CmUC01G006450 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G006450
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr01: 6929271 .. 6929510 (+)
RNA-Seq ExpressionCmUC01G006450
SyntenyCmUC01G006450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA

mRNA sequence

ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA

Coding sequence (CDS)

ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA

Protein sequence

MENATATATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
Homology
BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_038875254.1 (uncharacterized protein LOC120067758 [Benincasa hispida])

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-27
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0

Query: 7  TATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSP 66
          T T A DSDSDVSQLPIHSQV+KIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSP
Sbjct: 5  TPTAAGDSDSDVSQLPIHSQVQKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSP 64

Query: 67 LGLAAERPISVGN 80
          LGLAAERPISVGN
Sbjct: 65 LGLAAERPISVGN 77

BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_016903705.1 (PREDICTED: uncharacterized protein LOC103504534 [Cucumis melo] >KAA0046371.1 uncharacterized protein E6C27_scaffold149G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 6.3e-24
Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0

Query: 8  ATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPL 67
          +T A DSDS+VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPL
Sbjct: 4  STAALDSDSEVSQVPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPL 63

Query: 68 GLAAERPISVGN 80
          GL ++ PISVGN
Sbjct: 64 GLPSDTPISVGN 75

BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_011655448.1 (uncharacterized protein LOC105435535 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 3.5e-22
Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 8  ATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPL 67
          +  A DSDS+VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPL
Sbjct: 4  SAAALDSDSEVSHLPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPL 63

Query: 68 GLAAERPISVGN 80
          GL ++  ISVGN
Sbjct: 64 GLPSDTSISVGN 75

BLAST of CmUC01G006450 vs. NCBI nr
Match: KAE8648597.1 (hypothetical protein Csa_008169, partial [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 2.5e-20
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 8  ATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPL 67
          +  A DSDS+VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPL
Sbjct: 4  SAAALDSDSEVSHLPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPL 63

Query: 68 GLAAERPIS 77
          GL ++  IS
Sbjct: 64 GLPSDTSIS 72

BLAST of CmUC01G006450 vs. NCBI nr
Match: XP_022146403.1 (uncharacterized protein LOC111015628 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 4.2e-20
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 11 ASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLA 70
          A D DSD +Q+P+H QV KIK+EIEKIKHPSLQQSEM THLLLRGISISK RSRSPLGLA
Sbjct: 5  AGDGDSD-AQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLA 64

Query: 71 AERPISVGN 80
          AERPISVGN
Sbjct: 65 AERPISVGN 72

BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A5A7TYE7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00850 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.0e-24
Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0

Query: 8  ATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPL 67
          +T A DSDS+VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPL
Sbjct: 4  STAALDSDSEVSQVPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPL 63

Query: 68 GLAAERPISVGN 80
          GL ++ PISVGN
Sbjct: 64 GLPSDTPISVGN 75

BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A1S4E6T1 (uncharacterized protein LOC103504534 OS=Cucumis melo OX=3656 GN=LOC103504534 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.0e-24
Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 0

Query: 8  ATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPL 67
          +T A DSDS+VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPL
Sbjct: 4  STAALDSDSEVSQVPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPL 63

Query: 68 GLAAERPISVGN 80
          GL ++ PISVGN
Sbjct: 64 GLPSDTPISVGN 75

BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A0A0KPB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561250 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22
Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 8  ATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPL 67
          +  A DSDS+VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPL
Sbjct: 4  SAAALDSDSEVSHLPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPL 63

Query: 68 GLAAERPISVGN 80
          GL ++  ISVGN
Sbjct: 64 GLPSDTSISVGN 75

BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A6J1CYH4 (uncharacterized protein LOC111015628 OS=Momordica charantia OX=3673 GN=LOC111015628 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-20
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 11 ASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLA 70
          A D DSD +Q+P+H QV KIK+EIEKIKHPSLQQSEM THLLLRGISISK RSRSPLGLA
Sbjct: 5  AGDGDSD-AQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLA 64

Query: 71 AERPISVGN 80
          AERPISVGN
Sbjct: 65 AERPISVGN 72

BLAST of CmUC01G006450 vs. ExPASy TrEMBL
Match: A0A6J1E1V2 (uncharacterized protein LOC111430025 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430025 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-19
Identity = 58/79 (73.42%), Postives = 63/79 (79.75%), Query Frame = 0

Query: 1  MENATATATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISK 60
          MEN+TA A    D     SQ P+H QV KIK+EIEKIKHPSLQQSEM+THLLLR +SISK
Sbjct: 1  MENSTAVADAGLD-----SQAPVHIQVVKIKREIEKIKHPSLQQSEMSTHLLLRDMSISK 60

Query: 61 PRSRSPLGLAAERPISVGN 80
          PR RSPLGLAAER ISVGN
Sbjct: 61 PRPRSPLGLAAERSISVGN 74

BLAST of CmUC01G006450 vs. TAIR 10
Match: AT1G67920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 6.1e-09
Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 0

Query: 23 IHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN 80
          IHSQVEKIKKE EKI+ PSLQQ EM    +L  I   + RSRSPLGL  ER ISVGN
Sbjct: 15 IHSQVEKIKKEFEKIRQPSLQQPEMRR--VLSEIK-RRQRSRSPLGL-GERSISVGN 67

BLAST of CmUC01G006450 vs. TAIR 10
Match: AT1G24600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.0e-07
Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 11 ASDSDSDVSQLP-IHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGL 70
          A+  D     +P IHSQV KIK+E EKI+HPSL+Q EM   L+ R I +   RSRSPLGL
Sbjct: 5  ANHGDDVQESVPIIHSQVVKIKREFEKIQHPSLKQPEM--PLVFREI-MGPRRSRSPLGL 64

Query: 71 A-AERPISVGN 80
             ER I VGN
Sbjct: 65 GERERSIPVGN 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875254.13.6e-2794.52uncharacterized protein LOC120067758 [Benincasa hispida][more]
XP_016903705.16.3e-2486.11PREDICTED: uncharacterized protein LOC103504534 [Cucumis melo] >KAA0046371.1 unc... [more]
XP_011655448.13.5e-2283.33uncharacterized protein LOC105435535 [Cucumis sativus][more]
KAE8648597.12.5e-2082.61hypothetical protein Csa_008169, partial [Cucumis sativus][more]
XP_022146403.14.2e-2084.06uncharacterized protein LOC111015628 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TYE73.0e-2486.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S4E6T13.0e-2486.11uncharacterized protein LOC103504534 OS=Cucumis melo OX=3656 GN=LOC103504534 PE=... [more]
A0A0A0KPB91.7e-2283.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561250 PE=4 SV=1[more]
A0A6J1CYH42.0e-2084.06uncharacterized protein LOC111015628 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1E1V23.9e-1973.42uncharacterized protein LOC111430025 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT1G67920.16.1e-0966.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G24600.12.0e-0754.93unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..79
NoneNo IPR availablePANTHERPTHR34780:SF2BNAA07G38580D PROTEINcoord: 1..79
NoneNo IPR availablePANTHERPTHR34780OS08G0427800 PROTEINcoord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G006450.1CmUC01G006450.1mRNA