Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGGAGCTTGCGCTCTCATACTCCTTGGGCAGCACATTGCAACCTACCAAGCAGATGCTAAAAATTTTTTTGTAGACGACGGAGGCTTCCCTATTATCAACAACGTATTGAGTGACCCGAGTACAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTCGATCCACCTTCCAGCGTGGGGATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCAAGAACTTCGGACAATCCACCACCTCCTCCACCGCACGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCGGAATGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAGCCCACCTCCCCCACCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTCGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCGCCGCCTCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGGTTAAATTTGGGATGTATCCTAGAAATAACCCTATTCCACCATCTGCTCCAAGCGGACGAGTACCATCATGA
mRNA sequence
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGGAGCTTGCGCTCTCATACTCCTTGGGCAGCACATTGCAACCTACCAAGCAGATGCTAAAAATTTTTTTGTAGACGACGGAGGCTTCCCTATTATCAACAACGTATTGAGTGACCCGAGTACAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTCGATCCACCTTCCAGCGTGGGGATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCAAGAACTTCGGACAATCCACCACCTCCTCCACCGCACGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCGGAATGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAGCCCACCTCCCCCACCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTCGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCGCCGCCTCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGGTTAAATTTGGGATGTATCCTAGAAATAACCCTATTCCACCATCTGCTCCAAGCGGACGAGTACCATCATGA
Coding sequence (CDS)
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGGAGCTTGCGCTCTCATACTCCTTGGGCAGCACATTGCAACCTACCAAGCAGATGCTAAAAATTTTTTTGTAGACGACGGAGGCTTCCCTATTATCAACAACGTATTGAGTGACCCGAGTACAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTCGATCCACCTTCCAGCGTGGGGATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCAAGAACTTCGGACAATCCACCACCTCCTCCACCGCACGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCGGAATGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAGCCCACCTCCCCCACCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTCGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCGCCGCCTCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGGTTAAATTTGGGATGTATCCTAGAAATAACCCTATTCCACCATCTGCTCCAAGCGGACGAGTACCATCATGA
Protein sequence
MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGRVPS
Homology
BLAST of CmUC01G009190 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 258.1 bits (658), Expect = 7.1e-65
Identity = 136/193 (70.47%), Postives = 147/193 (76.17%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
MVSIS NVFFGACA I LG H YQ DAKN FV + G I N LSD + KHPKRHI
Sbjct: 1 MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINF 120
FS GK KR+PD PP ++GILSKEER PSG S TSDN PPPPPHV S ILHK+S INF
Sbjct: 61 FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDN-PPPPPHVISIILHKESRINF 120
Query: 121 GMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSS 180
+L KG RIPPSGPSQRTS+SPPPPPHA SVILHK+ GINFGILPK + IPPSGPS R S
Sbjct: 121 RVLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKRFS 180
Query: 181 DYPPPPPHAPFVI 194
+YP PP HAP VI
Sbjct: 181 NYPSPPTHAPSVI 192
BLAST of CmUC01G009190 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 198.4 bits (503), Expect = 6.7e-47
Identity = 114/196 (58.16%), Postives = 134/196 (68.37%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
MVS+ + N+FF ACALI LG H Y +AK FV D + NVL HPK+
Sbjct: 1 MVSVGT-NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINF 120
FS KPK++PD PP S+GILSK RT PSG S TS+N PP PHV+ ILHK+S +NF
Sbjct: 61 FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN--PPSPHVAPIILHKESMVNF 120
Query: 121 GMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSS 180
G+LPKG RIPPSGPS+RTSD PPP + S+ KES I +GILPKGVRIPPSGPS R+S
Sbjct: 121 GILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNS 180
Query: 181 DYPPPPP---HAPFVI 194
DY PPPP HAP +I
Sbjct: 181 DYYPPPPMHLHAPSII 190
BLAST of CmUC01G009190 vs. NCBI nr
Match:
KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 194.1 bits (492), Expect = 1.3e-45
Identity = 107/171 (62.57%), Postives = 120/171 (70.18%), Query Frame = 0
Query: 63 TGKPKRVPDFDPP----SSV----------GILSKEERTTPSGPSPRTSDNPPPPPPHVS 122
+G +R D+ PP SSV G+L K PSGPS RTS+ PPPPP H S
Sbjct: 134 SGPSQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHAS 193
Query: 123 STILHKQSSINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGV 182
S IL+ QS INFGMLPKG IPPSGPSQRTSD PPPPPHA S IL+ +S INFG+LPKGV
Sbjct: 194 SVILNTQSKINFGMLPKGVPIPPSGPSQRTSDYPPPPPHASSFILNTQSKINFGMLPKGV 253
Query: 183 RIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGR 220
IPPSGPS R+SDYPPPPPHA VIL +SK+ FGM P+ PIPPS PS R
Sbjct: 254 PIPPSGPSQRTSDYPPPPPHASSVILNTQSKINFGMLPKGVPIPPSGPSQR 304
BLAST of CmUC01G009190 vs. NCBI nr
Match:
KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 183.3 bits (464), Expect = 2.2e-42
Identity = 105/193 (54.40%), Postives = 125/193 (64.77%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
M+SISS N+ F CA++LLG H YQ + +N F + N L S HPK++I
Sbjct: 1 MMSISS-NMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINF 120
FS K K P+FD GI SK+ R PSGPS R+SD+PP P S IL K+S INF
Sbjct: 61 FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP-----SMILPKESRINF 120
Query: 121 GMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSS 180
G+LPKG RIPPSGPSQR SDSP P PS LHK S + FG+LPKG IPPSGPS R+S
Sbjct: 121 GILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTS 180
Query: 181 DYPPPPPHAPFVI 194
D PPPPPH+P +I
Sbjct: 181 DNPPPPPHSPSLI 183
BLAST of CmUC01G009190 vs. NCBI nr
Match:
XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])
HSP 1 Score: 181.8 bits (460), Expect = 6.5e-42
Identity = 110/197 (55.84%), Postives = 125/197 (63.45%), Query Frame = 0
Query: 26 YQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSS---VGILS 85
Y+ DAKN D I L+D ++PK S+ +R PS G+L
Sbjct: 186 YETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGMLP 245
Query: 86 KEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINFGMLPKGERIPPSGPSQRTSDSP 145
K PS PS RTSD PPPPP SS IL+K S IN GMLP+G IPPSGPSQRTSD P
Sbjct: 246 KGVPIPPSRPSQRTSDY-PPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 305
Query: 146 PPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKF 205
PPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A VIL K+SK+
Sbjct: 306 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 365
Query: 206 GMYPRNNPIPPSAPSGR 220
GM PR PIPP S R
Sbjct: 366 GMLPRGVPIPPPGLSQR 381
BLAST of CmUC01G009190 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47
Identity = 114/196 (58.16%), Postives = 134/196 (68.37%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
MVS+ + N+FF ACALI LG H Y +AK FV D + NVL HPK+
Sbjct: 1 MVSVGT-NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINF 120
FS KPK++PD PP S+GILSK RT PSG S TS+N PP PHV+ ILHK+S +NF
Sbjct: 61 FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN--PPSPHVAPIILHKESMVNF 120
Query: 121 GMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSS 180
G+LPKG RIPPSGPS+RTSD PPP + S+ KES I +GILPKGVRIPPSGPS R+S
Sbjct: 121 GILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNS 180
Query: 181 DYPPPPP---HAPFVI 194
DY PPPP HAP +I
Sbjct: 181 DYYPPPPMHLHAPSII 190
BLAST of CmUC01G009190 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 105/193 (54.40%), Postives = 125/193 (64.77%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
M+SISS N+ F CA++LLG H YQ + +N F + N L S HPK++I
Sbjct: 1 MMSISS-NMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINF 120
FS K K P+FD GI SK+ R PSGPS R+SD+PP P S IL K+S INF
Sbjct: 61 FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP-----SMILPKESRINF 120
Query: 121 GMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSS 180
G+LPKG RIPPSGPSQR SDSP P PS LHK S + FG+LPKG IPPSGPS R+S
Sbjct: 121 GILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTS 180
Query: 181 DYPPPPPHAPFVI 194
D PPPPPH+P +I
Sbjct: 181 DNPPPPPHSPSLI 183
BLAST of CmUC01G009190 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 3.1e-42
Identity = 110/197 (55.84%), Postives = 125/197 (63.45%), Query Frame = 0
Query: 26 YQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSS---VGILS 85
Y+ DAKN D I L+D ++PK S+ +R PS G+L
Sbjct: 186 YETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGMLP 245
Query: 86 KEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSSINFGMLPKGERIPPSGPSQRTSDSP 145
K PS PS RTSD PPPPP SS IL+K S IN GMLP+G IPPSGPSQRTSD P
Sbjct: 246 KGVPIPPSRPSQRTSDY-PPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 305
Query: 146 PPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKF 205
PPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A VIL K+SK+
Sbjct: 306 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 365
Query: 206 GMYPRNNPIPPSAPSGR 220
GM PR PIPP S R
Sbjct: 366 GMLPRGVPIPPPGLSQR 381
BLAST of CmUC01G009190 vs. ExPASy TrEMBL
Match:
A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 2.0e-33
Identity = 103/233 (44.21%), Postives = 123/233 (52.79%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
M+S SS NV FG CALILLG H TY DA++F V G +I N L+D +HPKRHIR
Sbjct: 8 MMSTSS-NVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIR 67
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPS---------------------GPSPRTSDN 120
FS KPKRVPD PP S+GIL+K+ T PS P P+ +
Sbjct: 68 FSWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPD 127
Query: 121 PPPP------------PPHVS----STILHKQSSINF-----------------GMLPKG 180
PP PP + S H ++ I F G+L K
Sbjct: 128 LAPPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKD 187
BLAST of CmUC01G009190 vs. ExPASy TrEMBL
Match:
A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 6.5e-32
Identity = 102/233 (43.78%), Postives = 120/233 (51.50%), Query Frame = 0
Query: 1 MVSISSCNVFFGACALILLGQHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIR 60
M+S SS NV FGACALILLG H TY DA+ F V G +I N L+D +HPKRHIR
Sbjct: 1 MMSTSS-NVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIR 60
Query: 61 FSTGKPKRVPDFDPPSSVGILSKEERTTPS---------------------GPSPRTSDN 120
FS KPKRVPD PP S+GIL+K+ T PS P P+ +
Sbjct: 61 FSWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPD 120
Query: 121 PPPP------------PPHVS----STILHKQSSINF-----------------GMLPKG 180
PP PP + S H +S I F G+L K
Sbjct: 121 LAPPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKD 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882352.1 | 7.1e-65 | 70.47 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
KAA0040932.1 | 6.7e-47 | 58.16 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
KAG6603169.1 | 1.3e-45 | 62.57 | hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0043502.1 | 2.2e-42 | 54.40 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... | [more] |
XP_022967687.1 | 6.5e-42 | 55.84 | actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CGG1 | 3.2e-47 | 58.16 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3BP86 | 1.1e-42 | 54.40 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1HRH7 | 3.1e-42 | 55.84 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
A0A5A7T8R0 | 2.0e-33 | 44.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BVE5 | 6.5e-32 | 43.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |