Clc11G07830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G07830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr11: 7773961 .. 7774617 (+)
RNA-Seq Expression	Clc11G07830
Synteny	Clc11G07830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGGACTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCTGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGTACCTTTATTACATTAGCGAAAACTTATTTCTTCTTGTTCATTTCTATAGCTTGTTCAGATTCTACATATTGATCGTTTTGAACTAAAAGTAAACTTTTTGGTGGAATAGTGACGTTATGTATAATATCCTCACTCTCAATAGTTACATACAAGTCTATATAACATAAAAAGAGGATTTGGCCCGAACTGTTCGGCAGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCTCAACTATTCCCACCGCTTTTGAAAGGCGAGACAAGCTACCTTTAGCTAGGAGCCTCTTTTCCTTCTGCCTAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCTTCTTTTGAGTATGATTGGGCCCTGCTGTGGTAGAACCTAGTGAAC

mRNA sequence

ATGAACGGGACTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCTGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCTCAACTATTCCCACCGCTTTTGAAAGGCGAGACAAGCTACCTTTAGCTAGGAGCCTCTTTTCCTTCTGCCTAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCTTCTTTTGAGTATGATTGGGCCCTGCTGTGGTAGAACCTAGTGAAC

Coding sequence (CDS)

ATGAACGGGACTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCTGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCTCAACTATTCCCACCGCTTTTGAAAGGCGAGACAAGCTACCTTTAGCTAGGAGCCTCTTTTCCTTCTGCCTAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAA

Protein sequence

MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGGFPRVTHPFATLFSTIPTAFERRDKLPLARSLFSFCLAPRKQRSTCMC

Homology

[Close]

BLAST of Clc11G07830 vs. NCBI nr
Match: KYP43984.1 (hypothetical protein KK1_034569 [Cajanus cajan])

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSALEG TCASSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 29 MNGAKRSAEAVGCKNESVGERSALEGRTCASSGGRSGSENVGLSNANVGENPMPRKPKGS 88

Query: 61 SARFVHGGFPR 72
          SARFVHGG  R
Sbjct: 89 SARFVHGGVIR 99

[Close]

BLAST of Clc11G07830 vs. NCBI nr
Match: KYP38298.1 (hypothetical protein KK1_040460 [Cajanus cajan] >KYP70014.1 hypothetical protein KK1_009222 [Cajanus cajan])

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSALEG TCASSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 29 MNGAKRSAEAVGCKNESVGERSALEGRTCASSGGRSGSENVGLSNANVGENPMPRKPKGS 88

Query: 61 SARFVHGG 69
          SARFVHGG
Sbjct: 89 SARFVHGG 96

[Close]

BLAST of Clc11G07830 vs. NCBI nr
Match: KYP38300.1 (hypothetical protein KK1_040463 [Cajanus cajan] >KYP38304.1 hypothetical protein KK1_040467 [Cajanus cajan])

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSALEG TCASSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 1  MNGAKRSAEAVGCKNESVGERSALEGRTCASSGGRSGSENVGLSNANVGENPMPRKPKGS 60

Query: 61 SARFVHGG 69
          SARFVHGG
Sbjct: 61 SARFVHGG 68

[Close]

BLAST of Clc11G07830 vs. NCBI nr
Match: KAF2282338.1 (hypothetical protein GH714_043867 [Hevea brasiliensis])

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 67/71 (94.37%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKNASVGERSALEGST ASSGGRSGSENVGLSNANIGENPMPRKPKGS
Sbjct: 1  MNGVKRSAEAVGCKNASVGERSALEGSTRASSGGRSGSENVGLSNANIGENPMPRKPKGS 60

Query: 61 SARFVHGGFPR 72
          SARFVHGG  R
Sbjct: 61 SARFVHGGVRR 71

[Close]

BLAST of Clc11G07830 vs. NCBI nr
Match: KAG6621045.1 (hypothetical protein I3842_Q035900 [Carya illinoinensis])

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-25
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCK ASVGERSAL GSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS
Sbjct: 1  MNGAKRSAEAVGCKKASVGERSALGGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60

Query: 61 SARFVHGG 69
          SARFVHGG
Sbjct: 61 SARFVHGG 68

[Close]

BLAST of Clc11G07830 vs. ExPASy TrEMBL
Match: A0A151TSK6 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_009222 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSALEG TCASSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 29 MNGAKRSAEAVGCKNESVGERSALEGRTCASSGGRSGSENVGLSNANVGENPMPRKPKGS 88

Query: 61 SARFVHGG 69
          SARFVHGG
Sbjct: 89 SARFVHGG 96

[Close]

BLAST of Clc11G07830 vs. ExPASy TrEMBL
Match: A0A151R6Q7 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_040463 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSALEG TCASSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 1  MNGAKRSAEAVGCKNESVGERSALEGRTCASSGGRSGSENVGLSNANVGENPMPRKPKGS 60

Query: 61 SARFVHGG 69
          SARFVHGG
Sbjct: 61 SARFVHGG 68

[Close]

BLAST of Clc11G07830 vs. ExPASy TrEMBL
Match: A0A151RN55 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_034569 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSALEG TCASSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 29 MNGAKRSAEAVGCKNESVGERSALEGRTCASSGGRSGSENVGLSNANVGENPMPRKPKGS 88

Query: 61 SARFVHGGFPR 72
          SARFVHGG  R
Sbjct: 89 SARFVHGGVIR 99

[Close]

BLAST of Clc11G07830 vs. ExPASy TrEMBL
Match: A0A6A6K2E6 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_043867 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 67/71 (94.37%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKNASVGERSALEGST ASSGGRSGSENVGLSNANIGENPMPRKPKGS
Sbjct: 1  MNGVKRSAEAVGCKNASVGERSALEGSTRASSGGRSGSENVGLSNANIGENPMPRKPKGS 60

Query: 61 SARFVHGGFPR 72
          SARFVHGG  R
Sbjct: 61 SARFVHGGVRR 71

[Close]

BLAST of Clc11G07830 vs. ExPASy TrEMBL
Match: A0A151R6X5 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_040453 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24
Identity = 62/68 (91.18%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MNGTKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 60
          MNG KRSAEAVGCKN SVGERSA EG TC SSGGRSGSENVGLSNAN+GENPMPRKPKGS
Sbjct: 1  MNGAKRSAEAVGCKNESVGERSASEGRTCTSSGGRSGSENVGLSNANVGENPMPRKPKGS 60

Query: 61 SARFVHGG 69
          SARFVHGG
Sbjct: 61 SARFVHGG 68

The following BLAST results are available for this feature:

BLAST of Clc11G07830 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP43984.1	2.2e-25	91.55	hypothetical protein KK1_034569 [Cajanus cajan]	[more]
KYP38298.1	2.2e-25	94.12	hypothetical protein KK1_040460 [Cajanus cajan] >KYP70014.1 hypothetical protein...	[more]
KYP38300.1	2.2e-25	94.12	hypothetical protein KK1_040463 [Cajanus cajan] >KYP38304.1 hypothetical protein...	[more]
KAF2282338.1	2.2e-25	94.37	hypothetical protein GH714_043867 [Hevea brasiliensis]	[more]
KAG6621045.1	3.7e-25	95.59	hypothetical protein I3842_Q035900 [Carya illinoinensis]	[more]

BLAST of Clc11G07830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc11G07830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151TSK6	1.1e-25	94.12	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_009222 PE=4 SV=1	[more]
A0A151R6Q7	1.1e-25	94.12	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_040463 PE=4 SV=1	[more]
A0A151RN55	1.1e-25	91.55	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_034569 PE=4 SV=1	[more]
A0A6A6K2E6	1.1e-25	94.37	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_043867 PE=4 SV=1	[more]
A0A151R6X5	1.5e-24	91.18	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_040453 PE=4 SV=1	[more]

BLAST of Clc11G07830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G07830.1	Clc11G07830.1	mRNA