CmUC02G029120 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G029120
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description40S ribosomal protein S11-like
LocationCmU531Chr02: 3068832 .. 3071876 (-)
RNA-Seq ExpressionCmUC02G029120
SyntenyCmUC02G029120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGTTAAAGCCCATTTATTGTCGTCTGCTCTATAACTCTCCGAAGCAGGTTTAGGGTTTCAGTAATCGAACTCCTCTCCTTCGGCCGCCTGAGCAAAGACCAGAACGCGTGCTCTCTTCAGAATCCCTAATCATGGCGGAACAGGTTTCTATTCAATCGCCAACATTCACTTCTGTTCCCGTCTATTATGTTTGTTTCATTTTATTCACTTTAACGTTCTATCTCCCAACTCTTCATTCTTTTTCTACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTGTTTCTCTGGTAAGCCCGCCCAATTGAAATATTATTTTGTTGTCAGTTTTAGATTGACATTTATTTAGGTTCTTATTTCTTGAACTGTTGTTCTTATTTGCTGTAATCCTGATTTTATTTTCTGATTTTGATTATTGTTCTTTTTTGGATAAAAAAATAGCTCTAAAAAGGCTGGGAAAGGGAAGAGACCTGGAAAGGGTGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACGCCAAGAGAAGCCATTGAAGGTTCGGTTTTTTTACAACTCTGATCACTTTGTGTTTGTTGGATTGTTAATATGAATGTGTTTAGCCCTTAATTAATTCTTAATTTTATATAGCGCTTAATTAATTCTTATAACATGATGAATGCTATTTAAATCAGCAGTCTTGTTGGAATGCTTATTTAAGTGCTATTTTGTTCCAATGCTGAGAGCATATAATTCTGTTAAAGAATATATTGGAAAAACAGTATGAGTTGAAGGGATAGTTGTGTTGAGGGTTTTATTACATTTTATTTAAAATGGGTCTATGTTTCTGCATAGATACAATGGCGTTTCCTACTTGATGGATGGTTGAGGGAGTTTGCAAAATAAAGGGCTTATGTTGATGGAATGATGCTTATCTTAGTAGACTCTCCAACTAATTATGCATCATATAAAGGAATCGTCATGACATCTCATTTATTGAGAGATTAAGATTGAATGCGGAAATGCTAATACCCCGTATCCCCTTTCTAGGCTTGGTCCCGTCACTTATCCTGTGTACTTTATGCATCCTGGCTTACCTTGCTATCATGTTCTTTGAATTGTTGCTGTGAATAAGGATGCATCCTGTAAATGGGAATTTCTGAGCAATACAGCAATCCTCATTTACCCTATGTAGTTGTGTTGAGGGTTTTATTACATTTTATTTAAAATGGGTCTATGTTTCTGCATAGATACAATGGCGTTTCCTACTTGATGGATGGTTGAGGGAGTTTGCAAAATAAAGGGCTTATGTTGATGGAATGATGCTTATCTTAGTAGACTCTCCAACTAATTATGCATCATATAAAGGAATCGTCATGACATCTCATTTATTGAGAGATTAAGATTGAATGCGGAAATGCTAATACCCCGTATCCCCTTTCTAGGCTTGGTCCCGTCACTTATCCTGTGTACTTTATGCATCCTGGCTTACCTTGCTATCATGTTCTTTGAATTGTTGCTGTGAATAAGGATGCATCCTGTAAATGGGAATTTCTGAGCAATACAGCAATCCTCATTTACCCTATGTAGTTGTGTTGAGGGTTTTATTACATTTTATTTAAAATGGGTCTATGTTTCTGCATAGATACAATGGCGTTTCCTACTTGATGGATGGTTGAGGGAGTTTGCAAAATAAAGGGCTTATGTTGATGGAATGATGCTTATCTTAGTAGACTCTCCAACTAATTATGCATCATATAAAGGAATCGTCATGACATCTCATTTATTGAGAGATTAAGATTGAATGCGGAAATGCTAATACCCCGTATCCCCTTTCTAGGCTTGGTCCCGTCACTTATCCTGTGTACTTTATGCATCCTGGCTTACCTTGCTATCATGTTCTTTGAATTGTTGCTGTGAATAAGGATGCATCCTGTAAATGGGAATTTCTGAGCAATACAGCAATCCTCATTTACCCTATGTAGTTGTGTTGAGGGTTTTATTACATTTTATTTAAAATGGGTCTATGTTTCTGCATAGATACAATGGCGTTTCCTACTTGATGGATGGTTGAGGGAGTTTGCAAAATAAAGGGCTTATGTTGATGGAATGATGCTTATCTTAGTAGACTCTCCAACTAATTATGCATCATATAAAGGAATCGTCATGACATCTCATTTATTGAGAGATTAAGATTGAATGCGGAAATGCTAATACCCCGTATCCCCTTTCTAGGCTTGGTCCCGTCACTTATCCTGTGTACTTTATGCATCCTGGCTTACCTTGCTATCATGTTCTTTGAATTGTTGCTGTGAATAAGGATGCATCCTGTAAATGGGAATTTCTGAGCAATACAGCAATCCTCATTTACCCTATGTATTGTATGCATCTTTATCTCTACATTTCTAAGGCATAATATTTAGGCATATTTTGCTGTTTTCTTATGTTCTTTTGAATTGTTGCTGAATATTAGAATGCTATTTACTTAATGATTATTTGAATTCTGCTATATTTGTACAGGAACATATATTGATAAGAAATGCCCCTTCACTGGAACTGTCTCGGTCAGGGGACGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTTAGGACCATAATTGTCAGGAGGAACTACTTACATTATGTTAAGAAGTATCAGAGGTACTTTCCTGAGCCCCCCACCCCCACCCGAGCTGCTCTTTTTTCTTTGTGGTTCAATATATTTTGTTTCTTCTGTTGTTATCCAAAAAATATATTTTGTTTCTTCTGTCTCCTTCAGGTATGAGAAAAGGCACTCCAACATTCCTGCTCACATATCTCCTTGCTTTCGTGTGAAGGAGGGAGATCATGTTATTATTGGCCAATGCAGGTACATAAAGATTCGAGGAATTCTTTCCATTGGTTGTTTTTGTTGTATGTTTTCTTTTGAAGAGAACTTGTTGAACATTTACTGTTTGAATTTCAGGCCATTGTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCCGGAATTTAA

mRNA sequence

CAAGTTAAAGCCCATTTATTGTCGTCTGCTCTATAACTCTCCGAAGCAGGTTTAGGGTTTCAGTAATCGAACTCCTCTCCTTCGGCCGCCTGAGCAAAGACCAGAACGCGTGCTCTCTTCAGAATCCCTAATCATGGCGGAACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTGTTTCTCTGCTCTAAAAAGGCTGGGAAAGGGAAGAGACCTGGAAAGGGTGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACGCCAAGAGAAGCCATTGAAGGAACATATATTGATAAGAAATGCCCCTTCACTGGAACTGTCTCGGTCAGGGGACGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTTAGGACCATAATTGTCAGGAGGAACTACTTACATTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCCAACATTCCTGCTCACATATCTCCTTGCTTTCGTGTGAAGGAGGGAGATCATGTTATTATTGGCCAATGCAGGCCATTGTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCCGGAATTTAA

Coding sequence (CDS)

ATGGCGGAACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTGTTTCTCTGCTCTAAAAAGGCTGGGAAAGGGAAGAGACCTGGAAAGGGTGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACGCCAAGAGAAGCCATTGAAGGAACATATATTGATAAGAAATGCCCCTTCACTGGAACTGTCTCGGTCAGGGGACGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTTAGGACCATAATTGTCAGGAGGAACTACTTACATTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCCAACATTCCTGCTCACATATCTCCTTGCTTTCGTGTGAAGGAGGGAGATCATGTTATTATTGGCCAATGCAGGCCATTGTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCCGGAATTTAA

Protein sequence

MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Homology
[Close]
BLAST of CmUC02G029120 vs. NCBI nr
Match: XP_038887258.1 (40S ribosomal protein S11-like [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 3.4e-85
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. NCBI nr
Match: XP_022952178.1 (40S ribosomal protein S11-like [Cucurbita moschata] >XP_022969280.1 40S ribosomal protein S11-like [Cucurbita maxima] >KAG7011817.1 40S ribosomal protein S11-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.4 bits (825), Expect = 2.2e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. NCBI nr
Match: KAG6572178.1 (Glutamate receptor 3.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.4 bits (825), Expect = 2.2e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1    MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
            MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCP
Sbjct: 1522 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 1581

Query: 61   FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
            FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 1582 FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 1641

Query: 121  GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
            GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 1642 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 1680

[Close]
BLAST of CmUC02G029120 vs. NCBI nr
Match: XP_023554629.1 (40S ribosomal protein S11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 8.3e-84
Identity = 154/159 (96.86%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK GKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAF GI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFTGI 159

[Close]
BLAST of CmUC02G029120 vs. NCBI nr
Match: XP_008447825.1 (PREDICTED: 40S ribosomal protein S11-like [Cucumis melo] >TYK23274.1 40S ribosomal protein S11-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83
Identity = 154/159 (96.86%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KGKRPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy Swiss-Prot
Match: P25460 (40S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-81
Identity = 145/156 (92.95%), Postives = 153/156 (98.08%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGK+PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRI+AGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAF 157
           GDHVIIGQCRPLSKTVRFNV+KVIPAGS++ GKKAF
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAF 156

[Close]
BLAST of CmUC02G029120 vs. ExPASy Swiss-Prot
Match: Q9M5M1 (40S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-81
Identity = 146/159 (91.82%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK GKGKRPGKGGNRFWKSIGLGFKTPREAI+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS   KKAF  I
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy Swiss-Prot
Match: P17093 (40S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2)

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-81
Identity = 146/159 (91.82%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL +KK GKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTG VS+RGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS  KKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy Swiss-Prot
Match: P16181 (40S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-80
Identity = 144/160 (90.00%), Postives = 154/160 (96.25%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGKRPGKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]
BLAST of CmUC02G029120 vs. ExPASy Swiss-Prot
Match: P42733 (40S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-80
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK +GKGKRPGKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy TrEMBL
Match: A0A6J1HZI1 (40S ribosomal protein S11-like OS=Cucurbita maxima OX=3661 GN=LOC111468334 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy TrEMBL
Match: A0A6J1GJT3 (40S ribosomal protein S11-like OS=Cucurbita moschata OX=3662 GN=LOC111454930 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy TrEMBL
Match: A0A5D3DI18 (40S ribosomal protein S11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003300 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84
Identity = 154/159 (96.86%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KGKRPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy TrEMBL
Match: A0A1S3BHR3 (40S ribosomal protein S11-like OS=Cucumis melo OX=3656 GN=LOC103490202 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84
Identity = 154/159 (96.86%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KGKRPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of CmUC02G029120 vs. ExPASy TrEMBL
Match: A0A2P5DDD1 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_074430 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 152/159 (95.60%), Postives = 155/159 (97.48%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+ KGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSSKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS  GKKAF GI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 159

[Close]
BLAST of CmUC02G029120 vs. TAIR 10
Match: AT3G48930.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 300.4 bits (768), Expect = 8.3e-82
Identity = 144/160 (90.00%), Postives = 154/160 (96.25%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGKRPGKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]
BLAST of CmUC02G029120 vs. TAIR 10
Match: AT5G23740.1 (ribosomal protein S11-beta )

HSP 1 Score: 300.4 bits (768), Expect = 8.3e-82
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK +GKGKRPGKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]
BLAST of CmUC02G029120 vs. TAIR 10
Match: AT4G30800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 298.9 bits (764), Expect = 2.4e-81
Identity = 143/159 (89.94%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGKRPGKGGNRFWK+IGLGFKTPREAIEGTYID+KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRIL+GTCHSAKM RTIIVRR+YLH+VKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GD V IGQCRPLSKTVRFNVLKVIPAGSSS GKKAF G+
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159

The following BLAST results are available for this feature:
BLAST of CmUC02G029120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887258.13.4e-8598.7440S ribosomal protein S11-like [Benincasa hispida][more]
XP_022952178.12.2e-8497.4840S ribosomal protein S11-like [Cucurbita moschata] >XP_022969280.1 40S ribosoma... [more]
KAG6572178.12.2e-8497.48Glutamate receptor 3.2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023554629.18.3e-8496.8640S ribosomal protein S11-like [Cucurbita pepo subsp. pepo][more]
XP_008447825.11.9e-8396.86PREDICTED: 40S ribosomal protein S11-like [Cucumis melo] >TYK23274.1 40S ribosom... [more]
BLAST of CmUC02G029120 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P254601.1e-8192.9540S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1[more]
Q9M5M11.4e-8191.8240S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1[more]
P170934.0e-8191.8240S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2[more]
P161811.2e-8090.0040S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1[more]
P427331.2e-8089.9440S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2[more]
BLAST of CmUC02G029120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HZI11.1e-8497.4840S ribosomal protein S11-like OS=Cucurbita maxima OX=3661 GN=LOC111468334 PE=3 ... [more]
A0A6J1GJT31.1e-8497.4840S ribosomal protein S11-like OS=Cucurbita moschata OX=3662 GN=LOC111454930 PE=... [more]
A0A5D3DI189.0e-8496.8640S ribosomal protein S11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BHR39.0e-8496.8640S ribosomal protein S11-like OS=Cucumis melo OX=3656 GN=LOC103490202 PE=3 SV=1[more]
A0A2P5DDD11.3e-8295.60Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_074430 PE=3 SV=... [more]
BLAST of CmUC02G029120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48930.18.3e-8290.00Nucleic acid-binding, OB-fold-like protein [more]
AT5G23740.18.3e-8289.94ribosomal protein S11-beta [more]
AT4G30800.12.4e-8189.94Nucleic acid-binding, OB-fold-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 131..138
score: 73.25
coord: 121..131
score: 60.91
coord: 88..111
score: 37.33
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 74..142
e-value: 7.1E-26
score: 90.1
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 1..159
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..158
e-value: 2.2E-83
score: 279.9
NoneNo IPR availablePANTHERPTHR10744:SF2440S RIBOSOMAL PROTEIN S11-1-RELATEDcoord: 1..159
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 4..72
e-value: 4.1E-31
score: 107.2
IPR028333Ribosomal protein S17, archaeal/eukaryoticTIGRFAMTIGR03630TIGR03630coord: 54..143
e-value: 3.9E-34
score: 114.7
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 121..133
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 68..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G029120.1CmUC02G029120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome