Clc11G13100 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G13100
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr11: 23305168 .. 23307574 (-)
RNA-Seq ExpressionClc11G13100
SyntenyClc11G13100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAGAATAAAAGCTTCTCCGCATCTCATTTCCCGCTATCTCAATTTCGACAAAACAAATTCAAAACCAAATCCCAATCGTCAAGCTCTTTCCGAAAAGCTCATCGCCTTCATACAACAATGTGTAAGCATCAAACCATTGAAACAAATTCACACCCAGATGATTACGAACTCAATTCACAAACCCAATTCGTTTCTCTACAAGATCGTCGACCTCAAAGATTTCGCCTATGCCTCGGATTTCTTCTCCACCATTCTCGAGCCCACCCAGTACTCTTTCAATGTCATGATTCGTGGCCTCTCGACAACTTGGAATAAGTCTTCTCTTGCCCTTGAATTCTATTCTCGAATGAAATTTCTGGGTTTGAAACCCAATAAACTCACCTACCCATTTCTGTTTATAGCGTGTTCGAATCTTTTGGCTGTTGAAAATGGGCGGGTGGGTCATTGTTCTGTGATTAAACGTGGGTTGGACGAGGATGGTCATGTGAGTCATTCTTTGATTACGATGTATGCCCGGTGTGGGCAAGTGGGTGATGCCCGGAAGGTGTTTGATGAAATTCCTGAGAAGGATTTGGTTTCGTGGAACTCTATGATTTCGGGTTACTCGAAGATGAGGCATGCTGGTGAGGCTGTGGGTTTGTTTAGAGAGATGATGGAAGCTGGGTTTCAGCCCAATGAGATGACTTTAGTTAGTGTCTTGGGGGCGTGTGGAGAGCTGGGGGATTTGAAACTTGGTACTTGGGTGGAGGAGTTTGTGGTGGAGAATAAGATGGTGTTGAATTCTTTTATGGGATCTGCATTGATCCATATGTATGGAAAGTGTGGTGATTTAGTGTCAGCAAGGAGGATTTTTGATTCTATGAAGAAGAAAGATAAAGTTACTTGGAATGCCATGATTACAGGGCAAGTGAATGACCACCTTCTCTTTGAACCCATACTTAGCAATATTGTCAATAGATGATAGGTTAAATATATGTTATATTCTATGTAGTTTAAAAAGTTTCAATTTAGTCCCTTATATTTAAACAACTTTCAACAACACCATGTTGTTAGTGGATGTTAGGTATGGCTCATGATACTAAGTGAATTTGCGCAAGAACTTGGAGGACGAACTAAGCCACTAGGGAGAAGAAAAGTACAAGTTTTGACAACTTCAAAATTTGGAGATGAAATTAAAATATTTCTGCTCTTAGGTGGCCTATTTCTTCCTCTAAATCTATGCTAACTCATTAAGTATCATGTTATTCAGTCTACTATTAGCTACATTTAATAACATTAGTGGAAATTTTAAAACAAGGGACTAAATTGAAACCATTTAAATGATGGACTAAATCGCAAAAATGCTCAAACATTAATGACTAAAACATGTATTCAGTCTAGATAATAATGTCTCTGTTCCAAACTTTATGAAATCTTACTTTTTTCTTGTACTCCAATCAATCAATTGCAGATATGCGCAGAATGGGATGTCAGAGGAAGCTATTAAATTGTTTCAAGACATGAGAATGAGCAGTACAGCTCCAGATCAAATCACATTGATAGGAATACTTTCTGCCTGTGCCTCAATTGGAGCCCTTGACTTGGGGAAGCAAGTAGAGATTTATGCCTCAGAAAGAGGCTTTCGAGACGACATTTATGTTGCTACTGCATTAGTTGACATGTACGCGAAATGTGGAAGCTTGGATAATGCCTTTAGAGTTTTTTATGACATGCCTTGGAAAAATGAGGTCTCTTGGAATGCCATGATATCTGCTCTTGCTTTCCATGGCCAAGCTCAAGAAGCTTTGGCATTGTTCAAATCCATGACCAATGAGGGTGGAGCTGCTTCCCCCAATGACATCACATTTGTAGGAGTACTTTCTGCTTGTGTGCACGCAGGATTAGTTGATGAAGGACGTCGGTTGTTTCACATGATGAGCTCGTCATTTGGATTGGTGCCGAAAATTGAGCATTACTCTTGTATGGTCGACCTTTTGTCACGAGCGGGACATCTGGAAGAAGCTTGGGATTTTGTCCAGAAGATGCCCGAAAAACCAGATGAAGTCATTCTTGGAGCACTGCTTGGCGCTTGTCAAAAGCGCAAGAACATTGACATTAGTGAGCGTGTAATGAAACTACTCCTCCAGTTGGAACCTTCAAATTCTGGAAATTACGTAATCTCATCGAGATTATATGCAAATTTGAGAAGATGGGATGACTCAGCCAGGATGAGAATGTTGATGAAGCAAAAGGGTGTTTCTAAGACTCCTGGTTGCAGCTGGATTGATATCAATTCACAACTTCATGAGTTTCATGCTGGCGATGTTTTGCACCAAGAGTGGACTGAAATCCATCAAATCCTAGACTTATTGATTGATGACTTGAGGAGGGAAGGCTATATTCCTAATGCCAGCCTTCTTTAG

mRNA sequence

ATGCTGAGAATAAAAGCTTCTCCGCATCTCATTTCCCGCTATCTCAATTTCGACAAAACAAATTCAAAACCAAATCCCAATCGTCAAGCTCTTTCCGAAAAGCTCATCGCCTTCATACAACAATGTGTAAGCATCAAACCATTGAAACAAATTCACACCCAGATGATTACGAACTCAATTCACAAACCCAATTCGTTTCTCTACAAGATCGTCGACCTCAAAGATTTCGCCTATGCCTCGGATTTCTTCTCCACCATTCTCGAGCCCACCCAGTACTCTTTCAATGTCATGATTCGTGGCCTCTCGACAACTTGGAATAAGTCTTCTCTTGCCCTTGAATTCTATTCTCGAATGAAATTTCTGGGTTTGAAACCCAATAAACTCACCTACCCATTTCTGTTTATAGCGTGTTCGAATCTTTTGGCTGTTGAAAATGGGCGGGTGGGTCATTGTTCTGTGATTAAACGTGGGTTGGACGAGGATGGTCATGTGAGTCATTCTTTGATTACGATGTATGCCCGGTGTGGGCAAGTGGGTGATGCCCGGAAGGTGTTTGATGAAATTCCTGAGAAGGATTTGGTTTCGTGGAACTCTATGATTTCGGGTTACTCGAAGATGAGGCATGCTGGTGAGGCTGTGGGTTTGTTTAGAGAGATGATGGAAGCTGGGTTTCAGCCCAATGAGATGACTTTAGTTAGTGTCTTGGGGGCGTGTGGAGAGCTGGGGGATTTGAAACTTGGTACTTGGGTGGAGGAGTTTGTGGTGGAGAATAAGATGGTGTTGAATTCTTTTATGGGATCTGCATTGATCCATATGTATGGAAAGTGTGGTGATTTAGTGTCAGCAAGGAGGATTTTTGATTCTATGAAGAAGAAAGATAAAGTTACTTGGAATGCCATGATTACAGGGCAAGTGAATGACCACCTTCTCTTTGAACCCATACTTAGCAATATTAATGGGATGTCAGAGGAAGCTATTAAATTGTTTCAAGACATGAGAATGAGCAGTACAGCTCCAGATCAAATCACATTGATAGGAATACTTTCTGCCTGTGCCTCAATTGGAGCCCTTGACTTGGGGAAGCAAGTAGAGATTTATGCCTCAGAAAGAGGCTTTCGAGACGACATTTATGTTGCTACTGCATTAGTTGACATGTACGCGAAATGTGGAAGCTTGGATAATGCCTTTAGAGTTTTTTATGACATGCCTTGGAAAAATGAGGTCTCTTGGAATGCCATGATATCTGCTCTTGCTTTCCATGGCCAAGCTCAAGAAGCTTTGGCATTGTTCAAATCCATGACCAATGAGGGTGGAGCTGCTTCCCCCAATGACATCACATTTGTAGGAGTACTTTCTGCTTGTGTGCACGCAGGATTAGTTGATGAAGGACGTCGGTTGTTTCACATGATGAGCTCGTCATTTGGATTGGTGCCGAAAATTGAGCATTACTCTTGTATGGTCGACCTTTTGTCACGAGCGGGACATCTGGAAGAAGCTTGGGATTTTGTCCAGAAGATGCCCGAAAAACCAGATGAAGTCATTCTTGGAGCACTGCTTGGCGCTTGTCAAAAGCGCAAGAACATTGACATTAGTGAGCGTGTAATGAAACTACTCCTCCAGTTGGAACCTTCAAATTCTGGAAATTACGTAATCTCATCGAGATTATATGCAAATTTGAGAAGATGGGATGACTCAGCCAGGATGAGAATGTTGATGAAGCAAAAGGGTGTTTCTAAGACTCCTGGTTGCAGCTGGATTGATATCAATTCACAACTTCATGAGTTTCATGCTGGCGATGTTTTGCACCAAGAGTGGACTGAAATCCATCAAATCCTAGACTTATTGATTGATGACTTGAGGAGGGAAGGCTATATTCCTAATGCCAGCCTTCTTTAG

Coding sequence (CDS)

ATGCTGAGAATAAAAGCTTCTCCGCATCTCATTTCCCGCTATCTCAATTTCGACAAAACAAATTCAAAACCAAATCCCAATCGTCAAGCTCTTTCCGAAAAGCTCATCGCCTTCATACAACAATGTGTAAGCATCAAACCATTGAAACAAATTCACACCCAGATGATTACGAACTCAATTCACAAACCCAATTCGTTTCTCTACAAGATCGTCGACCTCAAAGATTTCGCCTATGCCTCGGATTTCTTCTCCACCATTCTCGAGCCCACCCAGTACTCTTTCAATGTCATGATTCGTGGCCTCTCGACAACTTGGAATAAGTCTTCTCTTGCCCTTGAATTCTATTCTCGAATGAAATTTCTGGGTTTGAAACCCAATAAACTCACCTACCCATTTCTGTTTATAGCGTGTTCGAATCTTTTGGCTGTTGAAAATGGGCGGGTGGGTCATTGTTCTGTGATTAAACGTGGGTTGGACGAGGATGGTCATGTGAGTCATTCTTTGATTACGATGTATGCCCGGTGTGGGCAAGTGGGTGATGCCCGGAAGGTGTTTGATGAAATTCCTGAGAAGGATTTGGTTTCGTGGAACTCTATGATTTCGGGTTACTCGAAGATGAGGCATGCTGGTGAGGCTGTGGGTTTGTTTAGAGAGATGATGGAAGCTGGGTTTCAGCCCAATGAGATGACTTTAGTTAGTGTCTTGGGGGCGTGTGGAGAGCTGGGGGATTTGAAACTTGGTACTTGGGTGGAGGAGTTTGTGGTGGAGAATAAGATGGTGTTGAATTCTTTTATGGGATCTGCATTGATCCATATGTATGGAAAGTGTGGTGATTTAGTGTCAGCAAGGAGGATTTTTGATTCTATGAAGAAGAAAGATAAAGTTACTTGGAATGCCATGATTACAGGGCAAGTGAATGACCACCTTCTCTTTGAACCCATACTTAGCAATATTAATGGGATGTCAGAGGAAGCTATTAAATTGTTTCAAGACATGAGAATGAGCAGTACAGCTCCAGATCAAATCACATTGATAGGAATACTTTCTGCCTGTGCCTCAATTGGAGCCCTTGACTTGGGGAAGCAAGTAGAGATTTATGCCTCAGAAAGAGGCTTTCGAGACGACATTTATGTTGCTACTGCATTAGTTGACATGTACGCGAAATGTGGAAGCTTGGATAATGCCTTTAGAGTTTTTTATGACATGCCTTGGAAAAATGAGGTCTCTTGGAATGCCATGATATCTGCTCTTGCTTTCCATGGCCAAGCTCAAGAAGCTTTGGCATTGTTCAAATCCATGACCAATGAGGGTGGAGCTGCTTCCCCCAATGACATCACATTTGTAGGAGTACTTTCTGCTTGTGTGCACGCAGGATTAGTTGATGAAGGACGTCGGTTGTTTCACATGATGAGCTCGTCATTTGGATTGGTGCCGAAAATTGAGCATTACTCTTGTATGGTCGACCTTTTGTCACGAGCGGGACATCTGGAAGAAGCTTGGGATTTTGTCCAGAAGATGCCCGAAAAACCAGATGAAGTCATTCTTGGAGCACTGCTTGGCGCTTGTCAAAAGCGCAAGAACATTGACATTAGTGAGCGTGTAATGAAACTACTCCTCCAGTTGGAACCTTCAAATTCTGGAAATTACGTAATCTCATCGAGATTATATGCAAATTTGAGAAGATGGGATGACTCAGCCAGGATGAGAATGTTGATGAAGCAAAAGGGTGTTTCTAAGACTCCTGGTTGCAGCTGGATTGATATCAATTCACAACTTCATGAGTTTCATGCTGGCGATGTTTTGCACCAAGAGTGGACTGAAATCCATCAAATCCTAGACTTATTGATTGATGACTTGAGGAGGGAAGGCTATATTCCTAATGCCAGCCTTCTTTAG

Protein sequence

MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSIHKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGDARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWTEIHQILDLLIDDLRREGYIPNASLL
Homology
BLAST of Clc11G13100 vs. NCBI nr
Match: XP_038889591.1 (pentatricopeptide repeat-containing protein At2g34400 [Benincasa hispida])

HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 587/631 (93.03%), Postives = 600/631 (95.09%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIKASPHLISRY NF+KTNSKP+PNRQALSEKL +F+QQCVSIK LKQIHTQM+TNSI
Sbjct: 1   MLRIKASPHLISRYFNFNKTNSKPSPNRQALSEKLNSFLQQCVSIKQLKQIHTQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYKIVDLKDFAY+ DFFS I+EPT+YSFNVMIRGL+ TWNKSSLALE Y RMKF
Sbjct: 61  HKPNSFLYKIVDLKDFAYSLDFFSKIVEPTEYSFNVMIRGLAKTWNKSSLALELYYRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSW+SMISGYSKMRHAGEAVGLFREMMEAGFQPNEM LVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWSSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMALVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMS+EAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSDEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG RDDIYVATALVDMYAKCGSLDNAFRVFY MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLRDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQEALALFKSM NEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI
Sbjct: 421 GQAQEALALFKSMINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKNIDISERVMKLLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN SLL
Sbjct: 601 LHQEWIEIRQILDLLIDDLRREGYIPNISLL 619

BLAST of Clc11G13100 vs. NCBI nr
Match: XP_022929625.1 (pentatricopeptide repeat-containing protein At2g34400 [Cucurbita moschata])

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 572/631 (90.65%), Postives = 597/631 (94.61%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIK+SPHLISRYLNFDKT+SKPNPNRQA SEKL+ F+QQCVSIK LKQIH QM+TNSI
Sbjct: 1   MLRIKSSPHLISRYLNFDKTHSKPNPNRQAFSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYK+VDLKDFAYASDFFS ILEPT+Y+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGH SVIKRGLDEDGHVSHSLITMYARCG+VGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVV+N+MVLNS+MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG RD+IYV+TALVDMYAKCGSLDNAFRVF  MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLRDNIYVSTALVDMYAKCGSLDNAFRVFDVMPQKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQ+ALALF+SM  EGGAASPNDITFVGVLSACVHAGLVDEGRR FHMMSSSFGLVPKI
Sbjct: 421 GQAQKALALFESMIKEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKN++ISERVMKLLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN +LL
Sbjct: 601 LHQEWIEIQQILDLLIDDLRREGYIPNTTLL 619

BLAST of Clc11G13100 vs. NCBI nr
Match: XP_023521362.1 (pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp. pepo] >XP_023545668.1 pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1158.3 bits (2995), Expect = 0.0e+00
Identity = 572/631 (90.65%), Postives = 598/631 (94.77%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIK+SPHLISRYLNFDKT+SKPNPNRQALSEKL+ F+QQCVSIK LKQIH QM+TNSI
Sbjct: 1   MLRIKSSPHLISRYLNFDKTHSKPNPNRQALSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYK+VDLKDFAYASDFFS ILEPT+Y+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYTFNVMIRGLSTTWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGH SVIKRGLDEDGHVSHSLITMYARCG+VGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVV+N+MVLNS+MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG +D+IYV+TALVDMYAKCGSLDNAFRVF  MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLQDNIYVSTALVDMYAKCGSLDNAFRVFDIMPRKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQ+ALALFKSM NEGG ASPNDITFVGVLSACVHAGLVDEGRR FHMMSSSFGLVPKI
Sbjct: 421 GQAQKALALFKSMINEGGDASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKN++ISERVM+LLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMELLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN +LL
Sbjct: 601 LHQEWIEIQQILDLLIDDLRREGYIPNTTLL 619

BLAST of Clc11G13100 vs. NCBI nr
Match: KAG7029836.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1157.5 bits (2993), Expect = 0.0e+00
Identity = 572/631 (90.65%), Postives = 597/631 (94.61%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIK+SPHLISRYLNFDKT+SKPNPNRQA SEKL+ F+QQCVSIK LKQIH QM+TNSI
Sbjct: 1   MLRIKSSPHLISRYLNFDKTHSKPNPNRQAFSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYK+VDLKDFAYAS FFS ILEPT+Y+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKVVDLKDFAYASAFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGH SVIKRGLDEDGHVSHSLITMYARCG+VGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVV+N+MVLNS+MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITGQ              NGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLG
Sbjct: 301 ITGQ--------------NGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG RD+IYV+TALVDMYAKCGSLDNAFRVF  MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLRDNIYVSTALVDMYAKCGSLDNAFRVFDVMPQKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQ+ALALF+SM  EGGAASPNDITFVGVLSACVHAGLVDEGRR FHMMSSSFGLVPKI
Sbjct: 421 GQAQKALALFESMIKEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKN++ISERVMKLLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN +LL
Sbjct: 601 LHQEWIEIQQILDLLIDDLRREGYIPNTTLL 617

BLAST of Clc11G13100 vs. NCBI nr
Match: XP_022997564.1 (pentatricopeptide repeat-containing protein At2g34400 [Cucurbita maxima])

HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 568/631 (90.02%), Postives = 598/631 (94.77%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIK+SPHLISRYLNFDKT+SKPNPNRQALSEKL+ F+QQC+SIK +KQIH QM+TNSI
Sbjct: 1   MLRIKSSPHLISRYLNFDKTHSKPNPNRQALSEKLVTFLQQCLSIKQMKQIHNQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYK+VDLKDFAYASDFFS ILEPT+Y+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGH SVIKRGLDEDGHVSHSLITMYARCG+VGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLF +MM+AGF+PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFSDMMQAGFEPNEMTLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFV++N+MVLNS+MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVMDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG RD+IYV+TALVDMY+KCGSLDNAFRVF  MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLRDNIYVSTALVDMYSKCGSLDNAFRVFDVMPRKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQ+A+ALF SM NEGGAASPNDITFVGVLSACVHAGLVDEGRR FHMMSSSFGLVPKI
Sbjct: 421 GQAQKAMALFNSMLNEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKN++ISERVMKLLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN +LL
Sbjct: 601 LHQEWIEIQQILDLLIDDLRREGYIPNTTLL 619

BLAST of Clc11G13100 vs. ExPASy Swiss-Prot
Match: O64705 (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2)

HSP 1 Score: 652.9 bits (1683), Expect = 3.7e-186
Identity = 331/625 (52.96%), Postives = 433/625 (69.28%), Query Frame = 0

Query: 4   IKASPHLISRYLNFDKTNSK--PNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSIH 63
           IK      S Y  F K   +      R  L    +  +++C+S+  L+QI  QM+ +S+ 
Sbjct: 7   IKPEKLAFSIYRQFPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVE 66

Query: 64  KPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFL 123
           KPN  + K V+L DF Y+S  FS   EP  YSFN MIRGL+ TWN    AL  Y RMKF 
Sbjct: 67  KPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS 126

Query: 124 GLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGDA 183
           GLKP+K TY F+FIAC+ L  +  GR  H S+ K GL+ D H++HSLI MYA+CGQVG A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186

Query: 184 RKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGEL 243
           RK+FDEI E+D VSWNSMISGYS+  +A +A+ LFR+M E GF+P+E TLVS+LGAC  L
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246

Query: 244 GDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 303
           GDL+ G  +EE  +  K+ L++F+GS LI MYGKCGDL SARR+F+ M KKD+V W AMI
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306

Query: 304 TGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK 363
           T            + + NG S EA KLF +M  +  +PD  TL  +LSAC S+GAL+LGK
Sbjct: 307 T------------VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 366

Query: 364 QVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFHG 423
           Q+E +ASE   + +IYVAT LVDMY KCG ++ A RVF  MP KNE +WNAMI+A A  G
Sbjct: 367 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 426

Query: 424 QAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIE 483
            A+EAL LF  M     +  P+DITF+GVLSACVHAGLV +G R FH MSS FGLVPKIE
Sbjct: 427 HAKEALLLFDRM-----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIE 486

Query: 484 HYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQL 543
           HY+ ++DLLSRAG L+EAW+F+++ P KPDE++L A+LGAC KRK++ I E+ M++L+++
Sbjct: 487 HYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEM 546

Query: 544 -EPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAG-D 603
            E  N+GNYVISS + A+++ WD+SA+MR LM+ +GV KTPGCSWI+I  +L EF AG D
Sbjct: 547 KEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSD 606

Query: 604 VLHQEWTEIHQILDLLIDDLRREGY 625
            L     +   + DLL+++++RE Y
Sbjct: 607 YLQCGREDSGSLFDLLVEEMKRERY 614

BLAST of Clc11G13100 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.1e-120
Identity = 234/634 (36.91%), Postives = 367/634 (57.89%), Query Frame = 0

Query: 36  IAFIQQCVSIKPLKQIHTQMITNSIHKPNSFLYKIVD-------LKDFAYASDFFSTILE 95
           ++ +  C +++ L+ IH QMI   +H  N  L K+++        +   YA   F TI E
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 96  PTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVENGRV 155
           P    +N M RG + + +  S AL+ Y  M  LGL PN  T+PF+  +C+   A + G+ 
Sbjct: 97  PNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 156

Query: 156 GHCSVIKRGLDEDGHVSHSLITMYARCGQVGDARKV------------------------ 215
            H  V+K G D D +V  SLI+MY + G++ DA KV                        
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 216

Query: 216 -------FDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGA 275
                  FDEIP KD+VSWN+MISGY++  +  EA+ LF++MM+   +P+E T+V+V+ A
Sbjct: 217 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 276

Query: 276 CGELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW 335
           C + G ++LG  V  ++ ++    N  + +ALI +Y KCG+L +A  +F+ +  KD ++W
Sbjct: 277 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 336

Query: 336 NAMITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 395
           N +I G  + +L             +EA+ LFQ+M  S   P+ +T++ IL ACA +GA+
Sbjct: 337 NTLIGGYTHMNLY------------KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 396

Query: 396 DLGKQVEIYASER--GFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMIS 455
           D+G+ + +Y  +R  G  +   + T+L+DMYAKCG ++ A +VF  +  K+  SWNAMI 
Sbjct: 397 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 456

Query: 456 ALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG 515
             A HG+A  +  LF  M   G    P+DITFVG+LSAC H+G++D GR +F  M+  + 
Sbjct: 457 GFAMHGRADASFDLFSRMRKIG--IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYK 516

Query: 516 LVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVM 575
           + PK+EHY CM+DLL  +G  +EA + +  M  +PD VI  +LL AC+   N+++ E   
Sbjct: 517 MTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFA 576

Query: 576 KLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEF 630
           + L+++EP N G+YV+ S +YA+  RW++ A+ R L+  KG+ K PGCS I+I+S +HEF
Sbjct: 577 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 636

BLAST of Clc11G13100 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 4.3e-118
Identity = 230/650 (35.38%), Postives = 369/650 (56.77%), Query Frame = 0

Query: 6   ASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMI-TNSIHKPN 65
           A P  + R+ NF   N     N ++   + I+ I++CVS++ LKQ H  MI T +   P 
Sbjct: 7   AQPLSLPRHPNFSNPNQPTTNNERS---RHISLIERCVSLRQLKQTHGHMIRTGTFSDPY 66

Query: 66  SF--LYKIVDLKDFA---YASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMK 125
           S   L+ +  L  FA   YA   F  I +P  +++N +IR  ++  +       F   + 
Sbjct: 67  SASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 126

Query: 126 FLGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVG 185
                PNK T+PFL  A + + ++  G+  H   +K  +  D  V++SLI  Y  CG + 
Sbjct: 127 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 186

Query: 186 DARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACG 245
            A KVF  I EKD+VSWNSMI+G+ +     +A+ LF++M     + + +T+V VL AC 
Sbjct: 187 SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 246

Query: 246 ELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 305
           ++ +L+ G  V  ++ EN++ +N  + +A++ MY KCG +  A+R+FD+M++KD VTW  
Sbjct: 247 KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 306

Query: 306 MITGQV--NDHLLFEPILSNI-----------------NGMSEEAIKLFQDMRMSSTAP- 365
           M+ G     D+     +L+++                 NG   EA+ +F ++++      
Sbjct: 307 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 366

Query: 366 DQITLIGILSACASIGALDLGKQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVF 425
           +QITL+  LSACA +GAL+LG+ +  Y  + G R + +V +AL+ MY+KCG L+ +  VF
Sbjct: 367 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 426

Query: 426 YDMPWKNEVSWNAMISALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGL 485
             +  ++   W+AMI  LA HG   EA+ +F  M  +     PN +TF  V  AC H GL
Sbjct: 427 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACSHTGL 486

Query: 486 VDEGRRLFHMMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALL 545
           VDE   LFH M S++G+VP+ +HY+C+VD+L R+G+LE+A  F++ MP  P   + GALL
Sbjct: 487 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 546

Query: 546 GACQKRKNIDISERVMKLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSK 605
           GAC+   N++++E     LL+LEP N G +V+ S +YA L +W++ + +R  M+  G+ K
Sbjct: 547 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 606

Query: 606 TPGCSWIDINSQLHEFHAGDVLHQEWTEIHQILDLLIDDLRREGYIPNAS 630
            PGCS I+I+  +HEF +GD  H    +++  L  +++ L+  GY P  S
Sbjct: 607 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEIS 651

BLAST of Clc11G13100 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 3.8e-114
Identity = 238/642 (37.07%), Postives = 369/642 (57.48%), Query Frame = 0

Query: 3   RIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI-- 62
           R ++ PH   + +N++ T+S        L   L++ +++C  +  LKQI  QMI N +  
Sbjct: 30  RTRSLPHHRDKPINWNSTHS------FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLIL 89

Query: 63  -HKPNSFLYKIVDLKDFAYASDFFSTILE----PTQYSFNVMIRGLSTTWNKSSLALEFY 122
               +S L     L +  Y  D+   IL+    P  +S+NV IRG S + N     L  Y
Sbjct: 90  DPFASSRLIAFCALSESRYL-DYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL-LY 149

Query: 123 SRMKFLGL---KPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMY 182
            +M   G    +P+  TYP LF  C++L     G +    V+K  L+   HV ++ I M+
Sbjct: 150 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 209

Query: 183 ARCGQVGDARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLV 242
           A CG + +ARKVFDE P +DLVSWN +I+GY K+  A +A+ +++ M   G +P+++T++
Sbjct: 210 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 269

Query: 243 SVLGACGELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKK 302
            ++ +C  LGDL  G    E+V EN + +   + +AL+ M+ KCGD+  ARRIFD+++K+
Sbjct: 270 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 329

Query: 303 DKVTWNAMITGQVNDHLL------------FEPILSN--ING-----MSEEAIKLFQDMR 362
             V+W  MI+G     LL             + +L N  I G       ++A+ LFQ+M+
Sbjct: 330 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 389

Query: 363 MSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFRDDIYVATALVDMYAKCGSLD 422
            S+T PD+IT+I  LSAC+ +GALD+G  +  Y  +     ++ + T+LVDMYAKCG++ 
Sbjct: 390 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 449

Query: 423 NAFRVFYDMPWKNEVSWNAMISALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSA 482
            A  VF+ +  +N +++ A+I  LA HG A  A++ F  M + G   +P++ITF+G+LSA
Sbjct: 450 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG--IAPDEITFIGLLSA 509

Query: 483 CVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEV 542
           C H G++  GR  F  M S F L P+++HYS MVDLL RAG LEEA   ++ MP + D  
Sbjct: 510 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 569

Query: 543 ILGALLGACQKRKNIDISERVMKLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMK 602
           + GALL  C+   N+++ E+  K LL+L+PS+SG YV+   +Y     W+D+ R R +M 
Sbjct: 570 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 629

Query: 603 QKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWTEIHQILDLL 616
           ++GV K PGCS I++N  + EF   D    E  +I+  L  L
Sbjct: 630 ERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661

BLAST of Clc11G13100 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.1e-113
Identity = 229/622 (36.82%), Postives = 353/622 (56.75%), Query Frame = 0

Query: 27  NRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSIHKPNSFLYKIVDLKDFAYASDFFSTI 86
           N   +  +LI    +C S++  +Q+  +M   +I+  NS +  +  L     A   F ++
Sbjct: 53  NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112

Query: 87  LEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVENG 146
            E  Q ++N M+ G +   ++   AL +++ M   G   N+ ++  +  ACS L  +  G
Sbjct: 113 PERDQCTWNSMVSGFA-QHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 172

Query: 147 RVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGDARKVFDEIPEKDLVSWNSMISGYSKM 206
              H  + K     D ++  +L+ MY++CG V DA++VFDE+ ++++VSWNS+I+ + + 
Sbjct: 173 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 232

Query: 207 RHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLKLGTWVEEFVVENKMVLNS-FM 266
             A EA+ +F+ M+E+  +P+E+TL SV+ AC  L  +K+G  V   VV+N  + N   +
Sbjct: 233 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 292

Query: 267 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQV------NDHLLFEPILS-NI 326
            +A + MY KC  +  AR IFDSM  ++ +   +MI+G           L+F  +   N+
Sbjct: 293 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 352

Query: 327 ------------NGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIY 386
                       NG +EEA+ LF  ++  S  P   +   IL ACA +  L LG Q  ++
Sbjct: 353 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 412

Query: 387 ASERGFR------DDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 446
             + GF+      DDI+V  +L+DMY KCG ++  + VF  M  ++ VSWNAMI   A +
Sbjct: 413 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 472

Query: 447 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 506
           G   EAL LF+ M   G    P+ IT +GVLSAC HAG V+EGR  F  M+  FG+ P  
Sbjct: 473 GYGNEALELFREMLESG--EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 532

Query: 507 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 566
           +HY+CMVDLL RAG LEEA   +++MP +PD VI G+LL AC+  +NI + + V + LL+
Sbjct: 533 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 592

Query: 567 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 623
           +EPSNSG YV+ S +YA L +W+D   +R  M+++GV+K PGCSWI I    H F   D 
Sbjct: 593 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 652

BLAST of Clc11G13100 vs. ExPASy TrEMBL
Match: A0A6J1EUW3 (pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita moschata OX=3662 GN=LOC111436152 PE=4 SV=1)

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 572/631 (90.65%), Postives = 597/631 (94.61%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIK+SPHLISRYLNFDKT+SKPNPNRQA SEKL+ F+QQCVSIK LKQIH QM+TNSI
Sbjct: 1   MLRIKSSPHLISRYLNFDKTHSKPNPNRQAFSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYK+VDLKDFAYASDFFS ILEPT+Y+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGH SVIKRGLDEDGHVSHSLITMYARCG+VGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVV+N+MVLNS+MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG RD+IYV+TALVDMYAKCGSLDNAFRVF  MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLRDNIYVSTALVDMYAKCGSLDNAFRVFDVMPQKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQ+ALALF+SM  EGGAASPNDITFVGVLSACVHAGLVDEGRR FHMMSSSFGLVPKI
Sbjct: 421 GQAQKALALFESMIKEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKN++ISERVMKLLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN +LL
Sbjct: 601 LHQEWIEIQQILDLLIDDLRREGYIPNTTLL 619

BLAST of Clc11G13100 vs. ExPASy TrEMBL
Match: A0A6J1KBU4 (pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita maxima OX=3661 GN=LOC111492454 PE=4 SV=1)

HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 568/631 (90.02%), Postives = 598/631 (94.77%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIK+SPHLISRYLNFDKT+SKPNPNRQALSEKL+ F+QQC+SIK +KQIH QM+TNSI
Sbjct: 1   MLRIKSSPHLISRYLNFDKTHSKPNPNRQALSEKLVTFLQQCLSIKQMKQIHNQMLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYK+VDLKDFAYASDFFS ILEPT+Y+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNKLTYPFLFIACSNLLAVENGRVGH SVIKRGLDEDGHVSHSLITMYARCG+VGD
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLF +MM+AGF+PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFSDMMQAGFEPNEMTLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFV++N+MVLNS+MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVMDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERG RD+IYV+TALVDMY+KCGSLDNAFRVF  MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGLRDNIYVSTALVDMYSKCGSLDNAFRVFDVMPRKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQ+A+ALF SM NEGGAASPNDITFVGVLSACVHAGLVDEGRR FHMMSSSFGLVPKI
Sbjct: 421 GQAQKAMALFNSMLNEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDLLSRAGHLEEAWDFV+KMPEKPDEVILGALLGACQKRKN++ISERVMKLLL+
Sbjct: 481 EHYSCMVDLLSRAGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EI QILDLLIDDLRREGYIPN +LL
Sbjct: 601 LHQEWIEIQQILDLLIDDLRREGYIPNTTLL 619

BLAST of Clc11G13100 vs. ExPASy TrEMBL
Match: A0A0A0LMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060420 PE=4 SV=1)

HSP 1 Score: 1151.3 bits (2977), Expect = 0.0e+00
Identity = 569/631 (90.17%), Postives = 589/631 (93.34%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLR KASPHLISRYLN  K +SKPNPNRQALS+K  + +QQC+SIK LKQIH Q++TNSI
Sbjct: 1   MLRTKASPHLISRYLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           HKPNSFLYKI DLKDFAYAS FFS IL+PT+YSFNVMIRGLST WNKSSLALEFYSRMKF
Sbjct: 61  HKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPN LTYPFLFIACSNLLAVENGR+GHCSVI+RGLDEDGHVSHSLITMYARCG++GD
Sbjct: 121 LGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEI +KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEM+LVSVLGACGE
Sbjct: 181 ARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVVENKM LN FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQVEIYASERGF+DD+YV TALVDMYAKCGSLDNAFRVFY MP KNEVSWNAMISALAFH
Sbjct: 361 KQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQEALALFKSM NEGG  SPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI
Sbjct: 421 GQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDL SRAGHLEEAWDFV  MPEKPDEVILGALLGACQKRKNIDISERVMKLLL+
Sbjct: 481 EHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNSGNYVISS+LYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EIHQILDLLIDDLRREGYIPNA+LL
Sbjct: 601 LHQEWIEIHQILDLLIDDLRREGYIPNANLL 619

BLAST of Clc11G13100 vs. ExPASy TrEMBL
Match: A0A1S3BRJ2 (pentatricopeptide repeat-containing protein At2g34400 OS=Cucumis melo OX=3656 GN=LOC103492726 PE=4 SV=1)

HSP 1 Score: 1133.2 bits (2930), Expect = 0.0e+00
Identity = 562/631 (89.06%), Postives = 584/631 (92.55%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI 60
           MLRIKASPHLISRY N  K +SKPNPN QALSEKL + +QQC+SI+ LKQIHTQ++TNSI
Sbjct: 1   MLRIKASPHLISRYPNLQKPHSKPNPNPQALSEKLNSLLQQCLSIRQLKQIHTQLLTNSI 60

Query: 61  HKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
           +KPNSFLYKIVDLKDFAYAS FFS ILEPT+YSFNVMIRGLST WNK SLALEFYSRMKF
Sbjct: 61  YKPNSFLYKIVDLKDFAYASVFFSNILEPTEYSFNVMIRGLSTAWNKPSLALEFYSRMKF 120

Query: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
           LGLKPNK TYPFLFIACSNLLAV+NGR+GHCS IKRGLDEDGHVSHSLITMYARCG++GD
Sbjct: 121 LGLKPNKFTYPFLFIACSNLLAVDNGRMGHCSGIKRGLDEDGHVSHSLITMYARCGKMGD 180

Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
           ARKVFDEI +KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEM+LVSVLGACGE
Sbjct: 181 ARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGE 240

Query: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
           LGDLKLGTWVEEFVVENKM LNSFMGSALIHMYGKCGDLVSARRIFDS KKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVENKMPLNSFMGSALIHMYGKCGDLVSARRIFDSTKKKDKVTWNAM 300

Query: 301 ITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 360
           ITG               NGMSEEAIKLFQDMR+SSTAPDQITLIGILSACASIGALDLG
Sbjct: 301 ITGYAQ------------NGMSEEAIKLFQDMRVSSTAPDQITLIGILSACASIGALDLG 360

Query: 361 KQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 420
           KQ+EIYASERG+RDDIYV TALVDMYAKCGSLDNAFRVFY MP KNEVSWNAMISALAFH
Sbjct: 361 KQLEIYASERGYRDDIYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFH 420

Query: 421 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480
           GQAQEALALFKSM NEGG  SPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI
Sbjct: 421 GQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 480

Query: 481 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 540
           EHYSCMVDL SRAGHLEEAWDF+  MPEKPDEVILGALLGACQKRKNIDISERVM LLL+
Sbjct: 481 EHYSCMVDLFSRAGHLEEAWDFIMAMPEKPDEVILGALLGACQKRKNIDISERVMNLLLE 540

Query: 541 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600
           LEPSNS NYVISS+LYA L RWDDSA MRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV
Sbjct: 541 LEPSNSANYVISSKLYAKLGRWDDSAMMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 600

Query: 601 LHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           LHQEW EIHQILDLLIDDLRREGYIPNA+LL
Sbjct: 601 LHQEWIEIHQILDLLIDDLRREGYIPNANLL 619

BLAST of Clc11G13100 vs. ExPASy TrEMBL
Match: A0A6J1DIG6 (pentatricopeptide repeat-containing protein At2g34400 OS=Momordica charantia OX=3673 GN=LOC111020815 PE=4 SV=1)

HSP 1 Score: 1129.0 bits (2919), Expect = 0.0e+00
Identity = 565/633 (89.26%), Postives = 590/633 (93.21%), Query Frame = 0

Query: 1   MLRIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAF-IQQCVSIKPLKQIHTQMITNS 60
           MLRIKASPHLISRYLN +KTN  PNPNR+ALSEKL+AF +QQC+S++ LKQIHTQMITNS
Sbjct: 1   MLRIKASPHLISRYLNLEKTN--PNPNRRALSEKLLAFLLQQCLSLRQLKQIHTQMITNS 60

Query: 61  IHKPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMK 120
           IHKPNSFL+KI DLKDFAYASDFFS ILEPT+Y+FNVMIRGLSTTWNKSSLALE Y RMK
Sbjct: 61  IHKPNSFLFKIADLKDFAYASDFFSRILEPTEYAFNVMIRGLSTTWNKSSLALELYFRMK 120

Query: 121 FLGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVG 180
           FLGLKPNKLTYPFLFIACSNLLAVE GRVGH SV+KRG DEDGHVSHSLITMYARCG++G
Sbjct: 121 FLGLKPNKLTYPFLFIACSNLLAVEYGRVGHSSVVKRGFDEDGHVSHSLITMYARCGELG 180

Query: 181 DARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACG 240
           DARKVFDEIPE+DLVSWNSMISGYSKMR+A EAVGLFREMM AGF+PNEMTLVSVLGACG
Sbjct: 181 DARKVFDEIPERDLVSWNSMISGYSKMRYAAEAVGLFREMMGAGFEPNEMTLVSVLGACG 240

Query: 241 ELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 300
           ELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIF+SMKKKDKVTWNA
Sbjct: 241 ELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFESMKKKDKVTWNA 300

Query: 301 MITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDL 360
           MITG               NG+SEEAIKLFQDMRMSST PDQITLIG+LSACASIGALDL
Sbjct: 301 MITGYAQ------------NGLSEEAIKLFQDMRMSSTTPDQITLIGMLSACASIGALDL 360

Query: 361 GKQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAF 420
           GKQ EIYASERG RDDIYVATALVDMYAKCGSLDNAFRVF  MP KNEVSWNAMISALAF
Sbjct: 361 GKQAEIYASERGLRDDIYVATALVDMYAKCGSLDNAFRVFNGMPRKNEVSWNAMISALAF 420

Query: 421 HGQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 480
           HGQAQEALALFKSM  EGG+ASPNDITFVGVLSACVHAGLVDEGRRLFHMM SSF LVPK
Sbjct: 421 HGQAQEALALFKSMIKEGGSASPNDITFVGVLSACVHAGLVDEGRRLFHMMCSSFRLVPK 480

Query: 481 IEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLL 540
           IEHYSCMVDLLSRAGHLEEAWDF++KMPEKPDEVILGALLGACQKRKNIDISERVMKLLL
Sbjct: 481 IEHYSCMVDLLSRAGHLEEAWDFIEKMPEKPDEVILGALLGACQKRKNIDISERVMKLLL 540

Query: 541 QLEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHA-G 600
           +LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDI+SQLHEFHA G
Sbjct: 541 ELEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIDSQLHEFHAGG 600

Query: 601 DVLHQEWTEIHQILDLLIDDLRREGYIPNASLL 632
           DVLH EW EIHQIL+LLIDDLRREGYIPN SLL
Sbjct: 601 DVLHHEWIEIHQILNLLIDDLRREGYIPNTSLL 619

BLAST of Clc11G13100 vs. TAIR 10
Match: AT2G34400.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 652.9 bits (1683), Expect = 2.6e-187
Identity = 331/625 (52.96%), Postives = 433/625 (69.28%), Query Frame = 0

Query: 4   IKASPHLISRYLNFDKTNSK--PNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSIH 63
           IK      S Y  F K   +      R  L    +  +++C+S+  L+QI  QM+ +S+ 
Sbjct: 7   IKPEKLAFSIYRQFPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVE 66

Query: 64  KPNSFLYKIVDLKDFAYASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFL 123
           KPN  + K V+L DF Y+S  FS   EP  YSFN MIRGL+ TWN    AL  Y RMKF 
Sbjct: 67  KPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS 126

Query: 124 GLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGDA 183
           GLKP+K TY F+FIAC+ L  +  GR  H S+ K GL+ D H++HSLI MYA+CGQVG A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186

Query: 184 RKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGEL 243
           RK+FDEI E+D VSWNSMISGYS+  +A +A+ LFR+M E GF+P+E TLVS+LGAC  L
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246

Query: 244 GDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 303
           GDL+ G  +EE  +  K+ L++F+GS LI MYGKCGDL SARR+F+ M KKD+V W AMI
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306

Query: 304 TGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK 363
           T            + + NG S EA KLF +M  +  +PD  TL  +LSAC S+GAL+LGK
Sbjct: 307 T------------VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 366

Query: 364 QVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFHG 423
           Q+E +ASE   + +IYVAT LVDMY KCG ++ A RVF  MP KNE +WNAMI+A A  G
Sbjct: 367 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 426

Query: 424 QAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIE 483
            A+EAL LF  M     +  P+DITF+GVLSACVHAGLV +G R FH MSS FGLVPKIE
Sbjct: 427 HAKEALLLFDRM-----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIE 486

Query: 484 HYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQL 543
           HY+ ++DLLSRAG L+EAW+F+++ P KPDE++L A+LGAC KRK++ I E+ M++L+++
Sbjct: 487 HYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEM 546

Query: 544 -EPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAG-D 603
            E  N+GNYVISS + A+++ WD+SA+MR LM+ +GV KTPGCSWI+I  +L EF AG D
Sbjct: 547 KEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSD 606

Query: 604 VLHQEWTEIHQILDLLIDDLRREGY 625
            L     +   + DLL+++++RE Y
Sbjct: 607 YLQCGREDSGSLFDLLVEEMKRERY 614

BLAST of Clc11G13100 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 434.5 bits (1116), Expect = 1.5e-121
Identity = 234/634 (36.91%), Postives = 367/634 (57.89%), Query Frame = 0

Query: 36  IAFIQQCVSIKPLKQIHTQMITNSIHKPNSFLYKIVD-------LKDFAYASDFFSTILE 95
           ++ +  C +++ L+ IH QMI   +H  N  L K+++        +   YA   F TI E
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 96  PTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVENGRV 155
           P    +N M RG + + +  S AL+ Y  M  LGL PN  T+PF+  +C+   A + G+ 
Sbjct: 97  PNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 156

Query: 156 GHCSVIKRGLDEDGHVSHSLITMYARCGQVGDARKV------------------------ 215
            H  V+K G D D +V  SLI+MY + G++ DA KV                        
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 216

Query: 216 -------FDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGA 275
                  FDEIP KD+VSWN+MISGY++  +  EA+ LF++MM+   +P+E T+V+V+ A
Sbjct: 217 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 276

Query: 276 CGELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW 335
           C + G ++LG  V  ++ ++    N  + +ALI +Y KCG+L +A  +F+ +  KD ++W
Sbjct: 277 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 336

Query: 336 NAMITGQVNDHLLFEPILSNINGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 395
           N +I G  + +L             +EA+ LFQ+M  S   P+ +T++ IL ACA +GA+
Sbjct: 337 NTLIGGYTHMNLY------------KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 396

Query: 396 DLGKQVEIYASER--GFRDDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMIS 455
           D+G+ + +Y  +R  G  +   + T+L+DMYAKCG ++ A +VF  +  K+  SWNAMI 
Sbjct: 397 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 456

Query: 456 ALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG 515
             A HG+A  +  LF  M   G    P+DITFVG+LSAC H+G++D GR +F  M+  + 
Sbjct: 457 GFAMHGRADASFDLFSRMRKIG--IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYK 516

Query: 516 LVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVM 575
           + PK+EHY CM+DLL  +G  +EA + +  M  +PD VI  +LL AC+   N+++ E   
Sbjct: 517 MTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFA 576

Query: 576 KLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEF 630
           + L+++EP N G+YV+ S +YA+  RW++ A+ R L+  KG+ K PGCS I+I+S +HEF
Sbjct: 577 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 636

BLAST of Clc11G13100 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 426.8 bits (1096), Expect = 3.1e-119
Identity = 230/650 (35.38%), Postives = 369/650 (56.77%), Query Frame = 0

Query: 6   ASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMI-TNSIHKPN 65
           A P  + R+ NF   N     N ++   + I+ I++CVS++ LKQ H  MI T +   P 
Sbjct: 7   AQPLSLPRHPNFSNPNQPTTNNERS---RHISLIERCVSLRQLKQTHGHMIRTGTFSDPY 66

Query: 66  SF--LYKIVDLKDFA---YASDFFSTILEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMK 125
           S   L+ +  L  FA   YA   F  I +P  +++N +IR  ++  +       F   + 
Sbjct: 67  SASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 126

Query: 126 FLGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVG 185
                PNK T+PFL  A + + ++  G+  H   +K  +  D  V++SLI  Y  CG + 
Sbjct: 127 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 186

Query: 186 DARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACG 245
            A KVF  I EKD+VSWNSMI+G+ +     +A+ LF++M     + + +T+V VL AC 
Sbjct: 187 SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 246

Query: 246 ELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 305
           ++ +L+ G  V  ++ EN++ +N  + +A++ MY KCG +  A+R+FD+M++KD VTW  
Sbjct: 247 KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 306

Query: 306 MITGQV--NDHLLFEPILSNI-----------------NGMSEEAIKLFQDMRMSSTAP- 365
           M+ G     D+     +L+++                 NG   EA+ +F ++++      
Sbjct: 307 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 366

Query: 366 DQITLIGILSACASIGALDLGKQVEIYASERGFRDDIYVATALVDMYAKCGSLDNAFRVF 425
           +QITL+  LSACA +GAL+LG+ +  Y  + G R + +V +AL+ MY+KCG L+ +  VF
Sbjct: 367 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 426

Query: 426 YDMPWKNEVSWNAMISALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGL 485
             +  ++   W+AMI  LA HG   EA+ +F  M  +     PN +TF  V  AC H GL
Sbjct: 427 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACSHTGL 486

Query: 486 VDEGRRLFHMMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALL 545
           VDE   LFH M S++G+VP+ +HY+C+VD+L R+G+LE+A  F++ MP  P   + GALL
Sbjct: 487 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 546

Query: 546 GACQKRKNIDISERVMKLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSK 605
           GAC+   N++++E     LL+LEP N G +V+ S +YA L +W++ + +R  M+  G+ K
Sbjct: 547 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 606

Query: 606 TPGCSWIDINSQLHEFHAGDVLHQEWTEIHQILDLLIDDLRREGYIPNAS 630
            PGCS I+I+  +HEF +GD  H    +++  L  +++ L+  GY P  S
Sbjct: 607 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEIS 651

BLAST of Clc11G13100 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-115
Identity = 238/642 (37.07%), Postives = 369/642 (57.48%), Query Frame = 0

Query: 3   RIKASPHLISRYLNFDKTNSKPNPNRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSI-- 62
           R ++ PH   + +N++ T+S        L   L++ +++C  +  LKQI  QMI N +  
Sbjct: 30  RTRSLPHHRDKPINWNSTHS------FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLIL 89

Query: 63  -HKPNSFLYKIVDLKDFAYASDFFSTILE----PTQYSFNVMIRGLSTTWNKSSLALEFY 122
               +S L     L +  Y  D+   IL+    P  +S+NV IRG S + N     L  Y
Sbjct: 90  DPFASSRLIAFCALSESRYL-DYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL-LY 149

Query: 123 SRMKFLGL---KPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMY 182
            +M   G    +P+  TYP LF  C++L     G +    V+K  L+   HV ++ I M+
Sbjct: 150 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 209

Query: 183 ARCGQVGDARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLV 242
           A CG + +ARKVFDE P +DLVSWN +I+GY K+  A +A+ +++ M   G +P+++T++
Sbjct: 210 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 269

Query: 243 SVLGACGELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKK 302
            ++ +C  LGDL  G    E+V EN + +   + +AL+ M+ KCGD+  ARRIFD+++K+
Sbjct: 270 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 329

Query: 303 DKVTWNAMITGQVNDHLL------------FEPILSN--ING-----MSEEAIKLFQDMR 362
             V+W  MI+G     LL             + +L N  I G       ++A+ LFQ+M+
Sbjct: 330 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 389

Query: 363 MSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFRDDIYVATALVDMYAKCGSLD 422
            S+T PD+IT+I  LSAC+ +GALD+G  +  Y  +     ++ + T+LVDMYAKCG++ 
Sbjct: 390 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 449

Query: 423 NAFRVFYDMPWKNEVSWNAMISALAFHGQAQEALALFKSMTNEGGAASPNDITFVGVLSA 482
            A  VF+ +  +N +++ A+I  LA HG A  A++ F  M + G   +P++ITF+G+LSA
Sbjct: 450 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG--IAPDEITFIGLLSA 509

Query: 483 CVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEV 542
           C H G++  GR  F  M S F L P+++HYS MVDLL RAG LEEA   ++ MP + D  
Sbjct: 510 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 569

Query: 543 ILGALLGACQKRKNIDISERVMKLLLQLEPSNSGNYVISSRLYANLRRWDDSARMRMLMK 602
           + GALL  C+   N+++ E+  K LL+L+PS+SG YV+   +Y     W+D+ R R +M 
Sbjct: 570 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 629

Query: 603 QKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWTEIHQILDLL 616
           ++GV K PGCS I++N  + EF   D    E  +I+  L  L
Sbjct: 630 ERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661

BLAST of Clc11G13100 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 412.1 bits (1058), Expect = 7.8e-115
Identity = 229/622 (36.82%), Postives = 353/622 (56.75%), Query Frame = 0

Query: 27  NRQALSEKLIAFIQQCVSIKPLKQIHTQMITNSIHKPNSFLYKIVDLKDFAYASDFFSTI 86
           N   +  +LI    +C S++  +Q+  +M   +I+  NS +  +  L     A   F ++
Sbjct: 53  NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112

Query: 87  LEPTQYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVENG 146
            E  Q ++N M+ G +   ++   AL +++ M   G   N+ ++  +  ACS L  +  G
Sbjct: 113 PERDQCTWNSMVSGFA-QHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 172

Query: 147 RVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGDARKVFDEIPEKDLVSWNSMISGYSKM 206
              H  + K     D ++  +L+ MY++CG V DA++VFDE+ ++++VSWNS+I+ + + 
Sbjct: 173 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 232

Query: 207 RHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLKLGTWVEEFVVENKMVLNS-FM 266
             A EA+ +F+ M+E+  +P+E+TL SV+ AC  L  +K+G  V   VV+N  + N   +
Sbjct: 233 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 292

Query: 267 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQV------NDHLLFEPILS-NI 326
            +A + MY KC  +  AR IFDSM  ++ +   +MI+G           L+F  +   N+
Sbjct: 293 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 352

Query: 327 ------------NGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIY 386
                       NG +EEA+ LF  ++  S  P   +   IL ACA +  L LG Q  ++
Sbjct: 353 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 412

Query: 387 ASERGFR------DDIYVATALVDMYAKCGSLDNAFRVFYDMPWKNEVSWNAMISALAFH 446
             + GF+      DDI+V  +L+DMY KCG ++  + VF  M  ++ VSWNAMI   A +
Sbjct: 413 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 472

Query: 447 GQAQEALALFKSMTNEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 506
           G   EAL LF+ M   G    P+ IT +GVLSAC HAG V+EGR  F  M+  FG+ P  
Sbjct: 473 GYGNEALELFREMLESG--EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 532

Query: 507 EHYSCMVDLLSRAGHLEEAWDFVQKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLQ 566
           +HY+CMVDLL RAG LEEA   +++MP +PD VI G+LL AC+  +NI + + V + LL+
Sbjct: 533 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 592

Query: 567 LEPSNSGNYVISSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 623
           +EPSNSG YV+ S +YA L +W+D   +R  M+++GV+K PGCSWI I    H F   D 
Sbjct: 593 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 652

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889591.10.0e+0093.03pentatricopeptide repeat-containing protein At2g34400 [Benincasa hispida][more]
XP_022929625.10.0e+0090.65pentatricopeptide repeat-containing protein At2g34400 [Cucurbita moschata][more]
XP_023521362.10.0e+0090.65pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp... [more]
KAG7029836.10.0e+0090.65Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022997564.10.0e+0090.02pentatricopeptide repeat-containing protein At2g34400 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O647053.7e-18652.96Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX... [more]
Q9LN012.1e-12036.91Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823804.3e-11835.38Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SJZ33.8e-11437.07Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9SIT71.1e-11336.82Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1EUW30.0e+0090.65pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita moschata OX=3... [more]
A0A6J1KBU40.0e+0090.02pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita maxima OX=366... [more]
A0A0A0LMG00.0e+0090.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060420 PE=4 SV=1[more]
A0A1S3BRJ20.0e+0089.06pentatricopeptide repeat-containing protein At2g34400 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1DIG60.0e+0089.26pentatricopeptide repeat-containing protein At2g34400 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
AT2G34400.12.6e-18752.96Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G08070.11.5e-12136.91Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.13.1e-11935.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22410.12.7e-11537.07SLOW GROWTH 1 [more]
AT2G13600.17.8e-11536.82Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 471..542
e-value: 3.7E-6
score: 28.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 29..150
e-value: 2.5E-6
score: 28.9
coord: 248..366
e-value: 6.0E-20
score: 73.3
coord: 151..247
e-value: 3.0E-23
score: 84.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 367..470
e-value: 8.0E-24
score: 86.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 445..478
e-value: 1.2E-4
score: 20.0
coord: 483..508
e-value: 4.0E-4
score: 18.4
coord: 194..228
e-value: 7.9E-10
score: 36.3
coord: 268..293
e-value: 4.7E-4
score: 18.2
coord: 408..437
e-value: 6.8E-4
score: 17.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 89..137
e-value: 2.0E-7
score: 31.1
coord: 292..352
e-value: 2.5E-7
score: 30.8
coord: 191..238
e-value: 1.8E-10
score: 40.8
coord: 405..455
e-value: 5.0E-9
score: 36.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 482..509
e-value: 0.0018
score: 18.4
coord: 380..404
e-value: 0.0093
score: 16.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 262..296
score: 8.780059
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 192..226
score: 13.318037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 479..509
score: 8.692369
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..125
score: 9.382931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 406..440
score: 10.522905
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 48..189
coord: 290..629
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 190..303
NoneNo IPR availablePANTHERPTHR47926:SF54SUBFAMILY NOT NAMEDcoord: 48..189
coord: 290..629
NoneNo IPR availablePANTHERPTHR47926:SF54SUBFAMILY NOT NAMEDcoord: 190..303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G13100.2Clc11G13100.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding