CmUC01G013200 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCATTACTACAGTTGGTTAACAGTGGGTGGAGCGCTGATAATGGTACGTTCAAGCCTAGCTATCTACAACAACTCCAACGTCTGCTGCATGAGAAAGTTCCTAATTGTGGCATAGGGGTAGCCACAATAGAGTGTAGAGTTAGATTTTTAAAGTGATAGTATACAGCGATTGCTAAGATGTTGAGTAATGCATGCAACGGATTTAGTTGGAACGAGGACTTTAAGTGTGTAGACGCTGAGCAGGACATGTTTAGTCTATAGGTCTGGGTAAGACCACTTTATAATATACTATGACAATTGATATAATTTTTACTAACATATTATATCCATTTGTAGTCACATCCCAATGTGAAAGGTATGAGGCACAAACCACTCCCACACTATGATGATCTTTCCATCGTGTTTGGAAGGGATAAGGCTATTGGTGATAGCTGTCAAACCCCTCTTGATCAAGCATATGAGACAAATGACCATGTAGGGGATGTTAGGTTGGGATCACAGGATAATTAG ATGGAGTCATTACTACAGTTGGTTAACAGTGGGTGGAGCGCTGATAATGGTACGTTCAAGCCTAGCTATCTACAACAACTCCAACGTCTGCTGCATGAGAAAGTTCCTAATTGTGGCATAGGGTCACATCCCAATGTGAAAGGTATGAGGCACAAACCACTCCCACACTATGATGATCTTTCCATCGTGTTTGGAAGGGATAAGGCTATTGGTGATAGCTGTCAAACCCCTCTTGATCAAGCATATGAGACAAATGACCATGTAGGGGATGTTAGGTTGGGATCACAGGATAATTAG ATGGAGTCATTACTACAGTTGGTTAACAGTGGGTGGAGCGCTGATAATGGTACGTTCAAGCCTAGCTATCTACAACAACTCCAACGTCTGCTGCATGAGAAAGTTCCTAATTGTGGCATAGGGTCACATCCCAATGTGAAAGGTATGAGGCACAAACCACTCCCACACTATGATGATCTTTCCATCGTGTTTGGAAGGGATAAGGCTATTGGTGATAGCTGTCAAACCCCTCTTGATCAAGCATATGAGACAAATGACCATGTAGGGGATGTTAGGTTGGGATCACAGGATAATTAG MESLLQLVNSGWSADNGTFKPSYLQQLQRLLHEKVPNCGIGSHPNVKGMRHKPLPHYDDLSIVFGRDKAIGDSCQTPLDQAYETNDHVGDVRLGSQDN Homology
BLAST of CmUC01G013200 vs. NCBI nr
Match: XP_038889264.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22 Identity = 62/148 (41.89%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of CmUC01G013200 vs. NCBI nr
Match: XP_038895852.1 (uncharacterized protein LOC120084021 [Benincasa hispida]) HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19 Identity = 56/135 (41.48%), Postives = 70/135 (51.85%), Query Frame = 0
BLAST of CmUC01G013200 vs. NCBI nr
Match: XP_038902479.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 99.0 bits (245), Expect = 2.4e-17 Identity = 53/146 (36.30%), Postives = 69/146 (47.26%), Query Frame = 0
BLAST of CmUC01G013200 vs. NCBI nr
Match: XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 95.1 bits (235), Expect = 3.5e-16 Identity = 52/140 (37.14%), Postives = 68/140 (48.57%), Query Frame = 0
BLAST of CmUC01G013200 vs. NCBI nr
Match: XP_020994188.1 (uncharacterized protein LOC110279295 isoform X2 [Arachis duranensis]) HSP 1 Score: 93.2 bits (230), Expect = 1.3e-15 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of CmUC01G013200 vs. ExPASy TrEMBL
Match: A0A6P5NGC3 (uncharacterized protein LOC110279295 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC110279295 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.5e-16 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of CmUC01G013200 vs. ExPASy TrEMBL
Match: A0A5A7V4P8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001290 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.3e-15 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of CmUC01G013200 vs. ExPASy TrEMBL
Match: A0A5A7T5F8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00400 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of CmUC01G013200 vs. ExPASy TrEMBL
Match: A0A5D3DTF3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00110 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of CmUC01G013200 vs. ExPASy TrEMBL
Match: A0A5D3BCA9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00630 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.1e-14 Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|