Clc11G05540 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G05540
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ATP-dependent zinc metalloprotease FtsH
Location	ClcChr11: 5367237 .. 5373463 (+)
RNA-Seq Expression	Clc11G05540
Synteny	Clc11G05540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTTTCTGCTTCAGTTTCTATTGTTTTGGGGCTGTGCTATTTGTTTCTGAAAATAACAGCAGTCCCACCTTCCAAGAGTGTTCCATATTCAGATTTCATTACCAGCCTTCAGAATGGAACTGTCACCAAAGTTTTACTCGAGGAGGGGTCTCGTCGTATATATTTTAATCGAAGTTTTACGGAGTCGATTCAAGGTTTAGATAGCAAACCATTATCAGTAGCAGTAGATAGTTCTAATGGAAGTGATAAGGGAATGAATGATGACTCAAGAACTGTTCAAGCCCCAAGAACGAATTTATTGACAAAAATTTCTAGAAGGAAAAGCCGTGTTCCGATTCCTGAGTGGCAATTCTCGACTAGGAAAGTAGATCATGATGAAAAGTTTCTGCTTGGTTTGATGAGAGAAAAGGGAACTACTTACAGTTCAGCACCTCAATCGGTTTTGATGTCGATGAGAACTACATTGATAACGATCATATCTCTATGGATTCCTTTAATTCCTCTCATGTGGCTTCTCTATCGTCAACTTTCTGCGTCAAATACAACTGTGAGAAAGCGCCAACCGAACAGCCCCATGGTTGGATTTGAAGATGTGGAAGGCGTGGATGGTGCTAAAGTGGAGCTCATGGAGGTAAGGTATTTAAAATTATGTTCATACATCTGACAATCTTTCCCCTTCATCTACTAATTTAGCATGCCATTTTACGTGTTTGGTTTCAACGTAGGAGATTGAAAATTGATTTTCTGATTTGTCCTTAGCATTGTACTAGATGTTATATGTTCTTATTTTGAACCAGCTTCTCTTAATTAATTGTAGGTTGTAAGGTTAAAATGTTGTTTTAGTTCTTGAATTTTGACTTGTTTTCCTTTTCCATCAAAGTTCCTATTTAGTCCTACCGGCTACAAGATAATTTCGACGTTTAATCTTTGACAGGAACTAAAGTAGAAAAGAAATCAAAGACAACTATTTTCGTAATCTGTTTTTATATGTTAAGCATTGAAGCAGAAACTTTCTTTTTCTCTATTGACTAAATTTATCATCATAGGTAGTATCATGCCTTCAAGGAGCTACGAACTACCAAAAACTAGGAGCAAAGCTTCCTAAAGGTGTCCTGTTAGTAGGTCCTCCTGGAACAGGGAAAACGCTCCTTGCACGAGCTGTGGCAGGAGAAGCCGGTGTTCCGTTTTTCAGTGTATCTGCCAGTGAATTTGTTGAAATGTTTGTTGGAAGAGGGGCAGCACGTATTAGAGACCTTTTTAACGTGGCAAGAAAATGTGCACCATCAATCATATTCATCGATGAACTTGATGCGGTCGGAGGGAAACGGGGTAGAAGTTTCAATGATGAACGAGACCAAACATTGAACCAGGTAATCTCCAGTTAAAATGTGAAGCACCCCACTCTCTTTGCTCAACACTTTTCAGTAAAAATTCCATGATCCGACTTAATTTACTCCTTTCTAATTACCATAGTTGTTGACCGAAATGGATGGATTCGAGTTGGATATGAAAGTGATTGTTATAGCAGCAACTAACAGACCCGAAGCATTGGATCCCGCCCTATGTAGACCAGGTAGATTCTCAAGAAAAGTCCTCGTAGGCGAGCCCGATGAAGAAGGAAGGAGAAAAATCTTGGCAGTACATTTAAGAGAAGTTCCGCTCGAGGAAGACCTCAACTTAATCTGCAGTCTAGTAGCAGCACTCACACCTGGTTATGTAGGCGCTGATCTTGCAAATATCATTAACGAAGCTGCACTACTCGCTGCTCGTAGAGGTCAGTCGTCGTTCTCGTTATACACAAACTAATTAGTTCCAGTTTCCGACTTGGAACACAAACTGTATGAGTTTTTTTTAGCAATCCCGGGGGCATCATTCGAGTTCTTTCTTCTCTTTTTTGAAGGTGGCGAAACGATATCGAGGGAAGATTTAATGGGAGCTATTGAAAGATCAAAATTTGGGATCAACAGCAAGCAACTGAGATCTAATAAAATAAGCAATGAACTTGAAAAACTTTTTCCATGGATGACATCTCTAATGGGAAGAAATGACAAAAAAGTTGATCCATCACAAGGGCCATTAGGCTATCAAACTTTGAGCTGATTGATATGATTTATGCATGTTGTATCAAACATATAGATTCATACTTGCATAAACCACATTTGATACTGTAGATAAATTTCTTGTCCCATTTTAATGTAGTATCAACAAATTCTTAACTATATCCAAATTTTGATTTCAAACAAACTATATCCTAGTGAGTTTAGCTCGAACTTAATTGGCGTGACCTTCTTTAGTCCAAAGGTTCGAACTCCTGTTTCCATAATTGTTGTACTACAAATAAGCAAAATAACTATTTTTAATAAAATTATAAAAGTTAAAGAATTTAAAAATATATTTAAATTATTATATGAACGTGATTTTTAAACAAGTTAAAATACTTATTATTTAATATTATATTGACATCATGACGTTGTGTTGCTTATATTTTATGTTTTGTGGATTTTATACAATACAATAAAAATATCGATTCATCCTTCACGTCGATCTCGAACTCATAGAAATGTTAAAATATTGGTATGGTGACAAAAATTTAATACTATGACTTTCATGCTTTTTTATGATATAATAGTATGTAGATTCCACTCTTAATCATGTCGATGTCTAACCCATGGAAATGTAAAAATATTGATGTGTCGATAGAAATTTAATATTATGAATGTACTAATTAAATTATAATTTAAATACTAAAAGAAAATCACTTAATTTTTTTATTTAGAAAAAACCACTATTATATATATATATATATATATATTATGGCGTCCATTAGTTCTTTTTAGATAAGAGATCTATTATTGACCAAAAGGTTAATTTTTTTTTTTTTTAAAAAAAGAAGTCATTAATAATTAATTATAATTTAAATATTAAAATACCACTTTTTTAGAAGATAATCAATCTAATATTTTATTCTTTACAAAATTAAAAAAGAAACCAAGAAAAGGTCCAAAATATACATATTAGTTCGAATTTTAAATATTTCAAGAACAAAAAAGTTCAAATTCTAAATATTACAAGAAAAAAAGAAGTTCAATTCTAAAATGAATTGATACTAATTATAGCCTCTTTTGTTTTTTTAGTACAATAACTTTAAGTGGAAGATTGGATCGAAAAGTAATTTGAGCTAAGTTCATTTCAACCAATTAGTAATAATTAAGTTTGTCAAAAAAAAAAAAAATTCAAATTTGCAAAACAAATATGGCAAAGGCAAAAGCATATTAAAATGCCATTCTAAACTTATGTTTGAATATAAATATGCATATGAACCCTCATTTCCATAATTTTGGGTACAAATGACACATTTAAGGTAATTCATTTAATGAAAATCCAAACGTTTGATTTGATTTGATTACGTAAATGTAAGAATTTAATTGGTAAAATTATAGGAATACTACACAATATTTATAAAAGAAAAACATAATAAAGATGTAAATCGATACATTACAAAAGCAACCCATTTTTATTGGCAAAAAAGGCTAATGAGCCATGTGAGACCTTTTTTTTTTTGAAGGCTCTTACATAATGCTAGCTTTATTCAATAGAGGGAAAAGAAAAAATCTAAGGGAAAAACAAAATTGAGGGGAGCCTTTGAAAAAAATCTCAAAAAAACATGAAACTGGAGACATTTTCATTTGTTAATTGCATCCTTAACCGCATCAGCGGCCCCTTGCGCCTTCTCCTTCACCTGTTGTCCTGTTTCTTGTATTGATTCTTTAGTTGATTGCGCTGCATCACTTGCCTTGTCCATCAAATTGCTCGCCTTTTCCTACGTAAGAACACAAACTAATATGTCACCCTATCACTCCTTAATCACACAAACATAAACCAAACATGGGGTGTTGTCCAACAACAACCAATAAAAGCAATATGAAACCTATGAAATAAAATAATAAAAAGTGACGTTGAGAAATAACACAAAACTCATTTAGAATGAAATTATTATAATGAACAATTGTTACCACATTCATTTTATATTCAATTATATCACAAAATATTAAAAATAATGTAACATATAATTGATATTAAATGACGACATAGTTAAATTTAAATAATAATGACTAAGTGAACCTGAGCTTGACCCTTGGCTTCCCCGGCATGATAGCTCAACTTTTGGGAGTTATCCATTATTTTATAATGAATTTAGAAATCACAAGAAGGAGGTTAGAACTTGTGAGGAAATTAGACTTGTTGGGAGTTATATAGTACTTGGAAATTACCCAATCACACAACTTGAATGCAATGCCACCAAAGTAAGTAAATTTTGCTTTTGCCACGTGTTAGGTTGTGATTTGTTTAGGAGTGACACTTGTCATATGATGTTTGAATTGTTCTATAATTAAATTGGGGCCAATTGACCAGGTTTAATCAAGAGTTTGAGAAATGTTCAACATTCTCCACAAAAGTTGGCTTGGCTTCCTTTTTTTAGAGTGTTTTATGTCAATATTGTTTATTCATAAATGGAAAGTCCTCTTCACAACCCAAACCATATATTTAAAATTTGAAAAAAAAAAAAAACAAAAAAACAAAACATATAAATATTCTTGAAAAGTTTTTACGAAAATTTTATAACTTTTATCTTGGTTGAATATCTCGCTACCACATAACGGAGGGATCAGTAGGTGTATCGAAATGTCTCAACTAGATTAACACATTCTTAATGCTCTCATTGTGCCTTGAATTAGATACATTCAAAAGTAGTAATCAGTACAAAAAGAGTGGAAGAGAAGCTCGGGGATACAAAAGGCAAGAGTGATGAAGCCGATAACAAAAGAAATGCAATGAAGAAGAATTACAAGAAAAAAATATATATATATTTGACCTATCTTGTCTAATATTTTGAATTTTTGTTTTTAAAAAATATATATTTTGAATTTTTTGTATTCATTTATTTTATTTTGTTTGTTTCCCCAATTTTAGATGAGTTGTTAGTGTTTTGGCTTTAAATATGGGGTTTCACCCTCCTCCAACATTACAACATTTTCTTACCTATATCTTCATCAGTCGTGTTTAATGGAGAAGTTGGAATGTAAAAGGAGGATTATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGGTAATATTCTCCAAACTTACTATTTGCAATTTGCCCGTTTGTAGGCTGGTATGTAAAACTTGGAATCATCTAGTTTTAGATTACACTTCGTCTCTTAAATTTGTTCCGAATGTTTTCCTTGTTAGTACCTATGATATCCTCTTCAATCGCAATTGCAATTGTCATCCTCGTTGTTTTCCTTCTTTTAAGTGTAATCCCAAGATGCATTGTCTTGATATCGATACCATGAGTTACGTTGCCTCCTTTGTGTTTGACAAAAATGATTGGCCTAAGATCCAAATTTTCAATTCCTGCAATGGATTGTTGTATATTTACAAATATAGTGACCATGACGGTTGTTGCAACGGCATATTAAATCTGATGACTAATGAGTTCTTCAAACTACCTCAACCTAAAGTAAAAAATAAGAATATTCATTGTGTCTACGGATTCGGTTTTAGTTGTAAGACGAAACAGTATAAATTGTTCAAAGCTATCCATGAACAAGGAGACTCTCATTCCATGATGGAGATTATGAGGTTTGGTAGGAATGAAACCAAGGAATGGAGACACTTTGATTGCATGCCTTTTGTGTTCTACTATCATGGTGCTTACCTGAATGGAGTTATATATTGGATCGGAAGAGAAAAAGAAAATAAGTTTGTGATTTACGGTCTTGATGTTGAAACTGAAAAAATTGAATCGATTACGGTTTTAGAAGTTGGCCTATACTCCTCCAATCATGGGTATATTGGGAAATTTAATGGCAGCCTTTATGCAACTATATCCATCCATGGAACATGTTGTAAGAAGGTTCAATTATGGATTATGCAAGGTAAAGATTCATGGATTAAAGAATGTGTTATATATGACATGTTAATTTATGGGATAGATGGATTTCTTCAGCTCATTAAGGTGTTTGAAGATGGAGAAAGATGGTTTCTTGTCCGTGATCAAATCTTTTGCTTCGATAAGACTGGGACGAAAATCAAGATAAAGAATTGGAACCGAAAGGATAGAGGTAAACAATTCATTGCAGGATTTTGTCAAATAGAATCCTTTAATTTTAGATCTCTCCAAAACATTTTGGCCGGAGAGGACATATGA

mRNA sequence

ACCCTTTCTGCTTCAGTTTCTATTGTTTTGGGGCTGTGCTATTTGTTTCTGAAAATAACAGCAGTCCCACCTTCCAAGAGTGTTCCATATTCAGATTTCATTACCAGCCTTCAGAATGGAACTGTCACCAAAGTTTTACTCGAGGAGGGGTCTCGTCGTATATATTTTAATCGAAGTTTTACGGAGTCGATTCAAGGTTTAGATAGCAAACCATTATCAGTAGCAGTAGATAGTTCTAATGGAAGTGATAAGGGAATGAATGATGACTCAAGAACTGTTCAAGCCCCAAGAACGAATTTATTGACAAAAATTTCTAGAAGGAAAAGCCGTGTTCCGATTCCTGAGTGGCAATTCTCGACTAGGAAAGTAGATCATGATGAAAAGTTTCTGCTTGGTTTGATGAGAGAAAAGGGAACTACTTACAGTTCAGCACCTCAATCGGTTTTGATGTCGATGAGAACTACATTGATAACGATCATATCTCTATGGATTCCTTTAATTCCTCTCATGTGGCTTCTCTATCGTCAACTTTCTGCGTCAAATACAACTGTGAGAAAGCGCCAACCGAACAGCCCCATGGTTGGATTTGAAGATGTGGAAGGCGTGGATGGTGCTAAAGTGGAGCTCATGGAGGTAGTATCATGCCTTCAAGGAGCTACGAACTACCAAAAACTAGGAGCAAAGCTTCCTAAAGGTGTCCTGTTAGTAGGTCCTCCTGGAACAGGGAAAACGCTCCTTGCACGAGCTGTGGCAGGAGAAGCCGGTGTTCCGTTTTTCAGTGTATCTGCCAGTGAATTTGTTGAAATGTTTGTTGGAAGAGGGGCAGCACGTATTAGAGACCTTTTTAACGTGGCAAGAAAATGTGCACCATCAATCATATTCATCGATGAACTTGATGCGGTCGGAGGGAAACGGGGTAGAAGTTTCAATGATGAACGAGACCAAACATTGAACCAGTTGTTGACCGAAATGGATGGATTCGAGTTGGATATGAAAGTGATTGTTATAGCAGCAACTAACAGACCCGAAGCATTGGATCCCGCCCTATGTAGACCAGGTAGATTCTCAAGAAAAGTCCTCGTAGGCGAGCCCGATGAAGAAGGAAGGAGAAAAATCTTGGCAGTACATTTAAGAGAAGTTCCGCTCGAGGAAGACCTCAACTTAATCTGCAGTCTAGTAGCAGCACTCACACCTGGTTATGTAGGCGCTGATCTTGCAAATATCATTAACGAAGCTGCACTACTCGCTGCTCGTAGAGCGGCCCCTTGCGCCTTCTCCTTCACCTGTTGTCCTGTTTCTTGTATTGATTCTTTAGTTGATTGCGCTGCATCACTTGCCTTGTCCATCAAATTGCTCGCCTTTTCCTACTCGTGTTTAATGGAGAAGTTGGAATGTAAAAGGAGGATTATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGGTAATATTCTCCAAACTTACTATTTGCAATTTGCCCGTTTGTAGGCTGGTATGTAAAACTTGGAATCATCTAGTTTTAGATTACACTTCGTCTCTTAAATTTGTTCCGAATGTTTTCCTTGTTAGTACCTATGATATCCTCTTCAATCGCAATTGCAATTGTCATCCTCGTTGTTTTCCTTCTTTTAAGTGTAATCCCAAGATGCATTGTCTTGATATCGATACCATGAGTTACGTTGCCTCCTTTGTGTTTGACAAAAATGATTGGCCTAAGATCCAAATTTTCAATTCCTGCAATGGATTGTTGTATATTTACAAATATAGTGACCATGACGGTTGTTGCAACGGCATATTAAATCTGATGACTAATGAGTTCTTCAAACTACCTCAACCTAAAGTAAAAAATAAGAATATTCATTGTGTCTACGGATTCGGTTTTAGTTGTAAGACGAAACAGTATAAATTGTTCAAAGCTATCCATGAACAAGGAGACTCTCATTCCATGATGGAGATTATGAGGTTTGGTAGGAATGAAACCAAGGAATGGAGACACTTTGATTGCATGCCTTTTGTGTTCTACTATCATGGTGCTTACCTGAATGGAGTTATATATTGGATCGGAAGAGAAAAAGAAAATAAGTTTGTGATTTACGGTCTTGATGTTGAAACTGAAAAAATTGAATCGATTACGGTTTTAGAAGTTGGCCTATACTCCTCCAATCATGGGTATATTGGGAAATTTAATGGCAGCCTTTATGCAACTATATCCATCCATGGAACATGTTGTAAGAAGGTTCAATTATGGATTATGCAAGGTAAAGATTCATGGATTAAAGAATGTGTTATATATGACATGTTAATTTATGGGATAGATGGATTTCTTCAGCTCATTAAGGTGTTTGAAGATGGAGAAAGATGGTTTCTTGTCCGTGATCAAATCTTTTGCTTCGATAAGACTGGGACGAAAATCAAGATAAAGAATTGGAACCGAAAGGATAGAGGTAAACAATTCATTGCAGGATTTTGTCAAATAGAATCCTTTAATTTTAGATCTCTCCAAAACATTTTGGCCGGAGAGGACATATGA

Coding sequence (CDS)

ATGAATGATGACTCAAGAACTGTTCAAGCCCCAAGAACGAATTTATTGACAAAAATTTCTAGAAGGAAAAGCCGTGTTCCGATTCCTGAGTGGCAATTCTCGACTAGGAAAGTAGATCATGATGAAAAGTTTCTGCTTGGTTTGATGAGAGAAAAGGGAACTACTTACAGTTCAGCACCTCAATCGGTTTTGATGTCGATGAGAACTACATTGATAACGATCATATCTCTATGGATTCCTTTAATTCCTCTCATGTGGCTTCTCTATCGTCAACTTTCTGCGTCAAATACAACTGTGAGAAAGCGCCAACCGAACAGCCCCATGGTTGGATTTGAAGATGTGGAAGGCGTGGATGGTGCTAAAGTGGAGCTCATGGAGGTAGTATCATGCCTTCAAGGAGCTACGAACTACCAAAAACTAGGAGCAAAGCTTCCTAAAGGTGTCCTGTTAGTAGGTCCTCCTGGAACAGGGAAAACGCTCCTTGCACGAGCTGTGGCAGGAGAAGCCGGTGTTCCGTTTTTCAGTGTATCTGCCAGTGAATTTGTTGAAATGTTTGTTGGAAGAGGGGCAGCACGTATTAGAGACCTTTTTAACGTGGCAAGAAAATGTGCACCATCAATCATATTCATCGATGAACTTGATGCGGTCGGAGGGAAACGGGGTAGAAGTTTCAATGATGAACGAGACCAAACATTGAACCAGTTGTTGACCGAAATGGATGGATTCGAGTTGGATATGAAAGTGATTGTTATAGCAGCAACTAACAGACCCGAAGCATTGGATCCCGCCCTATGTAGACCAGGTAGATTCTCAAGAAAAGTCCTCGTAGGCGAGCCCGATGAAGAAGGAAGGAGAAAAATCTTGGCAGTACATTTAAGAGAAGTTCCGCTCGAGGAAGACCTCAACTTAATCTGCAGTCTAGTAGCAGCACTCACACCTGGTTATGTAGGCGCTGATCTTGCAAATATCATTAACGAAGCTGCACTACTCGCTGCTCGTAGAGCGGCCCCTTGCGCCTTCTCCTTCACCTGTTGTCCTGTTTCTTGTATTGATTCTTTAGTTGATTGCGCTGCATCACTTGCCTTGTCCATCAAATTGCTCGCCTTTTCCTACTCGTGTTTAATGGAGAAGTTGGAATGTAAAAGGAGGATTATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGGTAATATTCTCCAAACTTACTATTTGCAATTTGCCCGTTTGTAGGCTGGTATGTAAAACTTGGAATCATCTAGTTTTAGATTACACTTCGTCTCTTAAATTTGTTCCGAATGTTTTCCTTGTTAGTACCTATGATATCCTCTTCAATCGCAATTGCAATTGTCATCCTCGTTGTTTTCCTTCTTTTAAGTGTAATCCCAAGATGCATTGTCTTGATATCGATACCATGAGTTACGTTGCCTCCTTTGTGTTTGACAAAAATGATTGGCCTAAGATCCAAATTTTCAATTCCTGCAATGGATTGTTGTATATTTACAAATATAGTGACCATGACGGTTGTTGCAACGGCATATTAAATCTGATGACTAATGAGTTCTTCAAACTACCTCAACCTAAAGTAAAAAATAAGAATATTCATTGTGTCTACGGATTCGGTTTTAGTTGTAAGACGAAACAGTATAAATTGTTCAAAGCTATCCATGAACAAGGAGACTCTCATTCCATGATGGAGATTATGAGGTTTGGTAGGAATGAAACCAAGGAATGGAGACACTTTGATTGCATGCCTTTTGTGTTCTACTATCATGGTGCTTACCTGAATGGAGTTATATATTGGATCGGAAGAGAAAAAGAAAATAAGTTTGTGATTTACGGTCTTGATGTTGAAACTGAAAAAATTGAATCGATTACGGTTTTAGAAGTTGGCCTATACTCCTCCAATCATGGGTATATTGGGAAATTTAATGGCAGCCTTTATGCAACTATATCCATCCATGGAACATGTTGTAAGAAGGTTCAATTATGGATTATGCAAGGTAAAGATTCATGGATTAAAGAATGTGTTATATATGACATGTTAATTTATGGGATAGATGGATTTCTTCAGCTCATTAAGGTGTTTGAAGATGGAGAAAGATGGTTTCTTGTCCGTGATCAAATCTTTTGCTTCGATAAGACTGGGACGAAAATCAAGATAAAGAATTGGAACCGAAAGGATAGAGGTAAACAATTCATTGCAGGATTTTGTCAAATAGAATCCTTTAATTTTAGATCTCTCCAAAACATTTTGGCCGGAGAGGACATATGA

Protein sequence

MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAALLAARRAAPCAFSFTCCPVSCIDSLVDCAASLALSIKLLAFSYSCLMEKLECKRRIMNINWGPGVPPNVVKVIFSKLTICNLPVCRLVCKTWNHLVLDYTSSLKFVPNVFLVSTYDILFNRNCNCHPRCFPSFKCNPKMHCLDIDTMSYVASFVFDKNDWPKIQIFNSCNGLLYIYKYSDHDGCCNGILNLMTNEFFKLPQPKVKNKNIHCVYGFGFSCKTKQYKLFKAIHEQGDSHSMMEIMRFGRNETKEWRHFDCMPFVFYYHGAYLNGVIYWIGREKENKFVIYGLDVETEKIESITVLEVGLYSSNHGYIGKFNGSLYATISIHGTCCKKVQLWIMQGKDSWIKECVIYDMLIYGIDGFLQLIKVFEDGERWFLVRDQIFCFDKTGTKIKIKNWNRKDRGKQFIAGFCQIESFNFRSLQNILAGEDI

Homology

[Close]

BLAST of Clc11G05540 vs. NCBI nr
Match: XP_038890854.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 630.2 bits (1624), Expect = 2.4e-176
Identity = 323/334 (96.71%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MND+SRT QAPR NLLTKISRRKSRV IPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP
Sbjct: 239 MNDESRTGQAPRMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 298

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT RKRQPNSPMVGFEDVEGVDGA
Sbjct: 299 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTARKRQPNSPMVGFEDVEGVDGA 358

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 359 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 418

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 419 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 478

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLR+VPLEED
Sbjct: 479 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLRDVPLEED 538

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NEAALLAARR
Sbjct: 539 LNLICSLVAALTPGYVGADLANIVNEAALLAARR 572

[Close]

BLAST of Clc11G05540 vs. NCBI nr
Match: XP_008459447.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 4.0e-176
Identity = 322/334 (96.41%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MN+DSRTVQAP+ NLLTKISRRKSRV IPEWQFSTRKVDHDEKFLL LMREKGTTYSSAP
Sbjct: 239 MNEDSRTVQAPKMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLSLMREKGTTYSSAP 298

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KRQPNSPMVGFEDVEGVDGA
Sbjct: 299 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDGA 358

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 359 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 418

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 419 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 478

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED
Sbjct: 479 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 538

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NEAALLAARR
Sbjct: 539 LNLICSLVAALTPGYVGADLANIVNEAALLAARR 572

[Close]

BLAST of Clc11G05540 vs. NCBI nr
Match: KAA0039402.1 (putative inactive ATP-dependent zinc metalloprotease FTSHI 3 [Cucumis melo var. makuwa] >TYK00590.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 3 [Cucumis melo var. makuwa])

HSP 1 Score: 629.4 bits (1622), Expect = 4.0e-176
Identity = 322/334 (96.41%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MN+DSRTVQAP+ NLLTKISRRKSRV IPEWQFSTRKVDHDEKFLL LMREKGTTYSSAP
Sbjct: 178 MNEDSRTVQAPKMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLSLMREKGTTYSSAP 237

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KRQPNSPMVGFEDVEGVDGA
Sbjct: 238 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDGA 297

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 298 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 357

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 358 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 417

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED
Sbjct: 418 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 477

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NEAALLAARR
Sbjct: 478 LNLICSLVAALTPGYVGADLANIVNEAALLAARR 511

[Close]

BLAST of Clc11G05540 vs. NCBI nr
Match: XP_004141600.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Cucumis sativus] >KGN52548.1 hypothetical protein Csa_008008 [Cucumis sativus])

HSP 1 Score: 629.0 bits (1621), Expect = 5.2e-176
Identity = 322/334 (96.41%), Postives = 329/334 (98.50%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           M++DSRTVQAPRTNLLTKISRRKSRV IPEWQFSTRKVD DEKFLLGLMREKGTTYSSAP
Sbjct: 239 MSEDSRTVQAPRTNLLTKISRRKSRVAIPEWQFSTRKVDRDEKFLLGLMREKGTTYSSAP 298

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KRQPNSPMVGFEDVEGVDGA
Sbjct: 299 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDGA 358

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 359 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 418

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 419 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 478

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED
Sbjct: 479 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 538

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NE+ALLAARR
Sbjct: 539 LNLICSLVAALTPGYVGADLANIVNESALLAARR 572

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BLAST of Clc11G05540 vs. NCBI nr
Match: XP_022134380.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 611.7 bits (1576), Expect = 8.7e-171
Identity = 311/334 (93.11%), Postives = 323/334 (96.71%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MND+S TVQ+PR NLLTKISRR+SR   PEWQFSTRKVD DEKFLL LMREKGTTYSSAP
Sbjct: 240 MNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAP 299

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KR+PNSPMVGF+DVEGVDGA
Sbjct: 300 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGA 359

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 360 KVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 419

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 420 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 479

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+ED
Sbjct: 480 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKED 539

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNL+CSLVA+LTPGYVGADLANI+NEAALL ARR
Sbjct: 540 LNLVCSLVASLTPGYVGADLANIVNEAALLTARR 573

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BLAST of Clc11G05540 vs. ExPASy Swiss-Prot
Match: Q9M895 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI3 PE=1 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 3.4e-146
Identity = 265/313 (84.66%), Postives = 286/313 (91.37%), Query Frame = 0


Query: 22  RKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAPQSVLMSMRTTLITIISLWIPL 81
           RK R   P W++ TRKVDHDEKFLL LMREKG TYSSAPQS LMSMRTTLITIISLWIPL
Sbjct: 244 RKVRALPPVWKYVTRKVDHDEKFLLSLMREKGITYSSAPQSALMSMRTTLITIISLWIPL 303

Query: 82  IPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGAKVELMEVVSCLQGATNYQKLG 141
            PLMWLLYRQLSASN+  +KR+  +P VGF+DVEGVD AK EL+E+VSCLQG+ NY+KLG
Sbjct: 304 TPLMWLLYRQLSASNSPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLG 363

Query: 142 AKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVAR 201
           A+LP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE+FVGRGAARIRDLFN AR
Sbjct: 364 ARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAAR 423

Query: 202 KCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALD 261
           K +PSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFE D KVIVIAATNRPEALD
Sbjct: 424 KNSPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALD 483

Query: 262 PALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGADLA 321
            ALCRPGRFSRKVLV EPD+EGRRKILA+HLR+VPLEED  LIC LVA+LTPG+VGADLA
Sbjct: 484 SALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLA 543

Query: 322 NIINEAALLAARR 335
           NI+NEAALLAARR
Sbjct: 544 NIVNEAALLAARR 556

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BLAST of Clc11G05540 vs. ExPASy Swiss-Prot
Match: D1CDT8 (ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) OX=525904 GN=ftsH PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-79
Identity = 177/344 (51.45%), Postives = 225/344 (65.41%), Query Frame = 0


Query: 7   TVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAPQSVLMS 66
           T QA +     K + +   V  P  +F T      +  L+  + +KG   +  P+S   S
Sbjct: 83  TTQADKITGEFKQAVKVPGVDQPVKRFVTHIPAFGDDQLMSQLDQKGVIVNVQPES---S 142

Query: 67  MRTTLITIISLWIPLI----PLMWLLYRQLSA--------SNTTVRKRQPNSPMVGFEDV 126
            R+ L++I+  + P I      +WL+ +  S+         +   R     S  V F+DV
Sbjct: 143 TRSLLLSILISFGPTILFFLLFLWLISKAQSSQQGLFGLGKSRAKRYNATESTRVTFDDV 202

Query: 127 EGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFF 186
            G++ AK EL E+V  L+    YQ+LG  +PKGVLL+GPPGTGKTLLARAVAGEAGVPFF
Sbjct: 203 AGIEEAKQELAEIVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGEAGVPFF 262

Query: 187 SVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFN----DERDQ 246
           S+S SEFVEM VG GAAR+R+LF  A+K AP IIF+DELDA+G +RG S N    DER+Q
Sbjct: 263 SMSGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDAIGRRRGSSINVGGHDEREQ 322

Query: 247 TLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAV 306
           TLNQLL EMDGF+    VIV+AATNRP+ LDPAL RPGRF R+V+V  PD+ GR KIL V
Sbjct: 323 TLNQLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRRVVVQRPDKVGRLKILQV 382

Query: 307 HLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           H R VPL+ +L+L  S +AA TPG VGADL N++NEAALLAARR
Sbjct: 383 HTRNVPLDPNLDL--SEIAAATPGLVGADLRNLVNEAALLAARR 421

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BLAST of Clc11G05540 vs. ExPASy Swiss-Prot
Match: D1C8C0 (ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) OX=479434 GN=ftsh4 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.0e-78
Identity = 175/316 (55.38%), Postives = 212/316 (67.09%), Query Frame = 0


Query: 32  QFSTRKVDHDEKFLLGLMREKGTT--YSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLY 91
           QF T   ++ +  L+ L++  G T     A  SV  S+   L TI+ L++  I LM  L 
Sbjct: 117 QFQTTIPENSQTELVPLLQSHGVTVKIDQAGGSVWPSL---LATIVPLFL-FIGLMVYLG 176

Query: 92  RQLSASNTTV--------RKRQPNSPMVGFEDVEGVDGAKVELMEVVSCLQGATNYQKLG 151
           R +S     V        R      P V F DV G + AK EL EVV  L+    Y  +G
Sbjct: 177 RSMSRGQQNVFSFGRSKARVYDAERPRVTFADVAGEEEAKAELSEVVDFLRNPMKYHAIG 236

Query: 152 AKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVAR 211
           A+LP+G+LLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVG GA+R+RDLF  A+
Sbjct: 237 ARLPRGILLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGVGASRVRDLFERAK 296

Query: 212 KCAPSIIFIDELDAVGGKRGRSF---NDERDQTLNQLLTEMDGFELDMKVIVIAATNRPE 271
             APSI+F+DELDAVG +R       NDER+QTLNQLL EMDGFE    VIVIAATNRP+
Sbjct: 297 ASAPSIMFVDELDAVGRQRFAGLGGGNDEREQTLNQLLVEMDGFEPHQDVIVIAATNRPD 356

Query: 272 ALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGA 331
            LDPAL RPGRF R+V VG PD  GR  IL +H R +P+ +DL+L    +AA TPG+ GA
Sbjct: 357 VLDPALLRPGRFDRQVTVGLPDRRGREAILRIHTRGIPVADDLDL--EELAAATPGFSGA 416

Query: 332 DLANIINEAALLAARR 335
           DLAN++NEAAL+AAR+
Sbjct: 417 DLANLVNEAALMAARK 426

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BLAST of Clc11G05540 vs. ExPASy Swiss-Prot
Match: B9L3S8 (ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) OX=309801 GN=ftsH2 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.5e-77
Identity = 164/275 (59.64%), Postives = 197/275 (71.64%), Query Frame = 0


Query: 71  LITIISLWIPLIPLMWLLYRQLSASNTTV--------RKRQPNSPMVGFEDVEGVDGAKV 130
           L+  +  ++ LI L++LL R LS     V        R      P V F DV G + AK 
Sbjct: 202 LLLSVLPFVFLIGLLFLLGRNLSRGQQNVFSFGRSRARVYDVERPQVTFADVAGEEEAKA 261

Query: 131 ELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFV 190
           EL +VV  L+    Y ++GA+LP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFV
Sbjct: 262 ELAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFV 321

Query: 191 EMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSF---NDERDQTLNQLLTEM 250
           EMFVG GA+R+RDLF  A+  APSIIFIDELDAVG +R       NDER+QTLNQLL EM
Sbjct: 322 EMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGNDEREQTLNQLLVEM 381

Query: 251 DGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEE 310
           DGFE    V+VIAATNRP+ LDPAL RPGRF R+V+VG PD+ GR  IL +H R +P+  
Sbjct: 382 DGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRIHTRGIPIAP 441

Query: 311 DLNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           D++L    +AA TPG+ GADLAN++NEAAL+AARR
Sbjct: 442 DVDL--EGLAAATPGFSGADLANLVNEAALVAARR 474

[Close]

BLAST of Clc11G05540 vs. ExPASy Swiss-Prot
Match: A8ZNZ4 (ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ftsH PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.6e-77
Identity = 163/299 (54.52%), Postives = 207/299 (69.23%), Query Frame = 0


Query: 49  MREKGTTYSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLYRQ-------LSASNTTVRK 108
           +RE    Y + P S L  + T L  ++   I      WL+ R        L+   +  R 
Sbjct: 106 LREHDVQYFAPPPSSLSWLPTLLGWVVPPLIFFGIWSWLINRNQGAGPAALTVGQSKARI 165

Query: 109 RQPNSPMVGFEDVEGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLL 168
               S  V F+DV GV+ AK EL+E+V  L  A  Y +LGAK+PKGVLLVGPPGTGKTLL
Sbjct: 166 YSEGSTGVTFDDVAGVEEAKTELLEIVDFLAHADKYTRLGAKIPKGVLLVGPPGTGKTLL 225

Query: 169 ARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRG 228
           A+A+AGEA VPFFS+S SEF+E+FVG GAAR+RDLF  A++ AP I+FIDELDA+G  RG
Sbjct: 226 AKAIAGEAKVPFFSISGSEFIELFVGIGAARVRDLFEQAKQQAPCIVFIDELDALGKARG 285

Query: 229 -----RSFNDERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLV 288
                   NDER+QTLNQLL+EMDGF+ ++ VI++AATNRPE LDPAL RPGRF R+++V
Sbjct: 286 GPGGFTGGNDEREQTLNQLLSEMDGFDPNVGVILLAATNRPEVLDPALLRPGRFDRQIVV 345

Query: 289 GEPDEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAALLAARRA 336
             PD+ GR  IL VH+R V L ED+NL  + +A  TPG+ GADLAN++NEAALLAAR++
Sbjct: 346 DRPDKMGREAILKVHVRGVKLAEDINL--TKLAVRTPGFSGADLANLVNEAALLAARQS 402

[Close]

BLAST of Clc11G05540 vs. ExPASy TrEMBL
Match: A0A5A7T7E8 (Putative inactive ATP-dependent zinc metalloprotease FTSHI 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002070 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.9e-176
Identity = 322/334 (96.41%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MN+DSRTVQAP+ NLLTKISRRKSRV IPEWQFSTRKVDHDEKFLL LMREKGTTYSSAP
Sbjct: 178 MNEDSRTVQAPKMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLSLMREKGTTYSSAP 237

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KRQPNSPMVGFEDVEGVDGA
Sbjct: 238 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDGA 297

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 298 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 357

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 358 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 417

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED
Sbjct: 418 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 477

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NEAALLAARR
Sbjct: 478 LNLICSLVAALTPGYVGADLANIVNEAALLAARR 511

[Close]

BLAST of Clc11G05540 vs. ExPASy TrEMBL
Match: A0A1S3C9P6 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498578 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.9e-176
Identity = 322/334 (96.41%), Postives = 328/334 (98.20%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MN+DSRTVQAP+ NLLTKISRRKSRV IPEWQFSTRKVDHDEKFLL LMREKGTTYSSAP
Sbjct: 239 MNEDSRTVQAPKMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLSLMREKGTTYSSAP 298

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KRQPNSPMVGFEDVEGVDGA
Sbjct: 299 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDGA 358

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 359 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 418

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 419 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 478

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED
Sbjct: 479 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 538

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NEAALLAARR
Sbjct: 539 LNLICSLVAALTPGYVGADLANIVNEAALLAARR 572

[Close]

BLAST of Clc11G05540 vs. ExPASy TrEMBL
Match: A0A0A0KSL6 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643270 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 2.5e-176
Identity = 322/334 (96.41%), Postives = 329/334 (98.50%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           M++DSRTVQAPRTNLLTKISRRKSRV IPEWQFSTRKVD DEKFLLGLMREKGTTYSSAP
Sbjct: 239 MSEDSRTVQAPRTNLLTKISRRKSRVAIPEWQFSTRKVDRDEKFLLGLMREKGTTYSSAP 298

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KRQPNSPMVGFEDVEGVDGA
Sbjct: 299 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDGA 358

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 359 KVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 418

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 419 FVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 478

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED
Sbjct: 479 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 538

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNLICSLVAALTPGYVGADLANI+NE+ALLAARR
Sbjct: 539 LNLICSLVAALTPGYVGADLANIVNESALLAARR 572

[Close]

BLAST of Clc11G05540 vs. ExPASy TrEMBL
Match: A0A6J1BY57 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006654 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 4.2e-171
Identity = 311/334 (93.11%), Postives = 323/334 (96.71%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MND+S TVQ+PR NLLTKISRR+SR   PEWQFSTRKVD DEKFLL LMREKGTTYSSAP
Sbjct: 240 MNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAP 299

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KR+PNSPMVGF+DVEGVDGA
Sbjct: 300 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGA 359

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 360 KVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 419

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 420 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 479

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+ED
Sbjct: 480 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKED 539

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNL+CSLVA+LTPGYVGADLANI+NEAALL ARR
Sbjct: 540 LNLVCSLVASLTPGYVGADLANIVNEAALLTARR 573

[Close]

BLAST of Clc11G05540 vs. ExPASy TrEMBL
Match: A0A6J1BXN8 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006654 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 4.2e-171
Identity = 311/334 (93.11%), Postives = 323/334 (96.71%), Query Frame = 0


Query: 1   MNDDSRTVQAPRTNLLTKISRRKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAP 60
           MND+S TVQ+PR NLLTKISRR+SR   PEWQFSTRKVD DEKFLL LMREKGTTYSSAP
Sbjct: 210 MNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAP 269

Query: 61  QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGA 120
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTT +KR+PNSPMVGF+DVEGVDGA
Sbjct: 270 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGA 329

Query: 121 KVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 180
           KVELMEVVSCLQGA NYQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 330 KVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 389

Query: 181 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 240
           FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 390 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 449

Query: 241 GFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEED 300
           GFE DMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+ED
Sbjct: 450 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKED 509

Query: 301 LNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           LNL+CSLVA+LTPGYVGADLANI+NEAALL ARR
Sbjct: 510 LNLVCSLVASLTPGYVGADLANIVNEAALLTARR 543

[Close]

BLAST of Clc11G05540 vs. TAIR 10
Match: AT3G02450.1 (cell division protein ftsH, putative )

HSP 1 Score: 520.4 bits (1339), Expect = 2.4e-147
Identity = 265/313 (84.66%), Postives = 286/313 (91.37%), Query Frame = 0


Query: 22  RKSRVPIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSAPQSVLMSMRTTLITIISLWIPL 81
           RK R   P W++ TRKVDHDEKFLL LMREKG TYSSAPQS LMSMRTTLITIISLWIPL
Sbjct: 244 RKVRALPPVWKYVTRKVDHDEKFLLSLMREKGITYSSAPQSALMSMRTTLITIISLWIPL 303

Query: 82  IPLMWLLYRQLSASNTTVRKRQPNSPMVGFEDVEGVDGAKVELMEVVSCLQGATNYQKLG 141
            PLMWLLYRQLSASN+  +KR+  +P VGF+DVEGVD AK EL+E+VSCLQG+ NY+KLG
Sbjct: 304 TPLMWLLYRQLSASNSPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLG 363

Query: 142 AKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVAR 201
           A+LP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE+FVGRGAARIRDLFN AR
Sbjct: 364 ARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAAR 423

Query: 202 KCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALD 261
           K +PSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFE D KVIVIAATNRPEALD
Sbjct: 424 KNSPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALD 483

Query: 262 PALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGADLA 321
            ALCRPGRFSRKVLV EPD+EGRRKILA+HLR+VPLEED  LIC LVA+LTPG+VGADLA
Sbjct: 484 SALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLA 543

Query: 322 NIINEAALLAARR 335
           NI+NEAALLAARR
Sbjct: 544 NIVNEAALLAARR 556

[Close]

BLAST of Clc11G05540 vs. TAIR 10
Match: AT5G15250.1 (FTSH protease 6 )

HSP 1 Score: 276.6 bits (706), Expect = 6.2e-74
Identity = 163/306 (53.27%), Postives = 203/306 (66.34%), Query Frame = 0


Query: 49  MREKGTTYSSAPQSVLMSMRTTLITII-SLWIPLIPLMWLLYRQLSASNTTVRKRQPNSP 108
           M+EK   +++ P +V  +    L+  + +L  PLI L+ LL    S  N       PN P
Sbjct: 150 MKEKNVDFAAHPMNV--NWGAFLLNFLGNLGFPLILLVSLLLTSSSRRNPA----GPNLP 209

Query: 109 M----------------VGFEDVEGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLV 168
                            + FEDV GVD AK +  E+V  L+    +  LGAK+PKGVLL 
Sbjct: 210 FGLGRSKAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLT 269

Query: 169 GPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFID 228
           GPPGTGKTLLA+A+AGEAGVPFFS+S SEF+EMFVG GA+R RDLFN A+  +P I+FID
Sbjct: 270 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFID 329

Query: 229 ELDAVGGKRGRSF---NDERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPG 288
           E+DAVG  RG      NDER+QTLNQ+LTEMDGF  +  VIVIAATNRPE LD AL RPG
Sbjct: 330 EIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPG 389

Query: 289 RFSRKVLVGEPDEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAA 335
           RF R+V VG PD  GR +IL VH R   L++D++L  S++A  TPG+ GADLAN++NEAA
Sbjct: 390 RFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSL--SVIAMRTPGFSGADLANLMNEAA 447

[Close]

BLAST of Clc11G05540 vs. TAIR 10
Match: AT1G50250.1 (FTSH protease 1 )

HSP 1 Score: 273.5 bits (698), Expect = 5.2e-73
Identity = 147/229 (64.19%), Postives = 171/229 (74.67%), Query Frame = 0


Query: 109 VGFEDVEGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGE 168
           V F DV G D AK+EL EVV  L+    Y  LGAK+PKG LLVGPPGTGKTLLARAVAGE
Sbjct: 259 VSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 318

Query: 169 AGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSF---N 228
           AGVPFFS +ASEFVE+FVG GA+R+RDLF  A+  AP I+FIDE+DAVG +RG      N
Sbjct: 319 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 378

Query: 229 DERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRR 288
           DER+QT+NQLLTEMDGF  +  VIV+AATNRP+ LD AL RPGRF R+V V  PD  GR 
Sbjct: 379 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 438

Query: 289 KILAVHLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           KIL VH R   L +D++     VA  TPG+ GADL N++NEAA+LAARR
Sbjct: 439 KILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARR 485

[Close]

BLAST of Clc11G05540 vs. TAIR 10
Match: AT2G30950.1 (FtsH extracellular protease family )

HSP 1 Score: 273.1 bits (697), Expect = 6.8e-73
Identity = 144/236 (61.02%), Postives = 179/236 (75.85%), Query Frame = 0


Query: 103 QPNSPMVGFEDVEGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLA 162
           +PN+  V F+DV GVD AK + MEVV  L+    +  +GAK+PKGVLL+GPPGTGKTLLA
Sbjct: 219 EPNTG-VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLA 278

Query: 163 RAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGR 222
           +A+AGEAGVPFFS+S SEFVEMFVG GA+R+RDLF  A++ AP I+F+DE+DAVG +RG 
Sbjct: 279 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 338

Query: 223 SF---NDERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEP 282
                NDER+QTLNQLLTEMDGFE +  VIV+AATNR + LD AL RPGRF R+V V  P
Sbjct: 339 GIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVP 398

Query: 283 DEEGRRKILAVHLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAALLAARRA 336
           D +GR  IL VH      + D++L   ++A  TPG+ GADLAN++NEAA+LA RRA
Sbjct: 399 DVKGRTDILKVHAGNKKFDNDVSL--EIIAMRTPGFSGADLANLLNEAAILAGRRA 451

[Close]

BLAST of Clc11G05540 vs. TAIR 10
Match: AT5G42270.1 (FtsH extracellular protease family )

HSP 1 Score: 269.6 bits (688), Expect = 7.5e-72
Identity = 145/229 (63.32%), Postives = 171/229 (74.67%), Query Frame = 0


Query: 109 VGFEDVEGVDGAKVELMEVVSCLQGATNYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGE 168
           V F DV G D AK+EL EVV  L+    Y  LGAK+PKG LLVGPPGTGKTLLARAVAGE
Sbjct: 247 VTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306

Query: 169 AGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSF---N 228
           AGVPFFS +ASEFVE+FVG GA+R+RDLF  A+  AP I+FIDE+DAVG +RG      N
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 366

Query: 229 DERDQTLNQLLTEMDGFELDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRR 288
           DER+QT+NQLLTEMDGF  +  VIV+AATNRP+ LD AL RPGRF R+V V  PD  GR 
Sbjct: 367 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 426

Query: 289 KILAVHLREVPLEEDLNLICSLVAALTPGYVGADLANIINEAALLAARR 335
           +IL VH R   + +D++     VA  TPG+ GADL N++NEAA+LAARR
Sbjct: 427 QILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNLMNEAAILAARR 473

The following BLAST results are available for this feature:

BLAST of Clc11G05540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890854.1	2.4e-176	96.71	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Ben...	[more]
XP_008459447.1	4.0e-176	96.41	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chlorop...	[more]
KAA0039402.1	4.0e-176	96.41	putative inactive ATP-dependent zinc metalloprotease FTSHI 3 [Cucumis melo var. ...	[more]
XP_004141600.1	5.2e-176	96.41	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Cuc...	[more]
XP_022134380.1	8.7e-171	93.11	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]

BLAST of Clc11G05540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M895	3.4e-146	84.66	Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=A...	[more]
D1CDT8	3.6e-79	51.45	ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC B...	[more]
D1C8C0	4.0e-78	55.38	ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter thermophilus (strain ...	[more]
B9L3S8	1.5e-77	59.64	ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum (strain ATCC...	[more]
A8ZNZ4	7.6e-77	54.52	ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina (strain MBIC 110...	[more]

BLAST of Clc11G05540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7E8	1.9e-176	96.41	Putative inactive ATP-dependent zinc metalloprotease FTSHI 3 OS=Cucumis melo var...	[more]
A0A1S3C9P6	1.9e-176	96.41	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=C...	[more]
A0A0A0KSL6	2.5e-176	96.41	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643270 PE=3 SV...	[more]
A0A6J1BY57	4.2e-171	93.11	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]
A0A6J1BXN8	4.2e-171	93.11	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]

BLAST of Clc11G05540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02450.1	2.4e-147	84.66	cell division protein ftsH, putative	[more]
AT5G15250.1	6.2e-74	53.27	FTSH protease 6	[more]
AT1G50250.1	5.2e-73	64.19	FTSH protease 1	[more]
AT2G30950.1	6.8e-73	61.02	FtsH extracellular protease family	[more]
AT5G42270.1	7.5e-72	63.32	FtsH extracellular protease family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 144..280 e-value: 3.7E-21 score: 86.3
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 393..433 e-value: 0.0012 score: 28.1
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 393..426 e-value: 4.8E-6 score: 26.3
None	No IPR available	GENE3D	1.10.8.60		coord: 279..365 e-value: 6.4E-17 score: 63.3
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 13..338
None	No IPR available	PANTHER	PTHR23076:SF110	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 3, CHLOROPLASTIC-RELATED	coord: 13..338
None	No IPR available	CDD	cd00009	AAA	coord: 145..278 e-value: 2.38301E-28 score: 109.158
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 308..334 e-value: 4.5E-9 score: 36.0
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 495..682 e-value: 1.1E-20 score: 71.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..277 e-value: 1.9E-64 score: 218.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 110..334
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 596..705 e-value: 3.7E-7 score: 30.1
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 148..276 e-value: 1.7E-43 score: 148.2
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 248..266
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 392..445

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G05540.2	Clc11G05540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding