CmUC02G038280 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTGATATACTTTTATACTATATATTTTTGTTCCTTCCTTCCCCCATGTTGATTTGAAGTCTCTGATGGCATGCTTAGACATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCAGCAGCCCTCGAATCTCCTTCTCGAGTGACTTCATCGACATCCAACAATCTCTCAAACACCAAGAGCAGCGCTCCGCAGCTGCCCCTCCCCCCGTCTCTTCCTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTACAAGGACTCCAACCGGGCGGCTACTACTCTTAGAGACGAGCTTCTGGTGGAGGAAGGGGAGGAAGACGACGAGGAGAATGAGAATGACAACGACGACGCTTCGCAGAGGCCTTCGTCTAGGGGCCGGTGGAAGGGCTTTCTTGGGTTGAAAAAGTCTCACAATAATGGTTCAAAGAAAGGGTGTAGAAACGACGGCTCCAGCGGCAGCCGTGAGGTGGGCAGTGGCAAAAGGCCATTCGGTTGGTCGTCTTCTTCACCTAGTACGAGGGCAAACTCATCCCACCAGGTAAACCAATAATTATTCAGTCTCACTCTCTCCCTCTTTTTTAACTCCTGTTTTTCCTAAATTATTGGAGGGGTAATTCGGGAATTCGTATTTTTCAGGTACAAAATGAAGGAGGATCAAGTTGCAAAGACCTGGAGATTGATTTCTAGAGAGAGGGGGAGAAGTTTAGTTAAAGTTGAAAACGGAATGTAGAGCTTCTTCTTCAATCGTTTTTTTTCTTTTAATTTTTTTCTTAAATTTTTAAATTAACCATTTCTAGATTTTTGTGTTGTATGATCGATCAATGCTAATGTTTTTTAGATTTGTAGCTAACTCTTAAGTTGTCGAGTTCATTAATGTTGTTGTCTTAAAAAATTTAGTGTCTTTTTAGAGATTCAAACCATAGACTTTTTAGTCGGTAACATACATTGAAGGTTAGTTGAGTTATACTTGCTCGGCGAATTTCAGTGTTCTCACTATATATATATTTTAAATCTCTCTCTTTGTTTTTGTTCTACTTAGGTTTCTAAAAACTGGAGATCCATGAGAAATTTTTGTAAGGTTTCTGTTGGACCAACCAGAAATGAAGTTGAGTTCCTTTCCAATTCCACCATTCAATTTTCTCTCCCTCTGTTTATCTTTAAATTGTATTTAAGAGACGATCTTAGTAAGC TATTGATATACTTTTATACTATATATTTTTGTTCCTTCCTTCCCCCATGTTGATTTGAAGTCTCTGATGGCATGCTTAGACATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCAGCAGCCCTCGAATCTCCTTCTCGAGTGACTTCATCGACATCCAACAATCTCTCAAACACCAAGAGCAGCGCTCCGCAGCTGCCCCTCCCCCCGTCTCTTCCTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTACAAGGACTCCAACCGGGCGGCTACTACTCTTAGAGACGAGCTTCTGGTGGAGGAAGGGGAGGAAGACGACGAGGAGAATGAGAATGACAACGACGACGCTTCGCAGAGGCCTTCGTCTAGGGGCCGGTGGAAGGGCTTTCTTGGGTTGAAAAAGTCTCACAATAATGGTTCAAAGAAAGGGTGTAGAAACGACGGCTCCAGCGGCAGCCGTGAGGTGGGCAGTGGCAAAAGGCCATTCGGTTGGTCGTCTTCTTCACCTAGTACGAGGGCAAACTCATCCCACCAGGTACAAAATGAAGGAGGATCAAGTTGCAAAGACCTGGAGATTGATTTCTAGAGAGAGGGGGAGAAGTTTAGTTAAAGTTGAAAACGGAATGTAGAGCTTCTTCTTCAATCGTTTTTTTTCTTTTAATTTTTTTCTTAAATTTTTAAATTAACCATTTCTAGATTTTTGTGTTGTATGATCGATCAATGCTAATGTTTTTTAGATTTGTAGCTAACTCTTAAGTTGTCGAGTTCATTAATGTTGTTGTCTTAAAAAATTTAGTGTCTTTTTAGAGATTCAAACCATAGACTTTTTAGTCGGTAACATACATTGAAGGTTAGTTGAGTTATACTTGCTCGGCGAATTTCAGTGTTCTCACTATATATATATTTTAAATCTCTCTCTTTGTTTTTGTTCTACTTAGGTTTCTAAAAACTGGAGATCCATGAGAAATTTTTGTAAGGTTTCTGTTGGACCAACCAGAAATGAAGTTGAGTTCCTTTCCAATTCCACCATTCAATTTTCTCTCCCTCTGTTTATCTTTAAATTGTATTTAAGAGACGATCTTAGTAAGC ATGGCATGCTTAGACATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCAGCAGCCCTCGAATCTCCTTCTCGAGTGACTTCATCGACATCCAACAATCTCTCAAACACCAAGAGCAGCGCTCCGCAGCTGCCCCTCCCCCCGTCTCTTCCTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTACAAGGACTCCAACCGGGCGGCTACTACTCTTAGAGACGAGCTTCTGGTGGAGGAAGGGGAGGAAGACGACGAGGAGAATGAGAATGACAACGACGACGCTTCGCAGAGGCCTTCGTCTAGGGGCCGGTGGAAGGGCTTTCTTGGGTTGAAAAAGTCTCACAATAATGGTTCAAAGAAAGGGTGTAGAAACGACGGCTCCAGCGGCAGCCGTGAGGTGGGCAGTGGCAAAAGGCCATTCGGTTGGTCGTCTTCTTCACCTAGTACGAGGGCAAACTCATCCCACCAGGTACAAAATGAAGGAGGATCAAGTTGCAAAGACCTGGAGATTGATTTCTAG MACLDMYNSDHKSLHRRAPASSPRISFSSDFIDIQQSLKHQEQRSAAAPPPVSSSSDFEFSVSNYSMMPADELFFEGRLLPYKDSNRAATTLRDELLVEEGEEDDEENENDNDDASQRPSSRGRWKGFLGLKKSHNNGSKKGCRNDGSSGSREVGSGKRPFGWSSSSPSTRANSSHQVQNEGGSSCKDLEIDF Homology
BLAST of CmUC02G038280 vs. NCBI nr
Match: XP_038902682.1 (uncharacterized protein LOC120089319 [Benincasa hispida]) HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82 Identity = 168/194 (86.60%), Postives = 178/194 (91.75%), Query Frame = 0
BLAST of CmUC02G038280 vs. NCBI nr
Match: XP_004148034.1 (uncharacterized protein LOC101205218 [Cucumis sativus] >KGN62010.1 hypothetical protein Csa_006289 [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 8.0e-81 Identity = 167/194 (86.08%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CmUC02G038280 vs. NCBI nr
Match: XP_008457833.1 (PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 uncharacterized protein E6C27_scaffold243G003410 [Cucumis melo var. makuwa] >TYJ99465.1 uncharacterized protein E5676_scaffold123G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80 Identity = 169/195 (86.67%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of CmUC02G038280 vs. NCBI nr
Match: XP_023534650.1 (uncharacterized protein LOC111796161 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59 Identity = 148/186 (79.57%), Postives = 157/186 (84.41%), Query Frame = 0
BLAST of CmUC02G038280 vs. NCBI nr
Match: XP_022928078.1 (uncharacterized protein LOC111434969 [Cucurbita moschata] >XP_022954346.1 uncharacterized protein LOC111456619 [Cucurbita moschata] >KAG6571431.1 hypothetical protein SDJN03_30346, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 238.4 bits (607), Expect = 5.1e-59 Identity = 143/192 (74.48%), Postives = 152/192 (79.17%), Query Frame = 0
BLAST of CmUC02G038280 vs. ExPASy TrEMBL
Match: A0A0A0LJI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285940 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.9e-81 Identity = 167/194 (86.08%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CmUC02G038280 vs. ExPASy TrEMBL
Match: A0A5A7TUK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00280 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80 Identity = 169/195 (86.67%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of CmUC02G038280 vs. ExPASy TrEMBL
Match: A0A1S3C600 (uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80 Identity = 169/195 (86.67%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of CmUC02G038280 vs. ExPASy TrEMBL
Match: A0A6J1EMU8 (uncharacterized protein LOC111434969 OS=Cucurbita moschata OX=3662 GN=LOC111434969 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.5e-59 Identity = 143/192 (74.48%), Postives = 152/192 (79.17%), Query Frame = 0
BLAST of CmUC02G038280 vs. ExPASy TrEMBL
Match: A0A6J1KZD6 (uncharacterized protein LOC111499636 OS=Cucurbita maxima OX=3661 GN=LOC111499636 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 9.3e-59 Identity = 147/186 (79.03%), Postives = 155/186 (83.33%), Query Frame = 0
BLAST of CmUC02G038280 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 5.6e-24 Identity = 77/202 (38.12%), Postives = 109/202 (53.96%), Query Frame = 0
BLAST of CmUC02G038280 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14 Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of CmUC02G038280 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). ) HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10 Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CmUC02G038280 vs. TAIR 10
Match: AT3G19200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 6.3e-07 Identity = 51/123 (41.46%), Postives = 61/123 (49.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|