CmUC01G018540 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G018540
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmU531Chr01: 31796860 .. 31798812 (-)
RNA-Seq ExpressionCmUC01G018540
SyntenyCmUC01G018540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCGTTGACTCCATGTCTCAACCGTTTTTCAAAGCCATCAACTGTCACTTTGTGGAACTCCACCATAAGAGACGCTGTAAATCAAGGCAATGCGTACAAAGCCCTCGTTCTTTTCCGTCAAATGAAGCAAAATGATCTACAACCAAACAATTTTACATTTCCCTTCTTGGCAAAAGCTTGCGCCAAGCTCTCCCATCTCACTAACTCCCAAATCATCCATACCCATGTCGTCAAATCCCCATACCACTCTGATATCTTTGTTCAGACGGCCATGGTTGATATGTATGTGAAGTGTGGTAAAGTGGAGGACGCATATAACTTGTTTGATAAAATGCCTGTTAGGGATATTGCATCATGGAACGCTATGATTATTGGGTTTTCTCATATTGGCTCCCTTGATAGAGTTTTCAGTCTGTTTTTTGGGATGAGATTAGTGGGAATTCGGCCAGATCCTGCTACTATCATTGGATTGACTCGAGCAGTTTTATCTGCCAAAAGTTCAAGATTTTTGAAAGCTGTTCATGCTCTTGGGATTGAAACAGGCTTAGATGCTGACACCTCAGTTTCTAATACTTGGATTGCTGCCTATTCCAAATGCGGTGAACTGCAGCTTGCAGAGATGGTGTTCCATGGGATTCAAATGAACGCAAGATCTTCTGTCTCGTGGAATTCATTGATTGCATGCTATGCAAACTTTGGGAAGTATGTGGATGCTGTAAATACTTACAAAGGATTGCTCTGTGATGGGTTTAAGCCTGATGCAAGTACGATGATTAGCTTGCTTTCTTCTTGCCAGCAACCTGAAGCACTAATTTATGGTTCCCTTATTCATGGTCATGGTTTCCAATTAGGATGCGATTCAGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTACAATTTTGTTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACGGCCATGATTAGTGGGTATAGTGAGGTGGGGCGATTTGATGATGCCTTGGTGTTATTTAATGCTATGGAAGAAACTGGAGAAAAACCTGATATAGTTACAGTTCTTTCCCTAATATCAGGCTGCGGTAAAACAGGGGCACTTGGGCTTGGACATTGGATTGAGAACTATGCATCTGTATATGGATTGAAAAAAGATGTAGTTTGTAATGCATTGATAGACATGTATGCAAAATGTGGGAGTTTGAATGATGCTCGAGAGGTATTTTATAGTTTGCCTAATAAAACTGTTGTCTCCTGGACAGCCATGATTGCAGCTTGTGCCCTGAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTATCTGATGTCAGGGTCGGGAATAGAGCCAAACAATATCACGTTTCTAGCTGTTCTTCAAGCTTGCTCTCATGGTGGCTACCTCGAGAAAGGGAGGGAATGTTTTATGATGATGACTGAAAGATATGGTATAAATCCTGGTTTGGATCATTATTCCTGCATGATCGATCTTCTTGGAAGGAGAGGGAAGCTAATTGAAGCATTGGAGGTTATTCGAGATATGCCTATGAAACCTGATGAGGGCGTATGGGGTGCATTACTTGGTGCTTGTAAGATTCACAACAACATGCAAATCGGCGAGTATGTGTCTCATCATCTCTTTGAATTACAGCCGCTGGTTGCAGTTTCGTTTGTTGAGATGGCTAATATATATGCATCAGTTGGAAGATGGGATGGAGTTGCAGCTATGAGAAAAACGATGAGATCAAACAAAATGAGGAAATCTCCTGGGAAAAGCATTGTTCAAGTGAATGGAAAGTCACACGTGTTTTTTGTTGAGGACAGAAGCCATCATGATAGTTTGCTTATTTATGCAGTGTTAGAGAATTTAGCAATGCAGATGAAACAAAAAGAATTCTCGTCAGATGCTCAGAGAATTGCTGAGCTTGATATGGAATGA

mRNA sequence

ATGTCTTCGTTGACTCCATGTCTCAACCGTTTTTCAAAGCCATCAACTGTCACTTTGTGGAACTCCACCATAAGAGACGCTGTAAATCAAGGCAATGCGTACAAAGCCCTCGTTCTTTTCCGTCAAATGAAGCAAAATGATCTACAACCAAACAATTTTACATTTCCCTTCTTGGCAAAAGCTTGCGCCAAGCTCTCCCATCTCACTAACTCCCAAATCATCCATACCCATGTCGTCAAATCCCCATACCACTCTGATATCTTTGTTCAGACGGCCATGGTTGATATGTATGTGAAGTGTGGTAAAGTGGAGGACGCATATAACTTGTTTGATAAAATGCCTGTTAGGGATATTGCATCATGGAACGCTATGATTATTGGGTTTTCTCATATTGGCTCCCTTGATAGAGTTTTCAGTCTGTTTTTTGGGATGAGATTAGTGGGAATTCGGCCAGATCCTGCTACTATCATTGGATTGACTCGAGCAGTTTTATCTGCCAAAAGTTCAAGATTTTTGAAAGCTGTTCATGCTCTTGGGATTGAAACAGGCTTAGATGCTGACACCTCAGTTTCTAATACTTGGATTGCTGCCTATTCCAAATGCGGTGAACTGCAGCTTGCAGAGATGGTGTTCCATGGGATTCAAATGAACGCAAGATCTTCTGTCTCGTGGAATTCATTGATTGCATGCTATGCAAACTTTGGGAAGTATGTGGATGCTGTAAATACTTACAAAGGATTGCTCTGTGATGGGTTTAAGCCTGATGCAAGTACGATGATTAGCTTGCTTTCTTCTTGCCAGCAACCTGAAGCACTAATTTATGGTTCCCTTATTCATGGTCATGGTTTCCAATTAGGATGCGATTCAGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTACAATTTTGTTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACGGCCATGATTAGTGGGTATAGTGAGGTGGGGCGATTTGATGATGCCTTGGTGTTATTTAATGCTATGGAAGAAACTGGAGAAAAACCTGATATAGTTACAGTTCTTTCCCTAATATCAGGCTGCGGTAAAACAGGGGCACTTGGGCTTGGACATTGGATTGAGAACTATGCATCTGTATATGGATTGAAAAAAGATGTAGTTTGTAATGCATTGATAGACATGTATGCAAAATGTGGGAGTTTGAATGATGCTCGAGAGGTATTTTATAGTTTGCCTAATAAAACTGTTGTCTCCTGGACAGCCATGATTGCAGCTTGTGCCCTGAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTATCTGATGTCAGGGTCGGGAATAGAGCCAAACAATATCACGTTTCTAGCTGTTCTTCAAGCTTGCTCTCATGGTGGCTACCTCGAGAAAGGGAGGGAATGTTTTATGATGATGACTGAAAGATATGGTATAAATCCTGGTTTGGATCATTATTCCTGCATGATCGATCTTCTTGGAAGGAGAGGGAAGCTAATTGAAGCATTGGAGGTTATTCGAGATATGCCTATGAAACCTGATGAGGGCGTATGGGGTGCATTACTTGGTGCTTGTAAGATTCACAACAACATGCAAATCGGCGAGTATGTGTCTCATCATCTCTTTGAATTACAGCCGCTGGTTGCAGTTTCGTTTGTTGAGATGGCTAATATATATGCATCAGTTGGAAGATGGGATGGAGTTGCAGCTATGAGAAAAACGATGAGATCAAACAAAATGAGGAAATCTCCTGGGAAAAGCATTGTTCAAGTGAATGGAAAGTCACACGTGTTTTTTGTTGAGGACAGAAGCCATCATGATAGTTTGCTTATTTATGCAGTGTTAGAGAATTTAGCAATGCAGATGAAACAAAAAGAATTCTCGTCAGATGCTCAGAGAATTGCTGAGCTTGATATGGAATGA

Coding sequence (CDS)

ATGTCTTCGTTGACTCCATGTCTCAACCGTTTTTCAAAGCCATCAACTGTCACTTTGTGGAACTCCACCATAAGAGACGCTGTAAATCAAGGCAATGCGTACAAAGCCCTCGTTCTTTTCCGTCAAATGAAGCAAAATGATCTACAACCAAACAATTTTACATTTCCCTTCTTGGCAAAAGCTTGCGCCAAGCTCTCCCATCTCACTAACTCCCAAATCATCCATACCCATGTCGTCAAATCCCCATACCACTCTGATATCTTTGTTCAGACGGCCATGGTTGATATGTATGTGAAGTGTGGTAAAGTGGAGGACGCATATAACTTGTTTGATAAAATGCCTGTTAGGGATATTGCATCATGGAACGCTATGATTATTGGGTTTTCTCATATTGGCTCCCTTGATAGAGTTTTCAGTCTGTTTTTTGGGATGAGATTAGTGGGAATTCGGCCAGATCCTGCTACTATCATTGGATTGACTCGAGCAGTTTTATCTGCCAAAAGTTCAAGATTTTTGAAAGCTGTTCATGCTCTTGGGATTGAAACAGGCTTAGATGCTGACACCTCAGTTTCTAATACTTGGATTGCTGCCTATTCCAAATGCGGTGAACTGCAGCTTGCAGAGATGGTGTTCCATGGGATTCAAATGAACGCAAGATCTTCTGTCTCGTGGAATTCATTGATTGCATGCTATGCAAACTTTGGGAAGTATGTGGATGCTGTAAATACTTACAAAGGATTGCTCTGTGATGGGTTTAAGCCTGATGCAAGTACGATGATTAGCTTGCTTTCTTCTTGCCAGCAACCTGAAGCACTAATTTATGGTTCCCTTATTCATGGTCATGGTTTCCAATTAGGATGCGATTCAGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTACAATTTTGTTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACGGCCATGATTAGTGGGTATAGTGAGGTGGGGCGATTTGATGATGCCTTGGTGTTATTTAATGCTATGGAAGAAACTGGAGAAAAACCTGATATAGTTACAGTTCTTTCCCTAATATCAGGCTGCGGTAAAACAGGGGCACTTGGGCTTGGACATTGGATTGAGAACTATGCATCTGTATATGGATTGAAAAAAGATGTAGTTTGTAATGCATTGATAGACATGTATGCAAAATGTGGGAGTTTGAATGATGCTCGAGAGGTATTTTATAGTTTGCCTAATAAAACTGTTGTCTCCTGGACAGCCATGATTGCAGCTTGTGCCCTGAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTATCTGATGTCAGGGTCGGGAATAGAGCCAAACAATATCACGTTTCTAGCTGTTCTTCAAGCTTGCTCTCATGGTGGCTACCTCGAGAAAGGGAGGGAATGTTTTATGATGATGACTGAAAGATATGGTATAAATCCTGGTTTGGATCATTATTCCTGCATGATCGATCTTCTTGGAAGGAGAGGGAAGCTAATTGAAGCATTGGAGGTTATTCGAGATATGCCTATGAAACCTGATGAGGGCGTATGGGGTGCATTACTTGGTGCTTGTAAGATTCACAACAACATGCAAATCGGCGAGTATGTGTCTCATCATCTCTTTGAATTACAGCCGCTGGTTGCAGTTTCGTTTGTTGAGATGGCTAATATATATGCATCAGTTGGAAGATGGGATGGAGTTGCAGCTATGAGAAAAACGATGAGATCAAACAAAATGAGGAAATCTCCTGGGAAAAGCATTGTTCAAGTGAATGGAAAGTCACACGTGTTTTTTGTTGAGGACAGAAGCCATCATGATAGTTTGCTTATTTATGCAGTGTTAGAGAATTTAGCAATGCAGATGAAACAAAAAGAATTCTCGTCAGATGCTCAGAGAATTGCTGAGCTTGATATGGAATGA

Protein sequence

MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIENYASVYGLKKDVVCNALIDMYAKCGSLNDAREVFYSLPNKTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHNNMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELDME
Homology
BLAST of CmUC01G018540 vs. NCBI nr
Match: XP_038881350.1 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Benincasa hispida])

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 592/637 (92.94%), Postives = 607/637 (95.29%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           MSSL P LNRFSK STV  WNS+IRDAVNQGNAYKALVLFRQMK N LQPNNFTFPFLAK
Sbjct: 1   MSSLPPRLNRFSKLSTVIWWNSSIRDAVNQGNAYKALVLFRQMKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           A AKLSHLTNSQIIHTHVVKSP+HSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS
Sbjct: 61  ASAKLSHLTNSQIIHTHVVKSPFHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMIIGFSHIGSLDRVFSLF GMRLVGIRPD AT+IGLTRAVLSAKS RFLKAVHA+ I
Sbjct: 121 WNAMIIGFSHIGSLDRVFSLFMGMRLVGIRPDAATVIGLTRAVLSAKSLRFLKAVHAIAI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDADTSVSNTWIA YSKCGELQLA+MVF+GIQ N RSSVSWNSLIACYANFGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAGYSKCGELQLAKMVFYGIQKNVRSSVSWNSLIACYANFGKYVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VNTYKGLL DGF PDAST+ISLLS CQQPEALIYGSLIH HGFQLGCDSDISLIN LISM
Sbjct: 241 VNTYKGLLSDGFTPDASTIISLLSCCQQPEALIYGSLIHAHGFQLGCDSDISLINALISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDA+VLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRIDDAMVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGAL LGHWI+NYASVYGLKKD VVCNALIDMYAKCGSLNDAR+VFYSLPN
Sbjct: 361 LSLISGCGKTGALELGHWIDNYASVYGLKKDVVVCNALIDMYAKCGSLNDARKVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLFYLMS SGIEPNNITFLAVLQACSHGG+LEKG+E 
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFYLMSESGIEPNNITFLAVLQACSHGGFLEKGKEY 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVI DMPMKPDEG+WGALL ACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIHDMPMKPDEGIWGALLSACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWD VAAMRKTMRSNKMRKSPGKS+V
Sbjct: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDEVAAMRKTMRSNKMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKE 637
           QVNGKSHVFFVEDRSHHDSL IYAVL NLAMQMKQKE
Sbjct: 601 QVNGKSHVFFVEDRSHHDSLHIYAVLGNLAMQMKQKE 637

BLAST of CmUC01G018540 vs. NCBI nr
Match: XP_008440673.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 584/649 (89.98%), Postives = 611/649 (94.14%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           M SLTP LNRFSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGK EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMI+GFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLA+MVFHGIQ NARSSVSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA T+ISLL SCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++GLKKD VVCNALIDMYAKCGSLNDAREVFYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS HLFELQP VA SFVEMANIYA VGRWD VAAMRK MRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELD 649
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQRI ELD
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRIIELD 649

BLAST of CmUC01G018540 vs. NCBI nr
Match: XP_008440672.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 584/651 (89.71%), Postives = 612/651 (94.01%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           M SLTP LNRFSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGK EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMI+GFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLA+MVFHGIQ NARSSVSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA T+ISLL SCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++GLKKD VVCNALIDMYAKCGSLNDAREVFYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS HLFELQP VA SFVEMANIYA VGRWD VAAMRK MRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELDME 651
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQRI ELD +
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRIIELDTD 651

BLAST of CmUC01G018540 vs. NCBI nr
Match: KAA0036256.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12650.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 584/649 (89.98%), Postives = 611/649 (94.14%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           M SLTP LNRFSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGK EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMI+GFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLA+MVFHGIQ NARSSVSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA T+ISLL SCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++GLKKD VVCNALIDMYAKCGSLNDAREVFYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS HLFELQP VA SFVEMANIYA VGRWD VAAMRK MRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELD 649
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQRI ELD
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRIIELD 649

BLAST of CmUC01G018540 vs. NCBI nr
Match: XP_004143574.1 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus] >XP_031743718.1 pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus] >XP_031743719.1 pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus])

HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 582/649 (89.68%), Postives = 613/649 (94.45%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           MS+LT  LN FSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFL+K
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGKV+DAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMIIGFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAV+SAKS RFLKAVHA+GI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDADTSVSNTWIAAYSKCGELQLA+MVFHGIQ  ARSSVSWNSLIACYA+FGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           V +YKGLLCDGFKPDAST+ISLLSSCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++ LKKD VVCNALIDMYAKCGSLNDARE+FYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS +LFELQP VAVSFVEMANIYASVGRWD VAAMRKTMRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELD 649
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQR  ELD
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRWVELD 649

BLAST of CmUC01G018540 vs. ExPASy Swiss-Prot
Match: P0C8Q2 (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 7.9e-200
Identity = 340/637 (53.38%), Postives = 449/637 (70.49%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           MS +   L R S  S+V  WN  IR+AVN+ +  ++L+LFR+MK+   +PNNFTFPF+AK
Sbjct: 1   MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACA+L+ +   +++H H++KSP+ SD+FV TA VDM+VKC  V+ A  +F++MP RD  +
Sbjct: 61  ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAM+ GF   G  D+ FSLF  MRL  I PD  T++ L ++    KS + L+A+HA+GI
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
             G+D   +V+NTWI+ Y KCG+L  A++VF  I    R+ VSWNS+   Y+ FG+  DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
              Y  +L + FKPD ST I+L +SCQ PE L  G LIH H   LG D DI  INT ISM
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YS+  D  SA +LFD M+ RTCVSWT MISGY+E G  D+AL LF+AM ++GEKPD+VT+
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD--VVCNALIDMYAKCGSLNDAREVFYSLP 420
           LSLISGCGK G+L  G WI+  A +YG K+D  ++CNALIDMY+KCGS+++AR++F + P
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420

Query: 421 NKTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRE 480
            KTVV+WT MIA  ALNG F EAL LF  M     +PN+ITFLAVLQAC+H G LEKG E
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480

Query: 481 CFMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIH 540
            F +M + Y I+PGLDHYSCM+DLLGR+GKL EALE+IR+M  KPD G+WGALL ACKIH
Sbjct: 481 YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540

Query: 541 NNMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSI 600
            N++I E  +  LF L+P +A  +VEMANIYA+ G WDG A +R  M+   ++K PG+S+
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESV 600

Query: 601 VQVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQK 636
           +QVNGK+H F V +  H ++ +IY  L  L++  K K
Sbjct: 601 IQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637

BLAST of CmUC01G018540 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.9e-117
Identity = 226/627 (36.04%), Postives = 346/627 (55.18%), Query Frame = 0

Query: 19  LWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIHTHV 78
           L+++ ++      +  KAL  F +M+ +D++P  + F +L K C   + L   + IH  +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161

Query: 79  VKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLDRVF 138
           VKS +  D+F  T + +MY KC +V +A  +FD+MP RD+ SWN ++ G+S  G      
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 139 SLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTWIAAY 198
            +   M    ++P   TI+ +  AV + +     K +H   + +G D+  ++S   +  Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281

Query: 199 SKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKPDAST 258
           +KCG L+ A  +F G  M  R+ VSWNS+I  Y       +A+  ++ +L +G KP   +
Sbjct: 282 AKCGSLETARQLFDG--MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 341

Query: 259 MISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMS 318
           ++  L +C     L  G  IH    +LG D ++S++N+LISMY +C ++ +A  +F  + 
Sbjct: 342 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 401

Query: 319 IRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHW 378
            RT VSW AMI G+++ GR  DAL  F+ M     KPD  T +S+I+   +        W
Sbjct: 402 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 461

Query: 379 IENYASVYGLKKDV-VCNALIDMYAKCGSLNDAREVFYSLPNKTVVSWTAMIAACALNGE 438
           I        L K+V V  AL+DMYAKCG++  AR +F  +  + V +W AMI     +G 
Sbjct: 462 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 521

Query: 439 FREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRECFMMMTERYGINPGLDHYS 498
            + AL+LF  M    I+PN +TFL+V+ ACSH G +E G +CF MM E Y I   +DHY 
Sbjct: 522 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 581

Query: 499 CMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHNNMQIGEYVSHHLFELQPL 558
            M+DLLGR G+L EA + I  MP+KP   V+GA+LGAC+IH N+   E  +  LFEL P 
Sbjct: 582 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 641

Query: 559 VAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIVQVNGKSHVFFVEDRSHHD 618
                V +ANIY +   W+ V  +R +M    +RK+PG S+V++  + H FF    +H D
Sbjct: 642 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 701

Query: 619 SLLIYAVLENLAMQMKQKEFSSDAQRI 645
           S  IYA LE L   +K+  +  D   +
Sbjct: 702 SKKIYAFLEKLICHIKEAGYVPDTNLV 726

BLAST of CmUC01G018540 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-109
Identity = 212/650 (32.62%), Postives = 359/650 (55.23%), Query Frame = 0

Query: 16  TVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIH 75
           T  ++NS IR   + G   +A++LF +M  + + P+ +TFPF   ACAK     N   IH
Sbjct: 98  TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 76  THVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLD 135
             +VK  Y  D+FVQ ++V  Y +CG+++ A  +FD+M  R++ SW +MI G++      
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 136 RVFSLFFGM-RLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTW 195
               LFF M R   + P+  T++ +  A    +     + V+A    +G++ +  + +  
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 196 IAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKP 255
           +  Y KC  + +A+ +F   +  A +    N++ + Y   G   +A+  +  ++  G +P
Sbjct: 278 VDMYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 337

Query: 256 DASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 315
           D  +M+S +SSC Q   +++G   HG+  + G +S  ++ N LI MY +C    +A  +F
Sbjct: 338 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 397

Query: 316 DGMSIRTCVSWTAMISGYSEVGR-------------------------------FDDALV 375
           D MS +T V+W ++++GY E G                                F++A+ 
Sbjct: 398 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 457

Query: 376 LFNAME-ETGEKPDIVTVLSLISGCGKTGALGLGHWIENYASVYGLKKDV-VCNALIDMY 435
           +F +M+ + G   D VT++S+ S CG  GAL L  WI  Y    G++ DV +   L+DM+
Sbjct: 458 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 517

Query: 436 AKCGSLNDAREVFYSLPNKTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFL 495
           ++CG    A  +F SL N+ V +WTA I A A+ G    A++LF  M   G++P+ + F+
Sbjct: 518 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 577

Query: 496 AVLQACSHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPM 555
             L ACSHGG +++G+E F  M + +G++P   HY CM+DLLGR G L EA+++I DMPM
Sbjct: 578 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 637

Query: 556 KPDEGVWGALLGACKIHNNMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAM 615
           +P++ +W +LL AC++  N+++  Y +  +  L P    S+V ++N+YAS GRW+ +A +
Sbjct: 638 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 697

Query: 616 RKTMRSNKMRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQ 632
           R +M+   +RK PG S +Q+ GK+H F   D SH +   I A+L+ ++ +
Sbjct: 698 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745

BLAST of CmUC01G018540 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.2e-108
Identity = 211/635 (33.23%), Postives = 339/635 (53.39%), Query Frame = 0

Query: 19  LWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIHTHV 78
           +WN+  R      +   AL L+  M    L PN++TFPF+ K+CAK       Q IH HV
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160

Query: 79  VKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLDRVF 138
           +K     D++V T+++ MYV+ G++EDA+ +FDK P RD+ S+ A+I G++  G ++   
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220

Query: 139 SLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTWIAAY 198
            LF                                                         
Sbjct: 221 KLF--------------------------------------------------------- 280

Query: 199 SKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKPDAST 258
                           ++  +  VSWN++I+ YA  G Y +A+  +K ++    +PD ST
Sbjct: 281 ---------------DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 340

Query: 259 MISLLSSCQQPEALIYGSLIH----GHGFQLGCDSDISLINTLISMYSRCGDISSATILF 318
           M++++S+C Q  ++  G  +H     HGF     S++ ++N LI +YS+CG++ +A  LF
Sbjct: 341 MVTVVSACAQSGSIELGRQVHLWIDDHGF----GSNLKIVNALIDLYSKCGELETACGLF 400

Query: 319 DGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALG 378
           + +  +  +SW  +I GY+ +  + +AL+LF  M  +GE P+ VT+LS++  C   GA+ 
Sbjct: 401 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 460

Query: 379 LGHWIENYAS--VYGL-KKDVVCNALIDMYAKCGSLNDAREVFYSLPNKTVVSWTAMIAA 438
           +G WI  Y    + G+     +  +LIDMYAKCG +  A +VF S+ +K++ SW AMI  
Sbjct: 461 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 520

Query: 439 CALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRECFMMMTERYGINP 498
            A++G    + DLF  M   GI+P++ITF+ +L ACSH G L+ GR  F  MT+ Y + P
Sbjct: 521 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 580

Query: 499 GLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHNNMQIGEYVSHHL 558
            L+HY CMIDLLG  G   EA E+I  M M+PD  +W +LL ACK+H N+++GE  + +L
Sbjct: 581 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 640

Query: 559 FELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIVQVNGKSHVFFVE 618
            +++P    S+V ++NIYAS GRW+ VA  R  +    M+K PG S ++++   H F + 
Sbjct: 641 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 659

Query: 619 DRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAE 647
           D+ H  +  IY +LE + + +++  F  D   + +
Sbjct: 701 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659

BLAST of CmUC01G018540 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 6.6e-106
Identity = 228/683 (33.38%), Postives = 354/683 (51.83%), Query Frame = 0

Query: 1   MSSLTPCLNRF-SKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLA 60
           +S     L RF    + V  WNS IR   + G A K L LF  M      P+N+TFPF+ 
Sbjct: 75  LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVF 134

Query: 61  KACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIA 120
           KAC ++S +   +  H   + + + S++FV  A+V MY +C  + DA  +FD+M V D+ 
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194

Query: 121 SWNAMIIGFSHIGSLDRVFSLFFGM-RLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHAL 180
           SWN++I  ++ +G       +F  M    G RPD  T++ +     S  +    K +H  
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254

Query: 181 GIETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYV 240
            + + +  +  V N  +  Y+KCG +  A  VF    M+ +  VSWN+++A Y+  G++ 
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFS--NMSVKDVVSWNAMVAGYSQIGRFE 314

Query: 241 DAVNTY-----------------------------------KGLLCDGFKPDASTMISLL 300
           DAV  +                                   + +L  G KP+  T+IS+L
Sbjct: 315 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 374

Query: 301 SSCQQPEALIYGSLIHGHGFQLGCD-------SDISLINTLISMYSRCGDISSATILFDG 360
           S C    AL++G  IH +  +   D        +  +IN LI MY++C  + +A  +FD 
Sbjct: 375 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 434

Query: 361 MS--IRTCVSWTAMISGYSEVGRFDDALVLFNAM--EETGEKPDIVTVLSLISGCGKTGA 420
           +S   R  V+WT MI GYS+ G  + AL L + M  E+   +P+  T+   +  C    A
Sbjct: 435 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 494

Query: 421 LGLGHWIENYA--SVYGLKKDVVCNALIDMYAKCGSLNDAREVFYSLPNKTVVSWTAMIA 480
           L +G  I  YA  +        V N LIDMYAKCGS++DAR VF ++  K  V+WT+++ 
Sbjct: 495 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 554

Query: 481 ACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRECFMMMTERYGIN 540
              ++G   EAL +F  M   G + + +T L VL ACSH G +++G E F  M   +G++
Sbjct: 555 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 614

Query: 541 PGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHNNMQIGEYVSHH 600
           PG +HY+C++DLLGR G+L  AL +I +MPM+P   VW A L  C+IH  +++GEY +  
Sbjct: 615 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 674

Query: 601 LFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIVQVNGKSHVFFV 634
           + EL      S+  ++N+YA+ GRW  V  +R  MR   ++K PG S V+    +  FFV
Sbjct: 675 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 734

BLAST of CmUC01G018540 vs. ExPASy TrEMBL
Match: A0A5D3CMI9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002380 PE=4 SV=1)

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 584/649 (89.98%), Postives = 611/649 (94.14%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           M SLTP LNRFSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGK EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMI+GFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLA+MVFHGIQ NARSSVSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA T+ISLL SCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++GLKKD VVCNALIDMYAKCGSLNDAREVFYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS HLFELQP VA SFVEMANIYA VGRWD VAAMRK MRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELD 649
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQRI ELD
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRIIELD 649

BLAST of CmUC01G018540 vs. ExPASy TrEMBL
Match: A0A1S3B2E4 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485014 PE=4 SV=1)

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 584/649 (89.98%), Postives = 611/649 (94.14%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           M SLTP LNRFSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGK EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMI+GFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLA+MVFHGIQ NARSSVSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA T+ISLL SCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++GLKKD VVCNALIDMYAKCGSLNDAREVFYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS HLFELQP VA SFVEMANIYA VGRWD VAAMRK MRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELD 649
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQRI ELD
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRIIELD 649

BLAST of CmUC01G018540 vs. ExPASy TrEMBL
Match: A0A1S3B296 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485014 PE=4 SV=1)

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 584/651 (89.71%), Postives = 612/651 (94.01%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           M SLTP LNRFSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGK EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMI+GFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SVSNTWI+AYSKCGELQLA+MVFHGIQ NARSSVSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA T+ISLL SCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++GLKKD VVCNALIDMYAKCGSLNDAREVFYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS HLFELQP VA SFVEMANIYA VGRWD VAAMRK MRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELDME 651
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQRI ELD +
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRIIELDTD 651

BLAST of CmUC01G018540 vs. ExPASy TrEMBL
Match: A0A0A0KK94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501860 PE=4 SV=1)

HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 582/649 (89.68%), Postives = 613/649 (94.45%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           MS+LT  LN FSK ST+T WNS+IR AVNQGNA KAL LF Q+K N LQPNNFTFPFL+K
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIHTHVVKSP++SDI+VQTAMVDMYVKCGKV+DAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMIIGFS IGSLDRVF+LF GMRLVG RPD AT+IGLTRAV+SAKS RFLKAVHA+GI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDADTSVSNTWIAAYSKCGELQLA+MVFHGIQ  ARSSVSWNSLIACYA+FGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           V +YKGLLCDGFKPDAST+ISLLSSCQQPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGR DDALVLFNAMEETGEKPDIVTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGKTGALGLGHWI+NYAS++ LKKD VVCNALIDMYAKCGSLNDARE+FYSLPN
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S SGIEPNNITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPMKPDEG+WGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NM+IGEYVS +LFELQP VAVSFVEMANIYASVGRWD VAAMRKTMRSN+MRKSPGKS+V
Sbjct: 541 NMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELD 649
           QVNG SHVFFVEDRSHHDSLLIY  L NLAMQMKQKEFSS AQR  ELD
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRWVELD 649

BLAST of CmUC01G018540 vs. ExPASy TrEMBL
Match: A0A6J1BUQ5 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005926 PE=4 SV=1)

HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 545/651 (83.72%), Postives = 591/651 (90.78%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           MSSL P  NRFSK STVT WNS IRDAVN G+ +KALVLFRQMK N LQPNNFTFPF+AK
Sbjct: 1   MSSLPPHFNRFSKFSTVTWWNSNIRDAVNHGHPFKALVLFRQMKLNGLQPNNFTFPFIAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACAKLS+L N+QIIHTHVVKSP+HSDIFVQTAMVDMYVKC KVEDAYNLF+KMPVRDIAS
Sbjct: 61  ACAKLSNLCNTQIIHTHVVKSPFHSDIFVQTAMVDMYVKCCKVEDAYNLFEKMPVRDIAS 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAMIIGF+  GS DRVF LF GM LVGIRPDPAT+IGLTRAVLSAKS RFLKAVHA+GI
Sbjct: 121 WNAMIIGFAQFGSPDRVFHLFVGMGLVGIRPDPATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWIAAYSKCGELQ+AEMVF GIQ +ARSSVSWNSLI+CYA F +Y+DA
Sbjct: 181 ETGLDADVSVANTWIAAYSKCGELQVAEMVFKGIQKHARSSVSWNSLISCYAKFERYLDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VNTYKGL+CDGFKPDAST+ISLLSSC QPEAL+YGSLIHGHG QLGCDSDISL NTLISM
Sbjct: 241 VNTYKGLICDGFKPDASTIISLLSSCMQPEALVYGSLIHGHGVQLGCDSDISLTNTLISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YSRCGDI SA  LFDGMSIRTCVSWTAMISGYSEVGR D+ALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDIFSARTLFDGMSIRTCVSWTAMISGYSEVGRIDEALVLFNAMEEAGEKPDLVTV 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD-VVCNALIDMYAKCGSLNDAREVFYSLPN 420
           LSLISGCGK GAL LGHWIE Y+ ++GLK+D VV NALIDMY KCGS++DAR+VFY LPN
Sbjct: 361 LSLISGCGKAGALELGHWIERYSYLHGLKQDVVVSNALIDMYGKCGSMSDARDVFYGLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGREC 480
           +T+VSWTAMIAACALNGEFREALD+F+LMS SGI PN++TF+AVLQACSH GYLEKGREC
Sbjct: 421 RTIVSWTAMIAACALNGEFREALDIFHLMSESGIMPNHVTFVAVLQACSHEGYLEKGREC 480

Query: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHN 540
           FMMMTERYGINPGLDHYSCMIDLLGR+GKLIEALEVI+DMPM+PD G+WGALLGACKIH 
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMEPDVGIWGALLGACKIHR 540

Query: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIV 600
           NMQIGEYVS +LFELQP VAVSFVEMANIYASVGRWD VA MRK MRSNK+RKSPGKS V
Sbjct: 541 NMQIGEYVSRNLFELQPQVAVSFVEMANIYASVGRWDRVADMRKMMRSNKVRKSPGKSTV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAELDME 651
           QVNGKSHVF VEDR HHDSLLIYAVLENL +Q+K++E +S AQ   E DME
Sbjct: 601 QVNGKSHVFIVEDRGHHDSLLIYAVLENLTLQLKEEESTSHAQITVENDME 651

BLAST of CmUC01G018540 vs. TAIR 10
Match: AT4G19191.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 698.4 bits (1801), Expect = 5.6e-201
Identity = 340/637 (53.38%), Postives = 449/637 (70.49%), Query Frame = 0

Query: 1   MSSLTPCLNRFSKPSTVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAK 60
           MS +   L R S  S+V  WN  IR+AVN+ +  ++L+LFR+MK+   +PNNFTFPF+AK
Sbjct: 1   MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60

Query: 61  ACAKLSHLTNSQIIHTHVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120
           ACA+L+ +   +++H H++KSP+ SD+FV TA VDM+VKC  V+ A  +F++MP RD  +
Sbjct: 61  ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120

Query: 121 WNAMIIGFSHIGSLDRVFSLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGI 180
           WNAM+ GF   G  D+ FSLF  MRL  I PD  T++ L ++    KS + L+A+HA+GI
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180

Query: 181 ETGLDADTSVSNTWIAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDA 240
             G+D   +V+NTWI+ Y KCG+L  A++VF  I    R+ VSWNS+   Y+ FG+  DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240

Query: 241 VNTYKGLLCDGFKPDASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
              Y  +L + FKPD ST I+L +SCQ PE L  G LIH H   LG D DI  INT ISM
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300

Query: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTV 360
           YS+  D  SA +LFD M+ RTCVSWT MISGY+E G  D+AL LF+AM ++GEKPD+VT+
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360

Query: 361 LSLISGCGKTGALGLGHWIENYASVYGLKKD--VVCNALIDMYAKCGSLNDAREVFYSLP 420
           LSLISGCGK G+L  G WI+  A +YG K+D  ++CNALIDMY+KCGS+++AR++F + P
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420

Query: 421 NKTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRE 480
            KTVV+WT MIA  ALNG F EAL LF  M     +PN+ITFLAVLQAC+H G LEKG E
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480

Query: 481 CFMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIH 540
            F +M + Y I+PGLDHYSCM+DLLGR+GKL EALE+IR+M  KPD G+WGALL ACKIH
Sbjct: 481 YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540

Query: 541 NNMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSI 600
            N++I E  +  LF L+P +A  +VEMANIYA+ G WDG A +R  M+   ++K PG+S+
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESV 600

Query: 601 VQVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQMKQK 636
           +QVNGK+H F V +  H ++ +IY  L  L++  K K
Sbjct: 601 IQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637

BLAST of CmUC01G018540 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 424.1 bits (1089), Expect = 2.0e-118
Identity = 226/627 (36.04%), Postives = 346/627 (55.18%), Query Frame = 0

Query: 19  LWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIHTHV 78
           L+++ ++      +  KAL  F +M+ +D++P  + F +L K C   + L   + IH  +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161

Query: 79  VKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLDRVF 138
           VKS +  D+F  T + +MY KC +V +A  +FD+MP RD+ SWN ++ G+S  G      
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 139 SLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTWIAAY 198
            +   M    ++P   TI+ +  AV + +     K +H   + +G D+  ++S   +  Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281

Query: 199 SKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKPDAST 258
           +KCG L+ A  +F G  M  R+ VSWNS+I  Y       +A+  ++ +L +G KP   +
Sbjct: 282 AKCGSLETARQLFDG--MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 341

Query: 259 MISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMS 318
           ++  L +C     L  G  IH    +LG D ++S++N+LISMY +C ++ +A  +F  + 
Sbjct: 342 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 401

Query: 319 IRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHW 378
            RT VSW AMI G+++ GR  DAL  F+ M     KPD  T +S+I+   +        W
Sbjct: 402 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 461

Query: 379 IENYASVYGLKKDV-VCNALIDMYAKCGSLNDAREVFYSLPNKTVVSWTAMIAACALNGE 438
           I        L K+V V  AL+DMYAKCG++  AR +F  +  + V +W AMI     +G 
Sbjct: 462 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 521

Query: 439 FREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRECFMMMTERYGINPGLDHYS 498
            + AL+LF  M    I+PN +TFL+V+ ACSH G +E G +CF MM E Y I   +DHY 
Sbjct: 522 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 581

Query: 499 CMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHNNMQIGEYVSHHLFELQPL 558
            M+DLLGR G+L EA + I  MP+KP   V+GA+LGAC+IH N+   E  +  LFEL P 
Sbjct: 582 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 641

Query: 559 VAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIVQVNGKSHVFFVEDRSHHD 618
                V +ANIY +   W+ V  +R +M    +RK+PG S+V++  + H FF    +H D
Sbjct: 642 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 701

Query: 619 SLLIYAVLENLAMQMKQKEFSSDAQRI 645
           S  IYA LE L   +K+  +  D   +
Sbjct: 702 SKKIYAFLEKLICHIKEAGYVPDTNLV 726

BLAST of CmUC01G018540 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-110
Identity = 212/650 (32.62%), Postives = 359/650 (55.23%), Query Frame = 0

Query: 16  TVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIH 75
           T  ++NS IR   + G   +A++LF +M  + + P+ +TFPF   ACAK     N   IH
Sbjct: 98  TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 76  THVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLD 135
             +VK  Y  D+FVQ ++V  Y +CG+++ A  +FD+M  R++ SW +MI G++      
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 136 RVFSLFFGM-RLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTW 195
               LFF M R   + P+  T++ +  A    +     + V+A    +G++ +  + +  
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 196 IAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKP 255
           +  Y KC  + +A+ +F   +  A +    N++ + Y   G   +A+  +  ++  G +P
Sbjct: 278 VDMYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 337

Query: 256 DASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 315
           D  +M+S +SSC Q   +++G   HG+  + G +S  ++ N LI MY +C    +A  +F
Sbjct: 338 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 397

Query: 316 DGMSIRTCVSWTAMISGYSEVGR-------------------------------FDDALV 375
           D MS +T V+W ++++GY E G                                F++A+ 
Sbjct: 398 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 457

Query: 376 LFNAME-ETGEKPDIVTVLSLISGCGKTGALGLGHWIENYASVYGLKKDV-VCNALIDMY 435
           +F +M+ + G   D VT++S+ S CG  GAL L  WI  Y    G++ DV +   L+DM+
Sbjct: 458 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 517

Query: 436 AKCGSLNDAREVFYSLPNKTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFL 495
           ++CG    A  +F SL N+ V +WTA I A A+ G    A++LF  M   G++P+ + F+
Sbjct: 518 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 577

Query: 496 AVLQACSHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPM 555
             L ACSHGG +++G+E F  M + +G++P   HY CM+DLLGR G L EA+++I DMPM
Sbjct: 578 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 637

Query: 556 KPDEGVWGALLGACKIHNNMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAM 615
           +P++ +W +LL AC++  N+++  Y +  +  L P    S+V ++N+YAS GRW+ +A +
Sbjct: 638 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 697

Query: 616 RKTMRSNKMRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQ 632
           R +M+   +RK PG S +Q+ GK+H F   D SH +   I A+L+ ++ +
Sbjct: 698 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745

BLAST of CmUC01G018540 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-110
Identity = 212/650 (32.62%), Postives = 359/650 (55.23%), Query Frame = 0

Query: 16  TVTLWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIH 75
           T  ++NS IR   + G   +A++LF +M  + + P+ +TFPF   ACAK     N   IH
Sbjct: 98  TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 76  THVVKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLD 135
             +VK  Y  D+FVQ ++V  Y +CG+++ A  +FD+M  R++ SW +MI G++      
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 136 RVFSLFFGM-RLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTW 195
               LFF M R   + P+  T++ +  A    +     + V+A    +G++ +  + +  
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 196 IAAYSKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKP 255
           +  Y KC  + +A+ +F   +  A +    N++ + Y   G   +A+  +  ++  G +P
Sbjct: 278 VDMYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 337

Query: 256 DASTMISLLSSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 315
           D  +M+S +SSC Q   +++G   HG+  + G +S  ++ N LI MY +C    +A  +F
Sbjct: 338 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 397

Query: 316 DGMSIRTCVSWTAMISGYSEVGR-------------------------------FDDALV 375
           D MS +T V+W ++++GY E G                                F++A+ 
Sbjct: 398 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 457

Query: 376 LFNAME-ETGEKPDIVTVLSLISGCGKTGALGLGHWIENYASVYGLKKDV-VCNALIDMY 435
           +F +M+ + G   D VT++S+ S CG  GAL L  WI  Y    G++ DV +   L+DM+
Sbjct: 458 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 517

Query: 436 AKCGSLNDAREVFYSLPNKTVVSWTAMIAACALNGEFREALDLFYLMSGSGIEPNNITFL 495
           ++CG    A  +F SL N+ V +WTA I A A+ G    A++LF  M   G++P+ + F+
Sbjct: 518 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 577

Query: 496 AVLQACSHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIRDMPM 555
             L ACSHGG +++G+E F  M + +G++P   HY CM+DLLGR G L EA+++I DMPM
Sbjct: 578 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 637

Query: 556 KPDEGVWGALLGACKIHNNMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDGVAAM 615
           +P++ +W +LL AC++  N+++  Y +  +  L P    S+V ++N+YAS GRW+ +A +
Sbjct: 638 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 697

Query: 616 RKTMRSNKMRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYAVLENLAMQ 632
           R +M+   +RK PG S +Q+ GK+H F   D SH +   I A+L+ ++ +
Sbjct: 698 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745

BLAST of CmUC01G018540 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 394.0 bits (1011), Expect = 2.3e-109
Identity = 211/635 (33.23%), Postives = 339/635 (53.39%), Query Frame = 0

Query: 19  LWNSTIRDAVNQGNAYKALVLFRQMKQNDLQPNNFTFPFLAKACAKLSHLTNSQIIHTHV 78
           +WN+  R      +   AL L+  M    L PN++TFPF+ K+CAK       Q IH HV
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160

Query: 79  VKSPYHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIASWNAMIIGFSHIGSLDRVF 138
           +K     D++V T+++ MYV+ G++EDA+ +FDK P RD+ S+ A+I G++  G ++   
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220

Query: 139 SLFFGMRLVGIRPDPATIIGLTRAVLSAKSSRFLKAVHALGIETGLDADTSVSNTWIAAY 198
            LF                                                         
Sbjct: 221 KLF--------------------------------------------------------- 280

Query: 199 SKCGELQLAEMVFHGIQMNARSSVSWNSLIACYANFGKYVDAVNTYKGLLCDGFKPDAST 258
                           ++  +  VSWN++I+ YA  G Y +A+  +K ++    +PD ST
Sbjct: 281 ---------------DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 340

Query: 259 MISLLSSCQQPEALIYGSLIH----GHGFQLGCDSDISLINTLISMYSRCGDISSATILF 318
           M++++S+C Q  ++  G  +H     HGF     S++ ++N LI +YS+CG++ +A  LF
Sbjct: 341 MVTVVSACAQSGSIELGRQVHLWIDDHGF----GSNLKIVNALIDLYSKCGELETACGLF 400

Query: 319 DGMSIRTCVSWTAMISGYSEVGRFDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALG 378
           + +  +  +SW  +I GY+ +  + +AL+LF  M  +GE P+ VT+LS++  C   GA+ 
Sbjct: 401 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 460

Query: 379 LGHWIENYAS--VYGL-KKDVVCNALIDMYAKCGSLNDAREVFYSLPNKTVVSWTAMIAA 438
           +G WI  Y    + G+     +  +LIDMYAKCG +  A +VF S+ +K++ SW AMI  
Sbjct: 461 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 520

Query: 439 CALNGEFREALDLFYLMSGSGIEPNNITFLAVLQACSHGGYLEKGRECFMMMTERYGINP 498
            A++G    + DLF  M   GI+P++ITF+ +L ACSH G L+ GR  F  MT+ Y + P
Sbjct: 521 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 580

Query: 499 GLDHYSCMIDLLGRRGKLIEALEVIRDMPMKPDEGVWGALLGACKIHNNMQIGEYVSHHL 558
            L+HY CMIDLLG  G   EA E+I  M M+PD  +W +LL ACK+H N+++GE  + +L
Sbjct: 581 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 640

Query: 559 FELQPLVAVSFVEMANIYASVGRWDGVAAMRKTMRSNKMRKSPGKSIVQVNGKSHVFFVE 618
            +++P    S+V ++NIYAS GRW+ VA  R  +    M+K PG S ++++   H F + 
Sbjct: 641 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 659

Query: 619 DRSHHDSLLIYAVLENLAMQMKQKEFSSDAQRIAE 647
           D+ H  +  IY +LE + + +++  F  D   + +
Sbjct: 701 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038881350.10.0e+0092.94pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Benincasa ... [more]
XP_008440673.10.0e+0089.98PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial ... [more]
XP_008440672.10.0e+0089.71PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial ... [more]
KAA0036256.10.0e+0089.98pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12650... [more]
XP_004143574.10.0e+0089.68pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sa... [more]
Match NameE-valueIdentityDescription
P0C8Q27.9e-20053.38Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidop... [more]
Q3E6Q12.9e-11736.04Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9LUJ21.7e-10932.62Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Q9LN013.2e-10833.23Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9LFL56.6e-10633.38Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5D3CMI90.0e+0089.98Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B2E40.0e+0089.98pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 ... [more]
A0A1S3B2960.0e+0089.71pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 ... [more]
A0A0A0KK940.0e+0089.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501860 PE=4 SV=1[more]
A0A6J1BUQ50.0e+0083.72pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT4G19191.15.6e-20153.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.12.0e-11836.04Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22690.11.2e-11032.62CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
AT3G22690.21.2e-11032.62INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
AT1G08070.12.3e-10933.23Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 222..256
e-value: 2.9E-5
score: 21.9
coord: 120..152
e-value: 2.7E-4
score: 18.9
coord: 423..456
e-value: 1.6E-8
score: 32.2
coord: 496..519
e-value: 0.0023
score: 16.0
coord: 392..416
e-value: 0.0011
score: 17.0
coord: 90..118
e-value: 2.5E-4
score: 19.0
coord: 323..357
e-value: 9.0E-9
score: 33.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 420..468
e-value: 1.2E-9
score: 38.2
coord: 323..368
e-value: 6.5E-11
score: 42.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 495..520
e-value: 4.5E-4
score: 20.3
coord: 392..416
e-value: 0.0028
score: 17.8
coord: 120..148
e-value: 0.0023
score: 18.1
coord: 222..251
e-value: 0.0023
score: 18.1
coord: 295..317
e-value: 0.037
score: 14.3
coord: 91..117
e-value: 1.1E-4
score: 22.2
coord: 192..212
e-value: 0.14
score: 12.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 20..63
e-value: 0.0011
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 86..116
score: 8.933517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 16..50
score: 8.823904
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 11.936913
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 11.509422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 117..151
score: 10.150222
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 10.095415
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 389..636
e-value: 1.2E-40
score: 141.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 8..76
e-value: 1.8E-6
score: 29.4
coord: 77..168
e-value: 3.5E-18
score: 67.6
coord: 169..277
e-value: 2.9E-16
score: 61.3
coord: 278..375
e-value: 8.8E-22
score: 79.3
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 10..647
NoneNo IPR availablePANTHERPTHR24015:SF1993REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 10..647

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G018540.1CmUC01G018540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding