CmUC01G009700 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G009700
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionGlycine cleavage system H protein
LocationCmU531Chr01: 12711090 .. 12713986 (+)
RNA-Seq ExpressionCmUC01G009700
SyntenyCmUC01G009700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTATGATCCCACATCCAAAAAATGAAATCAAACTGACCCAAAATACGTAAAATGCAAAGTATAAAACCCAAAAAACAGATGTAATATATATATATATTGTATACGAGCATCCGAGCATCCCCACCAACCCGTTCTCTTAGAGCCGACGGCAAGCCAAAGCATTAGCAACAAAACAAGCTTCTGTTAAGAAAAGGGTTTTTCCAGAGCGCTCTAAGTTTCATCAATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGGATCTCAATTCCCCATAGAGGGTTTGCTTCTGGTGAGCCGAACCCACATTTTTTAATGTCCTGATTTTCCTCATCCGTTCTGGTGAGCCGAAAACAAGTGAAACTGATCGATCTGCTTTTGACATTGAAAGATCTCAGTTTCCCATGATGGGGTTTGTTACTCTTTGTTGTTTGTTTGATCAATGGCAGACCCTTTTCAAGAACTGCAGGATTTGTCTCGTTTTTTTTTTTTTTTTTTTGTATGGCTGTCACGTCTCATTGTCTTGTGAATGATTGAGGTGATTATATAATGAATATTTGTGGGTAGATCTTAGGCAGATGAATAAATTTTTTTTTTTTAAATAAGAAAAATAAAGTTTTCGTTTACTATGTTTTCTGTTATGTGTCTTCCCCTTCTCCCCCATTGATTATTTAATGAATATTTGCCATTCTTCTTTATGGTTTTTTGAAATTTGAATCGGTTGTTGGGTTCACTGATGTTATCTATTCATGTGCATTTGTTGAGTATACACATCTTTTCACCTTCCATTTGAATTATGATTTGATGAATCTCAAATATTAGATATTCTATTCTATTCTACTTGCCTTTTTTCTCTCCTTCATTTTATTTGTTTATGTGTTTTTCTTTCAATCTTGTCATTTGAATTAACATCTGTGCCTTGGTGAACTTTCTAGCTGCTGATATTGTTAACTATGTAGTTTTCTAGTTTTAATATCAATCTTCGTCCCAACAGTATGCCACTTTCCCAACAGTAACTTTCTGTTCGTCTACCAACATGTGACAGTAATTTTCGTTTCCAGAAGTTTGCACTTCATATTCTGATATTTGCATCTACTAACCAATATTAATCAAAGGGATGGGATGTAGAAGTATAAATCCATATGAAGCAAAAGAAACATATGTACATTTGTACAAGACACACTATATAGCATAGTCTTATAAGAAGGCAAGCATTTTTTTTTTTTTATTTAAAATGTGTGGGTAAGAGAATCAAACTTCTAACGTCGAGTTTGATAGTACAAGTTTTACGCCATTGAGGTATGCTACTTTTTGGCATAAAGGCAATCATGATACCGTCTTACAAACGAAGAAACTTGAGAATAAAATGTTCCATACAGTTACATGATTGCAAAAGGAAGTCCAATATTTCTAATCAAAATGCATTAATTTCTCTTTATCAAAAAGAAACTATGGAATATCTAACCTTCAATTTTATGTATAAAACTACATGAGTCAAAGAAATAACTTGTACATCAAAATGTGCAGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGAATAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTAGGTGATGTTGTCTATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATAAACTCTCCTGTGTCAGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGTTCCCCTGGTCTGGTAGGTTCCTTGATCTAATATTCTTGCTCTGAATAATGACCTGACAGTTGCTCTGGTGAGATTTAAGCTTATTTTCTTTCTTCCTTCCACTTTTGGATACTTTCAACAAATGACTTGAGTCTTAGTTTCATTACTTGACATGTCTATGTTGCCAAATACCACAACCCCTCCCCCCTTCAAATTTGATAGAAAGATCTGGTTAAAGTAAATTTGTAAGTGTAAGGGATACATATACTACACCTTTTTTTTCTTTGCAAAAGATACCAACTCTTCTTGAGTAGCATGAAAATGTTGCCATTGGAGTTTGCATATTGCATATTCTAAATTCTTAGGATTTTACAGCCTTCTTTGACTATATCCAGGAGACAACCTGCCAATACCTTTGGATGTTTTCTTGACAATTACCATTTCTTTTACTATCCTCCCCATTGCGTCTATTGATAACTTTCTAGTCATTTTGTAACTTGGTGATTGTAAAATACACACATACACAGCAACATTCTGGATCACTTTTGTAATTATCCTTTGTTCCTTATTCTTTGTCCTTTCCTGCATCTTAATGAAAGTTAAGGGAAAGTTTCTTTGTTTATACAAATCTAACTAGATAGCACTTTTTTAGTTTTCTTTGAATATGAGTATATGAGTAGCCTTTTGTCATCAAATGAAAGCTAAAAAGAACCATCACTTAGTTTTCTTTCTCCAAAGCAGGTTTAAGGTTGCTTTTGATCCATTTGTGTTAATGTAGGTGAACTCAAGTCCATATGAAAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAGTACTCCAAGTTCTGTGAAGAAGAAGATTCAAAGCACTGAGAGTTCATAGAGATGTTTGAAGAAGTCAGCAGCTGGGAGAACGCTGCATCAGATCAGTTGGTTCTCTGGGTTGGACAGAGAGACTGCACATTTCTTCCTTCCATTTTCTTTTTCTTCTGTTTTCTGGATTTTCTTTCCTTGTAAGACTCGCTAAATTGGTGGAAAGTTTCCCACTCAGATGAATAATATAATCTCTTTGAAGCTTCAACTAATGGTGTAATAATG

mRNA sequence

CTTATGATCCCACATCCAAAAAATGAAATCAAACTGACCCAAAATACGTAAAATGCAAAGTATAAAACCCAAAAAACAGATGTAATATATATATATATTGTATACGAGCATCCGAGCATCCCCACCAACCCGTTCTCTTAGAGCCGACGGCAAGCCAAAGCATTAGCAACAAAACAAGCTTCTGTTAAGAAAAGGGTTTTTCCAGAGCGCTCTAAGTTTCATCAATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGGATCTCAATTCCCCATAGAGGGTTTGCTTCTGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGAATAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTAGGTGATGTTGTCTATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATAAACTCTCCTGTGTCAGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGTTCCCCTGGTCTGGTGAACTCAAGTCCATATGAAAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAGTACTCCAAGTTCTGTGAAGAAGAAGATTCAAAGCACTGAGAGTTCATAGAGATGTTTGAAGAAGTCAGCAGCTGGGAGAACGCTGCATCAGATCAGTTGGTTCTCTGGGTTGGACAGAGAGACTGCACATTTCTTCCTTCCATTTTCTTTTTCTTCTGTTTTCTGGATTTTCTTTCCTTGTAAGACTCGCTAAATTGGTGGAAAGTTTCCCACTCAGATGAATAATATAATCTCTTTGAAGCTTCAACTAATGGTGTAATAATG

Coding sequence (CDS)

ATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGGATCTCAATTCCCCATAGAGGGTTTGCTTCTGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGAATAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTAGGTGATGTTGTCTATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATAAACTCTCCTGTGTCAGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGTTCCCCTGGTCTGGTGAACTCAAGTCCATATGAAAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAGTACTCCAAGTTCTGTGAAGAAGAAGATTCAAAGCACTGA

Protein sequence

MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Homology
BLAST of CmUC01G009700 vs. NCBI nr
Match: XP_038893845.1 (glycine cleavage system H protein 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP+RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. NCBI nr
Match: XP_008459025.1 (PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo] >KAA0043183.1 glycine cleavage system H protein 2 [Cucumis melo var. makuwa] >TYK12282.1 glycine cleavage system H protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. NCBI nr
Match: XP_022142648.1 (glycine cleavage system H protein 2, mitochondrial [Momordica charantia])

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 148/155 (95.48%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+PHRG ASV+KDLKYATSHEWVKVEGN+ATVGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVPHRGSASVLKDLKYATSHEWVKVEGNQATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVS+SGELKNLMDS+QYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSESGELKNLMDSDQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. NCBI nr
Match: XP_004145438.1 (glycine cleavage system H protein 2, mitochondrial [Cucumis sativus] >KGN66866.1 hypothetical protein Csa_007471 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQ HLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELK LMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. NCBI nr
Match: XP_023001624.1 (glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_023001626.1 glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_023001627.1 glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_023001628.1 glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASR ASYLRISIPHRGFASVVKDLKYATSHEWVKVEG+KAT+GITDHAQDHLG
Sbjct: 1   MASRLVWASRVASYLRISIPHRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDS ELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSDELKNLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. ExPASy Swiss-Prot
Match: O82179 (Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH2 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.7e-66
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVV-KDLKYATSHEWVKVEGNKATVGITDHAQDHL 60
           MA RL WASR AS+LRIS+  RGF+SVV KDLKYA SHEWVK++GNKAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           E GWIIKVE+SD+GE + LMDS++YSKFCEEED+KH
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

BLAST of CmUC01G009700 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.0e-50
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 0

Query: 6   VWASRAASYLRISI---PH-----RGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQD 65
           +WAS  A+ LR+S    PH     R F+SV+  LKYA SHEWVK EG+ AT+GITDHAQD
Sbjct: 5   IWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQD 64

Query: 66  HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSS 125
           HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PGL+NSS
Sbjct: 65  HLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSS 124

Query: 126 PYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           PYE+GW+IKV+ S+  EL +LM +++Y+KFCEEEDS H
Sbjct: 125 PYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

BLAST of CmUC01G009700 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-49
Identity = 101/163 (61.96%), Postives = 129/163 (79.14%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISI---PH-----RGFASVVKDLKYATSHEWVKVEGNKATVGIT 60
           MA R+ WAS  A+ LR+S    PH     R F+SV+  LKYA SHEWVK EG+ AT+GIT
Sbjct: 1   MALRM-WASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGIT 60

Query: 61  DHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPG 120
           DHAQDHLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PG
Sbjct: 61  DHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPG 120

Query: 121 LVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           L+NSSPYE+GW+IKV+ S+  EL +LM +++Y+KFCEEED+ H
Sbjct: 121 LINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

BLAST of CmUC01G009700 vs. ExPASy Swiss-Prot
Match: Q9LQL0 (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-47
Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRIS--------IP----HRGFASVVKDLKYATSHEWVKVEGNKAT 60
           MA R+ WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG+ AT
Sbjct: 1   MALRM-WASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  VGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELS 120
           +GITDHAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 SSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            SPGL+NSSPYE+GW+IKV+ S   EL+ LM  ++Y+KFCEEED+ H
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

BLAST of CmUC01G009700 vs. ExPASy Swiss-Prot
Match: P25855 (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 98/166 (59.04%), Postives = 128/166 (77.11%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIP-----------HRGFASVVKDLKYATSHEWVKVEGNKATV 60
           MA R+ WAS  A+ L++S              R F++V++ LKYA SHEWVK EG+ AT+
Sbjct: 1   MALRM-WASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSS 120
           GIT HAQDHLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ 
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           SPGL+NSSPYE+GW+IKV+ S   EL++LM  ++Y+KFCEEED+ H
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

BLAST of CmUC01G009700 vs. ExPASy TrEMBL
Match: A0A5D3CLV3 (Glycine cleavage system H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00460 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. ExPASy TrEMBL
Match: A0A1S3C983 (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103498256 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. ExPASy TrEMBL
Match: A0A6J1CNS6 (Glycine cleavage system H protein OS=Momordica charantia OX=3673 GN=LOC111012706 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.1e-77
Identity = 148/155 (95.48%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+PHRG ASV+KDLKYATSHEWVKVEGN+ATVGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVPHRGSASVLKDLKYATSHEWVKVEGNQATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVS+SGELKNLMDS+QYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSESGELKNLMDSDQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. ExPASy TrEMBL
Match: A0A6J1KN94 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111495697 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.0e-77
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASR ASYLRISIPHRGFASVVKDLKYATSHEWVKVEG+KAT+GITDHAQDHLG
Sbjct: 1   MASRLVWASRVASYLRISIPHRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDS ELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSDELKNLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. ExPASy TrEMBL
Match: A0A0A0M3S2 (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_1G701910 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.0e-77
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQ HLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELK LMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH 155

BLAST of CmUC01G009700 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 251.9 bits (642), Expect = 3.3e-67
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIPHRGFASVV-KDLKYATSHEWVKVEGNKATVGITDHAQDHL 60
           MA RL WASR AS+LRIS+  RGF+SVV KDLKYA SHEWVK++GNKAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           E GWIIKVE+SD+GE + LMDS++YSKFCEEED+KH
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

BLAST of CmUC01G009700 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-48
Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRIS--------IP----HRGFASVVKDLKYATSHEWVKVEGNKAT 60
           MA R+ WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG+ AT
Sbjct: 1   MALRM-WASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  VGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELS 120
           +GITDHAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 SSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            SPGL+NSSPYE+GW+IKV+ S   EL+ LM  ++Y+KFCEEED+ H
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

BLAST of CmUC01G009700 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 187.6 bits (475), Expect = 7.7e-48
Identity = 98/166 (59.04%), Postives = 128/166 (77.11%), Query Frame = 0

Query: 1   MASRLVWASRAASYLRISIP-----------HRGFASVVKDLKYATSHEWVKVEGNKATV 60
           MA R+ WAS  A+ L++S              R F++V++ LKYA SHEWVK EG+ AT+
Sbjct: 1   MALRM-WASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSS 120
           GIT HAQDHLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ 
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           SPGL+NSSPYE+GW+IKV+ S   EL++LM  ++Y+KFCEEED+ H
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893845.12.3e-7898.71glycine cleavage system H protein 2, mitochondrial [Benincasa hispida][more]
XP_008459025.15.1e-7898.71PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo] >KA... [more]
XP_022142648.11.3e-7695.48glycine cleavage system H protein 2, mitochondrial [Momordica charantia][more]
XP_004145438.11.6e-7697.42glycine cleavage system H protein 2, mitochondrial [Cucumis sativus] >KGN66866.1... [more]
XP_023001624.11.6e-7695.48glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita ma... [more]
Match NameE-valueIdentityDescription
O821794.7e-6680.13Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P493598.0e-5062.66Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN... [more]
Q397323.0e-4961.96Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN... [more]
Q9LQL03.7e-4759.28Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P258551.1e-4659.04Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
Match NameE-valueIdentityDescription
A0A5D3CLV32.5e-7898.71Glycine cleavage system H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C9832.5e-7898.71Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103498256 PE=3 S... [more]
A0A6J1CNS66.1e-7795.48Glycine cleavage system H protein OS=Momordica charantia OX=3673 GN=LOC111012706... [more]
A0A6J1KN948.0e-7795.48Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111495697 PE... [more]
A0A0A0M3S28.0e-7797.42Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_1G701910 PE=... [more]
Match NameE-valueIdentityDescription
AT2G35120.13.3e-6780.13Single hybrid motif superfamily protein [more]
AT1G32470.12.6e-4859.28Single hybrid motif superfamily protein [more]
AT2G35370.17.7e-4859.04glycine decarboxylase complex H [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017453Glycine cleavage system H-protein, subgroupTIGRFAMTIGR00527TIGR00527coord: 28..152
e-value: 4.3E-52
score: 173.5
NoneNo IPR availableGENE3D2.40.50.100coord: 20..151
e-value: 2.6E-59
score: 200.5
NoneNo IPR availablePANTHERPTHR11715:SF31GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 3..153
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 31..150
e-value: 6.1E-50
score: 168.2
IPR033753Glycine cleavage system H-protein/SimiateCDDcd06848GCS_Hcoord: 33..127
e-value: 1.42321E-51
score: 157.695
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 3..153
IPR002930Glycine cleavage system H-proteinHAMAPMF_00272GcvHcoord: 28..149
score: 39.780178
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 71..100
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 46..128
score: 30.310823
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 27..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G009700.1CmUC01G009700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019464 glycine decarboxylation via glycine cleavage system
biological_process GO:0009249 protein lipoylation
cellular_component GO:0005960 glycine cleavage complex
cellular_component GO:0005739 mitochondrion