Clc11G17680 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G17680
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Auxin-responsive family protein
Location	ClcChr11: 28406357 .. 28407028 (+)
RNA-Seq Expression	Clc11G17680
Synteny	Clc11G17680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAGAAAATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTGGGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGAGCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATAATGAAGATGAAGATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAGCTTTATGTTTTTTGAATTTCATGTATGGAAATTAGTGGGAGTCGGAGAGAGTCGTTACGTATCAAAGTTTCGTTTGGTATCTTTTTTGTTTTAAAAAAATAGTGAGAATTCAAAATTATGTATTTACCATGTAATTTCTTTGTCTTGTATATCTACTTTTCGTAATTAGAATTGTATTTATGGATAATGCTTTTTTTTTT

mRNA sequence

AAAAAAAAAAAAAAAAAAGAAAATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTGGGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGAGCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATAATGAAGATGAAGATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAGCTTTATGTTTTTTGAATTTCATGTATGGAAATTAGTGGGAGTCGGAGAGAGTCGTTACGTATCAAAGTTTCGTTTGGTATCTTTTTTGTTTTAAAAAAATAGTGAGAATTCAAAATTATGTATTTACCATGTAATTTCTTTGTCTTGTATATCTACTTTTCGTAATTAGAATTGTATTTATGGATAATGCTTTTTTTTTT

Coding sequence (CDS)

ATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTGGGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGAGCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATAATGAAGATGAAGATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAGCTTTATGTTTTTTGA

Protein sequence

MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

Homology

[Close]

BLAST of Clc11G17680 vs. NCBI nr
Match: XP_038899559.1 (auxin-responsive protein SAUR78 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 2.1e-60
Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVC  K+ EEEDF+   QQ+QQLE
Sbjct: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKM-EEEDFE---QQKQQLE 60

Query: 61  KVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRC 120
           KVSGN+VILYVGSTRKRYAISSKYL+HPLLNALIDKSKSKKL  +  D+D+++DCISVRC
Sbjct: 61  KVSGNDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLAN--DDDEEEDCISVRC 120

Query: 121 EVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           EVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Sbjct: 121 EVVLFDHLLWMLENSDPNISFDSNLEELAELYVF 148

[Close]

BLAST of Clc11G17680 vs. NCBI nr
Match: XP_011653970.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical protein Csa_012026 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+   +EEDF     +QQ  +
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEK---QEEDF-----EQQIEQ 60

Query: 61  KVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDED----DDDDCI 120
           KVSG+NVILYVGSTRK+YAI+SKYL+HPLLNALIDKSKSKKL +D++D+D    DD++CI
Sbjct: 61  KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECI 120

Query: 121 SVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
            VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 LVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 150

[Close]

BLAST of Clc11G17680 vs. NCBI nr
Match: XP_008444291.1 (PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 6.4e-57
Identity = 128/161 (79.50%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+   +EEDF     +QQ  +
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEK---QEEDF-----EQQFDQ 60

Query: 61  KVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDE------DDDD 120
           KVSG NNV+LYVGSTRK+YAI+SKYL HPLLNALIDKSKSKKL +D++DE       DD+
Sbjct: 61  KVSGNNNVVLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDDGDDE 120

Query: 121 DCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           DCI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 DCILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 153

[Close]

BLAST of Clc11G17680 vs. NCBI nr
Match: KAG7024703.1 (hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 122/159 (76.73%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFD-----NIHQQ 60
           M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCER +EE E+ +       H++
Sbjct: 1   MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHGEHEE 60

Query: 61  QQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDC 120
           ++  E+VSG+NVI+YVGSTRKRY ISSKYL+HPLLNALIDKSK  K    NED+DDD  C
Sbjct: 61  REGFEEVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPK---GNEDDDDDHKC 120

Query: 121 ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           ISVRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Sbjct: 121 ISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF 156

[Close]

BLAST of Clc11G17680 vs. NCBI nr
Match: XP_023536060.1 (auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-56
Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQ-- 60
           M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVC+R +EE E+ +   ++++   
Sbjct: 1   MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCDRTMEEHEEREEHEEREEHEG 60

Query: 61  LEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISV 120
            EKVSG+NVI+YVGSTRKRYAISSKYL+HPLLNALIDKSK  K      +EDDDD+CISV
Sbjct: 61  FEKVSGSNVIIYVGSTRKRYAISSKYLSHPLLNALIDKSKPPK----GNNEDDDDECISV 120

Query: 121 RCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           RCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Sbjct: 121 RCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF 152

[Close]

BLAST of Clc11G17680 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 65  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVV 124
           NN+ ++YVG TR+ Y +    ++HPL   L+D+S S+ +  D E        I V CEVV
Sbjct: 41  NNLHVVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSIEQDRE--------IVVACEVV 100

Query: 125 LFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           LF+HLLWML++         ++EELAE Y +
Sbjct: 101 LFEHLLWMLKSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of Clc11G17680 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-11
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 68  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVVLFDH 127
           ++YVG +R+ Y +SS  + HPL   L+D+S S+ +     +E  D + + V CEVVLF+H
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRS-SRFI-----EERHDQETVLVACEVVLFEH 105

Query: 128 LLWMLENS-----DPNITFDSNLEELAELYVF 155
           LLWML+NS     D +     ++EELAE Y +
Sbjct: 106 LLWMLKNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of Clc11G17680 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 69  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVVLFDHL 128
           +YVG TR+ Y +SS  ++HPL          ++LA  +     +D  ISV CEVVLF+HL
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLF---------QQLAAVDGGCGSEDGSISVSCEVVLFEHL 110

Query: 129 LWMLENSDPNITFDSNLEELAELY 153
           LWMLEN+D + +   ++ EL E Y
Sbjct: 111 LWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of Clc11G17680 vs. ExPASy TrEMBL
Match: A0A1S3B9J9 (uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.1e-57
Identity = 128/161 (79.50%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+   +EEDF     +QQ  +
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEK---QEEDF-----EQQFDQ 60

Query: 61  KVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDE------DDDD 120
           KVSG NNV+LYVGSTRK+YAI+SKYL HPLLNALIDKSKSKKL +D++DE       DD+
Sbjct: 61  KVSGNNNVVLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDDGDDE 120

Query: 121 DCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           DCI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 DCILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 153

[Close]

BLAST of Clc11G17680 vs. ExPASy TrEMBL
Match: A0A6J1C0S4 (uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007398 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 120/155 (77.42%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVW-VCERKLEEEEDFDNIHQQQQQL 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+W +C  K+EEEE+ +  H QQQQL
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDH-QQQQL 60

Query: 61  EKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVR 120
           EKV G+NVI+YVGSTRK+Y ISSK+L+HPL+NALIDKSKSK     ++ + +D + ISVR
Sbjct: 61  EKVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSK-----SKSKSEDCEAISVR 120

Query: 121 CEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           CEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Sbjct: 121 CEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF 149

[Close]

BLAST of Clc11G17680 vs. ExPASy TrEMBL
Match: B9RI47 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.0e-36
Identity = 96/154 (62.34%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE++W  + K E+EE     HQ      
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELW-GDHKEEDEE-----HQS----- 60

Query: 61  KVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRC 120
                   L+VGSTRKRY ISSKYL+HPL+NALI KSK ++           ++ + V+C
Sbjct: 61  -------TLFVGSTRKRYVISSKYLSHPLVNALIQKSKQRQ----------GEEILVVKC 120

Query: 121 EVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           EVVLFDHLLWMLEN+DPN++FDS LEELAELYVF
Sbjct: 121 EVVLFDHLLWMLENADPNLSFDS-LEELAELYVF 125

[Close]

BLAST of Clc11G17680 vs. ExPASy TrEMBL
Match: W9S1R7 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002133 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 5.2e-36
Identity = 89/159 (55.97%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKINS+LRKCKSLSRQL RSSSYS+LRSKS+R+D WV           D+  QQQ QL+
Sbjct: 1   MKKINSILRKCKSLSRQLARSSSYSNLRSKSSRQDFWV--------STHDHCDQQQDQLD 60

Query: 61  KVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDD-----DDDC 120
           +    +  ++VGS +KRY IS+K+L+HPLL ALIDKS+ K  + DN +  D     +++ 
Sbjct: 61  EYDQKSATIFVGSAKKRYVISTKHLSHPLLEALIDKSRQKGSSGDNNNIQDHINNNNNNV 120

Query: 121 ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           + V+CEVVLFDHLLWMLEN+DP      +LEELA LYVF
Sbjct: 121 LVVKCEVVLFDHLLWMLENADPVSLGSESLEELAALYVF 151

[Close]

BLAST of Clc11G17680 vs. ExPASy TrEMBL
Match: M5WKH8 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G140200 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.2e-35
Identity = 95/155 (61.29%), Postives = 108/155 (69.68%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLE 60
           MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTRED+WV     ++  + D+ H Q     
Sbjct: 1   MKKINFLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVGHG--DKMHEIDHHHHQ----- 60

Query: 61  KVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRC 120
                  I++VGSTRKRY ISSKYL HPLLNALIDKS  +K   + ED       I V C
Sbjct: 61  ------TIIFVGSTRKRYVISSKYLNHPLLNALIDKSSKQKQGGEAED-------ILVNC 120

Query: 121 EVVLFDHLLWMLEN-SDPNITFDSNLEELAELYVF 155
           EVVLFDHL+WMLEN +DP+     +LEELA LYVF
Sbjct: 121 EVVLFDHLIWMLENAADPSFGASESLEELAALYVF 135

[Close]

BLAST of Clc11G17680 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 9.4e-22
Identity = 65/152 (42.76%), Postives = 88/152 (57.89%), Query Frame = 0


Query: 3   KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKV 62
           ++  +LR+CKS+S QLGRS SY+SLRSKS R D                 H Q       
Sbjct: 6   RLMMMLRRCKSVSTQLGRSYSYTSLRSKSARRD--------------PQDHLQDVDQSPT 65

Query: 63  SGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDC-ISVRCE 122
                 + VG T+K Y IS K+L HPLLNAL++K +  +     ED+++D  C I+V+CE
Sbjct: 66  PSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQQRYE-----EDDNEDGSCIITVKCE 125

Query: 123 VVLFDHLLWMLENSDPNITFDSNLEELAELYV 154
           VVLFDHLLWMLE  D  +    +L++ A LY+
Sbjct: 126 VVLFDHLLWMLEYGD-EVHILESLDDFAHLYL 137

[Close]

BLAST of Clc11G17680 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 65  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVV 124
           NN+ ++YVG TR+ Y +    ++HPL   L+D+S S+ +  D E        I V CEVV
Sbjct: 41  NNLHVVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSIEQDRE--------IVVACEVV 100

Query: 125 LFDHLLWMLENSDPNITFDSNLEELAELYVF 155
           LF+HLLWML++         ++EELAE Y +
Sbjct: 101 LFEHLLWMLKSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of Clc11G17680 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-12
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 68  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVVLFDH 127
           ++YVG +R+ Y +SS  + HPL   L+D+S S+ +     +E  D + + V CEVVLF+H
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRS-SRFI-----EERHDQETVLVACEVVLFEH 105

Query: 128 LLWMLENS-----DPNITFDSNLEELAELYVF 155
           LLWML+NS     D +     ++EELAE Y +
Sbjct: 106 LLWMLKNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of Clc11G17680 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-11
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 69  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDCISVRCEVVLFDHL 128
           +YVG TR+ Y +SS  ++HPL          ++LA  +     +D  ISV CEVVLF+HL
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLF---------QQLAAVDGGCGSEDGSISVSCEVVLFEHL 110

Query: 129 LWMLENSDPNITFDSNLEELAELY 153
           LWMLEN+D + +   ++ EL E Y
Sbjct: 111 LWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of Clc11G17680 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 26/91 (28.57%), Postives = 45/91 (49.45%), Query Frame = 0


Query: 54  QQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDD 113
           Q  +    V   N+ +YVG   +R+ I + YL+H L   L++K+       + E   D  
Sbjct: 71  QSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKA-------EEEFGFDQS 130

Query: 114 DCISVRCEVVLFDHLLWMLENSDPNITFDSN 145
             +++ CEV  F +LL  +EN+  ++  D N
Sbjct: 131 GALTIPCEVETFKYLLKCMENNLKDLHPDDN 154

The following BLAST results are available for this feature:

BLAST of Clc11G17680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899559.1	2.1e-60	85.06	auxin-responsive protein SAUR78 [Benincasa hispida]	[more]
XP_011653970.1	1.5e-58	80.38	auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical pro...	[more]
XP_008444291.1	6.4e-57	79.50	PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]	[more]
KAG7024703.1	1.4e-56	76.73	hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023536060.1	2.5e-56	77.56	auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc11G17680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9E1	1.1e-11	40.66	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q9LQI6	7.3e-11	41.30	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q29PU2	4.7e-10	42.86	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of Clc11G17680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9J9	3.1e-57	79.50	uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=...	[more]
A0A6J1C0S4	1.5e-54	77.42	uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
B9RI47	3.0e-36	62.34	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1	[more]
W9S1R7	5.2e-36	55.97	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002133 PE=3 SV=1	[more]
M5WKH8	1.2e-35	61.29	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G140200 PE=3 SV=1	[more]

BLAST of Clc11G17680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12955.1	9.4e-22	42.76	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	8.0e-13	40.66	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	5.2e-12	41.30	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	3.3e-11	42.86	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	3.0e-04	28.57	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 33..132 e-value: 2.5E-13 score: 50.0
None	No IPR available	PANTHER	PTHR31374:SF195	EXPRESSED PROTEIN	coord: 3..154
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 3..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G17680.1	Clc11G17680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016020	membrane