CmUC01G006840 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G006840
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Glutamate decarboxylase
Location	CmU531Chr01: 7550353 .. 7552589 (+)
RNA-Seq Expression	CmUC01G006840
Synteny	CmUC01G006840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGGATGAGTATATACATTCAACATTTGACTCTCGCTATGTCCAGAATATTCCTACACCAATTAAAGTTTACAGTCCCCCAAAACTCCATGCCTAAGGAGGCTGCTCTTCAAATCCAAGGCTCAATTTAGCCTCCTACACGTCACCACTTGGATGGAGCCAGAATGCAATAAGCTCATCATCGACTCTTCAACGCTCCCTTGAGATGGTGGATGAGAATTTGAAGACGTGAAGCTGTTGAATGATTTGTTGGTGGAGAAGAATAAGGAAACTGGATGGGATACTCCCATTCATGTGGATGGAGCCAGCGGTGGGTTCATAGCGCCGTTTTTGTCCAGAGCTTGAATGGGACTTCAGGCTAATTCCTTTGGTGACGAGCCATAAATGTTAGTGGGGGGTTGTTTACGCTGGAATTGGTTGAACTAAAGAAGATTTGCCTGAACAACTCATTTTCCATATCAATTACCTTGGAGCAGATCAACCCCCACCTTCACTCTCAACTTCTCCAAAGCTATAATTAATTCTAGTTAACAATAACTTGATTGAGATGAACAGTGGTGTTTGGATTGACAGAAAAAATTAAAAAAAATTTTTTTTTTTTTGTCTGAAATAACTTCTTTTAAGTTTCTCTTACTACTAAAACGTTTTTTTTTTTTTTTTTTAAATTAGTAAAAATTAGATGTAAAGTTAACCTTTTCACCCTTTTAATATTTTGGCGAAATTTTGGACAAGATTAACATCGAGATTTTATATATTTAGGTTTTTTCGATCAAATTTCACCAAGATTTTATATATTTTCTAAATCCTACTTAATTTTTCATAAAAAATTTGATCTTTCTCAAAATTAAAAAATGACAATGCAATCATCTAGCCATATTAATTAGTAAATTCATTGAAAAATTTGGAAATTCAAATAATTGTTGAAACAAAAATTAGGGGAAAGATTTTCAAATATATAAGATTTGGTATAAAATTTAAAAAGATTACATAATTTTTGGAAAAATTAGTAGAATCTTGGTGTTAATCATGCGATTTTTTTATCTAATTTCGATGGTCGGTCTTGCCCGAAATGGATTGTGAAACACTAGTTTAACCATTTACAAAAAGGGTGCTATTTTTTAAAGATGGAAACTTCAGGGGCTAATTCTGACAATTTCCCACAAAAATGTTTTTTAAACATTCATTGTAAAAAATAAAAACACTCATGTGTTTGGCATTTTTTTTTTCAAAATTGTTTTTATCTATAAGTTTGTTTGGTTTTTGTTATATAAAAGTGGTTTTATATAACAAACTAGTTTAGACTATAAAATATTATGAACTAATAATTTAAAATAATGGTCACTGTTGGTCGTTTGGGGGGTCGCTAATGGTAATAGTTGGAGGTGGCTGACAATGATGGTGGCACTAGAGTTGGCCAAAGGTTGCCATTAGTGGTGGTGTTCGAAGTTGGCACGCAGTGGCTACGGCCCATGGTGGTCGCATGAAGTGGCCGTTAGTAGTGGTTGCCAAAGTTAGTTGGAGGTGGTCTCTTTGGAGTTGACCGACGGACGTAGCCACACATGGAAGTGAGATAGATAGCTTTGGGTCATTTTGGTAATTTTAAAAATTATACAAATTAGGGAGATATTAACTATTAAACACTTAAATGTCATTTTTCTATATAACCCTTTATCTTAAACCAACTTATTTTATAAACTCATTTTTTTTTCAAAATTTATTATGAGTTGTTGCCAATCAGTTGAATTTTTTTTCCAAAAAGACTCATTTTTAAATTAAACACTTAGAGAATATATTATAAATACACCCAATTAAATAATTATTTTTTTAATACAACAACTACAAGGTGGGAGATTAAACCTCCAACATAACCAAGCTAAGCTCATTTTGGCATTGTATTTGCTTAACATTTGAATGGTTAAATTTTAGGGTCAAGCAAAATCATTGCTCAATATGATCAATTAATTGGGTTGGGTTTGGAGGGATATCGGAATGTGATGCAGAATTGTCATGACAATGCAATGGTATTGAAGGAAGGGCTTGAAAACATAGGGAGGTTTACGATAATGTCAAAGGATATAAGGGAGTGCTGGTGGTGGCATTTTGCCTGAAAGACTGGAGCCACCGCGACGAGTTTGAGGTGTCAAAGATGTTGCGGTGGTTTGGGTGGATTGTGCCGGCTTATCCAATGTCGGAGGTTGCCAAGCAAATGTCTATTCTTCGAAATCTTACATAG

mRNA sequence

ATGCATGGGATGAACGTGAAGCTGTTGAATGATTTGTTGGTGGAGAAGAATAAGGAAACTGGATGGGATACTCCCATTCATGTGGATGGAGCCAGCGGTGGGTTCATAGCGCCATCAACCCCCACCTTCACTCTCAACTTCTCCAAAGCTATAATTAATTCTAGGTCAAGCAAAATCATTGCTCAATATGATCAATTAATTGGGTTGGGTTTGGAGGGATATCGGAATGTGATGCAGAATTGTCATGACAATGCAATGGGAGTGCTGGTGGTGGCATTTTGCCTGAAAGACTGGAGCCACCGCGACGAGTTTGAGGTGTCAAAGATGTTGCGGTGGTTTGGGTGGATTGTGCCGGCTTATCCAATGTCGGAGGTTGCCAAGCAAATGTCTATTCTTCGAAATCTTACATAG

Coding sequence (CDS)

ATGCATGGGATGAACGTGAAGCTGTTGAATGATTTGTTGGTGGAGAAGAATAAGGAAACTGGATGGGATACTCCCATTCATGTGGATGGAGCCAGCGGTGGGTTCATAGCGCCATCAACCCCCACCTTCACTCTCAACTTCTCCAAAGCTATAATTAATTCTAGGTCAAGCAAAATCATTGCTCAATATGATCAATTAATTGGGTTGGGTTTGGAGGGATATCGGAATGTGATGCAGAATTGTCATGACAATGCAATGGGAGTGCTGGTGGTGGCATTTTGCCTGAAAGACTGGAGCCACCGCGACGAGTTTGAGGTGTCAAAGATGTTGCGGTGGTTTGGGTGGATTGTGCCGGCTTATCCAATGTCGGAGGTTGCCAAGCAAATGTCTATTCTTCGAAATCTTACATAG

Protein sequence

MHGMNVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAPSTPTFTLNFSKAIINSRSSKIIAQYDQLIGLGLEGYRNVMQNCHDNAMGVLVVAFCLKDWSHRDEFEVSKMLRWFGWIVPAYPMSEVAKQMSILRNLT

Homology

[Close]

BLAST of CmUC01G006840 vs. NCBI nr
Match: XP_022146312.1 (glutamate decarboxylase 4-like [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37
Identity = 103/204 (50.49%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 31  DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 90

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 91  LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 150

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNAM                   GV VVAF LKD S  DEFEVS+M
Sbjct: 151 LGFEGYRNVMQNCHDNAMVLKEGLENTGRFTIASKDVGVPVVAFSLKDRSRHDEFEVSEM 210

[Close]

BLAST of CmUC01G006840 vs. NCBI nr
Match: XP_022146466.1 (glutamate decarboxylase 4-like [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37
Identity = 103/204 (50.49%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 31  DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 90

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 91  LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 150

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNAM                   GV VVAF LKD S  DEFEVS+M
Sbjct: 151 LGFEGYRNVMQNCHDNAMVLKEGLENTGRFSIASKDVGVPVVAFSLKDRSRHDEFEVSEM 210

[Close]

BLAST of CmUC01G006840 vs. NCBI nr
Match: XP_038876342.1 (glutamate decarboxylase 4-like [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37
Identity = 102/204 (50.00%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKE+GWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKESGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 280 LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNA                   MGV VVAF LKD S  DEFEVS+M
Sbjct: 340 LGFEGYRNVMQNCHDNAMVLKEGLENTGRFTIVSKDMGVPVVAFSLKDRSRHDEFEVSEM 399

[Close]

BLAST of CmUC01G006840 vs. NCBI nr
Match: XP_038906456.1 (glutamate decarboxylase 4-like [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37
Identity = 102/204 (50.00%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKE+GWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKESGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 280 LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNA                   MGV VVAF LKD S  DEFEVS+M
Sbjct: 340 LGFEGYRNVMQNCHDNAMVLKEGLENTGRFTIVSKDMGVPVVAFSLKDRSRHDEFEVSEM 399

[Close]

BLAST of CmUC01G006840 vs. NCBI nr
Match: XP_031740882.1 (glutamate decarboxylase 4 [Cucumis sativus] >KAE8648287.1 hypothetical protein Csa_017840 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 3.8e-37
Identity = 102/204 (50.00%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKE+GWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKESGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 280 LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNA                   MGV VVAF LKD S  DEFEVS+M
Sbjct: 340 LGYEGYRNVMQNCHDNAMVLKEGLENTGRFTIVSKDMGVPVVAFSLKDRSRHDEFEVSEM 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy Swiss-Prot
Match: Q9ZPS4 (Glutamate decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=GAD3 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.2e-34
Identity = 90/204 (44.12%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNK+TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVM NC +N M                   GV +VAF LKD S  +EFEV++M
Sbjct: 340 LGFEGYRNVMDNCRENMMVLRQGLEKTGRFNIVSKENGVPLVAFSLKDSSRHNEFEVAEM 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy Swiss-Prot
Match: Q9ZPS3 (Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-33
Identity = 89/204 (43.63%), Postives = 101/204 (49.51%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNK+TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVM NC +N M                   GV +VAF LKD S  +EFEV+  
Sbjct: 340 LGFEGYRNVMDNCRENMMVLRQGLEKTGRFKIVSKENGVPLVAFSLKDSSRHNEFEVAHT 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy Swiss-Prot
Match: Q42521 (Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32
Identity = 89/204 (43.63%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVM+NC +N +                   GV +VAF LKD S   EFE+S M
Sbjct: 340 LGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDM 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy Swiss-Prot
Match: Q07346 (Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-32
Identity = 87/204 (42.65%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VK LNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVVWRNKDDLPDELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVM+NC +NA                   +GV +VAF LKD    +EFE+S+ 
Sbjct: 340 LGYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISET 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy Swiss-Prot
Match: Q42472 (Glutamate decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=GAD2 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.6e-32
Identity = 87/204 (42.65%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VK LNDLLV+KN+ETGW+TPIHVD ASGGFIAP                          
Sbjct: 219 DVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYG 278

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 279 LVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 338

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVM+NC +N +                   GV VVAF LKD S  +EFE+S+M
Sbjct: 339 LGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEM 398

[Close]

BLAST of CmUC01G006840 vs. ExPASy TrEMBL
Match: A0A6J1CZ92 (Glutamate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111015551 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 103/204 (50.49%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 31  DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 90

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 91  LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 150

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNAM                   GV VVAF LKD S  DEFEVS+M
Sbjct: 151 LGFEGYRNVMQNCHDNAMVLKEGLENTGRFTIASKDVGVPVVAFSLKDRSRHDEFEVSEM 210

[Close]

BLAST of CmUC01G006840 vs. ExPASy TrEMBL
Match: A0A6J1CZF8 (Glutamate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111015677 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 103/204 (50.49%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 31  DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 90

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 91  LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 150

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVMQNCHDNAM                   GV VVAF LKD S  DEFEVS+M
Sbjct: 151 LGFEGYRNVMQNCHDNAMVLKEGLENTGRFSIASKDVGVPVVAFSLKDRSRHDEFEVSEM 210

[Close]

BLAST of CmUC01G006840 vs. ExPASy TrEMBL
Match: A0A6J1HIB5 (Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111463243 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.1e-37
Identity = 101/204 (49.51%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNK+TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 280 LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVMQNCHDNA                   MGV VVAF LKD S  DEFEVS+M
Sbjct: 340 LGFEGYQNVMQNCHDNAMVLKQGLENTGRFSIASKDMGVPVVAFSLKDRSRHDEFEVSEM 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy TrEMBL
Match: A0A6J1E8Q9 (Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111430884 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.1e-37
Identity = 101/204 (49.51%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNK+TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 280 LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVMQNCHDNA                   MGV VVAF LKD S  DEFEVS+M
Sbjct: 340 LGFEGYQNVMQNCHDNAMVLKQGLENTGRFSIASKDMGVPVVAFSLKDRSRHDEFEVSEM 399

[Close]

BLAST of CmUC01G006840 vs. ExPASy TrEMBL
Match: A0A6J1JP71 (Glutamate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111487640 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.2e-37
Identity = 100/204 (49.02%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKN++TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNRKTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 280 LVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNA-------------------MGVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVMQNCHDNA                   MGV VVAF LKD S  DEFEVS+M
Sbjct: 340 LGFEGYQNVMQNCHDNAMVLKEGLENTGRFSIASKDMGVPVVAFSLKDRSRHDEFEVSEM 399

[Close]

BLAST of CmUC01G006840 vs. TAIR 10
Match: AT2G02000.1 (glutamate decarboxylase 3 )

HSP 1 Score: 144.4 bits (363), Expect = 6.5e-35
Identity = 90/204 (44.12%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNK+TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVM NC +N M                   GV +VAF LKD S  +EFEV++M
Sbjct: 340 LGFEGYRNVMDNCRENMMVLRQGLEKTGRFNIVSKENGVPLVAFSLKDSSRHNEFEVAEM 399

[Close]

BLAST of CmUC01G006840 vs. TAIR 10
Match: AT2G02010.1 (glutamate decarboxylase 4 )

HSP 1 Score: 141.7 bits (356), Expect = 4.2e-34
Identity = 89/204 (43.63%), Postives = 101/204 (49.51%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNK+TGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVM NC +N M                   GV +VAF LKD S  +EFEV+  
Sbjct: 340 LGFEGYRNVMDNCRENMMVLRQGLEKTGRFKIVSKENGVPLVAFSLKDSSRHNEFEVAHT 399

[Close]

BLAST of CmUC01G006840 vs. TAIR 10
Match: AT5G17330.1 (glutamate decarboxylase )

HSP 1 Score: 141.0 bits (354), Expect = 7.2e-34
Identity = 89/204 (43.63%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VKLLNDLLVEKNKETGWDTPIHVD ASGGFIAP                          
Sbjct: 220 DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS++IAQY QLI 
Sbjct: 280 LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQVIAQYYQLIR 339

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGYRNVM+NC +N +                   GV +VAF LKD S   EFE+S M
Sbjct: 340 LGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDM 399

[Close]

BLAST of CmUC01G006840 vs. TAIR 10
Match: AT1G65960.1 (glutamate decarboxylase 2 )

HSP 1 Score: 137.9 bits (346), Expect = 6.1e-33
Identity = 87/204 (42.65%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VK LNDLLV+KN+ETGW+TPIHVD ASGGFIAP                          
Sbjct: 90  DVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYG 149

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 150 LVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 209

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVM+NC +N +                   GV VVAF LKD S  +EFE+S+M
Sbjct: 210 LGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEM 269

[Close]

BLAST of CmUC01G006840 vs. TAIR 10
Match: AT1G65960.2 (glutamate decarboxylase 2 )

HSP 1 Score: 137.9 bits (346), Expect = 6.1e-33
Identity = 87/204 (42.65%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 5   NVKLLNDLLVEKNKETGWDTPIHVDGASGGFIAP-------------------------- 64
           +VK LNDLLV+KN+ETGW+TPIHVD ASGGFIAP                          
Sbjct: 219 DVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYG 278

Query: 65  ------------------------------STPTFTLNFSKAIINSRSSKIIAQYDQLIG 124
                                           PTFTLNFSK      SS+IIAQY QLI 
Sbjct: 279 LVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSKG-----SSQIIAQYYQLIR 338

Query: 125 LGLEGYRNVMQNCHDNAM-------------------GVLVVAFCLKDWSHRDEFEVSKM 134
           LG EGY+NVM+NC +N +                   GV VVAF LKD S  +EFE+S+M
Sbjct: 339 LGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEM 398

The following BLAST results are available for this feature:

BLAST of CmUC01G006840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146312.1	1.0e-37	50.49	glutamate decarboxylase 4-like [Momordica charantia]	[more]
XP_022146466.1	1.0e-37	50.49	glutamate decarboxylase 4-like [Momordica charantia]	[more]
XP_038876342.1	2.9e-37	50.00	glutamate decarboxylase 4-like [Benincasa hispida]	[more]
XP_038906456.1	2.9e-37	50.00	glutamate decarboxylase 4-like [Benincasa hispida]	[more]
XP_031740882.1	3.8e-37	50.00	glutamate decarboxylase 4 [Cucumis sativus] >KAE8648287.1 hypothetical protein C...	[more]

BLAST of CmUC01G006840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPS4	9.2e-34	44.12	Glutamate decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=GAD3 PE=2 SV=1	[more]
Q9ZPS3	6.0e-33	43.63	Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1	[more]
Q42521	1.0e-32	43.63	Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2	[more]
Q07346	3.0e-32	42.65	Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1	[more]
Q42472	8.6e-32	42.65	Glutamate decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=GAD2 PE=1 SV=1	[more]

BLAST of CmUC01G006840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ92	4.9e-38	50.49	Glutamate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111015551 PE=3 SV=1	[more]
A0A6J1CZF8	4.9e-38	50.49	Glutamate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111015677 PE=3 SV=1	[more]
A0A6J1HIB5	4.1e-37	49.51	Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111463243 PE=3 SV=1	[more]
A0A6J1E8Q9	4.1e-37	49.51	Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111430884 PE=3 SV=1	[more]
A0A6J1JP71	9.2e-37	49.02	Glutamate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111487640 PE=3 SV=1	[more]

BLAST of CmUC01G006840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02000.1	6.5e-35	44.12	glutamate decarboxylase 3	[more]
AT2G02010.1	4.2e-34	43.63	glutamate decarboxylase 4	[more]
AT5G17330.1	7.2e-34	43.63	glutamate decarboxylase	[more]
AT1G65960.1	6.1e-33	42.65	glutamate decarboxylase 2	[more]
AT1G65960.2	6.1e-33	42.65	glutamate decarboxylase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1150.160		coord: 76..135 e-value: 6.2E-11 score: 43.9
None	No IPR available	PANTHER	PTHR43321:SF2	GLUTAMATE DECARBOXYLASE	coord: 5..38
None	No IPR available	PANTHER	PTHR43321:SF2	GLUTAMATE DECARBOXYLASE	coord: 87..134 coord: 40..86
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 3..52 e-value: 6.6E-6 score: 27.2
IPR010107	Glutamate decarboxylase	PANTHER	PTHR43321	GLUTAMATE DECARBOXYLASE	coord: 5..38
IPR010107	Glutamate decarboxylase	PANTHER	PTHR43321	GLUTAMATE DECARBOXYLASE	coord: 87..134 coord: 40..86
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 5..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G006840.1	CmUC01G006840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006536	glutamate metabolic process
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003824	catalytic activity