CmUC01G006450 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA MENATATATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN Homology
BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_038875254.1 (uncharacterized protein LOC120067758 [Benincasa hispida]) HSP 1 Score: 131.3 bits (329), Expect = 3.6e-27 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_016903705.1 (PREDICTED: uncharacterized protein LOC103504534 [Cucumis melo] >KAA0046371.1 uncharacterized protein E6C27_scaffold149G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 6.3e-24 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_011655448.1 (uncharacterized protein LOC105435535 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 3.5e-22 Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of CmUC01G006450 vs. NCBI nr
Match: KAE8648597.1 (hypothetical protein Csa_008169, partial [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 2.5e-20 Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_022146403.1 (uncharacterized protein LOC111015628 [Momordica charantia]) HSP 1 Score: 107.8 bits (268), Expect = 4.2e-20 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A5A7TYE7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00850 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.0e-24 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A1S4E6T1 (uncharacterized protein LOC103504534 OS=Cucumis melo OX=3656 GN=LOC103504534 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.0e-24 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A0A0KPB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561250 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22 Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A6J1CYH4 (uncharacterized protein LOC111015628 OS=Momordica charantia OX=3673 GN=LOC111015628 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.0e-20 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A6J1E1V2 (uncharacterized protein LOC111430025 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430025 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.9e-19 Identity = 58/79 (73.42%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of CmUC01G006450 vs. TAIR 10
Match: AT1G67920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 6.1e-09 Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of CmUC01G006450 vs. TAIR 10
Match: AT1G24600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 2.0e-07 Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|