Clc11G07970 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G07970
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal_S7 domain-containing protein
LocationClcChr11: 7819949 .. 7824366 (+)
RNA-Seq ExpressionClc11G07970
SyntenyClc11G07970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACTCGTCTGGTAACCAGTTGAGATCGGGCTACGGCCCAGCATGAAATTCATTTTATTCCCCTTGCCAAATTTTGTGGAAGAAATAATTTGCTCTTTTATTTTGTTTAATAGGGGTTTCCTAATTACTAATCAGGAATATCGGTAAAAAAAAATTCTCCGCATGATTCTTTCTACAATTTCATCTTATGTTACCAAAGAAAAATCCAGTCTTTCAAGAAGTTATATAAATTGGATTGGCGCCATTGACGATGCCGTTTTGGGTGACTTTTTCGTGCTTGTCCTTGGAAATCAGAGACAAATGTTCGGATCAACCCTGCATTAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGATCGAACCATTTCTTCTGACCCTTTTTCAAATTTGATAAATGTTGGTTGATCGTATATTTCATTATAGTTCTATGATTCAGAGTATCATTTCCTATTTGATCCCTTTGAATTCCATATTCCAAGTTACGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTCTTATGTACCCATAGGTGTTATATTGGATTTGAATCAGATTTCGGATCAATCTATATTGATTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTATTTTTTGTTTTGGATCTTCCAAATCATTCCCGGGGGAGGTCCGGACCCATTTTTTTCTGATCCTTCGATAAAAAGATTCATTCTCTTCATAAAAAATAGGAGGTAGAACCAATAAATATTTCTTTTTCGATTCATCCCTAGAGTTGAATACCTCATTCAAGAATTGTTTTTGATCGGATTGTTTTTTTTTCATGCAAAAAAGATTTCAGTTGCTACAATGATATGACCAATATAACATATCTTGACTGGTTGGTTTTTTAGATCCAGATAATGCGAAGCGATGAGTTGGTTATTAGTTTTATAATTATTAGTTCAGATTATGTATGGGCTGGTTTTGATCTAAGATTTCAATTCTTCCATGTTTCAGCAGTAGTATATTGTTCCATGGAGCTAAGGTCCAAAATATGGAAGAAACTGGTGTTTTCACGACTCTATCACCCAGTCAATTCTGTTCCACTTAATCCCTATTTCATGGCCACATATTTTTCCGGCTAAGGAGAGGGAGACAAGAACTACATTGCTATACCTTAATTTAACTCAATGCTTGCACTTGGATCTTTCTCCCCTTTCTACGATTCTGAAGAGTCAAGCAAATTTCTTAAGATCGTGACAACCCTTAGTCAGAGTACAGACTAAGCTCTGAAACCCTTCAACGTGTCAACAAACAATTCGAAATGCCTCGACTTTTTTAGAACAGGTCCGAGTCAAATAGTAATGATTCGAAGCACCTCTTTTTACACTATTTCGGAAACCCAAGGACTCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAAGAAAGGGAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATACATATAGAATTCTGTGGAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTACAATATGGGGTCAAAAAGCCAAAATAAATGATTTTAGCCCTTATAAAAAGAAAACTTATTCTTGAACCCCTTTCACGCTCATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACCTTTATTTTTATTTATTTATAAATATTTTTAGTAATCTTTAATATATTGGTATTATTTATATATTAGGATTGGAGATATCTCTTCTTTTGAGCCCTTACTTTATCTAATTTATCTAAATGGAATTGAATTGCTAATAAAAAAAGTTTTTATCGATTATATGGATATCCATCGCGGTGCTTTCTGTCAGTAAGACTGATTTTCTTTGACTTTCAAAGTGTGTGACTTTTGTTTTGTTTTAGTTGCCCAACTCTCTTGCAGACCCTTGCTTCGCCTGAACTGGTTCTGATAGTAATTCTTCCGTTGTGGTGGTCACCACCACTTGTTACACCATCTCGACAGAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATCTGTTTCGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTATATAACTTAAGCGACACAATAAAAGCTCCGCTGTTATCTGCTACATTCAAAAGGGTTTGAGGTTGAATCATATTATTTTGGAATCTTTTCTTTCAATGCAAAGGGCGAAATAAAAAAAAAAAAAAAGAAATATTGTTTTTCCAAAAAAAAAGAAATCTGCAATTGTTTTTTTTTCATCTCAAACAAAGACCGCTGTCCTTTGATTCTACATTTCTATCCCGAAGTAATGAATTGGGTTCGTATAGGCATTTTGGATGCCGCTATTGAAATAGCTTTTCTGGCTATATTTTCAGCTACTCCACTCATTTCATAAAGTATTCTACCTGGTTTAACAACAGCTACCCAATATTCGGGGGATCCGCAAAATACGAAACTAATTATGACCTGAGGTTCCTACATTCCTAAGAATCCGAAGAGGGGATCTCTCTCGATCATAAGCATTCTTTCGTCGCTTACTTGTTGAATTGGTCTTCGGCAATCATTTCGGAGTCGTTCAAATATCAGTAATAAACTGATTCAACTTATCCGGGGCAACTCAGCCCTTTAACATTCTCTTTCTCTCTTTCTGGCTTAGACTACCAGGGAAATGTTCTTCTTGATAGCACAGGGAATTCCCTTTTGCAGTTAAGGCTTACCCAAACTCAAGCAAGGGTAGCACCGATTACTGAGATTCCCTTTACCTTTCGCTCAATGAAAAAATGGGTCAGATTCTACAGGATCAAACCGATGGGACTTAAGGAATGATCGAAGGGAATAAAAAAAGAAAAAAAAAAGAGAGGGAAAAATAAGTAAATAAAAATGACGTAGAAGAGCCCAGATTCCAAATGAATGAAAACGTGACTGAATTGGATCCGATAAAGAATCAAACCTATTTAAATGTTCCTGCTATTCTATATTTCCTTGAAAAGGGTGCTCAACCTACAGGAACTGTTCATGATATTTTAAAGAAGGCAGGTGTTTTTACGGAACTTCACCTTAATCAATTGACTTTCTCGATAACCTTTCTGAACGTCCGTCTTCGCGTGGCGATTTGAAAAGGGGTATATATCTCTTGTAATGCTTTCTACTATTCTGATCGAGAAAGAATCTCTTCTGAACGACCAAGTCATAATGAGATTAAAAAACGTATACCCCCAAACAAATACTAAACAAAGGGTTCCACAAGCAAGCTATTATTCTGGGGATCCCCATTGAGGAGCATCAAACCCTAATGAAAGATCTCTCCCCCCCCTATTAACAACAGGTCATCATTTTTCAGCCACAAACAAGAAGGGATCTCCTACGGAACGATAGGAAAGGCTTCATCGATGTTACCTACCAAATAAAAGGCTTGTTCGGGAAGACCATCTAATTCTCCGGAAAGGATTAATTTAAACCCTCTAATTGTTTCTGCTAGGCCAACGTATTTCCCGGGGGAACCAGTAAATGATCCGTTCCCCTGTGGATCATGGCCTTACCACTCGGTCCCCGATGGCCAGCGGGGGATTCGGTATAGTAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGGACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTTGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGCGCTCTTTCTTGGGTAATTCTAGAAGTTTTTTGATTGAATTATGATACAAAGAGCAAAAAGAATCGAATAATTATTCTATGATTCATAAATTTTGACTAGATCTATGTATGGGATAAACAGTTGTTGGTGAAAAATCGAAAACTGTAAAAGTCGGATCGTTCGAGAAGGCCATTGTAGTGCGCTTAAACGAGCGTTTGGGGGGTCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGTAGTGAGTTCCGATGAAGAGCCGTAAGTCGAAGAGTCTGAAAGAGATGAGCGATTTTGTATCTAACTGTATAAAAGCCGGGGCGGATCTATGAATAAGAGATGTTGTGCGAGTATCTACAGGCCAGCGTCGCTGATGATGCAGAAAGCTTTTTTTTATAGAGAGAGAGTCAAGGGGGCTTCCGCGGGCGATTCTGTAACCGCAGGCAGCTCAGACCCGACAACATGA

mRNA sequence

ATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACTCGTCTGAACAGGTCCGAGTCAAATAGTAATGATTCGAAGCACCTCTTTTTACACTATTTCGGAAACCCAAGGACTCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAAGAAAGGGAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATACATATAGAATTCTGTGGAAAGCCGTATTCGATGAAAGTCGTATCTACTCCACTCATTTCATAAAGTATTCTACCTGGTTTAACAACAGCTACCCAATATTCGGGGGATCCGCAAAATACGAAACTAATTATGACCTGAGGCCAACGTATTTCCCGGGGGAACCAGTAAATGATCCGTTCCCCTGTGGATCATGGCCTTACCACTCGGTCCCCGATGGCCAGCGGGGGATTCGGTATAGTAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGGACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTTGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGCGCTCTTTCTTGGTTGTTGGTGAAAAATCGAAAACTGTAAAAGTCGGATCGTTCGAGAAGGCCATTGTAGTGCGCTTAAACGAGCGTTTGGGGGGTCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGTAGTGAGTTCCGATGAAGAGCCGCCAGCGTCGCTGATGATGCAGAAAGCTTTTTTTTATAGAGAGAGAGTCAAGGGGGCTTCCGCGGGCGATTCTGTAACCGCAGGCAGCTCAGACCCGACAACATGA

Coding sequence (CDS)

ATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACTCGTCTGAACAGGTCCGAGTCAAATAGTAATGATTCGAAGCACCTCTTTTTACACTATTTCGGAAACCCAAGGACTCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAAGAAAGGGAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATACATATAGAATTCTGTGGAAAGCCGTATTCGATGAAAGTCGTATCTACTCCACTCATTTCATAAAGTATTCTACCTGGTTTAACAACAGCTACCCAATATTCGGGGGATCCGCAAAATACGAAACTAATTATGACCTGAGGCCAACGTATTTCCCGGGGGAACCAGTAAATGATCCGTTCCCCTGTGGATCATGGCCTTACCACTCGGTCCCCGATGGCCAGCGGGGGATTCGGTATAGTAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGGACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTTGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGCGCTCTTTCTTGGTTGTTGGTGAAAAATCGAAAACTGTAAAAGTCGGATCGTTCGAGAAGGCCATTGTAGTGCGCTTAAACGAGCGTTTGGGGGGTCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGTAGTGAGTTCCGATGAAGAGCCGCCAGCGTCGCTGATGATGCAGAAAGCTTTTTTTTATAGAGAGAGAGTCAAGGGGGCTTCCGCGGGCGATTCTGTAACCGCAGGCAGCTCAGACCCGACAACATGA

Protein sequence

MPRTAKTENSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRIYSTHFIKYSTWFNNSYPIFGGSAKYETNYDLRPTYFPGEPVNDPFPCGSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTLVRQFRLNSSLYVSGPTGRAGALRSFLVVGEKSKTVKVGSFEKAIVVRLNERLGGPTMNPMSEALQGTLSALRFWVVSSDEEPPASLMMQKAFFYRERVKGASAGDSVTAGSSDPTT
Homology
[Close]
BLAST of Clc11G07970 vs. NCBI nr
Match: KAB2041250.1 (hypothetical protein ES319_D02G135700v1 [Gossypium barbadense])

HSP 1 Score: 145.2 bits (365), Expect = 8.9e-31
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 0 

Query: 9  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNS 68
          N +T+ NRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNS
Sbjct: 3  NPITK-NRSGSNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKGRETDTQFKVSKQNS 62

Query: 69 ILDLIDTYRILWKAVFDESRIY 91
          ILDLIDTY ILWK VFDESR+Y
Sbjct: 63 ILDLIDTYGILWKTVFDESRMY 83

[Close]
BLAST of Clc11G07970 vs. NCBI nr
Match: RZC88934.1 (hypothetical protein C5167_030630 [Papaver somniferum])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-30
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 17  SESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTY 76
           SESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTY
Sbjct: 105 SESNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTY 164

Query: 77  RILWKAVFDESRIY 91
           RILWKAVFDESR+Y
Sbjct: 165 RILWKAVFDESRMY 178

[Close]
BLAST of Clc11G07970 vs. NCBI nr
Match: RZC92595.1 (hypothetical protein C5167_029533 [Papaver somniferum])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-30
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 17  SESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLIDTY 76
           SESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLIDTY
Sbjct: 76  SESNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTY 135

Query: 77  RILWKAVFDESRIY 91
           RILWKAVFDESR+Y
Sbjct: 136 RILWKAVFDESRMY 149

[Close]
BLAST of Clc11G07970 vs. NCBI nr
Match: BBN70001.1 (Ribosomal protein S7p/S5e family protein, partial [Prunus dulcis])

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-30
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 15  NRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLID 74
           NRSESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLID
Sbjct: 151 NRSESNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLID 210

Query: 75  TYRILWKAVFDESR 89
           TYRILWKAVFDES+
Sbjct: 211 TYRILWKAVFDESQ 224

[Close]
BLAST of Clc11G07970 vs. NCBI nr
Match: TYG46624.1 (hypothetical protein ES288_D11G270400v1 [Gossypium darwinii])

HSP 1 Score: 143.7 bits (361), Expect = 2.6e-30
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 14 LNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLI 73
          LNRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNSILDLI
Sbjct: 19 LNRSGSNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLI 78

Query: 74 DTYRILWKAVFDESRIY 91
          DTY I WK VFDESR+Y
Sbjct: 79 DTYGIPWKTVFDESRMY 95

[Close]
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match: A0A5J5SCK7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D02G135700v1 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.3e-31
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 0 

Query: 9  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNS 68
          N +T+ NRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNS
Sbjct: 3  NPITK-NRSGSNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKGRETDTQFKVSKQNS 62

Query: 69 ILDLIDTYRILWKAVFDESRIY 91
          ILDLIDTY ILWK VFDESR+Y
Sbjct: 63 ILDLIDTYGILWKTVFDESRMY 83

[Close]
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match: A0A5H2Y3L6 (Ribosomal protein S7p/S5e family protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_1328S000100 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.4e-31
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 15  NRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLID 74
           NRSESNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+K RETDTQFKVSKQNSILDLID
Sbjct: 151 NRSESNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLID 210

Query: 75  TYRILWKAVFDESR 89
           TYRILWKAVFDES+
Sbjct: 211 TYRILWKAVFDESQ 224

[Close]
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match: A0A5D2AP26 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D11G270400v1 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-30
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 14 LNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNSILDLI 73
          LNRS SNSNDSKH FLHYFGNPRTQSYGYVKYRISNPS+KGRETDTQFKVSKQNSILDLI
Sbjct: 19 LNRSGSNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLI 78

Query: 74 DTYRILWKAVFDESRIY 91
          DTY I WK VFDESR+Y
Sbjct: 79 DTYGIPWKTVFDESRMY 95

[Close]
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match: A0A6N2KTW4 (Ribosomal_S7 domain-containing protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS134921 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-30
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0 

Query: 9   NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNS 68
           NS    +RSESNSNDSKH FLHYFGNPRTQSYGY KYRISNPS+K RETDTQFKVSKQNS
Sbjct: 120 NSQEHSSRSESNSNDSKHFFLHYFGNPRTQSYGYGKYRISNPSRKRRETDTQFKVSKQNS 179

Query: 69  ILDLIDTYRILWKAVFDESRIY 91
           IL+LIDTYRILWKAVFDESR+Y
Sbjct: 180 ILNLIDTYRILWKAVFDESRMY 201

[Close]
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match: A0A4Y7JJM5 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_021922 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-30
Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 9  NSVTRLNRSESNSNDSKHLFLHYFGNPRTQSYGYVKYRISNPSKKGRETDTQFKVSKQNS 68
          N +T+++ SESNSNDSKH FLHYFGNPRTQS+GYVKYRISNPS+K RETDTQFKVSKQNS
Sbjct: 3  NPITKVS-SESNSNDSKHFFLHYFGNPRTQSHGYVKYRISNPSRKRRETDTQFKVSKQNS 62

Query: 69 ILDLIDTYRILWKAVFDESRIY 91
          ILDLIDTYRILWK VFDESR+Y
Sbjct: 63 ILDLIDTYRILWKVVFDESRMY 83

The following BLAST results are available for this feature:
BLAST of Clc11G07970 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB2041250.18.9e-3187.80hypothetical protein ES319_D02G135700v1 [Gossypium barbadense][more]
RZC88934.11.2e-3094.59hypothetical protein C5167_030630 [Papaver somniferum][more]
RZC92595.11.2e-3094.59hypothetical protein C5167_029533 [Papaver somniferum][more]
BBN70001.11.5e-3094.59Ribosomal protein S7p/S5e family protein, partial [Prunus dulcis][more]
TYG46624.12.6e-3090.91hypothetical protein ES288_D11G270400v1 [Gossypium darwinii][more]
BLAST of Clc11G07970 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5J5SCK74.3e-3187.80Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D02G135700v1 PE... [more]
A0A5H2Y3L67.4e-3194.59Ribosomal protein S7p/S5e family protein (Fragment) OS=Prunus dulcis OX=3755 GN=... [more]
A0A5D2AP261.3e-3090.91Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D11G270400v1 PE=... [more]
A0A6N2KTW41.3e-3086.59Ribosomal_S7 domain-containing protein (Fragment) OS=Salix viminalis OX=40686 GN... [more]
A0A4Y7JJM52.8e-3085.37Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_021922 PE=4 SV=1[more]
BLAST of Clc11G07970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G07970.1Clc11G07970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome