CmUC02G031100 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G031100
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr02: 5017054 .. 5017392 (+)
RNA-Seq Expression	CmUC02G031100
Synteny	CmUC02G031100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTCTCGAAAGAGAACATGGTCGTTCTTATTGGCCTCCTTTTGTGTAGCATGAAGTTTATTAAAATTGCAAGTGCAATTGGATCCATCAATGAAGGTCCTCTTGGAGATGATATCAATGTTGCATGTAGTCCAAGAAATCCTATAGCTCAAGAACTAGATGATGATGCTAACGAATATGCAAAATGGTACAATTCAATTAATCACTGTGAATCACTACAAGATGGCCAAAAAATGATTCAATATGGAGATGAAGTAAGACATGTGATTGTTCACACCTCAAAAAATGTTGAAGAGGATAAAAATGTTGTTCATCCTCTGCCATATATTGTTTAA

mRNA sequence

ATGGTTGTCTCGAAAGAGAACATGGTCGTTCTTATTGGCCTCCTTTTGTGTAGCATGAAGTTTATTAAAATTGCAAGTGCAATTGGATCCATCAATGAAGGTCCTCTTGGAGATGATATCAATGTTGCATGTAGTCCAAGAAATCCTATAGCTCAAGAACTAGATGATGATGCTAACGAATATGCAAAATGGTACAATTCAATTAATCACTGTGAATCACTACAAGATGGCCAAAAAATGATTCAATATGGAGATGAAGTAAGACATGTGATTGTTCACACCTCAAAAAATGTTGAAGAGGATAAAAATGTTGTTCATCCTCTGCCATATATTGTTTAA

Coding sequence (CDS)

ATGGTTGTCTCGAAAGAGAACATGGTCGTTCTTATTGGCCTCCTTTTGTGTAGCATGAAGTTTATTAAAATTGCAAGTGCAATTGGATCCATCAATGAAGGTCCTCTTGGAGATGATATCAATGTTGCATGTAGTCCAAGAAATCCTATAGCTCAAGAACTAGATGATGATGCTAACGAATATGCAAAATGGTACAATTCAATTAATCACTGTGAATCACTACAAGATGGCCAAAAAATGATTCAATATGGAGATGAAGTAAGACATGTGATTGTTCACACCTCAAAAAATGTTGAAGAGGATAAAAATGTTGTTCATCCTCTGCCATATATTGTTTAA

Protein sequence

MVVSKENMVVLIGLLLCSMKFIKIASAIGSINEGPLGDDINVACSPRNPIAQELDDDANEYAKWYNSINHCESLQDGQKMIQYGDEVRHVIVHTSKNVEEDKNVVHPLPYIV

Homology

[Close]

BLAST of CmUC02G031100 vs. NCBI nr
Match: KGN44636.2 (hypothetical protein Csa_016656 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 1   MVVSKENMVVLIGLLLCSMKFIKIASAIGSINEGPLGDDINVACS-PRNPIAQELDDDAN 60
           MVVSK+NM V IG+LL S+ F++IASA   I     GD+  V C  PR  I  ELDDDA 
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  EYAKWYNSINHCESLQDGQKMIQYGDEVRHVI-VHTSKNVEEDKNVVHPLPYIV 113
           +YA WYN++  C+SL+  +  I  GD+V +   V+TS+NV+ DK+     P+IV
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSIN-GDKVGNTFDVNTSQNVKGDKD-----PHIV 108

[Close]

BLAST of CmUC02G031100 vs. NCBI nr
Match: KAE8646140.1 (hypothetical protein Csa_015664 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12
Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   MVVSKENMVVLIGLLLCSMKFIKIASAIGSINEGPLGDDINVACS-PRNPIAQELDDDAN 60
           MVVSK+NM V IG+LL S+ F++IASA   I   P  D+  V C  PR  I  ELDDDA 
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  EYAKWYNSINHCESLQDGQKMIQYGDEVRHVIVHTSKNVEEDKNVVHPLPYIV 113
           +YA WYN++  C+SL+  +  I          V+TS+NV+ DK+     P+IV
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKD-----PHIV 108

[Close]

BLAST of CmUC02G031100 vs. ExPASy TrEMBL
Match: A0A0A0K605 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 9.0e-14
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 1   MVVSKENMVVLIGLLLCSMKFIKIASAIGSINEGPLGDDINVACS-PRNPIAQELDDDAN 60
           MVVSK+NM V IG+LL S+ F++IASA   I     GD+  V C  PR  I  ELDDDA 
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  EYAKWYNSINHCESLQDGQKMIQYGDEVRHVI-VHTSKNVEEDKNVVHPLPYIV 113
           +YA WYN++  C+SL+  +  I  GD+V +   V+TS+NV+ DK+     P+IV
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSIN-GDKVGNTFDVNTSQNVKGDKD-----PHIV 108

[Close]

BLAST of CmUC02G031100 vs. ExPASy TrEMBL
Match: A0A0A0K3T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270050 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.9e-13
Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   MVVSKENMVVLIGLLLCSMKFIKIASAIGSINEGPLGDDINVACS-PRNPIAQELDDDAN 60
           MVVSK+NM V IG+LL S+ F++IASA   I     GD+  V C  PR  I  ELDDDA 
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  EYAKWYNSINHCESLQDGQKMIQYGDEVRHVIVHTSKNVEEDKNVVHPLPYIV 113
           +YA WYN++  C+SL+  +  I          V+TS+NV+ DK+     P+IV
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKD-----PHIV 108

The following BLAST results are available for this feature:

BLAST of CmUC02G031100 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44636.2	1.9e-13	47.37	hypothetical protein Csa_016656 [Cucumis sativus]	[more]
KAE8646140.1	1.2e-12	45.13	hypothetical protein Csa_015664 [Cucumis sativus]	[more]

BLAST of CmUC02G031100 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G031100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K605	9.0e-14	47.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1	[more]
A0A0A0K3T5	5.9e-13	45.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270050 PE=4 SV=1	[more]

BLAST of CmUC02G031100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G031100.1	CmUC02G031100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046916	cellular transition metal ion homeostasis
biological_process	GO:0051179	localization
cellular_component	GO:0016020	membrane
molecular_function	GO:0046915	transition metal ion transmembrane transporter activity