CmUC01G013900 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G013900
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	BHLH domain-containing protein
Location	CmU531Chr01: 27309807 .. 27310264 (-)
RNA-Seq Expression	CmUC01G013900
Synteny	CmUC01G013900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGCAGATCTCGTTCAAGGCAATCAAATGGTGTAAGAATCAGCGACGAACAAATCACTGATCTTGTTCACAAGTTGCAGCAGCTCTTGCCTGAGATTCGCCATCGCCACTCCGACAAGGTCTGTGTTAAGAATCAGGAAGTTTTTTTTTGTTAACTTCTTTCTTTTGAACTTTTGTGCTAATTTTTATTGATATAAGTTTTTGGATGGAGGAAAAGAGATTTTACGTAATTAATTACCAAAATGTGAGGAAAAAAAAAAAAAAAAAAAAGAAAAAAGTTGATTTATTGAAAGATGAATTGTAGGTTTCAGCAGCGAAGGTTTTGCAAGAGACATGCAATTACATTCGAAGTCTACATAGAGAAGTAGATGATTTAAGTGAGAGACTTTCGGAATTGTTGGCCACATCCGACACAGCCCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

mRNA sequence

ATGTCTGGCAGATCTCGTTCAAGGCAATCAAATGGTGTAAGAATCAGCGACGAACAAATCACTGATCTTGTTCACAAGTTGCAGCAGCTCTTGCCTGAGATTCGCCATCGCCACTCCGACAAGGTCTGTTTTTTGGATGGAGGAAAAGAGATTTTACCAGCGAAGGTTTTGCAAGAGACATGCAATTACATTCGAAGTCTACATAGAGAAGTAGATGATTTAAGTGAGAGACTTTCGGAATTGTTGGCCACATCCGACACAGCCCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

Coding sequence (CDS)

ATGTCTGGCAGATCTCGTTCAAGGCAATCAAATGGTGTAAGAATCAGCGACGAACAAATCACTGATCTTGTTCACAAGTTGCAGCAGCTCTTGCCTGAGATTCGCCATCGCCACTCCGACAAGGTCTGTTTTTTGGATGGAGGAAAAGAGATTTTACCAGCGAAGGTTTTGCAAGAGACATGCAATTACATTCGAAGTCTACATAGAGAAGTAGATGATTTAAGTGAGAGACTTTCGGAATTGTTGGCCACATCCGACACAGCCCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

Protein sequence

MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

Homology

[Close]

BLAST of CmUC01G013900 vs. NCBI nr
Match: XP_016899225.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 2.2e-34
Identity = 86/99 (86.87%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+GVRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. NCBI nr
Match: KAG6573012.1 (putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. NCBI nr
Match: XP_004152438.1 (transcription factor PRE3 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. NCBI nr
Match: XP_022955105.1 (transcription factor PRE3-like [Cucurbita moschata])

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. NCBI nr
Match: XP_023542851.1 (transcription factor PRE3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33
Identity = 84/99 (84.85%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+ +RISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSAIRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MSG-RSRSRQSNGV-RISDEQITDLVHKLQQLLPEIR-HRHSDKVCFLDGGKEILPAKVL 60
           MSG RSRSRQS+G  RIS++QI DL+ KLQQLLPE+R  R SDKV           A+VL
Sbjct: 1   MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVS---------AARVL 60

Query: 61  QETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           Q+TCNYIR+LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61  QDTCNYIRNLHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of CmUC01G013900 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24
Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 2  SGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQETC 61
          S RSRSRQS   RI+DEQI+DLV KLQ LLPE R R +D+V           ++VLQETC
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRV---------PSSRVLQETC 62

Query: 62 NYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL 98
          NYIRSLH+EVDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 NYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of CmUC01G013900 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24
Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 2  SGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQETC 61
          S RSRSRQS   RI+DEQI+DLV KLQ LLPE R R +D+V           ++VLQETC
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRV---------PSSRVLQETC 62

Query: 62 NYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL 98
          NYIRSLH+EVDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 NYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of CmUC01G013900 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-24
Identity = 67/101 (66.34%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1  MSGR--SRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQ 60
          MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+R R SDKV           +KVLQ
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVS---------ASKVLQ 60

Query: 61 ETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL 98
          ETCNYIR+LHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 ETCNYIRNLHREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CmUC01G013900 vs. ExPASy Swiss-Prot
Match: A2Z730 (Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23
Identity = 65/99 (65.66%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 1  MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
          MS RSRSR S+  RI+DEQI DLV KLQ LLPE R R +D+V           A+VLQET
Sbjct: 1  MSSRSRSRASSAARITDEQIGDLVSKLQALLPEARLRSNDRV---------PSARVLQET 60

Query: 61 CNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL 98
          C+YIRSLHREVDDLSERL+ELLA +D  TAQAA+IR LL
Sbjct: 61 CSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLL 90

[Close]

BLAST of CmUC01G013900 vs. ExPASy TrEMBL
Match: A0A1S4DU40 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34
Identity = 86/99 (86.87%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+GVRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. ExPASy TrEMBL
Match: A0A0A0LQQ1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-34
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. ExPASy TrEMBL
Match: A0A6J1GU92 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-34
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. ExPASy TrEMBL
Match: A0A6J1K5U5 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.5e-33
Identity = 84/99 (84.85%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 1   MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQET 60
           MSG SRSRQS+ VRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQET
Sbjct: 1   MSGISRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQET 60

Query: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CmUC01G013900 vs. ExPASy TrEMBL
Match: A0A5D3BJ22 (Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003000 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.7e-32
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 5   SRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQETCNYI 64
           SRSRQS+GVRISDEQITDLVHKLQQLLPEIR+RHSDKV           AKVLQETCNYI
Sbjct: 6   SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVS---------AAKVLQETCNYI 65

Query: 65  RSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           RSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 66  RSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91

[Close]

BLAST of CmUC01G013900 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 120.2 bits (300), Expect = 9.6e-28
Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MSG-RSRSRQSNGV-RISDEQITDLVHKLQQLLPEIR-HRHSDKVCFLDGGKEILPAKVL 60
           MSG RSRSRQS+G  RIS++QI DL+ KLQQLLPE+R  R SDKV           A+VL
Sbjct: 1   MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVS---------AARVL 60

Query: 61  QETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           Q+TCNYIR+LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61  QDTCNYIRNLHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of CmUC01G013900 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 67/101 (66.34%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1  MSGR--SRSRQSNGVRISDEQITDLVHKLQQLLPEIRHRHSDKVCFLDGGKEILPAKVLQ 60
          MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+R R SDKV           +KVLQ
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVS---------ASKVLQ 60

Query: 61 ETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL 98
          ETCNYIR+LHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 ETCNYIRNLHREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CmUC01G013900 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20
Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 2   SGRSRSRQSNGVRISDEQITDLVHKLQQLLPEI-RHRHSDKVCFLDGGKEILPAKVLQET 61
           S +SRSRQ+    I+DEQI DLV +L +LLPE+  +R S KV           ++VLQET
Sbjct: 3   SRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVS---------ASRVLQET 62

Query: 62  CNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 100
           C+YIR+L +EVDDLSERLS+LL ++D+AQAA+IRSLL Q
Sbjct: 63  CSYIRNLSKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of CmUC01G013900 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-19
Identity = 57/100 (57.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1  MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEI-RHRHSDKVCFLDGGKEILPAKVLQE 60
          MS R   + SN  RISD+Q+ DLV KL+Q LPEI   R SDKV           +KVLQE
Sbjct: 1  MSNRRSRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVS---------ASKVLQE 60

Query: 61 TCNYIRSLHREVDDLSERLSELL--ATSDTAQAAIIRSLL 98
          TCNYIR LHREVD+LS+RLS+LL     D+ +AA+IRSLL
Sbjct: 61 TCNYIRKLHREVDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91

[Close]

BLAST of CmUC01G013900 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-18
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 1  MSGRSRSRQSNGVRISDEQITDLVHKLQQLLPEI-RHRHSDKVCFLDGGKEILPAKVLQE 60
          MS R   + S+  RISD Q+ DLV KL+Q+LPEI + R SDK            +KVLQE
Sbjct: 1  MSNRRSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKAS---------ASKVLQE 60

Query: 61 TCNYIRSLHREVDDLSERLSELLAT--SDTAQAAIIRSLL 98
          TCNYIR+L+REVD+LSERLS+LL +   D+ +AA+IRSLL
Sbjct: 61 TCNYIRNLNREVDNLSERLSQLLESVDEDSPEAAVIRSLL 91

The following BLAST results are available for this feature:

BLAST of CmUC01G013900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899225.1	2.2e-34	86.87	PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcr...	[more]
KAG6573012.1	1.1e-33	85.86	putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma s...	[more]
XP_004152438.1	1.1e-33	85.86	transcription factor PRE3 [Cucumis sativus]	[more]
XP_022955105.1	1.1e-33	85.86	transcription factor PRE3-like [Cucurbita moschata]	[more]
XP_023542851.1	1.4e-33	84.85	transcription factor PRE3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC01G013900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	1.4e-26	71.57	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
B8APB5	1.7e-24	69.39	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	1.7e-24	69.39	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
Q8GW32	2.8e-24	66.34	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
A2Z730	2.4e-23	65.66	Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV...	[more]

BLAST of CmUC01G013900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DU40	1.1e-34	86.87	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1	[more]
A0A0A0LQQ1	5.3e-34	85.86	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 S...	[more]
A0A6J1GU92	5.3e-34	85.86	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=...	[more]
A0A6J1K5U5	4.5e-33	84.85	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 ...	[more]
A0A5D3BJ22	1.7e-32	86.32	Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CmUC01G013900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	9.6e-28	71.57	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	2.0e-25	66.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	4.3e-20	56.57	BANQUO 3	[more]
AT3G28857.1	1.3e-19	57.00	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G39860.1	1.4e-18	55.00	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..91
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 2..97
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 17..95 e-value: 1.2E-6 score: 30.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 18..85
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 2..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G013900.1	CmUC01G013900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity