CmUC02G029810 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G029810
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Geranylgeranyl pyrophosphate synthase family protein
Location	CmU531Chr02: 3595004 .. 3597876 (-)
RNA-Seq Expression	CmUC02G029810
Synteny	CmUC02G029810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATACAAATACAATAAACTATACTACTTGGCTTATCCATGGCAAGTGCTGATTGCCCGCAATCGCCTTCTCTTCCATCTTCGCGTGCTTATCCTTCTTATTCCATTCCATTTCCACAGAGTTGAGAGAGAGAACTTAGACAATGGCGTTTTCACTCATGGCGGCATCCTCTCTTAGTATGCATTTTGGAAGAAAGACTCCAATTCGATGTTCTTCCTCTTCTTCCTCAGCTGTTTCTTCTCAAGCCAAATCGATTCAGTTTGACCTCAAAACGTACTGGAAACAGCTGATTATCGAGATCAACCAGAAGTTGGATGAAGCTGTTCCAATTCAGTACCCCGACCAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCTCAAGGGGCCAAGCGAGCTCCTCCGGTTATGTGTGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCTTTCCCCACCGCCTGTGCCCTCGAAATGGTTCTTTCTCTTATCTAATTTTACGTTTCTGGGTTGAGAGTTGCTTGAATTCTCGTGTTCTGTTATTTCTTGGGATGCAACTCTAATTTGATTTTGAATTGATCAATTCGAATACTCACTTGCGATTATAATTTCCTGGTTGTATGTGTCATACTTGCAATTTTCTGTAATAGTTCTCTCAATCGTCTCTAATTGTGAAGTTACTTAAGCAAGGCTGTTCAATTCAATCCCTAGCTAAAAATTATAATTAGGTAGGACAAACCCGAGGGATGAGTGGGGGGCAATTCACACAATCTTTTACATTATAGATTCTGGTTCTCAGAGTCAGCGATTCAATACGTTTCAAATTGTGAGAGAACCCTTAAAAGGAGTGTTGCGGGTAGAGAGTTTGATAGAAGATGTAGTGCTGAATATTTCTTGTGTTCTATACTCTTGTCCTAGTTGTGCTTTACTTGGTTATATTCGCTCTAGTTAAATCACCAACAGCCCAAAGGTTTAAGCGGATGAGTTACAATAAATTTTATTATATCAAATACTTCAACAACTCTTATCTGATATCTATATCTATATACATTATTTTTAGAAATACTTGGTGCATTCCAAGATACACTTATCTCTATACATCCCTCTCTCATCACATACACAAAAAGAATTAAAGTATTTAAAGAAAAATTTGCCACGTGGCAAGCTATGATTGGATGATTTGTTGGGATGCACAAAAATGGATGTAGCTTGAGATGCACCTAAGTATTTTTCTATAGTTTTTTGGATCGAAATCTGATATCTGTACTCGTGTGTACTTCTCTTTACTTGTGTTTGAGTACTTAGTAAATAGCCATCCTCAACTAGTCCTTACACCGAGCGCATCTGCTTCATTTTATATTTTGTCCGTCTCTTTATTTCTTTTTACCTGTTTTTACAAGTCCATTAATCTCTTGAACTGATATGGTATCTCATCTCTCTCCAAATGGAAAACTAAGTTATGGTGAGATGCAATCTCTGATCTAACGTTCAAGGGTAGAAGTAAAACTCCTCAATTTTAGCCTTTGGAGATGGTTTTAACCTTTAGGGATTGAGAGAGCTTATTAATTCTTTGTGATATCAAAGTCAATGTCATAGATAATATGTACCTATGTAACAACCTACTGTGTGTCACTAGATTATTTTCAATAGCTCTTATCAACACATTTCAATTTAGTACCACAAATTGATCATGGGTCTTTTGACAGGTTCATGAAGCTTCGTTGATCCATGATGACCTTCCTTGCATGGATGATGATCCCTCACGGCGTGGCCAACCTTCAAACCATGCAGTTTATGGTGTTGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTTGGCTTCCAACATATTGTCTCACACACACCCTTTGATCTTGTTCCCGAGTCTCGCCTGCTCCGTGTGGTTGCTGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGACCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGTGAACTGGCTCAGTGTTCTGCAGTATGTGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGATACAGAGATTAAGAAGGTACGGAAGATCGGTTGGTGTGTTGTATCAGGTAGTTGATGATATTTTGGAAGAACAATCGAAAAAACTCGAAGAAACAAATAAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAAGCTAAGGAGGTGGCAGAGGAACTGAGGACCAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGATAAAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTCAGTTTTGAAACTTCAAGTTGATGAGAAGAGGATGGGATCCCCTTCATTCTGAAAATGGGATAGTTTACTAGTTAACCATTATCTTTGGAAAATATGAAGGCAACAGGAACAGGATAGGACCGTGTTGATGAAATCACGCAGCCTTGACCCGAGCGCTGGAGAAAAGTTCTCAGTAGATCGAGTTACGGAGAAAAGTTTTTATCAATAGGTCGATATTTCTGTTGATATTTTTCATAATTTGAAAGAAAAGTATACATAGTTTCTAAAATGTTGGGGAAAAGTTTTATCAATACGTCGATATTTTTATAACTTGAAAGGAAAGTATGTATAGTTTCTGAAATGCTGGAGAAATGTAGACAAAATATTGAAAATGTTGAAAAATAGTAGAGGTACCAACCAGATAAATCTGAATACCAAAAATGAACACTTTGAGGATTTAGTACCATTGCCTTGATTTATCTCAAAGTTATGAGTTAAAAAAGGCAGTATTTGTTACTAAAGTGCATGGTTAAGG

mRNA sequence

AAAATACAAATACAATAAACTATACTACTTGGCTTATCCATGGCAAGTGCTGATTGCCCGCAATCGCCTTCTCTTCCATCTTCGCGTGCTTATCCTTCTTATTCCATTCCATTTCCACAGAGTTGAGAGAGAGAACTTAGACAATGGCGTTTTCACTCATGGCGGCATCCTCTCTTAGTATGCATTTTGGAAGAAAGACTCCAATTCGATGTTCTTCCTCTTCTTCCTCAGCTGTTTCTTCTCAAGCCAAATCGATTCAGTTTGACCTCAAAACGTACTGGAAACAGCTGATTATCGAGATCAACCAGAAGTTGGATGAAGCTGTTCCAATTCAGTACCCCGACCAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCTCAAGGGGCCAAGCGAGCTCCTCCGGTTATGTGTGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCTTTCCCCACCGCCTGTGCCCTCGAAATGGTTCATGAAGCTTCGTTGATCCATGATGACCTTCCTTGCATGGATGATGATCCCTCACGGCGTGGCCAACCTTCAAACCATGCAGTTTATGGTGTTGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTTGGCTTCCAACATATTGTCTCACACACACCCTTTGATCTTGTTCCCGAGTCTCGCCTGCTCCGTGTGGTTGCTGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGACCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGTGAACTGGCTCAGTGTTCTGCAGTATGTGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGATACAGAGATTAAGAAGGTACGGAAGATCGGTTGGTGTGTTGTATCAGGTAGTTGATGATATTTTGGAAGAACAATCGAAAAAACTCGAAGAAACAAATAAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAAGCTAAGGAGGTGGCAGAGGAACTGAGGACCAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGATAAAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTCAGTTTTGAAACTTCAAGTTGATGAGAAGAGGATGGGATCCCCTTCATTCTGAAAATGGGATAGTTTACTAGTTAACCATTATCTTTGGAAAATATGAAGGCAACAGGAACAGGATAGGACCGTGTTGATGAAATCACGCAGCCTTGACCCGAGCGCTGGAGAAAAGTTCTCAGTAGATCGAGTTACGGAGAAAAGTTTTTATCAATAGGTCGATATTTCTGTTGATATTTTTCATAATTTGAAAGAAAAGTATACATAGTTTCTAAAATGTTGGGGAAAAGTTTTATCAATACGTCGATATTTTTATAACTTGAAAGGAAAGTATGTATAGTTTCTGAAATGCTGGAGAAATGTAGACAAAATATTGAAAATGTTGAAAAATAGTAGAGGTACCAACCAGATAAATCTGAATACCAAAAATGAACACTTTGAGGATTTAGTACCATTGCCTTGATTTATCTCAAAGTTATGAGTTAAAAAAGGCAGTATTTGTTACTAAAGTGCATGGTTAAGG

Coding sequence (CDS)

ATGGCGTTTTCACTCATGGCGGCATCCTCTCTTAGTATGCATTTTGGAAGAAAGACTCCAATTCGATGTTCTTCCTCTTCTTCCTCAGCTGTTTCTTCTCAAGCCAAATCGATTCAGTTTGACCTCAAAACGTACTGGAAACAGCTGATTATCGAGATCAACCAGAAGTTGGATGAAGCTGTTCCAATTCAGTACCCCGACCAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCTCAAGGGGCCAAGCGAGCTCCTCCGGTTATGTGTGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCTTTCCCCACCGCCTGTGCCCTCGAAATGGTTCATGAAGCTTCGTTGATCCATGATGACCTTCCTTGCATGGATGATGATCCCTCACGGCGTGGCCAACCTTCAAACCATGCAGTTTATGGTGTTGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTTGGCTTCCAACATATTGTCTCACACACACCCTTTGATCTTGTTCCCGAGTCTCGCCTGCTCCGTGTGGTTGCTGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGACCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGTGAACTGGCTCAGTGTTCTGCAGTATGTGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGATACAGAGATTAAGAAGGTACGGAAGATCGGTTGGTGTGTTGTATCAGGTAGTTGATGATATTTTGGAAGAACAATCGAAAAAACTCGAAGAAACAAATAAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAAGCTAAGGAGGTGGCAGAGGAACTGAGGACCAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGATAAAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTCAGTTTTGAAACTTCAAGTTGA

Protein sequence

MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS

Homology

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BLAST of CmUC02G029810 vs. NCBI nr
Match: XP_038888577.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 641.3 bits (1653), Expect = 4.5e-180
Identity = 325/335 (97.01%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKS+QFDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSLQFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGRSVGVLYQVVDDILEEQSKK +ET++SKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRSVGVLYQVVDDILEEQSKKPDETDESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           KKELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KKELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. NCBI nr
Match: TYK23377.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 624.4 bits (1609), Expect = 5.7e-175
Identity = 317/335 (94.63%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSLS  FGRKTPIRCSSSSSSA+SSQ KS+ FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           V IQYP+QIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL ET +SKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLNETTESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. NCBI nr
Match: XP_008447910.1 (PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 621.3 bits (1601), Expect = 4.8e-174
Identity = 316/335 (94.33%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSLS  FGRKTPIRCSSSSSSA+SSQ KS+ FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           V IQYP+QIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQ KKFGE+AQCSAVCGGLLAGAED EIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGAEDPEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ETN+SKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. NCBI nr
Match: XP_004144868.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis sativus] >KGN43285.1 hypothetical protein Csa_020394 [Cucumis sativus])

HSP 1 Score: 614.0 bits (1582), Expect = 7.7e-172
Identity = 312/335 (93.13%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSL+  F RKTPIRCSSSSS A+SSQ +SI FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           VP+QYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ T++SKR KGKSYV VYGIEKAKEVAEELR KA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. NCBI nr
Match: XP_023529740.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 605.1 bits (1559), Expect = 3.6e-169
Identity = 305/337 (90.50%), Postives = 326/337 (96.74%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRC--SSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLD 60
           MAFS+MAASSL M+FG K  IRC  SSSSSSAVSSQAKSIQFDLKTYWK+LI+EINQKLD
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLD 91

Query: 61  EAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEAS 120
           EAVPIQYPDQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH AS
Sbjct: 92  EAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS 151

Query: 121 LIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 180
           LIHDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL
Sbjct: 152 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 211

Query: 181 RVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEI 240
           RVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGE++QCSAVCGGLLAGAEDHE+
Sbjct: 212 RVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEV 271

Query: 241 QRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRT 300
           QRLRRYGR+VGVLYQVVDDI +EQ+KKL++T++SK++KGKSYVGVYGIEKAKEVAEELRT
Sbjct: 272 QRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRT 331

Query: 301 KAKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           KAKKELEGFEKYGD+VMPLYSFVDYAADRSFS E+S+
Sbjct: 332 KAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 368

[Close]

BLAST of CmUC02G029810 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-112
Identity = 217/315 (68.89%), Postives = 246/315 (78.10%), Query Frame = 0


Query: 19  TPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVL 78
           +P    SSSSSA      S+ FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYSVL
Sbjct: 28  SPAAIRSSSSSAPG----SLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVL 87

Query: 79  AQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPS 138
           AQGAKRAPPVMCVAACELFG DRLAAFPTACALEMVH ASLIHDDLPCMDDDP RRG+PS
Sbjct: 88  AQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPS 147

Query: 139 NHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQF 198
           NH VYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIAR VGS GMAAGQ+
Sbjct: 148 NHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQY 207

Query: 199 LDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDI 258
           +DLEGGP  + FVQEKKFG + +CSAVCGGLL GA + E+Q LRRYGR+VG+LYQVVDDI
Sbjct: 208 VDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI 267

Query: 259 LEEQSKKLEETNKSKRKKGKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GDKV 318
            E+              K KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD +
Sbjct: 268 TED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTL 322

Query: 319 MPLYSFVDYAADRSF 330
           +PLY+FVDYAA R F
Sbjct: 328 VPLYTFVDYAAHRHF 322

[Close]

BLAST of CmUC02G029810 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 256.5 bits (654), Expect = 4.1e-67
Identity = 148/327 (45.26%), Postives = 208/327 (63.61%), Query Frame = 0


Query: 22  RCSSSSSSAVSS----------QAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYE 81
           R  SSSSS VSS          Q++   FD  +Y       +N+ LD AVP++ P +I+E
Sbjct: 46  RTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHE 105

Query: 82  AMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDP 141
           AMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLPCMD+D 
Sbjct: 106 AMRYSLLA-GGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDD 165

Query: 142 SRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSR 201
            RRG+P+NH V+G D+A+LAGDAL    F+H+ S T  D+V   R++R V E+A+A+G+ 
Sbjct: 166 LRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTE 225

Query: 202 GMAAGQFLDL--EG------GPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRR 261
           G+ AGQ +D+  EG      G   +EF+   K   L + SAV G ++ G  D EI+RLR+
Sbjct: 226 GLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRK 285

Query: 262 YGRSVGVLYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 321
           + R +G+L+QVVDDIL+  + SK+L +T  K       +Y  + G+EK++E AE+L  +A
Sbjct: 286 FARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREA 345

Query: 322 KKELEGFEKYGDKVMPLYSFVDYAADR 328
           + +L GF+   DKV PL +  +Y A R
Sbjct: 346 RDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]

BLAST of CmUC02G029810 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.1e-67
Identity = 144/320 (45.00%), Postives = 211/320 (65.94%), Query Frame = 0


Query: 24  SSSSSSAVSSQ-----AKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVL 83
           SSSSSS ++ +     + S  FD  +Y  +    +N+ LD AVP++ P +I+EAMRYS+L
Sbjct: 49  SSSSSSLITKEDNNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLL 108

Query: 84  AQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPS 143
           A G KR  PV+C+AACEL G +   A P  CA+EM+H  SLIHDDLPCMD+D  RRG+P+
Sbjct: 109 A-GGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 168

Query: 144 NHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQF 203
           NH VYG D+A+LAGDAL    F+H+ S T  ++ P +R++R V E+A+A+G+ G+ AGQ 
Sbjct: 169 NHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSP-ARVVRAVGELAKAIGTEGLVAGQV 228

Query: 204 LDL--EG------GPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGV 263
           +D+  EG      G   ++F+   K   L + SAV GG++ G  D EI+RLR++ R +G+
Sbjct: 229 VDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGL 288

Query: 264 LYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGF 323
           L+QVVDDIL+  + S++L +T  K       +Y  + G+EK++E AE+L T+A+ +L GF
Sbjct: 289 LFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGF 348

Query: 324 EKYGDKVMPLYSFVDYAADR 328
           +   DKV PL +  +Y A+R
Sbjct: 349 D--SDKVAPLLALANYIANR 364

[Close]

BLAST of CmUC02G029810 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-63
Identity = 140/336 (41.67%), Postives = 212/336 (63.10%), Query Frame = 0


Query: 10  SLSMHFGRKTPIRCSSSSSSAVSSQAKSIQ---------FDLKTYWKQLIIEINQKLDEA 69
           SL++ F  +   R  SS S+ ++ + +++Q         FD K+Y  Q    INQ L+ A
Sbjct: 38  SLAISFAYRKSERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAA 97

Query: 70  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 129
           +P+Q P +I+E+MRYS+LA G KR  P +C+AACEL G +   A P ACA+EM+H  SLI
Sbjct: 98  IPLQEPAKIHESMRYSLLA-GGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLI 157

Query: 130 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 189
           HDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    F+HI   T    V  +R++R 
Sbjct: 158 HDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTL--NVSSARIVRA 217

Query: 190 VAEIARAVGSRGMAAGQFLDLEGGPNS------VEFVQEKKFGELAQCSAVCGGLLAGAE 249
           V E+A+A+G+ G+ AGQ +D+    +S      +EF+   K  +L + + V G +L G  
Sbjct: 218 VGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGT 277

Query: 250 DHEIQRLRRYGRSVGVLYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKE 309
           D E+++LR+Y R +G+L+QVVDDIL+  + S++L +T  K       +Y  + GIEK++E
Sbjct: 278 DEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSRE 337

Query: 310 VAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADR 328
            AE+L  +A+++L GF+   +K  PL +  +Y A R
Sbjct: 338 FAEKLNKEAQEQLAGFDP--EKAAPLIALANYIAHR 368

[Close]

BLAST of CmUC02G029810 vs. ExPASy Swiss-Prot
Match: P80042 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.4e-62
Identity = 140/336 (41.67%), Postives = 208/336 (61.90%), Query Frame = 0


Query: 9   SSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQ-------FDLKTYWKQLIIEINQKLDEAV 68
           S ++    +K P    + S+ A + + + I+       F+ K Y  +  I +N+ LDEA+
Sbjct: 38  SKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAI 97

Query: 69  PIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIH 128
            ++ P  I+EAMRYS+LA G KR  P++C+AACEL G ++  A   ACA+EM+H  SLIH
Sbjct: 98  IVKEPHVIHEAMRYSLLA-GGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIH 157

Query: 129 DDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVV 188
           DDLPCMD+D  RRG+P+NH +YG D+A+LAGD+L    F+HIV+ T    V  SR++  V
Sbjct: 158 DDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAG--VTPSRIVGAV 217

Query: 189 AEIARAVGSRGMAAGQFLDLEGGPN------SVEFVQEKKFGELAQCSAVCGGLLAGAED 248
           AE+A+++G+ G+ AGQ  D++   N      ++EF+   K   L + S V G +L G  +
Sbjct: 218 AELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTN 277

Query: 249 HEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRK----KGKSYVGVYGIEKAKE 308
            E+++LRR+ R +G+L+QVVDDIL + +K  EE  K+  K       +Y  + G+EKAKE
Sbjct: 278 VEVEKLRRFARCIGLLFQVVDDIL-DVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKE 337

Query: 309 VAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADR 328
            A EL  +AK++LEGF+    K  PL +  DY A R
Sbjct: 338 FAAELNREAKQQLEGFD--SRKAAPLIALADYIAYR 367

[Close]

BLAST of CmUC02G029810 vs. ExPASy TrEMBL
Match: A0A5D3DIC5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004430 PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 2.8e-175
Identity = 317/335 (94.63%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSLS  FGRKTPIRCSSSSSSA+SSQ KS+ FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           V IQYP+QIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL ET +SKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLNETTESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. ExPASy TrEMBL
Match: A0A1S3BJF3 (LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490255 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.3e-174
Identity = 316/335 (94.33%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSLS  FGRKTPIRCSSSSSSA+SSQ KS+ FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           V IQYP+QIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQ KKFGE+AQCSAVCGGLLAGAED EIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGAEDPEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ETN+SKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. ExPASy TrEMBL
Match: A0A0A0K0P7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G017680 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.7e-172
Identity = 312/335 (93.13%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSL+  F RKTPIRCSSSSS A+SSQ +SI FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           VP+QYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ T++SKR KGKSYV VYGIEKAKEVAEELR KA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of CmUC02G029810 vs. ExPASy TrEMBL
Match: A0A6J1EJ23 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435051 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.0e-169
Identity = 305/339 (89.97%), Postives = 326/339 (96.17%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRC----SSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQK 60
           MAFS+MAASSL M+FG K  IRC    SSSSSSAVSSQAKSIQFDLKTYWK+LI+EINQK
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQK 91

Query: 61  LDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHE 120
           LDEAVPIQYPDQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH 
Sbjct: 92  LDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA 151

Query: 121 ASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESR 180
           ASLIHDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESR
Sbjct: 152 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESR 211

Query: 181 LLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDH 240
           LLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGE++QCSAVCGGLLAGAEDH
Sbjct: 212 LLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDH 271

Query: 241 EIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEEL 300
           E+QRLRRYGR+VGVLYQVVDDI +EQ+KKL++T++SK++KGKSYVGVYGIEKAKEVAEEL
Sbjct: 272 EVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEEL 331

Query: 301 RTKAKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           RTKAKKELEGFEKYGD+VMPLYSFVDYAADRSFS E+S+
Sbjct: 332 RTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 370

[Close]

BLAST of CmUC02G029810 vs. ExPASy TrEMBL
Match: A0A6J1JQ91 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486485 PE=3 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.5e-168
Identity = 303/336 (90.18%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAFSLMAASSLSMHFGRKTPIRC-SSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDE 60
           MAFS+MAASSL M+FG K  IRC SSSSSSAVSSQAKSI FDLKTYWK+LI+EINQKLDE
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSAVSSQAKSIHFDLKTYWKKLILEINQKLDE 91

Query: 61  AVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASL 120
           AVPIQYPDQIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH ASL
Sbjct: 92  AVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASL 151

Query: 121 IHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLR 180
           IHDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLR
Sbjct: 152 IHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLR 211

Query: 181 VVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQ 240
           VVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGE++QCSAVCGGLLAGAEDHE+Q
Sbjct: 212 VVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQ 271

Query: 241 RLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTK 300
           RLRRYGR+VGVLYQVVDDI +EQ+KKL++T++SK++KGKSYV VYGIEKAKEVAEELRTK
Sbjct: 272 RLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVRVYGIEKAKEVAEELRTK 331

Query: 301 AKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           AKKELEGFEKYGD+VMPLYSFVDYAADRSFS E+S+
Sbjct: 332 AKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 367

[Close]

BLAST of CmUC02G029810 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 406.8 bits (1044), Expect = 1.7e-113
Identity = 217/315 (68.89%), Postives = 246/315 (78.10%), Query Frame = 0


Query: 19  TPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVL 78
           +P    SSSSSA      S+ FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYSVL
Sbjct: 28  SPAAIRSSSSSAPG----SLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVL 87

Query: 79  AQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPS 138
           AQGAKRAPPVMCVAACELFG DRLAAFPTACALEMVH ASLIHDDLPCMDDDP RRG+PS
Sbjct: 88  AQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPS 147

Query: 139 NHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQF 198
           NH VYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIAR VGS GMAAGQ+
Sbjct: 148 NHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQY 207

Query: 199 LDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDI 258
           +DLEGGP  + FVQEKKFG + +CSAVCGGLL GA + E+Q LRRYGR+VG+LYQVVDDI
Sbjct: 208 VDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI 267

Query: 259 LEEQSKKLEETNKSKRKKGKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GDKV 318
            E+              K KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD +
Sbjct: 268 TED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTL 322

Query: 319 MPLYSFVDYAADRSF 330
           +PLY+FVDYAA R F
Sbjct: 328 VPLYTFVDYAAHRHF 322

[Close]

BLAST of CmUC02G029810 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 256.5 bits (654), Expect = 2.9e-68
Identity = 148/327 (45.26%), Postives = 208/327 (63.61%), Query Frame = 0


Query: 22  RCSSSSSSAVSS----------QAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYE 81
           R  SSSSS VSS          Q++   FD  +Y       +N+ LD AVP++ P +I+E
Sbjct: 46  RTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHE 105

Query: 82  AMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDP 141
           AMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLPCMD+D 
Sbjct: 106 AMRYSLLA-GGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDD 165

Query: 142 SRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSR 201
            RRG+P+NH V+G D+A+LAGDAL    F+H+ S T  D+V   R++R V E+A+A+G+ 
Sbjct: 166 LRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTE 225

Query: 202 GMAAGQFLDL--EG------GPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRR 261
           G+ AGQ +D+  EG      G   +EF+   K   L + SAV G ++ G  D EI+RLR+
Sbjct: 226 GLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRK 285

Query: 262 YGRSVGVLYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 321
           + R +G+L+QVVDDIL+  + SK+L +T  K       +Y  + G+EK++E AE+L  +A
Sbjct: 286 FARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREA 345

Query: 322 KKELEGFEKYGDKVMPLYSFVDYAADR 328
           + +L GF+   DKV PL +  +Y A R
Sbjct: 346 RDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]

BLAST of CmUC02G029810 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 133/306 (43.46%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 33  SQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVA 92
           S  ++  FD K+Y  +    ++  L+ +VP+Q P  I EA+RYS+LA G KR  P++C+A
Sbjct: 54  SNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLA-GGKRVRPLLCIA 113

Query: 93  ACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAG 152
           ACEL G D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH  +G DMA+LAG
Sbjct: 114 ACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAG 173

Query: 153 DALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL--------EGG 212
           DAL  L F+H ++     LV   R++R V E+A+A+G++G+ AGQ  DL        + G
Sbjct: 174 DALLALAFEH-MTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVG 233

Query: 213 PNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDILE--EQ 272
              +EF+   K   L + +AV G ++ G  + EI++LR+Y R +G+L+QVVDDIL+  E 
Sbjct: 234 LERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTES 293

Query: 273 SKKLEETNKSKRKKGK-SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVMPLYSFV 328
           +K+L +T       GK +Y  + G+E+++EVAE+LR +A ++L GF+   DK  PL +  
Sbjct: 294 TKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SDKAAPLVALA 353

[Close]

BLAST of CmUC02G029810 vs. TAIR 10
Match: AT2G18620.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-63
Identity = 129/300 (43.00%), Postives = 192/300 (64.00%), Query Frame = 0


Query: 40  FDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGV 99
           FD  +Y       +N+ LD AV ++ P +I+EA+RYS+LA+G KR  PV+C+AACEL G 
Sbjct: 53  FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARG-KRVRPVLCIAACELVGG 112

Query: 100 DRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLG 159
           +   A P ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    
Sbjct: 113 EESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFA 172

Query: 160 FQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGG---PNSV-----EFV 219
           F+H+ + T    V  +R++R + E+A+A+GS+G+ AGQ +DL  G    N V     EF+
Sbjct: 173 FEHLATST---AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFI 232

Query: 220 QEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNK 279
              K   L + + V G ++ G  D E+++LRR+ R +G+L+QVVDDIL + +K  EE  K
Sbjct: 233 HVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDIL-DVTKSSEELGK 292

Query: 280 SKRK----KGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADR 328
           +  K       +Y  + G+EK+K+ A++L + A ++L GF+    +V PL +  +Y A R
Sbjct: 293 TAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFD--SSRVKPLLALANYIAKR 345

[Close]

BLAST of CmUC02G029810 vs. TAIR 10
Match: AT3G14550.1 (geranylgeranyl pyrophosphate synthase 3 )

HSP 1 Score: 238.4 bits (607), Expect = 8.2e-63
Identity = 141/331 (42.60%), Postives = 200/331 (60.42%), Query Frame = 0


Query: 22  RCSSSSSSAVSSQA-------------KSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQ 81
           R   S SSA++SQ               +  FD K Y  +    +N  LD +VP++ P  
Sbjct: 33  RTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIRKAESVNAALDVSVPLREPLT 92

Query: 82  IYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMD 141
           + EA+RYS+LA G KR  P++C+A CEL G D   A   ACA+EM+H +SLIHDDLPCMD
Sbjct: 93  VQEAVRYSLLA-GGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMD 152

Query: 142 DDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAV 201
           +   RRG+P+NH VYG DMA+LAGDAL  L F+H ++     LV   R++R V E+ARA+
Sbjct: 153 NADLRRGKPTNHKVYGEDMAVLAGDALLALAFEH-MTFVSSGLVAPERMIRAVVELARAI 212

Query: 202 GSRGMAAGQFLDLEG--------GPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 261
           G+ G+ AGQ +DL          G   +EF+   K   L + +AV G ++ G  + EI++
Sbjct: 213 GTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEK 272

Query: 262 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRK---KGK-SYVGVYGIEKAKEVAEEL 321
           LR+Y R +G+L+QVVDDIL + +K  EE  K+  K    GK +Y  + G+E++KEVAE+L
Sbjct: 273 LRKYARCIGLLFQVVDDIL-DVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKL 332

Query: 322 RTKAKKELEGFEKYGDKVMPLYSFVDYAADR 328
           R +A+++L GF+    K  PL +   Y A R
Sbjct: 333 RREAEEQLLGFDP--SKAAPLVALASYIACR 358

The following BLAST results are available for this feature:

BLAST of CmUC02G029810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888577.1	4.5e-180	97.01	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
TYK23377.1	5.7e-175	94.63	heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ...	[more]
XP_008447910.1	4.8e-174	94.33	PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synth...	[more]
XP_004144868.1	7.7e-172	93.13	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_023529740.1	3.6e-169	90.50	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of CmUC02G029810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39108	2.4e-112	68.89	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
P34802	4.1e-67	45.26	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q43133	4.1e-67	45.00	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
Q94ID7	1.6e-63	41.67	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
P80042	1.4e-62	41.67	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 ...	[more]

BLAST of CmUC02G029810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DIC5	2.8e-175	94.63	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel...	[more]
A0A1S3BJF3	2.3e-174	94.33	LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small s...	[more]
A0A0A0K0P7	3.7e-172	93.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G017680 PE=3 SV=1	[more]
A0A6J1EJ23	3.0e-169	89.97	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A6J1JQ91	2.5e-168	90.18	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of CmUC02G029810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38460.1	1.7e-113	68.89	geranylgeranyl reductase	[more]
AT4G36810.1	2.9e-68	45.26	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G29430.1	1.6e-63	43.46	Terpenoid synthases superfamily protein	[more]
AT2G18620.1	6.3e-63	43.00	Terpenoid synthases superfamily protein	[more]
AT3G14550.1	8.2e-63	42.60	geranylgeranyl pyrophosphate synthase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 286..306
None	No IPR available	COILS	Coil	Coil	coord: 256..276
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 70..314 e-value: 3.784E-44 score: 145.9
None	No IPR available	PANTHER	PTHR43281:SF5	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC	coord: 17..330
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 17..330
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 68..301 e-value: 1.5E-33 score: 116.0
IPR000092	Polyprenyl synthetase	CDD	cd00685	Trans_IPPS_HT	coord: 66..327 e-value: 1.60203E-59 score: 190.07
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 39..335 e-value: 1.3E-84 score: 285.9
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 43..310
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 119..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G029810.1	CmUC02G029810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0004659	prenyltransferase activity