CmUC02G038920 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G038920
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr02: 26498752 .. 26500817 (+)
RNA-Seq Expression	CmUC02G038920
Synteny	CmUC02G038920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAATTTTGAAGATGAGCTCATAATCGAACCAGGATATTCATGCTTAATCTGGGTTCAGCTTCTTGTTATTCTCCTCATCTTCGTCCTTTGTTCTCTTACCATCTTCGCTATTGATTTCTCCAAAACCAATACTACTGATATCAACTCCACTACCGCCATTGCCTCCTCTTCCACTACTCGCTTCCTTTCTCATACTTCTCACAACGGGAAGATCAGAATTGACCCTAATCCACCGCGAAATGCGCAGGTATGCCGTATCTCGGCTTGTCTTTTTAACGACCAGTGTAAGAATTTTTTTATATGTGTAGCTGGTGTAAGAAAATTTTTTTCACGACTTGAAGGGGAATTTTTCGATTATGTCGAGAATTAGATTCGAGTAGTTTTCTGATACAGAATTCGGTCGAATTCGTTGGTGCTGTTTCACTCTATTTTCCAATTTTGGATTTCTAGATTCCGCCATAGCTACGGAATCAATTGCGTGGTTGTTTCCACCTAGATTGATCAGTTTTTTGCTGGCTAATGGGCGAGAATATTGGGAGACAGAACTCTTTAGGTCTATTCACGAATTGAGTATTTCGTTTACACTACATAGGAAAATTGGTGTTGATAGTGTCAAGAGGTTCCCTGTGATGGTTGAAAATCAGGGAGGTTTTTCAATTTTATAAAGAGTTGGTTACCCGTGCGAGCTTTGCCCTCTGTCTAGTGCCCAAAATTTTCTTTGATTCAACTCAAAATTCATGGGTAGCAGGACAAGGAACGAACGATCTTCCCTAAGGCCTTGTGAAACTGTAATATTTGCACAATTGGGTGGATGGAGATTTCTGCTGGAAGCTCTTGCTTGTACCTGTCCAGAACGATTCAAAATGAAAAATTAGGTCAGGAATTGTGTCAGGTGAGTTTCTCATCGAGGTGCGCTGCAATTGAACACTAGACATGGAGTTTGAGATATAGACCATTTTGCCATTGCCCACAGCCAGCTAAAAATTTTGGAACTGAATGTCTTTATTAACTTTGATCTTGCTCTGTGCTTGAGCTGAATGTTGCTGGAGCTCAGCCAAAATTGCATTGCGTCACAACCTTGCAGCTATTGGTCAATAGCAAAATTTACAATTGGAATTTGTCCATAACATAGTATAGGAGGGGGTGTCTTCCATAGACAATGAAGAAAGGGGTTGTTGGTGAAATTATGGAAACTGGCATTGCACCAACATTCTACTTGAGGAATATCCAGAAATGGCTCAGAAAAATTGTATCTGAGATGGAGAAGGAAAACCCATGTAAGTAGCCTTGCGATTTTACTGAATGAAGATGCCAGCCATAGAGTGAGAATAGAAGGCAAAAATGACAAAATTGACATCAGCAATCTGCCACAGCTTCCTTCAAGGAGCTTGGAATCCATTCAGAGCACTTTCGCTGGGTCTTATCCAAGGACATTTGTTAACTTCACTTCATTCTGAACCGAAGGTTTTATGGATCTCTCCAACCAAGTAGACACTCTCACTCATTCACCTCACCAATTCCTTTCTCAAGAGACTCAACTTTTTACTCCATCTCCTTCTATGCAATGGTAATGGATTGAACAGCTTCTATATCATAGATGCAATCCTGATGTCAACGAAGAAAATAACGACAATGGTGTTAGCTTCTATGAATAGGGTCTTTTATTAATGCTTGAAAGCTATAATTCAGAGCAATGGTGTTAGCTTTTGGTGAGTATTAACTCTCTCTTGAATAGATTCTTCCTGCCCCCCAATAGATCACCCCCTCGTGTATTCCTATCCCTTGCAACTAACTAGCAGCCCCGCAAAAGATGGTAACGGATAGCTTCAGTGCCATGGATAGGATTCTTATCTCAATGAAGATCACGAATACAAATAGAGGGTTTTTATAAATGCTTTCCGAGGAATGGTGTTAGCATTTTGTGAGGATTGAATCTCTCTCTGCTAGATTCTTCCTGCCCCCCTTAGATCACCCCCTCGTAAGCCAACATTCTTGTAACTAGAGTTTGTTTTATTATTTACAGATGGAGTATTTTTTATCCAGGAAAGTATTGATGCCTAA

mRNA sequence

ATGTTCAATTTTGAAGATGAGCTCATAATCGAACCAGGATATTCATGCTTAATCTGGGTTCAGCTTCTTGTTATTCTCCTCATCTTCGTCCTTTGTTCTCTTACCATCTTCGCTATTGATTTCTCCAAAACCAATACTACTGATATCAACTCCACTACCGCCATTGCCTCCTCTTCCACTACTCGCTTCCTTTCTCATACTTCTCACAACGGGAAGATCAGAATTGACCCTAATCCACCGCGAAATGCGCAGGTATGCCGTATCTCGGCTTGTCTTTTTAACGACCAGTATTCCGCCATAGCTACGGAATCAATTGCGTGGTTGTTTCCACCTAGATTGATCAGTTTTTTGCTGGCTAATGGGCGAGAATATTGGGAGACAGAACTCTTTAGGTCTATTCACGAATTGAGTATTTCGTTTACACTACATAGGAAAATTGGTGTTGATAGTGTCAAGAGGTTCCCTGTGATGGTTGAAAATCAGGGAGATTCTTCCTGCCCCCCAATAGATCACCCCCTCGTGTATTCCTATCCCTTGCAACTAACTAGCAGCCCCGCAAAAGATGATGGAGTATTTTTTATCCAGGAAAGTATTGATGCCTAA

Coding sequence (CDS)

ATGTTCAATTTTGAAGATGAGCTCATAATCGAACCAGGATATTCATGCTTAATCTGGGTTCAGCTTCTTGTTATTCTCCTCATCTTCGTCCTTTGTTCTCTTACCATCTTCGCTATTGATTTCTCCAAAACCAATACTACTGATATCAACTCCACTACCGCCATTGCCTCCTCTTCCACTACTCGCTTCCTTTCTCATACTTCTCACAACGGGAAGATCAGAATTGACCCTAATCCACCGCGAAATGCGCAGGTATGCCGTATCTCGGCTTGTCTTTTTAACGACCAGTATTCCGCCATAGCTACGGAATCAATTGCGTGGTTGTTTCCACCTAGATTGATCAGTTTTTTGCTGGCTAATGGGCGAGAATATTGGGAGACAGAACTCTTTAGGTCTATTCACGAATTGAGTATTTCGTTTACACTACATAGGAAAATTGGTGTTGATAGTGTCAAGAGGTTCCCTGTGATGGTTGAAAATCAGGGAGATTCTTCCTGCCCCCCAATAGATCACCCCCTCGTGTATTCCTATCCCTTGCAACTAACTAGCAGCCCCGCAAAAGATGATGGAGTATTTTTTATCCAGGAAAGTATTGATGCCTAA

Protein sequence

MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSSTTRFLSHTSHNGKIRIDPNPPRNAQVCRISACLFNDQYSAIATESIAWLFPPRLISFLLANGREYWETELFRSIHELSISFTLHRKIGVDSVKRFPVMVENQGDSSCPPIDHPLVYSYPLQLTSSPAKDDGVFFIQESIDA

Homology

[Close]

BLAST of CmUC02G038920 vs. NCBI nr
Match: XP_038900493.1 (uncharacterized protein LOC120087700 [Benincasa hispida] >XP_038900494.1 uncharacterized protein LOC120087700 [Benincasa hispida] >XP_038900495.1 uncharacterized protein LOC120087700 [Benincasa hispida])

HSP 1 Score: 131.7 bits (330), Expect = 6.9e-27
Identity = 73/89 (82.02%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1   MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
           MFNFEDELIIEPG+S LIW+QLLVILLIF+LC LTIFAIDFSKTNTTDINST AIASSST
Sbjct: 68  MFNFEDELIIEPGFSWLIWIQLLVILLIFILCCLTIFAIDFSKTNTTDINSTAAIASSST 127

Query: 61  TRFLSHTSH----NGKIRIDPNPPRNAQV 86
           TRFLSH       N  I IDPNPPRNAQV
Sbjct: 128 TRFLSHNGKNIHPNHNIGIDPNPPRNAQV 156

[Close]

BLAST of CmUC02G038920 vs. NCBI nr
Match: XP_008457891.2 (PREDICTED: uncharacterized protein LOC103497467 [Cucumis melo] >KAA0045887.1 uncharacterized protein E6C27_scaffold243G004230 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-24
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIA-SSS 60
          MFNFEDELII+PG S LIW+QLLVILL+F LC LTIFAIDFSK++T D NST AIA SSS
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61 TTRFLSHTSHNGK-------IRIDPNPPRNAQV 86
          TTRFLSH++HNGK       IRI PNPPRNAQV
Sbjct: 61 TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQV 93

[Close]

BLAST of CmUC02G038920 vs. NCBI nr
Match: TYK13700.1 (uncharacterized protein E5676_scaffold299G002240 [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-24
Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIA-SSS 60
          MFNFEDELII+PG S LIW+QLLVILL+F LC LTIFAIDFSK++T D NST AIA SSS
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61 TTRFLSHTSHNGK-------IRIDPNPPRNAQV 86
          TTRFLSH++HNGK       IRI PNPPRNAQ+
Sbjct: 61 TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQI 93

[Close]

BLAST of CmUC02G038920 vs. NCBI nr
Match: XP_004148441.1 (uncharacterized protein LOC101209555 [Cucumis sativus] >KGN62079.1 hypothetical protein Csa_006351 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-24
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
          MFNFEDELII+PG S LIW+QLLVILLIF LC LTIFA DFSK+NTTD NST AIASSS+
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLIFFLCCLTIFAFDFSKSNTTDFNSTAAIASSSS 60

Query: 61 -TRFLSHTSHNGK-------IRIDPNPPRNAQV 86
           TRFLSH++H+GK       IRI PNPPRNAQV
Sbjct: 61 PTRFLSHSTHSGKNILPNPNIRIGPNPPRNAQV 93

[Close]

BLAST of CmUC02G038920 vs. NCBI nr
Match: XP_022971697.1 (uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971698.1 uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971699.1 uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971700.1 uncharacterized protein LOC111470367 [Cucurbita maxima])

HSP 1 Score: 96.3 bits (238), Expect = 3.2e-16
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
          MFNFEDELI+EPG S LIW+QLLVI+LIF L  LT+FA+DFSK ++T+ NS+ AIASSST
Sbjct: 1  MFNFEDELILEPGVSWLIWIQLLVIILIFALYCLTVFAVDFSK-SSTESNSSAAIASSST 60

Query: 61 TRFLSHTSHNGK------IRIDPNPPRNAQVCR 88
          TRF+   +  GK       RID N PR AQV +
Sbjct: 61 TRFVCDAARKGKNLPNQNFRIDSNRPRKAQVSK 92

[Close]

BLAST of CmUC02G038920 vs. ExPASy TrEMBL
Match: A0A5A7TVH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004230 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIA-SSS 60
          MFNFEDELII+PG S LIW+QLLVILL+F LC LTIFAIDFSK++T D NST AIA SSS
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61 TTRFLSHTSHNGK-------IRIDPNPPRNAQV 86
          TTRFLSH++HNGK       IRI PNPPRNAQV
Sbjct: 61 TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQV 93

[Close]

BLAST of CmUC02G038920 vs. ExPASy TrEMBL
Match: A0A1S3C6P8 (uncharacterized protein LOC103497467 OS=Cucumis melo OX=3656 GN=LOC103497467 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIA-SSS 60
          MFNFEDELII+PG S LIW+QLLVILL+F LC LTIFAIDFSK++T D NST AIA SSS
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61 TTRFLSHTSHNGK-------IRIDPNPPRNAQV 86
          TTRFLSH++HNGK       IRI PNPPRNAQV
Sbjct: 61 TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQV 93

[Close]

BLAST of CmUC02G038920 vs. ExPASy TrEMBL
Match: A0A5D3CQL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002240 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24
Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIA-SSS 60
          MFNFEDELII+PG S LIW+QLLVILL+F LC LTIFAIDFSK++T D NST AIA SSS
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61 TTRFLSHTSHNGK-------IRIDPNPPRNAQV 86
          TTRFLSH++HNGK       IRI PNPPRNAQ+
Sbjct: 61 TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQI 93

[Close]

BLAST of CmUC02G038920 vs. ExPASy TrEMBL
Match: A0A0A0LM30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296040 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
          MFNFEDELII+PG S LIW+QLLVILLIF LC LTIFA DFSK+NTTD NST AIASSS+
Sbjct: 1  MFNFEDELIIQPGISWLIWIQLLVILLIFFLCCLTIFAFDFSKSNTTDFNSTAAIASSSS 60

Query: 61 -TRFLSHTSHNGK-------IRIDPNPPRNAQV 86
           TRFLSH++H+GK       IRI PNPPRNAQV
Sbjct: 61 PTRFLSHSTHSGKNILPNPNIRIGPNPPRNAQV 93

[Close]

BLAST of CmUC02G038920 vs. ExPASy TrEMBL
Match: A0A6J1I2P0 (uncharacterized protein LOC111470367 OS=Cucurbita maxima OX=3661 GN=LOC111470367 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 1  MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
          MFNFEDELI+EPG S LIW+QLLVI+LIF L  LT+FA+DFSK ++T+ NS+ AIASSST
Sbjct: 1  MFNFEDELILEPGVSWLIWIQLLVIILIFALYCLTVFAVDFSK-SSTESNSSAAIASSST 60

Query: 61 TRFLSHTSHNGK------IRIDPNPPRNAQVCR 88
          TRF+   +  GK       RID N PR AQV +
Sbjct: 61 TRFVCDAARKGKNLPNQNFRIDSNRPRKAQVSK 92

The following BLAST results are available for this feature:

BLAST of CmUC02G038920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900493.1	6.9e-27	82.02	uncharacterized protein LOC120087700 [Benincasa hispida] >XP_038900494.1 unchara...	[more]
XP_008457891.2	2.5e-24	75.27	PREDICTED: uncharacterized protein LOC103497467 [Cucumis melo] >KAA0045887.1 unc...	[more]
TYK13700.1	3.2e-24	74.19	uncharacterized protein E5676_scaffold299G002240 [Cucumis melo var. makuwa]	[more]
XP_004148441.1	3.2e-24	75.27	uncharacterized protein LOC101209555 [Cucumis sativus] >KGN62079.1 hypothetical ...	[more]
XP_022971697.1	3.2e-16	61.29	uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971698.1 uncharac...	[more]

BLAST of CmUC02G038920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G038920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVH8	1.2e-24	75.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C6P8	1.2e-24	75.27	uncharacterized protein LOC103497467 OS=Cucumis melo OX=3656 GN=LOC103497467 PE=...	[more]
A0A5D3CQL3	1.6e-24	74.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LM30	1.6e-24	75.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296040 PE=4 SV=1	[more]
A0A6J1I2P0	1.6e-16	61.29	uncharacterized protein LOC111470367 OS=Cucurbita maxima OX=3661 GN=LOC111470367...	[more]

BLAST of CmUC02G038920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G038920.1	CmUC02G038920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane