CmUC02G029950 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G029950
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Location	CmU531Chr02: 3780449 .. 3784718 (-)
RNA-Seq Expression	CmUC02G029950
Synteny	CmUC02G029950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATTTGTCTTGAGGGCCTTGAAACTTTTGTTTTCAAGCGTGGATTTGTATGTAGGGACTTGTAATTTATTTTCGACGTTGATTTGCCTCAATGGCTTTGTGGCTTGTTTTCGTAGTTAGAATTCTTCAGTTTTGAAATCATTTGATCCTTAAAGTACTTTTTGATCTTCAAAAGGGGCTATCCTCTCGATGACAATAGGGATATGGTTGGTTGTTGTAAGCATGAATGGATCGAGAGTAACTTTGTAGTCCTTAAGAAAATTTAACGTCCTAGTTATTTTTTTAGCACAACTATCATAGTGGGAGATTGAATCTCTAATCTCAAAGGAAAAGGGTGCAGCTAAATTAATGTTTATTTCTCGTTTGGGGTTGTTAAATATCTCACGTTGTCAATTGTTGTATTTGTATGTAATATTTTTGGAAAATGTTCAAATTAGTTGAGGATGTTGAAGTAAAACTAAAATGTTGGGGGTAGATGATTAGCTTTTATTATTTTGATGAAGTTTCTTCCAATATCCCACATTGCGTGGGTTATGTTTGTTAAAATGTATAGCGTAAAAGTACTAGATAGTCTTCTATTATTTTCTTATGGGTTACGCGGGTTATAAGATTCTTGTTCTCATGCCATAAACTTGCATGTTACTTAGTTGTCATCCTCTACGTTTTGACATTTATTTTGAATAGTTTATTGGAGTGGACTTAATTGATTGGTTGAAATGTTGGTTCAAAATATAGTGGGGATAAAATAGATTTAAAGTGGATTAATTTAAGATACTAATACTTTAATAAAGTTTAAAGATATTTAGTGTACGTTTGTAATACATTTTTAAGTGTTTAATTTTAAAAACAAGTCATTTTGAACAAATTTGGAGTGTTTGGCAACCACTGTAAACAGATTTTTAAGTGTATTTTAAACCATTGTTATCAAAAAAAGTTCAAATAAAAATAAATTTGAACAATTTGAAAAAAAAAAAAGAATAATTGGTTTTAAGTTAGAGTTTTAAATAAGGTTGTTTTCAAATATAGAAAAATAAACCAAAATATTAACAAAAATAATAATTTTAACTGTCTATCTGCGATGGACTAATCTATGTTCATTTGTTTTATGACAGACGCAGATAGTAGTTTATCGCAAATTATAACATTTTACTATTATTTATAAATATTTTCAATTGTTTTGTTATTTAAAATAATTTTATTTTTAAATATTTAAGTTAGAGTTTTGTAAAAAATAAATTTTTTGAATATATATATTAATTTTTAGGTAAAGTATATTCTTTGGTTTTAAGTTAGAGTTTTAAAGTTAGGAGAAATAGAAATGAAATTATTGAGAAGAATGCCATATTTATTTATGAGGTCATAAAAGGAAAAAAAAGAAAAATAAGCGGGAAAAGAACGAAAAAGAAAAAAAACCCCTTAGCCTCCATCTTCTCTCTATCCCTCTCCCTAGCAGCTGCCAACCCACCCCCGGTTGTAGACATCTTCGCCGGCAACACAGAACACGAGCGACGGCCGGCGAGTCTCCTCCGACAGCGGCGCTTGCTTCTTCTTGGTGCCGACAACCTCAGACCCTGCGAGCCCTTGTGTTGACGGCAGTACCCAAGAAACCCAACCAAGGTGACTGCGTTAGCTTCGTCAGTGTACTCATCTTTCGACGGTGAGCGTCTTCTTCTCCAGCGTTTTTAGTTGGGCTTGCGAACGCTGCACCAGCAGTGGGTTTTGACTAGTTTCGAAGTATTCAATTAAGCCATTAAGGTTCTATTAGTATTAACATATTTCGAACCCTTTCGGACTCAATTTAAAGTGTGTTAGATCAGTCTCTAACACGCTGAAGTTTCTGTTTGTGCCTCAACAATCTCTCGTTTGAGAATTGATTGAATTTTTTTTTTGTATGTTTTTAGTGGTTTTTGCTAAAAGGAAGTATGTGAACATTTTGAATGATTTTTTGGAAGCGTTTTGATTGATTACGAATATAAAATATGTTTTACTTTTAGTTTGGTTACTTATGAATTCTTTTGTAAAGTTTGAATGATTTGGTTTGATGAATTCTTCTATTGAAATTGTTAATTGAAACTACATGCTTTGTTTCACATGCTTGTGTAAGATTTTTGGTTTATTTGAAAGGGCTATTCGAAAATGCCAAGTTTTTGTTTTGAAAATTGTATGCTCATTTTTGTAGTTGCCAAAATTGGAATTGACCACAAATTGATCAATTGAAACTTATTTGTGAGAAGACACGTTTTGCGGTTTGGCGTTCCTTTGGAATGAAGATATCCACATGTGTGTTACACTCATGTGACCTCACATATAATTAATTGAATGTTCTGGGCAGTTGCTGATCGACATCTCCAATTGAATGAATGAATGAATGATTAGTGTTTCCGACAAGTAACCACATATGTCTCAGTTATGCATCTTTTCCACTTTGTAACGCTAGTTGATTGGAAGTTCTCCGATTGAAAGTATTGAAAGTGTTGAAAGATTTGTTTTTATTAGAAGTATAAAATTTTTGTTTCTTTAAAGGTATCGAAAGTTTATTCAAACATTTTGGTTTCTTTGGAACTACTATATGAAAGTTTTAGTTTGAAACATTTAGTTTTAGAAGCTTATATGATTGAAAGATTTTGTTTTGAAAGCACCGTTTGTAAAAAAGTTTTTTACTGAAAGTTTAGCAAGGATGTGTATTTTTGCTTACAAAATTTTTAAAAGAAAATGATTTTCAAAGCTTGATATAGGAATTACTTGTGCAGTACTTTTATACTATTTTTGCTTTTCCAAAATGTTTTCAGATGAGGATTAAGTGATAGTTTTGAAAAAAGTAAAGTTTCGCTTTCTGGCACAAGACATCAAAAGGTGTTTTTGTTTTAAGGATTTGTTAGTTTATCTTAAAAATTGTTTATATTAAATCATTTTCGATGAATTGTATAAATTTGTATACATTGCGATGGTTATGTTTTTGCATTATTGTTTATTATAGCTTTGTTGGAAAATACGGCTGTTACACCACTGAAGCAAGTATCATATTCTATCTTATTCTGAGTAACAATTGAGCTGTTTGATTGAGTTTCGGGCAACTGGGAAATCTTGAAATAACTCGTATGTTAGTTTGTGTGTTTCACATTGATTTTGTAATGGACCGGTACCAATTTTTTTTTCTCTTGTTGCAGTGGTGTTATTAAGCTCTTGCTCTAAGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTTAATCCACTTTTTCTCTAATTTTTTTTTTTTTTTTGTTAAAGTATCGTTGTGGTCCTCATTGAAACTCGTTTCATTTTAGGTACGATTTGTGTTCCTCGGTCCAAGGATCCATTCCATGTTCTACATTACAACACAGCAAGATTCTACAAGTCCACAATCTTTCAGAGACTGCACACAAAGGTACTTTCTACTCATTTGAGACTTTGAATTTGATTGCTCTTACAATCTGATCATTTCAAATTTGCGTTTGTTACTTTAGATCTCCAAAAGGAGTGGAAATCATGTCTATGCTGGGAGAATGGGTTTTAACCATGCATCGGGACGAGATAATCAGCAACTGAGCTTTAATGATGGATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCGTATGGTAATCTTTCACAGCTCTTTCTCCTGCTTTAATCATGAATGTTGGAAATTGAAGATTAGAACTGGTTGCAGTCCTACGATCACTTACTTGTATTTCTGGAGGTATATTTGCCCTGTCTGCTTATGCATAGTGCTCCATATCTATGCTTTATCTGGACATTGAAGCAGTGTTTGTTAAATTGTATTCTTAAAGATGATTAATATGTTTCGTTCATTAAAAAAAAATCATGAATGTTGGATCATCATGTTTAGGATGGTTATGTTTCGAACTTCAGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAATACATTGAATGGCCTAGCTTCCAAAGCACGGTATGGAAGCAAGATTAGTGTGTTAAATATTGCATGTGCATTGTCTTCTTGTAGCTGTAAGATTCATATTTGATCAAATACTTTAATTTATGATGGGACTTCACTCAATATTCTCTCTGAACTTTGGCTTTTATTTTGAATCCAATCCAATTTTGGTGCAGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATTGTAGCACTCTCATCGGTGGACTCGGCGCTCAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCATAA

mRNA sequence

ATGTTGATTTGTCTTGAGGGCCTTGAAACTTTTGTTTTCAAGCGTGGATTTTACCCAAGAAACCCAACCAAGGTGACTGCGTTAGCTTCGTCAGTGTACTCATCTTTCGACGTGGTGTTATTAAGCTCTTGCTCTAAGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTACGATTTGTGTTCCTCGGTCCAAGGATCCATTCCATGTTCTACATTACAACACAGCAAGATTCTACAAGTCCACAATCTTTCAGAGACTGCACACAAAGATCTCCAAAAGGAGTGGAAATCATGTCTATGCTGGGAGAATGGGTTTTAACCATGCATCGGGACGAGATAATCAGCAACTGAGCTTTAATGATGGATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCGTATGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAATACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATTGTAGCACTCTCATCGGTGGACTCGGCGCTCAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCATAA

Coding sequence (CDS)

ATGTTGATTTGTCTTGAGGGCCTTGAAACTTTTGTTTTCAAGCGTGGATTTTACCCAAGAAACCCAACCAAGGTGACTGCGTTAGCTTCGTCAGTGTACTCATCTTTCGACGTGGTGTTATTAAGCTCTTGCTCTAAGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTACGATTTGTGTTCCTCGGTCCAAGGATCCATTCCATGTTCTACATTACAACACAGCAAGATTCTACAAGTCCACAATCTTTCAGAGACTGCACACAAAGATCTCCAAAAGGAGTGGAAATCATGTCTATGCTGGGAGAATGGGTTTTAACCATGCATCGGGACGAGATAATCAGCAACTGAGCTTTAATGATGGATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCGTATGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAATACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATTGTAGCACTCTCATCGGTGGACTCGGCGCTCAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCATAA

Protein sequence

MLICLEGLETFVFKRGFYPRNPTKVTALASSVYSSFDVVLLSSCSKMVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNHASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

Homology

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BLAST of CmUC02G029950 vs. NCBI nr
Match: XP_038888680.1 (uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888682.1 uncharacterized protein LOC120078486 [Benincasa hispida])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 145/159 (91.19%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           MVIASALGAN IGT+C+P+SK+PFHVLHYNTARF KSTI QRLHT+ISKR+G+HVYAGRM
Sbjct: 1   MVIASALGANPIGTVCIPQSKEPFHVLHYNTARFNKSTILQRLHTRISKRTGHHVYAGRM 60

Query: 107 GFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
           GFNH ASG+DNQQLSFND WPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS 205
           STLKTATLALVLVALLIVALSSVDSALSYILTL LRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYILTLFLRRTS 159

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BLAST of CmUC02G029950 vs. NCBI nr
Match: XP_004144859.1 (uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hypothetical protein Csa_020454 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 5.7e-61
Identity = 128/158 (81.01%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           MVI S LG  HIG IC+P+SK+P+HVL YNT R  KS++FQRLHT+ISKRSG+H+YAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 107 GFNHASGRDN-QQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
           GFNHA+   N QQ SFND  PPEPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT 204
           STLKTATLALVLVALLIVALSSVDSALSY+LTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of CmUC02G029950 vs. NCBI nr
Match: XP_022928229.1 (uncharacterized protein LOC111435124 [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 8.3e-60
Identity = 136/186 (73.12%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 23  TKVTALASSVYSS---FDVVLLSSCSKMVIASALGANHIGTICVPRSKDPFHVLHYNTAR 82
           +K   + ++VY     F+  LL+SCS+MVIASALGANHIG   +P S  PFHV  YNTAR
Sbjct: 46  SKGALIVAAVYEKPEIFEWALLNSCSRMVIASALGANHIGMASLPHSNRPFHV-RYNTAR 105

Query: 83  FYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKET 142
             K+ IFQ L T+IS+R G H+YA RMGFNH ASGRDNQQL FND  PPEPFFL +IKET
Sbjct: 106 LNKANIFQGLPTRISRR-GGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET 165

Query: 143 VWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTL 202
           VWGLRSL IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSYILT 
Sbjct: 166 VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTF 225

Query: 203 LLRRTS 205
           +LRRTS
Sbjct: 226 ILRRTS 229

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BLAST of CmUC02G029950 vs. NCBI nr
Match: XP_008447932.1 (PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >KAA0025129.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa] >TYK19371.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-59
Identity = 128/159 (80.50%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           MVI S LG +HIG IC+P+ K  +HVL YN  R  KS++FQRLHT+ISKRSG H+YAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 107 GFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
           GFNH ASG++ QQ SFND WP EPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS 205
           STLKTATLALVLVALLIVALSSVDSALSY+LTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

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BLAST of CmUC02G029950 vs. NCBI nr
Match: KAG6589021.1 (hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-58
Identity = 134/181 (74.03%), Postives = 147/181 (81.22%), Query Frame = 0


Query: 28  LASSVYSS---FDVVLLSSCSKMVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKST 87
           + ++VY     F+  LL+SCS+MVIASALGANHIG   +P S   FHV  YNTAR  K+ 
Sbjct: 45  IVAAVYEKPEIFEWALLNSCSRMVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKAN 104

Query: 88  IFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLR 147
           IFQ L T+IS+R G H+YA RMGFNH ASGRDNQQL FND  PPEPFFL +IKETVWGLR
Sbjct: 105 IFQGLPTRISRR-GGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLR 164

Query: 148 SLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT 205
           SL IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSYILT +LRRT
Sbjct: 165 SLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 223

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BLAST of CmUC02G029950 vs. ExPASy TrEMBL
Match: A0A0A0K1C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.8e-61
Identity = 128/158 (81.01%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           MVI S LG  HIG IC+P+SK+P+HVL YNT R  KS++FQRLHT+ISKRSG+H+YAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 107 GFNHASGRDN-QQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
           GFNHA+   N QQ SFND  PPEPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT 204
           STLKTATLALVLVALLIVALSSVDSALSY+LTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of CmUC02G029950 vs. ExPASy TrEMBL
Match: A0A6J1EK97 (uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC111435124 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.0e-60
Identity = 136/186 (73.12%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 23  TKVTALASSVYSS---FDVVLLSSCSKMVIASALGANHIGTICVPRSKDPFHVLHYNTAR 82
           +K   + ++VY     F+  LL+SCS+MVIASALGANHIG   +P S  PFHV  YNTAR
Sbjct: 46  SKGALIVAAVYEKPEIFEWALLNSCSRMVIASALGANHIGMASLPHSNRPFHV-RYNTAR 105

Query: 83  FYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKET 142
             K+ IFQ L T+IS+R G H+YA RMGFNH ASGRDNQQL FND  PPEPFFL +IKET
Sbjct: 106 LNKANIFQGLPTRISRR-GGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET 165

Query: 143 VWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTL 202
           VWGLRSL IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSYILT 
Sbjct: 166 VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTF 225

Query: 203 LLRRTS 205
           +LRRTS
Sbjct: 226 ILRRTS 229

[Close]

BLAST of CmUC02G029950 vs. ExPASy TrEMBL
Match: A0A1S3BJG9 (uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 8.9e-60
Identity = 128/159 (80.50%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           MVI S LG +HIG IC+P+ K  +HVL YN  R  KS++FQRLHT+ISKRSG H+YAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 107 GFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
           GFNH ASG++ QQ SFND WP EPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS 205
           STLKTATLALVLVALLIVALSSVDSALSY+LTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of CmUC02G029950 vs. ExPASy TrEMBL
Match: A0A5A7SIK1 (Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00250 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 8.9e-60
Identity = 128/159 (80.50%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           MVI S LG +HIG IC+P+ K  +HVL YN  R  KS++FQRLHT+ISKRSG H+YAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 107 GFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
           GFNH ASG++ QQ SFND WP EPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS 205
           STLKTATLALVLVALLIVALSSVDSALSY+LTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of CmUC02G029950 vs. ExPASy TrEMBL
Match: A0A6J1C3M0 (uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008049 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.6e-56
Identity = 122/159 (76.73%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 47  MVIASALGANHIGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRM 106
           M IASALGANHIG IC P  K P H+LH NT RF KS  FQ+L   IS+RSG H+YAGRM
Sbjct: 1   MAIASALGANHIGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRM 60

Query: 107 GFNH-ASGRDNQQLSFNDGWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 166
            FNH ASGR+N QL+FN+ +PPEPF LSLI+E +WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  SFNHAASGRENHQLNFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 167 STLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS 205
           STLKTATL LVLVALLIVALSSVDSALSYILTL+LRR++
Sbjct: 121 STLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST 158

[Close]

BLAST of CmUC02G029950 vs. TAIR 10
Match: AT4G38490.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 64/117 (54.70%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 95  KRSGNHVYAGRMGFNH--ASGRDNQQLSFNDGW-------PPEPFFLSLIKETVWGLRSL 154
           K SG+    GR+   H   SG      S  + W         EP +LSL+++ VW  RSL
Sbjct: 35  KFSGDLSINGRVSHKHVRGSGTVGSVGSARESWSSHKKLPEEEPLWLSLLRDMVWSTRSL 94

Query: 155 LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRR 203
           L F+AEQPSQLKYIEWP+F STLKTATL+L LVA+ IVALSSVD+AL YIL L+LR+
Sbjct: 95  LSFMAEQPSQLKYIEWPTFASTLKTATLSLCLVAVFIVALSSVDAALCYILALILRK 151

The following BLAST results are available for this feature:

BLAST of CmUC02G029950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888680.1	2.1e-71	91.19	uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 unchara...	[more]
XP_004144859.1	5.7e-61	81.01	uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hy...	[more]
XP_022928229.1	8.3e-60	73.12	uncharacterized protein LOC111435124 [Cucurbita moschata]	[more]
XP_008447932.1	1.8e-59	80.50	PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 P...	[more]
KAG6589021.1	1.2e-58	74.03	hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC02G029950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G029950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1C8	2.8e-61	81.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1	[more]
A0A6J1EK97	4.0e-60	73.12	uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC1114351...	[more]
A0A1S3BJG9	8.9e-60	80.50	uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=...	[more]
A0A5A7SIK1	8.9e-60	80.50	Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuw...	[more]
A0A6J1C3M0	4.6e-56	76.73	uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CmUC02G029950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38490.1	1.5e-22	54.70	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 148..200 e-value: 6.5E-8 score: 32.4
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 142..199 e-value: 6.7E-6 score: 27.8
None	No IPR available	PANTHER	PTHR37247	TRANSMEMBRANE PROTEIN	coord: 47..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G029950.1	CmUC02G029950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006605	protein targeting
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0090351	seedling development
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009528	plastid inner membrane
cellular_component	GO:0016020	membrane