Clc11G06480 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G06480
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOB domain-containing protein
LocationClcChr11: 6343704 .. 6344786 (+)
RNA-Seq ExpressionClc11G06480
SyntenyClc11G06480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTGGTTCTCTTTTCCCCCTTTTATGTTGTTTGATAAAGGGAGATGAAGGAGAAATTATGAACAGTAGAAAGAGATAGAAAAAGGAGAGGTTTTTATGAGAAATGTACAAAAGAGAACATAGAGTACTAAAGAGTGTAGGGTATTTTTGCAGATTCCGAAACTATCATTTTCACTTCACAAAGCTGAAAACCAACTTTCCAGTAAATTTGGGGTCTTTTTTTTTTTTTACATTATTTTTACTTTCTTCATACAGATCATCAATATCTTGCTTTATGTATCAAATATGATGTCTCATCCTAAGTTAGGAGCACAAATAATGCCACCCCATGTTCTTTAATTCCCACTTTCTGAAAAATCAATTAAAAGTGTTTCTTCTTTTCCCTTGAATAGTCTCTTTCAAACTTTCAATTCTGCATTTACTCTTCAAACCCCATAACCAAATTTAGGCCCCACCCCTTGTTTTTTTATTACTCTAATCACAAATCACCACCAAATCCCTTCATATATAAATACACATCCTTTGTTGTAAAGAAGATGACATTGTTTTAGCATTAACATAATGAAGCAAGAGCAGGCATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCACAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATTGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA

mRNA sequence

ATGGAGATTCCGAAACTATCATTTTCACTTCACAAAGCTGAAAACCAACTTTCCACAAGAGCAGGCATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCACAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATTGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA

Coding sequence (CDS)

ATGGAGATTCCGAAACTATCATTTTCACTTCACAAAGCTGAAAACCAACTTTCCACAAGAGCAGGCATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCACAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATTGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA

Protein sequence

MEIPKLSFSLHKAENQLSTRAGMRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA
Homology
BLAST of Clc11G06480 vs. NCBI nr
Match: XP_038885630.1 (LOB domain-containing protein 21 [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 5.4e-82
Identity = 160/174 (91.95%), Postives = 162/174 (93.10%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANDSS 120

Query: 143 ----NTSSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 189
               N SSSSSS ENCVVNMSYGG S S+GQSSSDITQYGYLCDF+HFPYPFKA
Sbjct: 121 HHNLNVSSSSSSFENCVVNMSYGGLSFSAGQSSSDITQYGYLCDFNHFPYPFKA 174

BLAST of Clc11G06480 vs. NCBI nr
Match: XP_004138415.1 (LOB domain-containing protein 21 [Cucumis sativus] >KAE8646568.1 hypothetical protein Csa_005704 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 158/172 (91.86%), Postives = 162/172 (94.19%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAN--- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAN   
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANNNT 120

Query: 143 --TSSSSSSLENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 189
             +SSSSS +ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSSCVENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

BLAST of Clc11G06480 vs. NCBI nr
Match: KAA0055025.1 (LOB domain-containing protein 21-like [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 160/171 (93.57%), Postives = 162/171 (94.74%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSSS--LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 189
           SSSSSS   ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 171

BLAST of Clc11G06480 vs. NCBI nr
Match: XP_008441477.1 (PREDICTED: LOB domain-containing protein 21-like [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 3.3e-79
Identity = 160/172 (93.02%), Postives = 162/172 (94.19%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSSS---LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 189
           SSSSSS    ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

BLAST of Clc11G06480 vs. NCBI nr
Match: KAG6578457.1 (LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77
Identity = 157/186 (84.41%), Postives = 164/186 (88.17%), Query Frame = 0

Query: 15  NQLSTRAGMRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASN 74
           N +   A MRG HETRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASN
Sbjct: 87  NAVQKGAAMRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASN 146

Query: 75  VSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARL 134
           VSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+AKARL
Sbjct: 147 VSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARL 206

Query: 135 ARYA---------NTSSSSSS---LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHF 189
           ARYA         ++SSSSSS   LENCVVNM YGG SI++GQSSS ITQYGYLCDF+HF
Sbjct: 207 ARYADSDHNYSTFSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHF 266

BLAST of Clc11G06480 vs. ExPASy Swiss-Prot
Match: Q9SRL8 (LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.5e-45
Identity = 94/124 (75.81%), Postives = 106/124 (85.48%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HE RSSSSCAACKLLKRRC PTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSS 142
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL  ++  ++
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNN 120

Query: 143 SSSS 147
           S  S
Sbjct: 121 SQVS 123

BLAST of Clc11G06480 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENC 150
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +    +++ ++ 
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 151 VVNMSYG 158
            +N+  G
Sbjct: 126 GINLLAG 132

BLAST of Clc11G06480 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.6e-34
Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           SSS CAACK L+R+C   C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 4   SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDA 63

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Sbjct: 64  VNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

BLAST of Clc11G06480 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.6e-34
Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 0

Query: 32  SSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTV 91
           +S CAACK L+R+C+P CIFAPYF  +EP KFA VHK+FGASNV+K+L E+   QRED V
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 92  NSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENCV 151
           NSLAYEAEAR+RDPVYGC+GAI+ LQ ++  LQ +L  A A LA Y  ++S++ +  N V
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGNVV 128

BLAST of Clc11G06480 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 145.2 bits (365), Expect = 7.4e-34
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C   C+FAPYF  +EP KFA VH++FGASNVSKIL EV   QRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA 139
           VNSLAYEAEARL+DPVYGC+GAI++LQ +++ LQ +L    A L RYA
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

BLAST of Clc11G06480 vs. ExPASy TrEMBL
Match: A0A5A7UN14 (LOB domain-containing protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001800 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 160/171 (93.57%), Postives = 162/171 (94.74%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSSS--LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 189
           SSSSSS   ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 171

BLAST of Clc11G06480 vs. ExPASy TrEMBL
Match: A0A1S3B334 (LOB domain-containing protein 21-like OS=Cucumis melo OX=3656 GN=LOC103485585 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 160/172 (93.02%), Postives = 162/172 (94.19%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSSS---LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 189
           SSSSSS    ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

BLAST of Clc11G06480 vs. ExPASy TrEMBL
Match: A0A6J1JS05 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111489259 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.6e-77
Identity = 156/182 (85.71%), Postives = 160/182 (87.91%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HETRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+AKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 143 --NTSSSSSS----------LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPF 189
             NT SSSSS          LENCVVNM YGG SI++GQSSS ITQYGYLCDF+HFPYPF
Sbjct: 121 NYNTFSSSSSSSSSPSSLGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPF 180

BLAST of Clc11G06480 vs. ExPASy TrEMBL
Match: A0A6J1FKB9 (LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111445010 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.2e-76
Identity = 154/179 (86.03%), Postives = 160/179 (89.39%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HETRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+AKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 143 ------NTSSSSSS---LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 189
                 ++SSSSSS   LENCVVNM YGG SI++GQSSS ITQYGYLCDF+HFPYP KA
Sbjct: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 179

BLAST of Clc11G06480 vs. ExPASy TrEMBL
Match: A0A6J1JJ75 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111487426 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75
Identity = 154/178 (86.52%), Postives = 159/178 (89.33%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG H+TRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120

Query: 143 -NTSSSSSS-------LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 189
            NTSSSSSS       LE+CVVNMSYGG S  SGQSS DI+QYGYLCDF+HFPYPF+A
Sbjct: 121 NNTSSSSSSSSSSLGVLESCVVNMSYGGLSF-SGQSSDDISQYGYLCDFTHFPYPFQA 177

BLAST of Clc11G06480 vs. TAIR 10
Match: AT3G11090.1 (LOB domain-containing protein 21 )

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-46
Identity = 94/124 (75.81%), Postives = 106/124 (85.48%), Query Frame = 0

Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HE RSSSSCAACKLLKRRC PTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSS 142
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL  ++  ++
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNN 120

Query: 143 SSSS 147
           S  S
Sbjct: 121 SQVS 123

BLAST of Clc11G06480 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.2e-36
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENC 150
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +    +++ ++ 
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 151 VVNMSYG 158
            +N+  G
Sbjct: 126 GINLLAG 132

BLAST of Clc11G06480 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.2e-36
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENC 150
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +    +++ ++ 
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 151 VVNMSYG 158
            +N+  G
Sbjct: 126 GINLLAG 132

BLAST of Clc11G06480 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.2e-36
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENC 150
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +    +++ ++ 
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 151 VVNMSYG 158
            +N+  G
Sbjct: 126 GINLLAG 132

BLAST of Clc11G06480 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.2e-36
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = 0

Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENC 150
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +    +++ ++ 
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 151 VVNMSYG 158
            +N+  G
Sbjct: 126 GINLLAG 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038885630.15.4e-8291.95LOB domain-containing protein 21 [Benincasa hispida][more]
XP_004138415.11.1e-7991.86LOB domain-containing protein 21 [Cucumis sativus] >KAE8646568.1 hypothetical pr... [more]
KAA0055025.12.5e-7993.57LOB domain-containing protein 21-like [Cucumis melo var. makuwa][more]
XP_008441477.13.3e-7993.02PREDICTED: LOB domain-containing protein 21-like [Cucumis melo][more]
KAG6578457.13.1e-7784.41LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia... [more]
Match NameE-valueIdentityDescription
Q9SRL82.5e-4575.81LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 S... [more]
O044791.1e-3455.12Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Q9FKZ32.6e-3464.49LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S... [more]
Q9FML42.6e-3460.00Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... [more]
Q8L8Q37.4e-3463.89LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A5A7UN141.2e-7993.57LOB domain-containing protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3B3341.6e-7993.02LOB domain-containing protein 21-like OS=Cucumis melo OX=3656 GN=LOC103485585 PE... [more]
A0A6J1JS059.6e-7785.71LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC11148925... [more]
A0A6J1FKB98.2e-7686.03LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111445... [more]
A0A6J1JJ752.4e-7586.52LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC11148742... [more]
Match NameE-valueIdentityDescription
AT3G11090.11.8e-4675.81LOB domain-containing protein 21 [more]
AT1G65620.18.2e-3655.12Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.28.2e-3655.12Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.38.2e-3655.12Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.48.2e-3655.12Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..140
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 23..151
NoneNo IPR availablePANTHERPTHR31301:SF24LOB DOMAIN-CONTAINING PROTEIN 21coord: 23..151
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 34..131
e-value: 1.7E-38
score: 131.2
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 33..134
score: 25.397135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G06480.2Clc11G06480.2mRNA