATATTACCCCAAAATTCGATCATTTCTCGATTCTTTTGTAAAGGGTGAAACAAATTACTCGATTTCTTTGATTTTTCATACGCTTTCGGTGTGTAGTGACCAATTTTGTGCTAATTCGATAATTGCTGATATGTTGGTGTTAGCTTATGTGAAAAATTCGAAAACAATCTTTGGATTGGAGGCATTTAAGAGAGCTGGTGATTACGGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTGGCTTGGTGAAGGAGAATGAATTTGGGGATGTGGAATTTGTCTATAAAGAGATGATTAGAAGGAAAATTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTATGTAAGGTTGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGACTCTGGCCCAATGTGGTTACTTACAACACTCTCATTGATGGATATTGTAAAATGGGTAGGGCTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGTCCAAATGATGTAACTTTTAATATATTGATTGATGGGTTTTGTAAAGATGAAAATGTATCGGCTGCGTTGAGGGTGTTTAAGGAAATGCAGAGTCAGGGTCTGAAGCCTAATGTAGTAACATACAATTCCTTAATTAATGGTTTGTGCAATGAAGGAAAACTGAATGAGGCAAAAGTTTTGGTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTCATTACTTATAATGCCCTGATTAATGGGTATTGTAAGAAGAAGTTGTTGGAGGAAGCTAGGGAGTTGTTTGATAATATTGGAAAACAAGGGCTGGCTCCCAATGTTAAAACATTCAATACATTACTTGATGGATATTGCAAATGTGGGAAGATGGAAGAGGCATTTTTGCTGCAGAATTTAATGTTAGAGAAAGGATTTCTCCCAGATGTCTCAACCTACAATTGCCTTATCGTTGGTTTTTGTAGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGGGACGTAGAGGTCTGAAAGCAGATACAGTGACGTACAATATTTTGGTAAGTGCATGGTGTGAGAAAAGGGAGCCGAAAAAGGCAGCACGACTCATCGATGAGATGCTTGACAGGGGATTAAGGCCAAGTCATTTGACATATAACATTTTGTTGAATGGCTATTGTATGGAAGGAAACTTAAGGGCTGCTTTGAATGTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCTAATGTGGCTACGTATAATGTGTTGATTCAAGGTTATTGTAGAAAGGGAAAATTGGAAGATGCAAATAGGCTTCTTAATGAGATGCTGGAGAAGGGATTAATTCCGAATCGTACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTCCCTGATATAGAAGGCCATCTTTATCAAGTCTCCCGCTAGAAGTTAATCAACGATGTCGCAACTGTACCAGTGGAATAAACTGTATGAACTCATAAGTCACCGATCTGGCCGACATGATCAGAGATAGAGGACATTCAAGGTAACTAATATAATCCAGGAGGGGGAACAGCCACCATCTTTAGCATTTGAGAGCTTGCGATGTTGTGTATCTTTAACCTTATGGATGGTATAAAATTTAATCGATCAGTTTAATGTAGTAGTCAATTCTTATGCTGATGCTGATAATACCTTCTTCATTGTTTACAGAATAATGCTCCATGGAGCATCATAGCATGCTTCTTCTTTCCCTTGTCATCTAATTACCTTACAGCTCGCTATATTATGTCCTCGATGTGCTTATTGCATAATTATTTTTTTTCTCATCATTGTTACAGGACTGGTGATCTACTGATCGGCTATAATCCCTACTTGGGATGA

mRNA sequence

CTTGCCCTAACCATTTTCTCTCTGTTCTCGGAGAAATTCCAGTCGATGTCTTTCGAGTGAGAAACATGAACGTTATCATTCGCCTCTCGTCAGCGTCGAGAATTTTCCCGGGGAAAATTGATCGGAAACCCATTTTCTCGACGACCTATCTTCCGTTCTGCACTTACAATTCAACCTATACGGCTCCCACATCGAACGATTTCGACCCACTAATCATCTCAGACCTCATTTCCAGGCAACAATGGTCAAACCTCAAATCCCATTTCAAATTCGAAAGTCCCATCGATTTTCTTCACCAGTTGCTCGGTTCGGGAGTCGTCGACCCGTTACTTGTGCTCAGGTACTTCAATTGGTCCCAGAAAGAGCTTAAAGTTAATTACAACATCGAACTCTTTTGCAGACTCTTAAATTTATTGGCCAATGCTAAATATTACCCCAAAATTCGATCATTTCTCGATTCTTTTGTAAAGGGTGAAACAAATTACTCGATTTCTTTGATTTTTCATACGCTTTCGGTGTGTAGTGACCAATTTTGTGCTAATTCGATAATTGCTGATATGTTGGTGTTAGCTTATGTGAAAAATTCGAAAACAATCTTTGGATTGGAGGCATTTAAGAGAGCTGGTGATTACGGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTGGCTTGGTGAAGGAGAATGAATTTGGGGATGTGGAATTTGTCTATAAAGAGATGATTAGAAGGAAAATTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTATGTAAGGTTGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGACTCTGGCCCAATGTGGTTACTTACAACACTCTCATTGATGGATATTGTAAAATGGGTAGGGCTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGTCCAAATGATGTAACTTTTAATATATTGATTGATGGGTTTTGTAAAGATGAAAATGTATCGGCTGCGTTGAGGGTGTTTAAGGAAATGCAGAGTCAGGGTCTGAAGCCTAATGTAGTAACATACAATTCCTTAATTAATGGTTTGTGCAATGAAGGAAAACTGAATGAGGCAAAAGTTTTGGTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTCATTACTTATAATGCCCTGATTAATGGGTATTGTAAGAAGAAGTTGTTGGAGGAAGCTAGGGAGTTGTTTGATAATATTGGAAAACAAGGGCTGGCTCCCAATGTTAAAACATTCAATACATTACTTGATGGATATTGCAAATGTGGGAAGATGGAAGAGGCATTTTTGCTGCAGAATTTAATGTTAGAGAAAGGATTTCTCCCAGATGTCTCAACCTACAATTGCCTTATCGTTGGTTTTTGTAGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGGGACGTAGAGGTCTGAAAGCAGATACAGTGACGTACAATATTTTGGTAAGTGCATGGTGTGAGAAAAGGGAGCCGAAAAAGGCAGCACGACTCATCGATGAGATGCTTGACAGGGGATTAAGGCCAAGTCATTTGACATATAACATTTTGTTGAATGGCTATTGTATGGAAGGAAACTTAAGGGCTGCTTTGAATGTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCTAATGTGGCTACGTATAATGTGTTGATTCAAGGTTATTGTAGAAAGGGAAAATTGGAAGATGCAAATAGGCTTCTTAATGAGATGCTGGAGAAGGGATTAATTCCGAATCGTACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTCCCTGATATAGAAGGCCATCTTTATCAAGAGGGGGAACAGCCACCATCTTTAGCATTTGAGAGCTTGCGATGTTGTGTATCTTTAACCTTATGGATGAATAATGCTCCATGGAGCATCATAGCATGGACTGGTGATCTACTGATCGGCTATAATCCCTACTTGGGATGA

Coding sequence (CDS)

ATGAACGTTATCATTCGCCTCTCGTCAGCGTCGAGAATTTTCCCGGGGAAAATTGATCGGAAACCCATTTTCTCGACGACCTATCTTCCGTTCTGCACTTACAATTCAACCTATACGGCTCCCACATCGAACGATTTCGACCCACTAATCATCTCAGACCTCATTTCCAGGCAACAATGGTCAAACCTCAAATCCCATTTCAAATTCGAAAGTCCCATCGATTTTCTTCACCAGTTGCTCGGTTCGGGAGTCGTCGACCCGTTACTTGTGCTCAGGTACTTCAATTGGTCCCAGAAAGAGCTTAAAGTTAATTACAACATCGAACTCTTTTGCAGACTCTTAAATTTATTGGCCAATGCTAAATATTACCCCAAAATTCGATCATTTCTCGATTCTTTTGTAAAGGGTGAAACAAATTACTCGATTTCTTTGATTTTTCATACGCTTTCGGTGTGTAGTGACCAATTTTGTGCTAATTCGATAATTGCTGATATGTTGGTGTTAGCTTATGTGAAAAATTCGAAAACAATCTTTGGATTGGAGGCATTTAAGAGAGCTGGTGATTACGGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTGGCTTGGTGAAGGAGAATGAATTTGGGGATGTGGAATTTGTCTATAAAGAGATGATTAGAAGGAAAATTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTATGTAAGGTTGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGACTCTGGCCCAATGTGGTTACTTACAACACTCTCATTGATGGATATTGTAAAATGGGTAGGGCTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGTCCAAATGATGTAACTTTTAATATATTGATTGATGGGTTTTGTAAAGATGAAAATGTATCGGCTGCGTTGAGGGTGTTTAAGGAAATGCAGAGTCAGGGTCTGAAGCCTAATGTAGTAACATACAATTCCTTAATTAATGGTTTGTGCAATGAAGGAAAACTGAATGAGGCAAAAGTTTTGGTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTCATTACTTATAATGCCCTGATTAATGGGTATTGTAAGAAGAAGTTGTTGGAGGAAGCTAGGGAGTTGTTTGATAATATTGGAAAACAAGGGCTGGCTCCCAATGTTAAAACATTCAATACATTACTTGATGGATATTGCAAATGTGGGAAGATGGAAGAGGCATTTTTGCTGCAGAATTTAATGTTAGAGAAAGGATTTCTCCCAGATGTCTCAACCTACAATTGCCTTATCGTTGGTTTTTGTAGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGGGACGTAGAGGTCTGAAAGCAGATACAGTGACGTACAATATTTTGGTAAGTGCATGGTGTGAGAAAAGGGAGCCGAAAAAGGCAGCACGACTCATCGATGAGATGCTTGACAGGGGATTAAGGCCAAGTCATTTGACATATAACATTTTGTTGAATGGCTATTGTATGGAAGGAAACTTAAGGGCTGCTTTGAATGTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCTAATGTGGCTACGTATAATGTGTTGATTCAAGGTTATTGTAGAAAGGGAAAATTGGAAGATGCAAATAGGCTTCTTAATGAGATGCTGGAGAAGGGATTAATTCCGAATCGTACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTCCCTGATATAGAAGGCCATCTTTATCAAGAGGGGGAACAGCCACCATCTTTAGCATTTGAGAGCTTGCGATGTTGTGTATCTTTAACCTTATGGATGAATAATGCTCCATGGAGCATCATAGCATGGACTGGTGATCTACTGATCGGCTATAATCCCTACTTGGGATGA

Protein sequence

MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQWSNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANAKYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYQEGEQPPSLAFESLRCCVSLTLWMNNAPWSIIAWTGDLLIGYNPYLG

Homology

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BLAST of CmUC02G040580 vs. NCBI nr
Match: XP_038891207.1 (pentatricopeptide repeat-containing protein At1g09820 [Benincasa hispida])

HSP 1 Score: 1150.6 bits (2975), Expect = 0.0e+00
Identity = 561/608 (92.27%), Postives = 583/608 (95.89%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIR+SS S IFP KI RK IFSTTYLPFCTYNST TAPTSND DPLIISDLISRQQW
Sbjct: 1   MNVIIRISSTSTIFPVKIYRKFIFSTTYLPFCTYNSTCTAPTSNDSDPLIISDLISRQQW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSHFKF+SP+DFLHQLLGSG VDPLLVLRYFNWSQKELKVNYNIELFCRL++LLANA
Sbjct: 61  STLKSHFKFKSPVDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELFCRLIHLLANA 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           K YPKIRSFLDSFVKGETN SISLIFHTLSVCSDQFCANSIIAD+LVLAYVKNSKT+ GL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCSISLIFHTLSVCSDQFCANSIIADILVLAYVKNSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYGYKLSVLSCNPLLS LVKENEFGD+EFVYKEMIRRK++PNLITFNIVINGL
Sbjct: 181 EAFKRAGDYGYKLSVLSCNPLLSALVKENEFGDMEFVYKEMIRRKVNPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPNVVTYNTLIDGYCKMG+ GKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGKVGKMYKADAILKEMVANKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PNDVTFN LIDGFCKDENV AAL+VF+EMQSQGLKP VVTYNSLINGLCNEGKLNEAKVL
Sbjct: 301 PNDVTFNTLIDGFCKDENVLAALKVFEEMQSQGLKPTVVTYNSLINGLCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +D MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI KQGLAPNV TFNTLLDGYCK
Sbjct: 361 LDGMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIRKQGLAPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKMEEAFLLQNLMLEKGFLPD+STYNCLIVGFCREGKMEEVK LLNEM RRG+KADTVT
Sbjct: 421 CGKMEEAFLLQNLMLEKGFLPDISTYNCLIVGFCREGKMEEVKKLLNEMERRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEKREPKKAARL+DEML+RGL+PSHLT+NILLNGYCMEGNLRAALNVRKQME
Sbjct: 481 YNILISAWCEKREPKKAARLVDEMLERGLQPSHLTFNILLNGYCMEGNLRAALNVRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KEGRWANV TYNVLIQGYCRKGKLEDAN LLNEMLEKGLIPN+TTYEIIKEEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNQTTYEIIKEEMMEKGFLP 600

Query: 601 DIEGHLYQ 609
           DIEGHLYQ
Sbjct: 601 DIEGHLYQ 608

[Close]

BLAST of CmUC02G040580 vs. NCBI nr
Match: XP_004144813.1 (pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >XP_031736876.1 pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >KGN61033.2 hypothetical protein Csa_021337 [Cucumis sativus])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 547/611 (89.53%), Postives = 573/611 (93.78%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIR SSASRIFP KIDR  IFSTT+LPFCTYN T TAP SNDFDPLIISDLISRQQW
Sbjct: 1   MNVIIRHSSASRIFPAKIDRNCIFSTTHLPFCTYNPTCTAPISNDFDPLIISDLISRQQW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSH KF+SPIDFLHQL+GSG VDPLLVLRYFNWS++EL VNY+IEL CRLLNLLANA
Sbjct: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANA 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           K+YPKIRS LDSFVKGETN SISLIFH+LSVCS QFCANSIIADMLVLAYV+NSKT+ GL
Sbjct: 121 KHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLS LVKENEFG VEFVYKEMIRRKISPNLITFN VINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDV+DDMKVWG WPNVVTYNTLIDGYCKMGR GKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PN VTFN+LIDGFCKDEN+SAAL+VF+EMQSQGLKP VVTYNSL+NGLCNEGKLNEAKVL
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL PNV TFNTLL GYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
            GKMEEAFLLQ +MLEKGFLP+ STYNCLIVGFCREGKMEEVKNLLNEM  RG+KADTVT
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEK+EPKKAARLIDEMLD+GL+PSHLTYNILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KEGRWANV TYNVLIQGYCRKGKLEDAN LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600

Query: 601 DIEGHLYQEGE 612
           DIEGHLY   +
Sbjct: 601 DIEGHLYHASQ 611

[Close]

BLAST of CmUC02G040580 vs. NCBI nr
Match: TYJ96471.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1119.4 bits (2894), Expect = 0.0e+00
Identity = 549/607 (90.44%), Postives = 572/607 (94.23%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIRLSSASRIFP KIDR  IFSTT+LPFCTYNST TAPTSNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLPFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSH KF+SPIDFLHQL+ SG VDPLLVLRYFNWS++ELKVNY+IEL CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           KYYPKIRS LDSFVKGETN SISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKT+ GL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLS LVKE+E GDVEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEVGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPN VTYNTLIDGYCKMGR GKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PN VTFN+LIDGFCKDENVS AL+VF+EMQSQGLKP VVTYNSLING+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNV TFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM  RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEK+EPKKAARLIDEMLDRGL+PSHLTYNILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANV TYNVLI GYCRKGKLEDAN LLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLY 608
           DIEGHLY
Sbjct: 601 DIEGHLY 607

[Close]

BLAST of CmUC02G040580 vs. NCBI nr
Match: XP_008453581.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Cucumis melo] >KAA0048065.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 549/607 (90.44%), Postives = 572/607 (94.23%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIRLSSASRIFP KIDR  IFSTT+L FCTYNST TAPTSNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSH KF+SPIDFLHQL+ SG VDPLLVLRYFNWS++ELKVNY+IEL CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           KYYPKIRS LDSFVKGETN SISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKT+ GL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLS LVKE+EFGDVEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPN VTYNTLIDGYCKMGR GKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PN VTFN+LIDGFCKDENVS AL+VF+EMQSQGLKP VVTYNSLING+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNV TFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM  RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEK+EPKKAARLIDEMLDRGL+PSHLTYNILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANV TYNVLI GYCRKGKLEDAN LLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLY 608
           DIEGHLY
Sbjct: 601 DIEGHLY 607

[Close]

BLAST of CmUC02G040580 vs. NCBI nr
Match: XP_022156382.1 (pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia] >XP_022156383.1 pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia])

HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 542/608 (89.14%), Postives = 570/608 (93.75%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MN + RL    RIFP KIDRK IFSTT+ P CTYNST TA +SNDFDP IIS+LISRQQW
Sbjct: 1   MNAVNRL--PWRIFPAKIDRKYIFSTTHPPLCTYNSTSTASSSNDFDPQIISELISRQQW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           SNLKSHFKF+SPIDFLH LLGSG VDPLLVLRYFNWSQKELKVNY+IELFCRLLNLLANA
Sbjct: 61  SNLKSHFKFKSPIDFLHLLLGSGAVDPLLVLRYFNWSQKELKVNYSIELFCRLLNLLANA 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           K YPKIRSFLDSFVKGETN +ISLIF+TLSVC DQFCANSIIADMLVLAYVKNSKT  GL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCTISLIFYTLSVCGDQFCANSIIADMLVLAYVKNSKTSLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKR+GDYGYKLSVLSCNPLLS LVKE+EFGDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRSGDYGYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPNVVTYNTLIDGYCKMGR GKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PNDVTFNILIDGFCKDEN+SAAL+VF+EM+ QGLKP+VVTYNSLINGLCNEGKLNEA  L
Sbjct: 301 PNDVTFNILIDGFCKDENISAALKVFEEMRIQGLKPSVVTYNSLINGLCNEGKLNEANTL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEM +SNLKPNV+TYNALINGYCKKKLLEEARELFDNIGKQGLAPNV TFNTLLDGYCK
Sbjct: 361 LDEMSNSNLKPNVVTYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKM+EAFLL++LMLEKG  PDVSTYNCLIVGFC+EGKMEEV+NLLNEM  RGLKAD VT
Sbjct: 421 CGKMDEAFLLRSLMLEKGLPPDVSTYNCLIVGFCKEGKMEEVENLLNEMEERGLKADLVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEKREPKKAA LIDEM  RGLRPSHLTYNILLNGYC+EGNLRAALNVRKQME
Sbjct: 481 YNILISAWCEKREPKKAAGLIDEMFHRGLRPSHLTYNILLNGYCIEGNLRAALNVRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           K+GRWANV TYNVLIQGYCRKGKLEDAN LLNEMLEKGLIPNRTTYEII+EEMMEKGFLP
Sbjct: 541 KDGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIREEMMEKGFLP 600

Query: 601 DIEGHLYQ 609
           DIEGHLYQ
Sbjct: 601 DIEGHLYQ 606

[Close]

BLAST of CmUC02G040580 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.7e-197
Identity = 335/578 (57.96%), Postives = 434/578 (75.09%), Query Frame = 0


Query: 32  CTYNSTYT-APTSNDFDPLIISDLISRQQWSNLKSHFKFESPIDFLHQLLGSGVVDPLLV 91
           C+ +ST T +P    +D  +I+DLI +Q WS L  H    +P +   QL+ S  +DP L 
Sbjct: 26  CSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLI-SSELDPDLC 85

Query: 92  LRYFNWSQKELKVNYNIELFCRLLNLLANAKYYPKIRSFLDSFVKGETNYSISLIFHTLS 151
           LRY++W  K   ++ ++EL  +LL+ LANAK Y KIRSFLD FV+  +++ +  IFH +S
Sbjct: 86  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 145

Query: 152 VCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKENE 211
           +C D  C NSIIADMLVLAY  NS+   G EAFKR+G YGYKLS LSC PL+  L+KEN 
Sbjct: 146 MC-DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 205

Query: 212 FGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTYNT 271
             DVE+VYKEMIRRKI PN+ TFN+VIN LCK GK+NKA DV++DMKV+G  PNVV+YNT
Sbjct: 206 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 265

Query: 272 LIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQ 331
           LIDGYCK+G  GKMYKADA+LKEMV N VSPN  TFNILIDGF KD+N+  +++VFKEM 
Sbjct: 266 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 325

Query: 332 SQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLE 391
            Q +KPNV++YNSLINGLCN GK++EA  + D+M+S+ ++PN+ITYNALING+CK  +L+
Sbjct: 326 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 385

Query: 392 EARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLI 451
           EA ++F ++  QG  P  + +N L+D YCK GK+++ F L+  M  +G +PDV TYNCLI
Sbjct: 386 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 445

Query: 452 VGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLR 511
            G CR G +E  K L +++  +GL  D VT++IL+  +C K E +KAA L+ EM   GL+
Sbjct: 446 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 505

Query: 512 PSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRW-ANVATYNVLIQGYCRKGKLEDANR 571
           P HLTYNI++ GYC EGNL+AA N+R QMEKE R   NVA+YNVL+QGY +KGKLEDAN 
Sbjct: 506 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 565

Query: 572 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 608
           LLNEMLEKGL+PNR TYEI+KEEM+++GF+PDIEGHL+
Sbjct: 566 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600

[Close]

BLAST of CmUC02G040580 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-90
Identity = 187/541 (34.57%), Postives = 288/541 (53.23%), Query Frame = 0


Query: 86  DPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANAKYYPKIRSFLDSFVKGET--NYSIS 145
           D  L+L++ NW+       + +   C  L++L   K Y K    L   V  +T  +   S
Sbjct: 61  DQALILKFLNWANPH--QFFTLRCKCITLHILTKFKLY-KTAQILAEDVAAKTLDDEYAS 120

Query: 146 LIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLS 205
           L+F +L    D   + S + D++V +Y + S     L     A  +G+   VLS N +L 
Sbjct: 121 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 180

Query: 206 GLVK-ENEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLW 265
             ++ +      E V+KEM+  ++SPN+ T+NI+I G C  G ++ A  + D M+  G  
Sbjct: 181 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 240

Query: 266 PNVVTYNTLIDGYCKMG--------------------------------RAGKMYKADAI 325
           PNVVTYNTLIDGYCK+                                 R G+M +   +
Sbjct: 241 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 300

Query: 326 LKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCN 385
           L EM     S ++VT+N LI G+CK+ N   AL +  EM   GL P+V+TY SLI+ +C 
Sbjct: 301 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 360

Query: 386 EGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKT 445
            G +N A   +D+M    L PN  TY  L++G+ +K  + EA  +   +   G +P+V T
Sbjct: 361 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 420

Query: 446 FNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMG 505
           +N L++G+C  GKME+A  +   M EKG  PDV +Y+ ++ GFCR   ++E   +  EM 
Sbjct: 421 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 480

Query: 506 RRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLR 565
            +G+K DT+TY+ L+  +CE+R  K+A  L +EML  GL P   TY  L+N YCMEG+L 
Sbjct: 481 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 540

Query: 566 AALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIK 592
            AL +  +M ++G   +V TY+VLI G  ++ +  +A RLL ++  +  +P+  TY  + 
Sbjct: 541 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 598

[Close]

BLAST of CmUC02G040580 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.8e-82
Identity = 166/515 (32.23%), Postives = 283/515 (54.95%), Query Frame = 0


Query: 110 FCRLLNLLANAKYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLA 169
           F +LL+ +A    +  + S  +       N  IS   +T S+  + FC            
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQM----QNLGISHNLYTYSILINCFC------------ 143

Query: 170 YVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPN 229
             + S+    L    +    GY+  +++ N LL+G    N   D   +  +M+     P+
Sbjct: 144 --RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 203

Query: 230 LITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADA 289
             TFN +I+GL +  + ++A  ++D M V G  P++VTY  +++G CK    G +  A +
Sbjct: 204 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK---RGDIDLALS 263

Query: 290 ILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLC 349
           +LK+M   K+ P  V +N +ID  C  +NV+ AL +F EM ++G++PNVVTYNSLI  LC
Sbjct: 264 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 323

Query: 350 NEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVK 409
           N G+ ++A  L+ +M+   + PNV+T++ALI+ + K+  L EA +L+D + K+ + P++ 
Sbjct: 324 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 383

Query: 410 TFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM 469
           T+++L++G+C   +++EA  +  LM+ K   P+V TYN LI GFC+  +++E   L  EM
Sbjct: 384 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 443

Query: 470 GRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNL 529
            +RGL  +TVTY  L+  + + RE   A  +  +M+  G+ P  +TY+ILL+G C  G +
Sbjct: 444 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 503

Query: 530 RAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEII 589
             AL V + +++     ++ TYN++I+G C+ GK+ED   L   +  KG+ PN  TY  +
Sbjct: 504 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 563

Query: 590 KEEMMEKGFLPDIEG---HLYQEGEQPPSLAFESL 622
                 KG   + +     + +EG  P S  + +L
Sbjct: 564 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577

[Close]

BLAST of CmUC02G040580 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.4e-81
Identity = 164/515 (31.84%), Postives = 285/515 (55.34%), Query Frame = 0


Query: 100 ELKVNYNIELFCRLL-----------NLLANAKYYPKIRSFLDSFVKGETNYSISLIFHT 159
           ++KVN  I+LF  ++           N L +A    K    +  F KG     I    +T
Sbjct: 48  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107

Query: 160 LSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKE 219
           +++              ++  Y +  K +F      RA   GY+   ++ + L++G   E
Sbjct: 108 MTI--------------MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 167

Query: 220 NEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTY 279
               +   +   M+  K  P+L+T + +INGLC  G++++A  +ID M  +G  P+ VTY
Sbjct: 168 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 227

Query: 280 NTLIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKE 339
             +++  CK G +     A  + ++M    +  + V ++I+ID  CKD +   AL +F E
Sbjct: 228 GPVLNRLCKSGNSA---LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 287

Query: 340 MQSQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKL 399
           M+ +G+K +VVTY+SLI GLCN+GK ++   ++ EM+  N+ P+V+T++ALI+ + K+  
Sbjct: 288 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 347

Query: 400 LEEARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNC 459
           L EA+EL++ +  +G+AP+  T+N+L+DG+CK   + EA  + +LM+ KG  PD+ TY+ 
Sbjct: 348 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 407

Query: 460 LIVGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRG 519
           LI  +C+  ++++   L  E+  +GL  +T+TYN LV  +C+  +   A  L  EM+ RG
Sbjct: 408 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 467

Query: 520 LRPSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDAN 579
           + PS +TY ILL+G C  G L  AL + ++M+K      +  YN++I G C   K++DA 
Sbjct: 468 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 527

Query: 580 RLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 604
            L   + +KG+ P+  TY ++   + +KG L + +
Sbjct: 528 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545

[Close]

BLAST of CmUC02G040580 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-80
Identity = 164/505 (32.48%), Postives = 274/505 (54.26%), Query Frame = 0


Query: 89  LVLRYFNWSQKE--LKVNYNIELFCRLLNLLANAKYYPKIRSFLD--SFVKGETNYSISL 148
           L L++  W  K+  L+ ++ ++L C   ++L  A+ Y   R  L   S + G++++    
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111

Query: 149 IFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSG 208
           +  T  +C+    +N  + D+L+  Y++       LE F+  G YG+  SV +CN +L  
Sbjct: 112 LMTTYRLCN----SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 171

Query: 209 LVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPN 268
           +VK  E   V    KEM++RKI P++ TFNI+IN LC  G   K+  ++  M+  G  P 
Sbjct: 172 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 231

Query: 269 VVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALR 328
           +VTYNT++  YCK GR      A  +L  M +  V  +  T+N+LI   C+   ++    
Sbjct: 232 IVTYNTVLHWYCKKGR---FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 291

Query: 329 VFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYC 388
           + ++M+ + + PN VTYN+LING  NEGK+  A  L++EMLS  L PN +T+NALI+G+ 
Sbjct: 292 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 351

Query: 389 KKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVS 448
            +   +EA ++F  +  +GL P+  ++  LLDG CK  + + A      M   G      
Sbjct: 352 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 411

Query: 449 TYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEM 508
           TY  +I G C+ G ++E   LLNEM + G+  D VTY+ L++ +C+    K A  ++  +
Sbjct: 412 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 471

Query: 509 LDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKL 568
              GL P+ + Y+ L+   C  G L+ A+ + + M  EG   +  T+NVL+   C+ GK+
Sbjct: 472 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 531

Query: 569 EDANRLLNEMLEKGLIPNRTTYEII 590
            +A   +  M   G++PN  +++ +
Sbjct: 532 AEAEEFMRCMTSDGILPNTVSFDCL 549

[Close]

BLAST of CmUC02G040580 vs. ExPASy TrEMBL
Match: A0A5D3BCX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001150 PE=4 SV=1)

HSP 1 Score: 1119.4 bits (2894), Expect = 0.0e+00
Identity = 549/607 (90.44%), Postives = 572/607 (94.23%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIRLSSASRIFP KIDR  IFSTT+LPFCTYNST TAPTSNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLPFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSH KF+SPIDFLHQL+ SG VDPLLVLRYFNWS++ELKVNY+IEL CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           KYYPKIRS LDSFVKGETN SISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKT+ GL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLS LVKE+E GDVEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEVGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPN VTYNTLIDGYCKMGR GKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PN VTFN+LIDGFCKDENVS AL+VF+EMQSQGLKP VVTYNSLING+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNV TFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM  RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEK+EPKKAARLIDEMLDRGL+PSHLTYNILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANV TYNVLI GYCRKGKLEDAN LLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLY 608
           DIEGHLY
Sbjct: 601 DIEGHLY 607

[Close]

BLAST of CmUC02G040580 vs. ExPASy TrEMBL
Match: A0A5A7U323 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001350 PE=4 SV=1)

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 549/607 (90.44%), Postives = 572/607 (94.23%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIRLSSASRIFP KIDR  IFSTT+L FCTYNST TAPTSNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSH KF+SPIDFLHQL+ SG VDPLLVLRYFNWS++ELKVNY+IEL CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           KYYPKIRS LDSFVKGETN SISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKT+ GL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLS LVKE+EFGDVEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPN VTYNTLIDGYCKMGR GKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PN VTFN+LIDGFCKDENVS AL+VF+EMQSQGLKP VVTYNSLING+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNV TFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM  RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEK+EPKKAARLIDEMLDRGL+PSHLTYNILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANV TYNVLI GYCRKGKLEDAN LLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLY 608
           DIEGHLY
Sbjct: 601 DIEGHLY 607

[Close]

BLAST of CmUC02G040580 vs. ExPASy TrEMBL
Match: A0A1S3BXE0 (pentatricopeptide repeat-containing protein At1g09820 OS=Cucumis melo OX=3656 GN=LOC103494244 PE=4 SV=1)

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 549/607 (90.44%), Postives = 572/607 (94.23%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MNVIIRLSSASRIFP KIDR  IFSTT+L FCTYNST TAPTSNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           S LKSH KF+SPIDFLHQL+ SG VDPLLVLRYFNWS++ELKVNY+IEL CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           KYYPKIRS LDSFVKGETN SISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKT+ GL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLS LVKE+EFGDVEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPN VTYNTLIDGYCKMGR GKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PN VTFN+LIDGFCKDENVS AL+VF+EMQSQGLKP VVTYNSLING+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNV TFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM  RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEK+EPKKAARLIDEMLDRGL+PSHLTYNILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANV TYNVLI GYCRKGKLEDAN LLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLY 608
           DIEGHLY
Sbjct: 601 DIEGHLY 607

[Close]

BLAST of CmUC02G040580 vs. ExPASy TrEMBL
Match: A0A6J1DRY0 (pentatricopeptide repeat-containing protein At1g09820 OS=Momordica charantia OX=3673 GN=LOC111023289 PE=4 SV=1)

HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 542/608 (89.14%), Postives = 570/608 (93.75%), Query Frame = 0


Query: 1   MNVIIRLSSASRIFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQW 60
           MN + RL    RIFP KIDRK IFSTT+ P CTYNST TA +SNDFDP IIS+LISRQQW
Sbjct: 1   MNAVNRL--PWRIFPAKIDRKYIFSTTHPPLCTYNSTSTASSSNDFDPQIISELISRQQW 60

Query: 61  SNLKSHFKFESPIDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANA 120
           SNLKSHFKF+SPIDFLH LLGSG VDPLLVLRYFNWSQKELKVNY+IELFCRLLNLLANA
Sbjct: 61  SNLKSHFKFKSPIDFLHLLLGSGAVDPLLVLRYFNWSQKELKVNYSIELFCRLLNLLANA 120

Query: 121 KYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGL 180
           K YPKIRSFLDSFVKGETN +ISLIF+TLSVC DQFCANSIIADMLVLAYVKNSKT  GL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCTISLIFYTLSVCGDQFCANSIIADMLVLAYVKNSKTSLGL 180

Query: 181 EAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKR+GDYGYKLSVLSCNPLLS LVKE+EFGDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRSGDYGYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWG WPNVVTYNTLIDGYCKMGR GKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300

Query: 301 PNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVL 360
           PNDVTFNILIDGFCKDEN+SAAL+VF+EM+ QGLKP+VVTYNSLINGLCNEGKLNEA  L
Sbjct: 301 PNDVTFNILIDGFCKDENISAALKVFEEMRIQGLKPSVVTYNSLINGLCNEGKLNEANTL 360

Query: 361 VDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCK 420
           +DEM +SNLKPNV+TYNALINGYCKKKLLEEARELFDNIGKQGLAPNV TFNTLLDGYCK
Sbjct: 361 LDEMSNSNLKPNVVTYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 420

Query: 421 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVT 480
           CGKM+EAFLL++LMLEKG  PDVSTYNCLIVGFC+EGKMEEV+NLLNEM  RGLKAD VT
Sbjct: 421 CGKMDEAFLLRSLMLEKGLPPDVSTYNCLIVGFCKEGKMEEVENLLNEMEERGLKADLVT 480

Query: 481 YNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQME 540
           YNIL+SAWCEKREPKKAA LIDEM  RGLRPSHLTYNILLNGYC+EGNLRAALNVRKQME
Sbjct: 481 YNILISAWCEKREPKKAAGLIDEMFHRGLRPSHLTYNILLNGYCIEGNLRAALNVRKQME 540

Query: 541 KEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           K+GRWANV TYNVLIQGYCRKGKLEDAN LLNEMLEKGLIPNRTTYEII+EEMMEKGFLP
Sbjct: 541 KDGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIREEMMEKGFLP 600

Query: 601 DIEGHLYQ 609
           DIEGHLYQ
Sbjct: 601 DIEGHLYQ 606

[Close]

BLAST of CmUC02G040580 vs. ExPASy TrEMBL
Match: A0A6J1FI86 (pentatricopeptide repeat-containing protein At1g09820 OS=Cucurbita moschata OX=3662 GN=LOC111444357 PE=4 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 521/596 (87.42%), Postives = 557/596 (93.46%), Query Frame = 0


Query: 13  IFPGKIDRKPIFSTTYLPFCTYNSTYTAPTSNDFDPLIISDLISRQQWSNLKSHFKFESP 72
           IF  K  R+  FSTT+LPFCTYNSTYTAPTSNDFDP IISDLISRQQWSNLKSHFKF++P
Sbjct: 11  IFTAKFGRRYKFSTTHLPFCTYNSTYTAPTSNDFDPQIISDLISRQQWSNLKSHFKFKTP 70

Query: 73  IDFLHQLLGSGVVDPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANAKYYPKIRSFLDS 132
           IDFLH+LLGSG VDPLLVLRYF WSQKELKVNYNIELFCRLLNLLANAKYYPK+RSFLDS
Sbjct: 71  IDFLHELLGSGAVDPLLVLRYFKWSQKELKVNYNIELFCRLLNLLANAKYYPKMRSFLDS 130

Query: 133 FVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYK 192
           FVK ETN +ISLIFHTLSVC DQFCANSIIADMLVLAYVKNSKT  GLEAFKRAGDYGYK
Sbjct: 131 FVKRETNCTISLIFHTLSVCGDQFCANSIIADMLVLAYVKNSKTALGLEAFKRAGDYGYK 190

Query: 193 LSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDV 252
           LSVLSCNPLL+ LVKENEFGDVEFVYKEMIRRK SPNL TFNIVI+GLCK+G+LNKAGDV
Sbjct: 191 LSVLSCNPLLNALVKENEFGDVEFVYKEMIRRKFSPNLFTFNIVIHGLCKIGRLNKAGDV 250

Query: 253 IDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDG 312
           +DDMK+WG  PNVVTYNTLIDGYCK+GR GKM+KADAILKEMVAN VSPNDVTFNILIDG
Sbjct: 251 LDDMKIWGFLPNVVTYNTLIDGYCKVGRVGKMFKADAILKEMVANNVSPNDVTFNILIDG 310

Query: 313 FCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPN 372
           FCKDEN SAA++VF EMQSQG+KP VVTYNSLINGLCNEGKLNEA+VL+DEM S NLKPN
Sbjct: 311 FCKDENASAAMKVFDEMQSQGVKPTVVTYNSLINGLCNEGKLNEARVLLDEMSSLNLKPN 370

Query: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQN 432
           V+TYNALINGYCKKKLLEEAR+LFD+IGKQGL PNV TFNTL+DGYCKCGKM EAFL+++
Sbjct: 371 VVTYNALINGYCKKKLLEEARDLFDDIGKQGLDPNVITFNTLVDGYCKCGKMNEAFLVRS 430

Query: 433 LMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKR 492
           LM EKGFLP+VSTYNCLI GFCREGKMEE KNLLNEM  RGLKADT+TYNIL+SAWCEK 
Sbjct: 431 LMFEKGFLPNVSTYNCLITGFCREGKMEEAKNLLNEMEGRGLKADTITYNILISAWCEKG 490

Query: 493 EPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRWANVATYN 552
           E KKAARLIDEMLDRGL+PSHLT+NILLNGYC EGNLRAALNVRKQMEKEGRWANV TYN
Sbjct: 491 ESKKAARLIDEMLDRGLQPSHLTFNILLNGYCTEGNLRAALNVRKQMEKEGRWANVVTYN 550

Query: 553 VLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYQ 609
           VLI+GYCRKGK+EDAN LLNEMLEKGLIPNRTTYEI++EEMMEKGFLPDIEGHLYQ
Sbjct: 551 VLIRGYCRKGKMEDANGLLNEMLEKGLIPNRTTYEIVREEMMEKGFLPDIEGHLYQ 606

[Close]

BLAST of CmUC02G040580 vs. TAIR 10
Match: AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 690.6 bits (1781), Expect = 1.2e-198
Identity = 335/578 (57.96%), Postives = 434/578 (75.09%), Query Frame = 0


Query: 32  CTYNSTYT-APTSNDFDPLIISDLISRQQWSNLKSHFKFESPIDFLHQLLGSGVVDPLLV 91
           C+ +ST T +P    +D  +I+DLI +Q WS L  H    +P +   QL+ S  +DP L 
Sbjct: 26  CSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLI-SSELDPDLC 85

Query: 92  LRYFNWSQKELKVNYNIELFCRLLNLLANAKYYPKIRSFLDSFVKGETNYSISLIFHTLS 151
           LRY++W  K   ++ ++EL  +LL+ LANAK Y KIRSFLD FV+  +++ +  IFH +S
Sbjct: 86  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 145

Query: 152 VCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKENE 211
           +C D  C NSIIADMLVLAY  NS+   G EAFKR+G YGYKLS LSC PL+  L+KEN 
Sbjct: 146 MC-DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 205

Query: 212 FGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTYNT 271
             DVE+VYKEMIRRKI PN+ TFN+VIN LCK GK+NKA DV++DMKV+G  PNVV+YNT
Sbjct: 206 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 265

Query: 272 LIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQ 331
           LIDGYCK+G  GKMYKADA+LKEMV N VSPN  TFNILIDGF KD+N+  +++VFKEM 
Sbjct: 266 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 325

Query: 332 SQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLE 391
            Q +KPNV++YNSLINGLCN GK++EA  + D+M+S+ ++PN+ITYNALING+CK  +L+
Sbjct: 326 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 385

Query: 392 EARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLI 451
           EA ++F ++  QG  P  + +N L+D YCK GK+++ F L+  M  +G +PDV TYNCLI
Sbjct: 386 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 445

Query: 452 VGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLR 511
            G CR G +E  K L +++  +GL  D VT++IL+  +C K E +KAA L+ EM   GL+
Sbjct: 446 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 505

Query: 512 PSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRW-ANVATYNVLIQGYCRKGKLEDANR 571
           P HLTYNI++ GYC EGNL+AA N+R QMEKE R   NVA+YNVL+QGY +KGKLEDAN 
Sbjct: 506 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 565

Query: 572 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 608
           LLNEMLEKGL+PNR TYEI+KEEM+++GF+PDIEGHL+
Sbjct: 566 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600

[Close]

BLAST of CmUC02G040580 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.6e-91
Identity = 187/541 (34.57%), Postives = 288/541 (53.23%), Query Frame = 0


Query: 86  DPLLVLRYFNWSQKELKVNYNIELFCRLLNLLANAKYYPKIRSFLDSFVKGET--NYSIS 145
           D  L+L++ NW+       + +   C  L++L   K Y K    L   V  +T  +   S
Sbjct: 61  DQALILKFLNWANPH--QFFTLRCKCITLHILTKFKLY-KTAQILAEDVAAKTLDDEYAS 120

Query: 146 LIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLS 205
           L+F +L    D   + S + D++V +Y + S     L     A  +G+   VLS N +L 
Sbjct: 121 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 180

Query: 206 GLVK-ENEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLW 265
             ++ +      E V+KEM+  ++SPN+ T+NI+I G C  G ++ A  + D M+  G  
Sbjct: 181 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 240

Query: 266 PNVVTYNTLIDGYCKMG--------------------------------RAGKMYKADAI 325
           PNVVTYNTLIDGYCK+                                 R G+M +   +
Sbjct: 241 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 300

Query: 326 LKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLCN 385
           L EM     S ++VT+N LI G+CK+ N   AL +  EM   GL P+V+TY SLI+ +C 
Sbjct: 301 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 360

Query: 386 EGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVKT 445
            G +N A   +D+M    L PN  TY  L++G+ +K  + EA  +   +   G +P+V T
Sbjct: 361 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 420

Query: 446 FNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMG 505
           +N L++G+C  GKME+A  +   M EKG  PDV +Y+ ++ GFCR   ++E   +  EM 
Sbjct: 421 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 480

Query: 506 RRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNLR 565
            +G+K DT+TY+ L+  +CE+R  K+A  L +EML  GL P   TY  L+N YCMEG+L 
Sbjct: 481 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 540

Query: 566 AALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEIIK 592
            AL +  +M ++G   +V TY+VLI G  ++ +  +A RLL ++  +  +P+  TY  + 
Sbjct: 541 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 598

[Close]

BLAST of CmUC02G040580 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 306.2 bits (783), Expect = 6.2e-83
Identity = 166/515 (32.23%), Postives = 283/515 (54.95%), Query Frame = 0


Query: 110 FCRLLNLLANAKYYPKIRSFLDSFVKGETNYSISLIFHTLSVCSDQFCANSIIADMLVLA 169
           F +LL+ +A    +  + S  +       N  IS   +T S+  + FC            
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQM----QNLGISHNLYTYSILINCFC------------ 143

Query: 170 YVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKENEFGDVEFVYKEMIRRKISPN 229
             + S+    L    +    GY+  +++ N LL+G    N   D   +  +M+     P+
Sbjct: 144 --RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 203

Query: 230 LITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTYNTLIDGYCKMGRAGKMYKADA 289
             TFN +I+GL +  + ++A  ++D M V G  P++VTY  +++G CK    G +  A +
Sbjct: 204 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK---RGDIDLALS 263

Query: 290 ILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKEMQSQGLKPNVVTYNSLINGLC 349
           +LK+M   K+ P  V +N +ID  C  +NV+ AL +F EM ++G++PNVVTYNSLI  LC
Sbjct: 264 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 323

Query: 350 NEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVK 409
           N G+ ++A  L+ +M+   + PNV+T++ALI+ + K+  L EA +L+D + K+ + P++ 
Sbjct: 324 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 383

Query: 410 TFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM 469
           T+++L++G+C   +++EA  +  LM+ K   P+V TYN LI GFC+  +++E   L  EM
Sbjct: 384 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 443

Query: 470 GRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRGLRPSHLTYNILLNGYCMEGNL 529
            +RGL  +TVTY  L+  + + RE   A  +  +M+  G+ P  +TY+ILL+G C  G +
Sbjct: 444 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 503

Query: 530 RAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDANRLLNEMLEKGLIPNRTTYEII 589
             AL V + +++     ++ TYN++I+G C+ GK+ED   L   +  KG+ PN  TY  +
Sbjct: 504 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 563

Query: 590 KEEMMEKGFLPDIEG---HLYQEGEQPPSLAFESL 622
                 KG   + +     + +EG  P S  + +L
Sbjct: 564 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577

[Close]

BLAST of CmUC02G040580 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 303.9 bits (777), Expect = 3.1e-82
Identity = 164/515 (31.84%), Postives = 285/515 (55.34%), Query Frame = 0


Query: 100 ELKVNYNIELFCRLL-----------NLLANAKYYPKIRSFLDSFVKGETNYSISLIFHT 159
           ++KVN  I+LF  ++           N L +A    K    +  F KG     I    +T
Sbjct: 48  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107

Query: 160 LSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSGLVKE 219
           +++              ++  Y +  K +F      RA   GY+   ++ + L++G   E
Sbjct: 108 MTI--------------MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 167

Query: 220 NEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPNVVTY 279
               +   +   M+  K  P+L+T + +INGLC  G++++A  +ID M  +G  P+ VTY
Sbjct: 168 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 227

Query: 280 NTLIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALRVFKE 339
             +++  CK G +     A  + ++M    +  + V ++I+ID  CKD +   AL +F E
Sbjct: 228 GPVLNRLCKSGNSA---LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 287

Query: 340 MQSQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYCKKKL 399
           M+ +G+K +VVTY+SLI GLCN+GK ++   ++ EM+  N+ P+V+T++ALI+ + K+  
Sbjct: 288 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 347

Query: 400 LEEARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNC 459
           L EA+EL++ +  +G+AP+  T+N+L+DG+CK   + EA  + +LM+ KG  PD+ TY+ 
Sbjct: 348 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 407

Query: 460 LIVGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEMLDRG 519
           LI  +C+  ++++   L  E+  +GL  +T+TYN LV  +C+  +   A  L  EM+ RG
Sbjct: 408 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 467

Query: 520 LRPSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKLEDAN 579
           + PS +TY ILL+G C  G L  AL + ++M+K      +  YN++I G C   K++DA 
Sbjct: 468 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 527

Query: 580 RLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 604
            L   + +KG+ P+  TY ++   + +KG L + +
Sbjct: 528 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545

[Close]

BLAST of CmUC02G040580 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-81
Identity = 164/505 (32.48%), Postives = 274/505 (54.26%), Query Frame = 0


Query: 89  LVLRYFNWSQKE--LKVNYNIELFCRLLNLLANAKYYPKIRSFLD--SFVKGETNYSISL 148
           L L++  W  K+  L+ ++ ++L C   ++L  A+ Y   R  L   S + G++++    
Sbjct: 92  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 151

Query: 149 IFHTLSVCSDQFCANSIIADMLVLAYVKNSKTIFGLEAFKRAGDYGYKLSVLSCNPLLSG 208
           +  T  +C+    +N  + D+L+  Y++       LE F+  G YG+  SV +CN +L  
Sbjct: 152 LMTTYRLCN----SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 211

Query: 209 LVKENEFGDVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGLWPN 268
           +VK  E   V    KEM++RKI P++ TFNI+IN LC  G   K+  ++  M+  G  P 
Sbjct: 212 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 271

Query: 269 VVTYNTLIDGYCKMGRAGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALR 328
           +VTYNT++  YCK GR      A  +L  M +  V  +  T+N+LI   C+   ++    
Sbjct: 272 IVTYNTVLHWYCKKGR---FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 331

Query: 329 VFKEMQSQGLKPNVVTYNSLINGLCNEGKLNEAKVLVDEMLSSNLKPNVITYNALINGYC 388
           + ++M+ + + PN VTYN+LING  NEGK+  A  L++EMLS  L PN +T+NALI+G+ 
Sbjct: 332 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 391

Query: 389 KKKLLEEARELFDNIGKQGLAPNVKTFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVS 448
            +   +EA ++F  +  +GL P+  ++  LLDG CK  + + A      M   G      
Sbjct: 392 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 451

Query: 449 TYNCLIVGFCREGKMEEVKNLLNEMGRRGLKADTVTYNILVSAWCEKREPKKAARLIDEM 508
           TY  +I G C+ G ++E   LLNEM + G+  D VTY+ L++ +C+    K A  ++  +
Sbjct: 452 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 511

Query: 509 LDRGLRPSHLTYNILLNGYCMEGNLRAALNVRKQMEKEGRWANVATYNVLIQGYCRKGKL 568
              GL P+ + Y+ L+   C  G L+ A+ + + M  EG   +  T+NVL+   C+ GK+
Sbjct: 512 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 571

Query: 569 EDANRLLNEMLEKGLIPNRTTYEII 590
            +A   +  M   G++PN  +++ +
Sbjct: 572 AEAEEFMRCMTSDGILPNTVSFDCL 589

The following BLAST results are available for this feature:

BLAST of CmUC02G040580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891207.1	0.0e+00	92.27	pentatricopeptide repeat-containing protein At1g09820 [Benincasa hispida]	[more]
XP_004144813.1	0.0e+00	89.53	pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >XP_0317...	[more]
TYJ96471.1	0.0e+00	90.44	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008453581.1	0.0e+00	90.44	PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Cucumis melo] ...	[more]
XP_022156382.1	0.0e+00	89.14	pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia] >XP_...	[more]

BLAST of CmUC02G040580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04504	1.7e-197	57.96	Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	2.3e-90	34.57	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9CAN0	8.8e-82	32.23	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]
Q6NQ83	4.4e-81	31.84	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9LVQ5	1.7e-80	32.48	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmUC02G040580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCX2	0.0e+00	90.44	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7U323	0.0e+00	90.44	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BXE0	0.0e+00	90.44	pentatricopeptide repeat-containing protein At1g09820 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DRY0	0.0e+00	89.14	pentatricopeptide repeat-containing protein At1g09820 OS=Momordica charantia OX=...	[more]
A0A6J1FI86	0.0e+00	87.42	pentatricopeptide repeat-containing protein At1g09820 OS=Cucurbita moschata OX=3...	[more]

BLAST of CmUC02G040580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09820.1	1.2e-198	57.96	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	1.6e-91	34.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63130.1	6.2e-83	32.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22470.1	3.1e-82	31.84	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G55840.1	1.2e-81	32.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 197..226 e-value: 0.082 score: 13.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 304..338 e-value: 2.2E-11 score: 41.2 coord: 339..373 e-value: 3.7E-10 score: 37.3 coord: 197..229 e-value: 1.4E-6 score: 26.1 coord: 374..408 e-value: 5.6E-9 score: 33.6 coord: 550..582 e-value: 2.4E-10 score: 37.9 coord: 515..543 e-value: 1.1E-6 score: 26.5 coord: 410..443 e-value: 8.1E-10 score: 36.3 coord: 231..261 e-value: 8.7E-7 score: 26.7 coord: 479..512 e-value: 1.4E-7 score: 29.2 coord: 445..477 e-value: 2.3E-8 score: 31.7 coord: 266..302 e-value: 1.4E-6 score: 26.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 441..489 e-value: 5.2E-16 score: 58.6 coord: 371..420 e-value: 8.4E-19 score: 67.5 coord: 229..277 e-value: 5.5E-17 score: 61.7 coord: 304..350 e-value: 1.2E-19 score: 70.2 coord: 547..589 e-value: 9.7E-15 score: 54.5
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 507..540 e-value: 5.6E-9 score: 35.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 13.241308
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 512..546 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 194..228 score: 9.722731
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 442..476 score: 12.934392
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 372..406 score: 13.526301
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 264..301 score: 11.476539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 302..336 score: 13.383805
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 13.635915
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 547..581 score: 14.808774
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 477..511 score: 13.054966
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 229..263 score: 11.476539
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 86..284 e-value: 1.7E-30 score: 108.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 285..399 e-value: 9.7E-43 score: 148.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 472..540 e-value: 1.4E-19 score: 72.3 coord: 400..471 e-value: 2.7E-23 score: 84.5 coord: 541..603 e-value: 5.5E-13 score: 50.8
None	No IPR available	PANTHER	PTHR47932:SF2	OS10G0484300 PROTEIN	coord: 40..606
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 40..606

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G040580.1	CmUC02G040580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding