CmUC02G035850 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G035850
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 16167043 .. 16168224 (-)
RNA-Seq ExpressionCmUC02G035850
SyntenyCmUC02G035850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCAAAGCTGCAACCATCCAGTTCAGAAACTTCAAGTATGATCTGAAATCCAAATTGACAATTCTGCCTACAATTGCACCACCGGACAATGGACTTCCTCTTAAGCCTTTAATATACCATTTGGGAAAGTATACCCTGTCGTTCACTGGCTGTATTCTAAGTAAAGCAAATACTAGAAAGAAAGCAAATGCACTAAGAATGTTAATGGCTGCCCCAACTCCTATGTCCGCGATGGATGCCATATATCCTCTTCAAGTAAAAATTAACTGATCTGCACAAAAACATAGGACTCTTCTCAGAATTTTATCATCCCTATCAAGAAGAAAGGGGAAGAGGCAAATAAGTCACCACAGAGCTGATTGTTTTGAAAGTCAATACGATTAAGAAGAATCAAAAGAAAATTACACAAAAAGTTAACAACAACGGTCTGCTCCTCACTAGCAACAAATCCTCAAAAACCCAATTTATAAATCCAGAGAACTAACACTCTGGGCCCTTTTTTTCCATGATTTAAACTCAGAAACTCCCCCAACAGAGCACCGATACTCACAGTTTCAGTCCAGCTGAGCCAACTACTTCTCGAAATGTTGAAGTAAAGACCAAAAGGCAGATTCCAGCCAAGAACTTCAAGATAAAAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAAGGTACCCACTTATGGAAATGAAGTTATGATTCAGAAAAAATGAAAAACACGATGGGAAGAAGGAAAAAGATCGAAGGGGACAAACAGAAGAAGATGAAGAGATCAGCGGACTGTCTTAATCATGTGAGATGTGAATACTTGATAAGCAGCTCACATCAACTGCACGCATCTGTCCTTGACAAAACAATAAACTAAATGAAAAGGCCCAAAGGGTCGGTGATTGATTGGAAAAGGGGGTTCAAAGGATTGAAAATGATGACGGCAAAATGGGAAAACTTAGACCCTTTTGATTTTTTTTTTTTTTTAAAAAAAAATCTTTAATTTCTTCTTCTCTTCTGTGTTTTGAAGGGAAATGGAAACTCTGGAATTTCAAAGAATGATGATGGGGAAACCAAACCTCATAAAACATTGCATTTAATTGAAGCAGAAGGAGACGGTCAGGCCCTCCATGCAGGCACCACTCTGTCTAACGGCTCCTTCTTTGAAATCGACCTCTTTCGGCTACCTCTCTGA

mRNA sequence

CGCAAAGCTGCAACCATCCAGTTCAGAAACTTCAAGTATGATCTGAAATCCAAATTGACAATTCTGCCTACAATTGCACCACCGGACAATGGACTTCCTCTTAAGCCTTTAATATACCATTTGGGAAAGTATACCCTGTCGTTCACTGGCTGTATTCTAAGTAAAGCAAATACTAGAAAGAAAGCAAATGCACTAAGAATGTTAATGGCTGCCCCAACTCCTATGTCCGCGATGGATGCCATATATCCTCTTCAAGGAAATGGAAACTCTGGAATTTCAAAGAATGATGATGGGGAAACCAAACCTCATAAAACATTGCATTTAATTGAAGCAGAAGGAGACGGTCAGGCCCTCCATGCAGGCACCACTCTGTCTAACGGCTCCTTCTTTGAAATCGACCTCTTTCGGCTACCTCTCTGA

Coding sequence (CDS)

CGCAAAGCTGCAACCATCCAGTTCAGAAACTTCAAGTATGATCTGAAATCCAAATTGACAATTCTGCCTACAATTGCACCACCGGACAATGGACTTCCTCTTAAGCCTTTAATATACCATTTGGGAAAGTATACCCTGTCGTTCACTGGCTGTATTCTAAGTAAAGCAAATACTAGAAAGAAAGCAAATGCACTAAGAATGTTAATGGCTGCCCCAACTCCTATGTCCGCGATGGATGCCATATATCCTCTTCAAGGAAATGGAAACTCTGGAATTTCAAAGAATGATGATGGGGAAACCAAACCTCATAAAACATTGCATTTAATTGAAGCAGAAGGAGACGGTCAGGCCCTCCATGCAGGCACCACTCTGTCTAACGGCTCCTTCTTTGAAATCGACCTCTTTCGGCTACCTCTCTGA

Protein sequence

RKAATIQFRNFKYDLKSKLTILPTIAPPDNGLPLKPLIYHLGKYTLSFTGCILSKANTRKKANALRMLMAAPTPMSAMDAIYPLQGNGNSGISKNDDGETKPHKTLHLIEAEGDGQALHAGTTLSNGSFFEIDLFRLPL
Homology
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BLAST of CmUC02G035850 vs. ExPASy TrEMBL
Match: A0A0A9DSS3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.1e-04
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 0 

Query: 2   KAATIQFRNFKYDLKSKLTILPTIAPPDNGLPLKPLIYHLGK 44
           +AA IQF+NFKYDL SKLT   T AP   GL L PL YH GK
Sbjct: 69  RAAGIQFKNFKYDLASKLTNFCTAAPEKIGLSLMPLRYHFGK 110

The following BLAST results are available for this feature:
BLAST of CmUC02G035850 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G035850 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G035850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9DSS38.1e-0464.29Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of CmUC02G035850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G035850.1CmUC02G035850.1mRNA