Clc11G09660 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G09660
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	YELLOW STRIPE like 7
Location	ClcChr11: 12462462 .. 12465607 (+)
RNA-Seq Expression	Clc11G09660
Synteny	Clc11G09660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTCCCCATCTCCGTCCCTGTGGAGATTTGTAATCCTCATCCCTGTCTCAAATTCTCGTTTTGGGAGGTGTGGGCTAGAGTCGGGAATCTCTGTTTGGGGTTCTCATTTATATTTTTATTTTAATTATTTTTTATTTAAAATCAATTAAACTTTATTAGATAATAAATTAGTATTATCAATGTTTTATTTATTTAAATTAATAACTAAAAAACATTTTAGATTTTTGTAAATTTAATAAAAAGTTAAACAATTATATTATGAAATGAAATTTTTAAAAAAAGTTTTAAAAAAATTAACAAAACAGTAGTTCCCTTAAGAAGTTACTGCAATATAAAAATATATTAAATTATTATTATTATTATTATTATTATTATTATTAAAAAAAGAATATATATATATATGGGACGGAATCGGGATCGGTGACCCGTTTTGACCCCCATCCCCGGTCAAACTAGGAATTCCCCACCCCGATCGAGACAGGTACCGCAAAGATTCTTTGACCCCACCAGGATATTATATTATTAAAAATATAAAATTTATAACATGTGCAAATAGTTTTTAGGTTAGTTGGGTGAGAATTGACATAACTATGGAATTAGTTATTATTATTTACCACTGTTAACTAAACTCATTTACTTATTTATTATAAAATTACCACTAATTTAACCCTAAGGAACACAGTGTGTAAGAGTAAGGCTAAGTTATAGAAAATATTTTCAACTTTATACTTTGTTTCAACAATACTCTCAAACTTTGACAAATTTTATTAATACAGTTTGAATTTTAATAAAAGTTAAAAATATTTTTATTGTTAGTATATGGATGAAAAATGTTAATCTACACCCTTGAATTTTATACCTCGTCTCAATGATACTTTTGAATTTTAAAATTGTATTAATATCCTTAACATTAGTGAAAAAAAAAATGTAAATAAAGTGTCTTTGTTATGAGTATATGAACGTAACCAATTTATTTGTACCTTATTACCGCTTGCCATTTCGTCTCTTTGTTCTTCGATAACCAATGGCCTAACATTTTTCCATTTCCTCTCTTTTTCCCTTTTCTTCCCTATCCTCTTAACCCTCTTCTTCCATTCTCCGATCTTCAAAACTACCTCATTTAATCAACGTACATAGGCTATAGCAAGAAGAAATTAGAATAATATGATTGCCAAGTGACCTTAGATCTTACATTTTTTACAATGTTGTACATTAGTATTTGAGTGAGTGTTAATATATTTGAGATTTAATACACATAAAGAAAGATAAGTAAAGAATTTAGGTCATAATTTTGAGAACAACTAGTGGGAGTGAATGACAAATACATATGCATTGCGAGACTTGAGAAGATAGAAGATTTTGTTCATCCTTTTGCATTTCAAATTAGTTTATTTATTATGGTCAGTTTTGAAGATTGGTGACTAAAGGTGATATTCTTTGTTGGCCTTTTTTTTGTATTTGATGATTCATCGTTTTGTTGATTTTTTAGAGGAGATTTTGGGGTTTTTGGATTTTTGGGATCTGATACTTTAACTTCAAGTTTTTGATTGTTTGGTGCCGAGAAAATTAGTGTAAGAGTTAGAAAAATGGGGAAAAAATGAGAGTATGTATATGAGTTGTTTCAAATTTGTTCTTTCTCAACTCAAGATTTCAATGTTGATTGTTTGAGTGTTTAAATTTTTTTATATTTATGATTAGGCATGCTCTTAAATGAAATGGAAGAAAGAGATTAGGAAATACTTAGAAAGAAAATAAAAAGTGTTAGACCCATAGTTTAAAGTAGAGCAGAGAAAGGAAATGGAAGAGGGAGGTGATGGATTGTGTAAATAAATGGTTGCCCATATATTAGCAGTCAAGATATTTTTTAACTTTTTTTTAAAAGAGTATTAATATAACTTTTAAAAGTTCACAGGTGTGGATCAATAATTTCTGTCCATTTTGTCCATATACTAACTATTTATATTTTGAGAAGTTTAAGGATGATATTAATACAACTTTTGAAAGTTATATGAGATATCATTAAAATATAGTACAAAGTTGAGGTATTTCTTATAATTTAGCCTTAGAGTAACGTATTGTAGTAAACCTAGATAGTACAAACAATAAACTAGACCGTAGTAAATTTGAGTTTACAAAACTACCAACCGCAGGTTCAATTAGTTTAATTCCTACTCATTTAAAAATAGTAAATCAAATGCCCCCAAACTAATTCATCATTCATTAATAAGTAGGAGCTTGTAAGTTTTTTGCAATCAAATATTTGATATAGTTTAGGGTTGTTTTCAAATATAGAAAAATGAACCAAAATTTTGACAAATATAACAAAATATCATTATCTATCATAATCTATAGATAGTAAAATTTTACTATTATTTGTAAATATTTTTAATAGTTTTTTCATTTTAAATAAGTTCTATAGTTTAATTTGGTGCATTCGTTACATTAGAGGAAGCAAGTGAGAAGGCTTCGAAAGGCTTTTTCCTTCAGCTTCTTGTGGGGCTTCTTCCAATGGTTCTTCACTGCCGGAGATGGGTGTGGATTTAGCAATTCCCTACGTTTGGCCTCAAAGCTTACAAAAACAAGTACTTTTTTATGCCCCTTCTTATCAATTAATACACTGTTCAAGTTCGATAGGTTCAGGGTATGTTGGGGTAGGAATGATTTGTCCGTACACCATGAACATACCTGTGTTGCTTGGAGCAATTCTTACAAGGCATTTGATGACATTGGACAGCCTGAAAGTGCTTATCCAGCGCCTTATGCAACTGTTTACCATAACATGGCTCTTCTCGCACTCAAAGGCTTCTCTAGTCTCCCAAAGAACTGTCTTTCCCTATGCACTGTGTTCTCTGCAGCAGCCATTTTGATAAATTTGATAAGAGACTTAACAGGGAAGAAGGTAAGTCAGTATGTTCCAATACCTACGGCAATGGCAATTCCACTCTATATGGGCCCATATTTCGCCATTGACATGTGCCTTGGAAGCTTCATATTGTTTGTGTGGAGAAAGAACAACAAGGCCAAGGCCGAGGCCGAGGCGTTTGCACCTGCAGTGGCGGCTGGTCTGATATGTGGAGATGGATTATGGACATTGCCTAGCTCCATCTTGCTGTGGCTGGAGTTAGGCCTTCCATTTGCATGA

mRNA sequence

ATGCACTCCCCATCTCCGTCCCTGTGGAGATTTGTAATCCTCATCCCTGTCTCAAATTCTCGTTTTGGGAGGAATGATTTGTCCGTACACCATGAACATACCTGTGTTGCTTGGAGCAATTCTTACAAGGCATTTGATGACATTGGACAGCCTGAAAGTGCTTATCCAGCGCCTTATGCAACTGTTTACCATAACATGGCTCTTCTCGCACTCAAAGGCTTCTCTAGTCTCCCAAAGAACTGTCTTTCCCTATGCACTGTGTTCTCTGCAGCAGCCATTTTGATAAATTTGATAAGAGACTTAACAGGGAAGAAGGTAAGTCAGTATGTTCCAATACCTACGGCAATGGCAATTCCACTCTATATGGGCCCATATTTCGCCATTGACATGTGCCTTGGAAGCTTCATATTGTTTGTGTGGAGAAAGAACAACAAGGCCAAGGCCGAGGCCGAGGCGTTTGCACCTGCAGTGGCGGCTGGTCTGATATGTGGAGATGGATTATGGACATTGCCTAGCTCCATCTTGCTGTGGCTGGAGTTAGGCCTTCCATTTGCATGA

Coding sequence (CDS)

ATGCACTCCCCATCTCCGTCCCTGTGGAGATTTGTAATCCTCATCCCTGTCTCAAATTCTCGTTTTGGGAGGAATGATTTGTCCGTACACCATGAACATACCTGTGTTGCTTGGAGCAATTCTTACAAGGCATTTGATGACATTGGACAGCCTGAAAGTGCTTATCCAGCGCCTTATGCAACTGTTTACCATAACATGGCTCTTCTCGCACTCAAAGGCTTCTCTAGTCTCCCAAAGAACTGTCTTTCCCTATGCACTGTGTTCTCTGCAGCAGCCATTTTGATAAATTTGATAAGAGACTTAACAGGGAAGAAGGTAAGTCAGTATGTTCCAATACCTACGGCAATGGCAATTCCACTCTATATGGGCCCATATTTCGCCATTGACATGTGCCTTGGAAGCTTCATATTGTTTGTGTGGAGAAAGAACAACAAGGCCAAGGCCGAGGCCGAGGCGTTTGCACCTGCAGTGGCGGCTGGTCTGATATGTGGAGATGGATTATGGACATTGCCTAGCTCCATCTTGCTGTGGCTGGAGTTAGGCCTTCCATTTGCATGA

Protein sequence

MHSPSPSLWRFVILIPVSNSRFGRNDLSVHHEHTCVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAILINLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFAPAVAAGLICGDGLWTLPSSILLWLELGLPFA

Homology

[Close]

BLAST of Clc11G09660 vs. NCBI nr
Match: TYK06667.1 (putative metal-nicotianamine transporter YSL7 [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 5.9e-57
Identity = 116/141 (82.27%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQPESAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 540 CVFWL-FYKAFDDLGQPESAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 599

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKKVSQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K NKAK  AEAFA
Sbjct: 600 INLIRDLSGKKVSQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKINKAK--AEAFA 659

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPSSIL
Sbjct: 660 PAVASGLICGDGIWTLPSSIL 677

[Close]

BLAST of Clc11G09660 vs. NCBI nr
Match: XP_038885059.1 (probable metal-nicotianamine transporter YSL7 [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-56
Identity = 115/141 (81.56%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQPESAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 538 CVFWL-FYKAFDDLGQPESAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 597

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKK SQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K NKAK  AEAFA
Sbjct: 598 INLIRDLSGKKASQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKINKAK--AEAFA 657

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPSSIL
Sbjct: 658 PAVASGLICGDGIWTLPSSIL 675

[Close]

BLAST of Clc11G09660 vs. NCBI nr
Match: TYK06671.1 (putative metal-nicotianamine transporter YSL8 [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQPESAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 369 CVFWL-FYKAFDDLGQPESAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 428

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKKVSQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K N  KA A+AFA
Sbjct: 429 INLIRDLSGKKVSQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKIN--KANADAFA 488

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPS+IL
Sbjct: 489 PAVASGLICGDGIWTLPSTIL 506

[Close]

BLAST of Clc11G09660 vs. NCBI nr
Match: XP_004138807.1 (probable metal-nicotianamine transporter YSL7 [Cucumis sativus] >KGN63124.1 hypothetical protein Csa_022200 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 113/141 (80.14%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQ  SAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 541 CVFWL-FYKAFDDLGQLGSAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 600

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKKVSQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K NKAK  A+AFA
Sbjct: 601 INLIRDLSGKKVSQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKINKAK--ADAFA 660

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPSSIL
Sbjct: 661 PAVASGLICGDGIWTLPSSIL 678

[Close]

BLAST of Clc11G09660 vs. NCBI nr
Match: XP_004138639.1 (probable metal-nicotianamine transporter YSL8 isoform X1 [Cucumis sativus] >KAE8652248.1 hypothetical protein Csa_022424 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 2.8e-54
Identity = 112/141 (79.43%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDDIGQPESAYPAPYATVY NMALLA++G SSLPKNCL L  +F AAAI+
Sbjct: 513 CVFWL-FYKAFDDIGQPESAYPAPYATVYRNMALLAVEGVSSLPKNCLYLSYLFFAAAIV 572

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           +NLIRDL  KKVSQY+PIPTAMAIP Y+GPYFAIDMCLGS ILFVW K NKAK  A+AFA
Sbjct: 573 LNLIRDLLEKKVSQYIPIPTAMAIPFYIGPYFAIDMCLGSLILFVWEKINKAK--ADAFA 632

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLP SIL
Sbjct: 633 PAVASGLICGDGIWTLPRSIL 650

[Close]

BLAST of Clc11G09660 vs. ExPASy Swiss-Prot
Match: Q6H7J6 (Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL14 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47
Identity = 95/141 (67.38%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAF +IG   + YPAPYA VY NMA+L + GF+SLP+NCL+LC +F AAAI 
Sbjct: 562 CVFWL-FYKAFSNIGTSGTEYPAPYAIVYRNMAILGVDGFNSLPENCLTLCYIFFAAAIA 621

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL   KVS+++P+P AMAIP Y+G YFAIDM LGS ILFVW K NKAK  A+AF 
Sbjct: 622 INLIRDLAPHKVSRFIPLPMAMAIPFYIGSYFAIDMFLGSVILFVWEKLNKAK--ADAFG 681

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLP SIL
Sbjct: 682 PAVASGLICGDGIWTLPQSIL 699

[Close]

BLAST of Clc11G09660 vs. ExPASy Swiss-Prot
Match: Q9SHY2 (Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana OX=3702 GN=YSL7 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-47
Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAF D GQP +AYPAPYA VY NM++L ++GFS+LPK+CL LC +F AAA++
Sbjct: 522 CVFWL-FYKAFPDFGQPGTAYPAPYALVYRNMSILGVEGFSALPKHCLMLCYIFFAAAVI 581

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           +N IRD  G K ++++P+P AMAIP Y+G YF IDMCLGS ILF+WRK NK K  A+A++
Sbjct: 582 VNGIRDALGPKWARFIPLPMAMAIPFYLGGYFTIDMCLGSLILFIWRKLNKPK--ADAYS 641

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
            AVA+GLICG+G+WTLPSSIL
Sbjct: 642 SAVASGLICGEGIWTLPSSIL 659

[Close]

BLAST of Clc11G09660 vs. ExPASy Swiss-Prot
Match: Q6R3K4 (Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana OX=3702 GN=YSL8 PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 7.6e-47
Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+G P S YPAP+ATVY +MA L ++G SSLP++CL LC VF   AIL
Sbjct: 557 CVFWL-FYKAFDDLGLPNSEYPAPFATVYRSMAKLGVEGVSSLPRDCLMLCYVFFGVAIL 616

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLI+D  G +  ++VP+P AMAIP ++GPYFAIDMC+GSFILFVW + +  K  AEAFA
Sbjct: 617 INLIKDCLGNRWGRFVPLPMAMAIPFFLGPYFAIDMCVGSFILFVWERLDAPK--AEAFA 676

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
            AVA+GLICGDG+WTLPSS+L
Sbjct: 677 TAVASGLICGDGIWTLPSSVL 694

[Close]

BLAST of Clc11G09660 vs. ExPASy Swiss-Prot
Match: Q5JQD7 (Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL12 PE=2 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 9.9e-47
Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAF DIG   + YPAPYA VY NMA+L + GFSSLPK+CL+LC +F AAAI 
Sbjct: 552 CVFWL-FYKAFADIGVSGTEYPAPYAIVYRNMAILGVDGFSSLPKHCLTLCYIFFAAAIA 611

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INL RDL   KV++++P+P AMAIP Y+G YFAIDM +G+ ILFVW   NKAK  AEAFA
Sbjct: 612 INLARDLAPSKVARFIPLPMAMAIPFYIGSYFAIDMFIGTVILFVWEMVNKAK--AEAFA 671

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLP SIL
Sbjct: 672 PAVASGLICGDGIWTLPQSIL 689

[Close]

BLAST of Clc11G09660 vs. ExPASy Swiss-Prot
Match: Q0J932 (Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL10 PE=2 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-42
Identity = 82/134 (61.19%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 42  YKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAILINLIRDL 101
           YKAF DIG P S YP+P A VY NMA+L ++G  SLPK+CL LC  F  AAI +NL RDL
Sbjct: 523 YKAFHDIGMPGSEYPSPNALVYRNMAILGVQGLGSLPKHCLDLCIGFFVAAIAVNLARDL 582

Query: 102 TGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFAPAVAAGL 161
              KV++++P+P AMAIP Y+GPYF IDMC+GS I FVW + + A+  A+AFAP VA+GL
Sbjct: 583 AAPKVARFLPLPMAMAIPFYLGPYFGIDMCIGSLIRFVWDRLDGAR--AKAFAPPVASGL 642

Query: 162 ICGDGLWTLPSSIL 176
           ICGDG+WTLP S+L
Sbjct: 643 ICGDGIWTLPQSVL 654

[Close]

BLAST of Clc11G09660 vs. ExPASy TrEMBL
Match: A0A5D3C492 (Putative metal-nicotianamine transporter YSL7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001520 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.9e-57
Identity = 116/141 (82.27%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQPESAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 540 CVFWL-FYKAFDDLGQPESAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 599

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKKVSQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K NKAK  AEAFA
Sbjct: 600 INLIRDLSGKKVSQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKINKAK--AEAFA 659

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPSSIL
Sbjct: 660 PAVASGLICGDGIWTLPSSIL 677

[Close]

BLAST of Clc11G09660 vs. ExPASy TrEMBL
Match: A0A5D3C445 (Putative metal-nicotianamine transporter YSL8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001580 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.4e-56
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQPESAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 369 CVFWL-FYKAFDDLGQPESAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 428

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKKVSQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K N  KA A+AFA
Sbjct: 429 INLIRDLSGKKVSQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKIN--KANADAFA 488

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPS+IL
Sbjct: 489 PAVASGLICGDGIWTLPSTIL 506

[Close]

BLAST of Clc11G09660 vs. ExPASy TrEMBL
Match: A0A0A0LQ29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404760 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.0e-55
Identity = 113/141 (80.14%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+GQ  SAYPAPYATVY NMALLA++GFSSLPKNCLSLC  F AAAI+
Sbjct: 541 CVFWL-FYKAFDDLGQLGSAYPAPYATVYRNMALLAVEGFSSLPKNCLSLCYGFFAAAIV 600

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKKVSQY+PIP AMAIP Y+G YFAIDMCLGS ILFVW K NKAK  A+AFA
Sbjct: 601 INLIRDLSGKKVSQYIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKINKAK--ADAFA 660

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPSSIL
Sbjct: 661 PAVASGLICGDGIWTLPSSIL 678

[Close]

BLAST of Clc11G09660 vs. ExPASy TrEMBL
Match: A0A0A0LSX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404780 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 112/141 (79.43%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDDIGQPESAYPAPYATVY NMALLA++G SSLPKNCL L  +F AAAI+
Sbjct: 510 CVFWL-FYKAFDDIGQPESAYPAPYATVYRNMALLAVEGVSSLPKNCLYLSYLFFAAAIV 569

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           +NLIRDL  KKVSQY+PIPTAMAIP Y+GPYFAIDMCLGS ILFVW K NKAK  A+AFA
Sbjct: 570 LNLIRDLLEKKVSQYIPIPTAMAIPFYIGPYFAIDMCLGSLILFVWEKINKAK--ADAFA 629

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLP SIL
Sbjct: 630 PAVASGLICGDGIWTLPRSIL 647

[Close]

BLAST of Clc11G09660 vs. ExPASy TrEMBL
Match: A0A6J1H4G2 (probable metal-nicotianamine transporter YSL7 OS=Cucurbita moschata OX=3662 GN=LOC111460393 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.0e-54
Identity = 108/141 (76.60%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFD++GQP+S YPAPYATVY NMALLA++GFSSLPKNCL+LC  F AAA++
Sbjct: 537 CVFWL-FYKAFDNLGQPDSTYPAPYATVYRNMALLAVEGFSSLPKNCLTLCYGFFAAAVV 596

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLIRDL+GKK+ Q++PIP AMAIP Y+G YFAIDMCLGS ILFVW K NKAK  AEAFA
Sbjct: 597 INLIRDLSGKKIRQFIPIPMAMAIPFYIGSYFAIDMCLGSLILFVWEKINKAK--AEAFA 656

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
           PAVA+GLICGDG+WTLPSSIL
Sbjct: 657 PAVASGLICGDGIWTLPSSIL 674

[Close]

BLAST of Clc11G09660 vs. TAIR 10
Match: AT1G65730.1 (YELLOW STRIPE like 7 )

HSP 1 Score: 189.5 bits (480), Expect = 2.4e-48
Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAF D GQP +AYPAPYA VY NM++L ++GFS+LPK+CL LC +F AAA++
Sbjct: 522 CVFWL-FYKAFPDFGQPGTAYPAPYALVYRNMSILGVEGFSALPKHCLMLCYIFFAAAVI 581

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           +N IRD  G K ++++P+P AMAIP Y+G YF IDMCLGS ILF+WRK NK K  A+A++
Sbjct: 582 VNGIRDALGPKWARFIPLPMAMAIPFYLGGYFTIDMCLGSLILFIWRKLNKPK--ADAYS 641

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
            AVA+GLICG+G+WTLPSSIL
Sbjct: 642 SAVASGLICGEGIWTLPSSIL 659

[Close]

BLAST of Clc11G09660 vs. TAIR 10
Match: AT1G48370.1 (YELLOW STRIPE like 8 )

HSP 1 Score: 188.3 bits (477), Expect = 5.4e-48
Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+G P S YPAP+ATVY +MA L ++G SSLP++CL LC VF   AIL
Sbjct: 557 CVFWL-FYKAFDDLGLPNSEYPAPFATVYRSMAKLGVEGVSSLPRDCLMLCYVFFGVAIL 616

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           INLI+D  G +  ++VP+P AMAIP ++GPYFAIDMC+GSFILFVW + +  K  AEAFA
Sbjct: 617 INLIKDCLGNRWGRFVPLPMAMAIPFFLGPYFAIDMCVGSFILFVWERLDAPK--AEAFA 676

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
            AVA+GLICGDG+WTLPSS+L
Sbjct: 677 TAVASGLICGDGIWTLPSSVL 694

[Close]

BLAST of Clc11G09660 vs. TAIR 10
Match: AT3G17650.1 (YELLOW STRIPE like 5 )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 80/141 (56.74%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 35  CVAWSNSYKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAIL 94
           CV W   YKAFDD+G P + YPAP+ATVY +MA L ++G +SLP+ CL LC  F   AIL
Sbjct: 547 CVFWL-FYKAFDDLGLPNTEYPAPFATVYRSMAKLGVEGVASLPRECLVLCYAFFGVAIL 606

Query: 95  INLIRDLTGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFA 154
           +N+++D       +++P+P AMAIP ++GPYFAIDMC+GS ILF+W + + AK  AEAF 
Sbjct: 607 VNIVKDSLHSNWGRFIPLPMAMAIPFFLGPYFAIDMCVGSLILFIWERVDAAK--AEAFG 666

Query: 155 PAVAAGLICGDGLWTLPSSIL 176
            AVA+GLICGDG+W+LPSS+L
Sbjct: 667 TAVASGLICGDGIWSLPSSVL 684

[Close]

BLAST of Clc11G09660 vs. TAIR 10
Match: AT3G27020.1 (YELLOW STRIPE like 6 )

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-41
Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 47  DIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAILINLIRDLTGKKV 106
           DIG P   Y APYA ++  MA+L ++GF+ LPK+CL+LC  F  AA+++NL+RD+T  K+
Sbjct: 531 DIGDPNGPYKAPYAVIFREMAILGIEGFAELPKHCLALCYGFFIAALIVNLLRDITPPKI 590

Query: 107 SQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFAPAVAAGLICGDG 166
           SQ++PIP AMA+P Y+G YFAIDM +G+ ILFVW + N  + +AE FA AVA+GLICGDG
Sbjct: 591 SQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERIN--RKDAEDFAGAVASGLICGDG 650

Query: 167 LWTLPSSILLWLELGLP 184
           +WT+PS+IL  L +  P
Sbjct: 651 IWTIPSAILSILRINPP 665

[Close]

BLAST of Clc11G09660 vs. TAIR 10
Match: AT4G24120.1 (YELLOW STRIPE like 1 )

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-41
Identity = 75/134 (55.97%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 42  YKAFDDIGQPESAYPAPYATVYHNMALLALKGFSSLPKNCLSLCTVFSAAAILINLIRDL 101
           YKAF DIG P   + APYA +Y NMA+L ++GFS+LP +CL +C  F   A+L+N++RDL
Sbjct: 527 YKAF-DIGNPNGEFKAPYALIYRNMAILGVQGFSALPLHCLQMCYGFFGFAVLVNVVRDL 586

Query: 102 TGKKVSQYVPIPTAMAIPLYMGPYFAIDMCLGSFILFVWRKNNKAKAEAEAFAPAVAAGL 161
           T  K+ +++P+PTAMA+P  +G YFAIDMC+G+ I+FVW K N+ K  AE   PAVA+GL
Sbjct: 587 TPAKIGRFMPLPTAMAVPFLVGAYFAIDMCVGTLIVFVWEKMNRKK--AEFMVPAVASGL 646

Query: 162 ICGDGLWTLPSSIL 176
           ICG+GLWTLP+++L
Sbjct: 647 ICGEGLWTLPAAVL 657

The following BLAST results are available for this feature:

BLAST of Clc11G09660 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06667.1	5.9e-57	82.27	putative metal-nicotianamine transporter YSL7 [Cucumis melo var. makuwa]	[more]
XP_038885059.1	1.7e-56	81.56	probable metal-nicotianamine transporter YSL7 [Benincasa hispida]	[more]
TYK06671.1	1.1e-55	80.14	putative metal-nicotianamine transporter YSL8 [Cucumis melo var. makuwa]	[more]
XP_004138807.1	1.2e-54	80.14	probable metal-nicotianamine transporter YSL7 [Cucumis sativus] >KGN63124.1 hypo...	[more]
XP_004138639.1	2.8e-54	79.43	probable metal-nicotianamine transporter YSL8 isoform X1 [Cucumis sativus] >KAE8...	[more]

BLAST of Clc11G09660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6H7J6	1.5e-47	67.38	Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica O...	[more]
Q9SHY2	3.4e-47	63.12	Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6R3K4	7.6e-47	64.54	Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5JQD7	9.9e-47	66.67	Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica O...	[more]
Q0J932	1.1e-42	61.19	Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica O...	[more]

BLAST of Clc11G09660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C492	2.9e-57	82.27	Putative metal-nicotianamine transporter YSL7 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3C445	5.4e-56	80.14	Putative metal-nicotianamine transporter YSL8 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0LQ29	6.0e-55	80.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404760 PE=4 SV=1	[more]
A0A0A0LSX8	1.3e-54	79.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404780 PE=4 SV=1	[more]
A0A6J1H4G2	3.0e-54	76.60	probable metal-nicotianamine transporter YSL7 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Clc11G09660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65730.1	2.4e-48	63.12	YELLOW STRIPE like 7	[more]
AT1G48370.1	5.4e-48	64.54	YELLOW STRIPE like 8	[more]
AT3G17650.1	1.4e-43	56.74	YELLOW STRIPE like 5	[more]
AT3G27020.1	3.7e-41	55.47	YELLOW STRIPE like 6	[more]
AT4G24120.1	4.9e-41	55.97	YELLOW STRIPE like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004813	Oligopeptide transporter, OPT superfamily	PFAM	PF03169	OPT	coord: 42..175 e-value: 6.9E-25 score: 87.7
IPR045035	Metal-nicotianamine transporter YSL-like	PANTHER	PTHR31645	OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED	coord: 34..177
None	No IPR available	PANTHER	PTHR31645:SF73	SUBFAMILY NOT NAMED	coord: 34..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G09660.1	Clc11G09660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035672	oligopeptide transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0035673	oligopeptide transmembrane transporter activity