CmUC01G001450 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G001450
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr01: 1250386 .. 1250709 (+)
RNA-Seq Expression	CmUC01G001450
Synteny	CmUC01G001450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCCTCCTCCTCCACTGGAGATCGCGACCTCGCTCTTTATCCTCCCTCTCAACAGGTATTATCACCATTGCCTTCGATTTTGAATGTTCCTTTTTCGATTCTGAGGAATTTTGATGACCTAATCGGTTTTTTTTCTTTGATTTGGTGGATTGTGTTTCTTTCTAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCTTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGA

mRNA sequence

ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCCTCCTCCTCCACTGGAGATCGCGACCTCGCTCTTTATCCTCCCTCTCAACAGGTATTATCACCATTGCCTTCGATTTTGAATGTTCCTTTTTCGATTCTGAGGAATTTTGATGACCTAATCGGTTTTTTTTCTTTGATTTGGTGGATTGTGTTTCTTTCTAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCTTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGA

Coding sequence (CDS)

ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCCTCCTCCTCCACTGGAGATCGCGACCTCGCTCTTTATCCTCCCTCTCAACAGGTATTATCACCATTGCCTTCGATTTTGAATGTTCCTTTTTCGATTCTGAGGAATTTTGATGACCTAATCGGTTTTTTTTCTTTGATTTGGTGGATTGTGTTTCTTTCTAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCTTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGA

Protein sequence

MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSILNVPFSILRNFDDLIGFFSLIWWIVFLSRASFRNLVRIEVAARILRRRRRNLRRGLMD

Homology

[Close]

BLAST of CmUC01G001450 vs. NCBI nr
Match: KAA0042639.1 (uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa] >TYK06040.1 uncharacterized protein E5676_scaffold376G001410 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 2.0e-09
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSI 50
          MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q LSP PS+
Sbjct: 1  MKGSCTLLASVLAASTMAF--SSSSSSTGDRDLPLYPPSHQALSPSPSL 47

[Close]

BLAST of CmUC01G001450 vs. NCBI nr
Match: XP_008437456.1 (PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-06
Identity = 38/45 (84.44%), Postives = 38/45 (84.44%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSP 46
          MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q   P
Sbjct: 1  MKGSCTLLASVLAASTMAF--SSSSSSTGDRDLPLYPPSHQGFVP 43

[Close]

BLAST of CmUC01G001450 vs. NCBI nr
Match: KAG6605612.1 (Granule-bound starch synthase 1, chloroplastic/amyloplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPS 40
          MKG+CTLLASVLAASTMAFSSSSSSSS GDRDLALYPPS
Sbjct: 1  MKGTCTLLASVLAASTMAFSSSSSSSS-GDRDLALYPPS 38

[Close]

BLAST of CmUC01G001450 vs. NCBI nr
Match: KAG7035524.1 (hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPS 40
          MKG+CTLLASVLAASTMAFSSSSSSSS GDRDLALYPPS
Sbjct: 1  MKGTCTLLASVLAASTMAFSSSSSSSS-GDRDLALYPPS 38

[Close]

BLAST of CmUC01G001450 vs. NCBI nr
Match: KAE8647827.1 (hypothetical protein Csa_000617 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 5.2e-05
Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSS--TGDRDLALYPPSQQ 42
          MKGSCTLLASVLAASTMAFSSSSSSSS  TGDRDL LY  S Q
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSSSFTGDRDLPLYSLSHQ 43

[Close]

BLAST of CmUC01G001450 vs. ExPASy TrEMBL
Match: A0A5A7TMP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001410 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.9e-10
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSI 50
          MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q LSP PS+
Sbjct: 1  MKGSCTLLASVLAASTMAF--SSSSSSTGDRDLPLYPPSHQALSPSPSL 47

[Close]

BLAST of CmUC01G001450 vs. ExPASy TrEMBL
Match: A0A1S3AU25 (uncharacterized protein LOC103482871 OS=Cucumis melo OX=3656 GN=LOC103482871 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.0e-07
Identity = 38/45 (84.44%), Postives = 38/45 (84.44%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSP 46
          MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q   P
Sbjct: 1  MKGSCTLLASVLAASTMAF--SSSSSSTGDRDLPLYPPSHQGFVP 43

[Close]

BLAST of CmUC01G001450 vs. ExPASy TrEMBL
Match: A0A0A0KQK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146940 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-05
Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSS--TGDRDLALYPPSQQ 42
          MKGSCTLLASVLAASTMAFSSSSSSSS  TGDRDL LY  S Q
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSSSFTGDRDLPLYSLSHQ 43

[Close]

BLAST of CmUC01G001450 vs. ExPASy TrEMBL
Match: A0A6J1HZR1 (uncharacterized protein LOC111469110 OS=Cucurbita maxima OX=3661 GN=LOC111469110 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQ 42
          MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSNE-DRDLALNPPSRE 40

[Close]

BLAST of CmUC01G001450 vs. ExPASy TrEMBL
Match: A0A6J1ET49 (uncharacterized protein LOC111435756 OS=Cucurbita moschata OX=3662 GN=LOC111435756 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 1  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQ 42
          MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++
Sbjct: 1  MKGSCTLLASVLAASTMAFSSSSSSSNE-DRDLALNPPSRE 40

The following BLAST results are available for this feature:

BLAST of CmUC01G001450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042639.1	2.0e-09	85.71	uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_008437456.1	1.2e-06	84.44	PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]	[more]
KAG6605612.1	2.8e-06	94.87	Granule-bound starch synthase 1, chloroplastic/amyloplastic, partial [Cucurbita ...	[more]
KAG7035524.1	2.8e-06	94.87	hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAE8647827.1	5.2e-05	86.05	hypothetical protein Csa_000617 [Cucumis sativus]	[more]

BLAST of CmUC01G001450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC01G001450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMP9	9.9e-10	85.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AU25	6.0e-07	84.44	uncharacterized protein LOC103482871 OS=Cucumis melo OX=3656 GN=LOC103482871 PE=...	[more]
A0A0A0KQK5	2.5e-05	86.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146940 PE=4 SV=1	[more]
A0A6J1HZR1	4.3e-05	85.37	uncharacterized protein LOC111469110 OS=Cucurbita maxima OX=3661 GN=LOC111469110...	[more]
A0A6J1ET49	4.3e-05	85.37	uncharacterized protein LOC111435756 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]

BLAST of CmUC01G001450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G001450.1	CmUC01G001450.1	mRNA