Clc11G04280 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G04280
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Squalene synthase
Location	ClcChr11: 4060815 .. 4066957 (-)
RNA-Seq Expression	Clc11G04280
Synteny	Clc11G04280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATTGATTATCATTTGAATTTGAGGCTTCAAAAAAATTCAGTTTTGAACACGCCATTTTGGCAATTTGTATATTCACCATTGATCAGGAAGGGCTCTCTGTCTACAAGTTCCTCATCCATTTCTGTATTAAGAAACCACGTCTTTCACGTTTTTTTCTTTCCAATCTCTGATTACAGGAAGGATCTCAACAAACATTTTGATTTTGATTTTGATTCTGCATAGCAATAAAAGCAACAAACAACTAGCCAAAGTCTTCTTTCAAACTTCGCTCTGCAAAAACTCGTTTGTCTTCCTTTTACGTTGAGACACATCTGAAAATAACCCTTCATTCAGTTTTCAGTCATTTGGGTTTCAATCATTCTGTTCTCTTTGCTTTCTACTTTGAATTTCTCATCATCAATTGAAGAATTGGAATCCCATTTGAGGAATTGGGCATTTGTTTTACGGGTTGACCAGCGAGAGATCTGAAGCTCTGTGGTTGTGAGAGCGAGAAATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTTTGAAACTGAAAATGGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATACCATGCTGCATAAAGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTAAGTTGAAGATCAAGTGTTCTACATCTTTTTTGTTCATTCATAATACTGATATTTTGGCGTTTCTTTAGTTGAACGAATCTGTTTCATTTTCTGAGTTTCTGGTGTTGATGTTGAAATCCATTTATCAGCTCTGATGGGTTTTCTTTGTGAACAGTTTGGAGGATTGACCGTTTGTTTGCAACGTTGTTAGGGAAAAAAATTGATAGGTGTAGAATCTGATACTGTTAACATTATTTACTGAGGAGTGAGGAATATCCAATTTATAGCTCAAATATCGCCTTCATAATCCTGTTGGGAAGTAAAATAATGGATTTAGGATTATAGAAAATCACTCTATTTTGCAAATGATACCTTATGATTTGGAACATTGTTCTGGTTTGAAATCTGCAAATCATAATATTATATCTCAATTAATTTTAATGAAACTAGTACCCATGAACTCATAGAAGCTACCGACGTTAATTCTATGGCATTGTAGTGTTTCTTGATTAAGCAAATCACAACAATATTTGAAACTATTCATGAATAGGCAAACTTAATTAATTTGATTTGTATTTATCTCTTAAATAAGATGTCATCGCCTTACAATTTATTTAAATTGAGACTGTCTATTCATTGACTTTTACATGATGGAGAAAAAAAGAAATATATAATTTTGGACATTTCAATTTTTCTCACGAAATTGCCAATTATGTTAACTGTATTGTACAACAACCAAGCGGTTCCACTAGTTTCATGGATAGTATCTACTGGCCAAAGCTTTGCTGGGCGCATGTTTTCAGATCTTTCATCACTGTGAAATCTTTCTAGTTTCATTTCCTTATACTATTACACACCTGTAATTATGCCAATATTCCTTTTCTTCAAAGCTATGCTAGGTTTTATTTGTTTATTTTGGGATGTGTCATTCAATTTGTCTTTATTGCATTGGATTGTGGTACAAGTAGTAGCTCTTACTACACAATCTCAGCGTTTGTCTGTCCAGTAATTACTGAAGTGTTTGTATTTTCTTATCCATCATAATATTTCTTAGCTTATCGTTTTTGGTTATTTGCAGGTATGCATATTTTATCTTGTTCTGCGAGCCCTCGATACTGTTGGTATGTAATGAACTCTTTACTTCTTTTTGTATGTGAGATCCTAATGTATGCATCCTTGGCCTTAATATTGAGAAATTTAATGGTTTTTTCTCCTGTAGTAATTAATGCAGGTGGAATAATAACTAGGTTGGCATTTTGGTGGCTTTATATTGTGTTTTACTTCCCCCTTGGCATATATCTCATTTTATCTTACTCCTGCTAAATGAACTTTAAGTTCATTACCCTGAGTTTGTAAACTTAATTTATTTCAAGTTCTCACTTGCGTACTCACAATCTTAAGGGACTGTTTGGGGGGCTAGAATATAATAGGATTACTAGGAATCAGAGGTGTATTGGAATGCGTGAGAAATCGAGGACGAACTGATAATGAGATTGCGAAGTGTGAAAATGGTGGAAAATAGGGTTGGGTTGAAAACTATCGGAACAGAATGAGTTTTGTATTACAAATCGAGCCCAAAACGCTCAATTCAAAAATTGATTTTGGATTACATTACGTCACAATCCCATCCTATTATGGTCGCCCAAACACTCCCTAATAGTTGGCAATCTCACTTGAAGACAATCATTCCATCTTAATATGTTGCTTAATTGATAGAATCTATTTTTTCTTCTTTCCAATTATATAGATACATGTGTATGAATGAAGAATATGTAGAATTTCGTGTCTGTTTCGTTTTGATGTGGATTTGCCTAATGTTGCCTATTATCATAGCGATTTTTCGGTTGATTGCGTTTGCTTCTCTCCTTAGGCTTCACATTGCACCTTTCATTTTGCACCTCTTGGGTCTCCTGATAGATGTTTTCCAACTGATCGACCATTGATATTTTCTTTACAGAGGATGATACAGGCATACAAACAGACATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGTAAGTTTTGTACTAGTAATTCTGTCCTCTCTTTAGAGTAAAAAACAAATTAACAAAATGAAGCTCTGTGCATATGAGAACGATGTTTTAAGAGTTGTTTTTTTCAGGATCTTCTCTTCTTCTACTGAATGTGTTCTTTTTTCTATATTTAGGTGGCACAAAGGACTATAAAGTTCTTATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTAGAACTTGGGAAAGGGTTTGTTACTGGAACCTACTGACTCCTGTCTGATTCTCTCTGACAGAGACAGTTATTAATTATTGATCAATGTTTATAGCAGTGTTTCCCCTCCAACATTTTCTTCTAGCTTGGGGATTTTTTAAAGATCTTCAATAAACTAAGATTAATGGTTCAGGGATGGTGGTACATTAATGACTTGATGTTCTTTCTGAATTTAATTTACTTCATCACTGCAATTATTTCTGGTTTCTTATTTTTTTTTTTCTTAAAAAGTAAACAAACTTTTATGTGTTCAAGAAAGAAAGCTACAAGAGACTAGTGGAACAAGTTGTCCAACTCTAGAGCAACCTTTTCATTTTGGTATCAAATAAAAGGCCTCCAACTTGTCGAAGTTCTTAAAACGGAACATCAGAAAATCCTTCTGCATACAACATCTTTGATTCTCACTAAAAATTCTTCTGTGTTTAACTCACTATGCTTAATTGCGTCTGCAGGTACCAGGAAGCAATTGAGGATATCACAAAACGGATGGGTGCAGGCATGGCTAAATTCATTTGCCAAGAGGTACACCATGAGTTTGTCCTTACGTATGTTGACTTTTCTTTGCATTGCATTTGTGCCATTTTTGTAGCACTAGTCTATCAATAAGACCTGCTTAGGGGAAGTTAATATTAATGCTCTTAAACTAATTCCTGTTAATTTATTCAAAGTGTGAATATTACTCATTTTCTTTTTCCTTCCTACCTAATAGAGTAGTAAATTAGTAATGGAAGGGACTTGGCGGAAGCAATGTATTGATTGGTGAAGACACTGAAACATTTCTTCTCCTCTTGTAAGGTTGAGACAGTTGGTGATTATGATGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAGTCAGAGGATTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGGTCAACTATTATAACTTAAGTCATCATTGTTCTTTCAAATAGTTCATTAACTTTTGTTGAAGTTTGACTCTGACATGGTCGTTTTTGAACTATCATAATGCAGAAAACAAACATTATCCGAGATTACTTGGAGGACATTAATGAGATACCAAAGTCTAGAATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGTTCATAAGTCTATATGCCTTTTGCTTTCTACTTTCTAGTTCTTCTATCGTCTTTTCATCTGATTCGCTTGTTTCTCCGTTTTTTGCATTACAGGATTTTAAATATGAGGAGAATTCAGTCAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGAGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGGTATGAAATTTTTTGACCTCCTGTAGGATAAGTCGTAAGCAAGAACTTTCCCTTTGTGCTTATGCATTTGTACCATCAAACTTGCAATTTTATACTGACCTGATGGTGTGTTTCATTCGTTGACCTCCTTCTAATAACTTTTGAAGCAAGAATCAACTTTTCAAACCATGCTTGCTTGTATGAAATAATTTCAATTCCATTAACAATTTGATATATTAGAGAAAGAAATCCATTTAATCAACGAAAAATCTTGTTTTCTTTTCCAAAAAAAAGAAACCCAGAGAAAGAAATCACCAACACTTTTTAATCATTCAAGTTCAGTATATGTACATATTTCGTACTTGATATTGAAGCAATGGTCCTTTATGGCACAATTAAGTATGAAATCTGAACCAAAATTTCGCCAAACACGTATAGTCGATTTTGATATAAATGAAGGCTGCTGTACACATCTCTTTCATGCCAAGAACAGTGTTTTAACATTTTTGTAGAGTAATTATCTAGGTTGGGATTTTCTTGATAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAATGTCGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTAAGATTTTCATTTACAGTTACATTTTTTAACAAACAATTTGTTAAAAAAAATTCCAAAAAAGGTGCACCAATATAGAGAGAAGTAAAAGAAATCTAGCCTTTTTAGAAACTAATCATAGTTTGAATTTGTATGGCTTTTTTTCTGCAGGTCTTACTGCTAAGGTCATTGATCGAACAAAAACGATGGCTGACGTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTAGAAATCTTCCTATCAGACTCAGATTGCTCACTGATTGCACATCGCTTTTCTGCATAAATAATCAGAGCTTATCACATCGTCATCTAAAGTTGCTTTATAAAACTAACATCCTTGGGTTCTACAGGTCAACAGCAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAACATGCAAGCAGTCGGGGCTCTTGAACAAGAGGTTTGTGTTATCCCCTCAAGTCTCTCTCTTTCCTATCTTTCAACCTTAAATTCCTCCGCGCTCTCTGAACATCGTTCATCTGTGTTATTGTTCACCAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAATCCAGCTGTGGTGAGTTTCTATTACTCAAATCGCATTAAAATGATATCGTTAAGTAATTACGTAAGAATGTCTGATGATGTGTGTTGTTCGAATCCAGATTGTCATACTTTTCAGCCTATTATGCATCATTCTCGCGTATCTCTCTGCCAAACGGTTACCAGCCAACCAATCTGTATGAGCGTCAAACTCCGGTAAGGATCTTACCGGTTAGGTCACTGATTACAAAGGAAACCAACCAAACACAAGAACATATCTAGTGACTTGTAGTTCTAACTTCAGTTTCTTCGAATGCAGTATACGAGTTCCAACAGAACACACTGCAAACGTGCACGGCATGATTCAGTTTCTGGTCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTACTGTTTGTTTAGTACAGAACAGGAAACAACTGAAATCCTGTAGCCTTCTAATGGATATAGTGTAATGTTTGACATGAAAATAAGCTTGCTATTCATCTTGTTTTCCAGTCTTCTAATAAGGGATTAAGTCTTGGAATTAAGAGTTCTTCATAAGAGTAATTTACAATGAACAAATGGTATGCATCTGTT

mRNA sequence

TGAAAATTGATTATCATTTGAATTTGAGGCTTCAAAAAAATTCAGTTTTGAACACGCCATTTTGGCAATTTGTATATTCACCATTGATCAGGAAGGGCTCTCTGTCTACAAGTTCCTCATCCATTTCTGTATTAAGAAACCACGTCTTTCACGTTTTTTTCTTTCCAATCTCTGATTACAGGAAGGATCTCAACAAACATTTTGATTTTGATTTTGATTCTGCATAGCAATAAAAGCAACAAACAACTAGCCAAAGTCTTCTTTCAAACTTCGCTCTGCAAAAACTCGTTTGTCTTCCTTTTACGTTGAGACACATCTGAAAATAACCCTTCATTCAGTTTTCAGTCATTTGGGTTTCAATCATTCTGTTCTCTTTGCTTTCTACTTTGAATTTCTCATCATCAATTGAAGAATTGGAATCCCATTTGAGGAATTGGGCATTTGTTTTACGGGTTGACCAGCGAGAGATCTGAAGCTCTGTGGTTGTGAGAGCGAGAAATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTTTGAAACTGAAAATGGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATACCATGCTGCATAAAGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGCATATTTTATCTTGTTCTGCGAGCCCTCGATACTGTTGAGGATGATACAGGCATACAAACAGACATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGTGGCACAAAGGACTATAAAGTTCTTATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTAGAACTTGGGAAAGGGTACCAGGAAGCAATTGAGGATATCACAAAACGGATGGGTGCAGGCATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGGTGATTATGATGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAGTCAGAGGATTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATCCGAGATTACTTGGAGGACATTAATGAGATACCAAAGTCTAGAATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTCAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGAGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAATGTCGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACAAAAACGATGGCTGACGTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAGCAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAACATGCAAGCAGTCGGGGCTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAATCCAGCTGTGGTGAGTTTCTATTACTCAAATCGCATTAAAATGATATCGTTAAGTAATTACGTAAGAATGTCTGATGATGTGTGTTGTTCGAATCCAGATTGTCATACTTTTCAGCCTATTATGCATCATTCTCGCGTATCTCTCTGCCAAACGGTTACCAGCCAACCAATCTGTATGAGCGTCAAACTCCGTATACGAGTTCCAACAGAACACACTGCAAACGTGCACGGCATGATTCAGTTTCTGGTCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTACTGTTTGTTTAGTACAGAACAGGAAACAACTGAAATCCTGTAGCCTTCTAATGGATATAGTGTAATGTTTGACATGAAAATAAGCTTGCTATTCATCTTGTTTTCCAGTCTTCTAATAAGGGATTAAGTCTTGGAATTAAGAGTTCTTCATAAGAGTAATTTACAATGAACAAATGGTATGCATCTGTT

Coding sequence (CDS)

ATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTTTGAAACTGAAAATGGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATACCATGCTGCATAAAGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGCATATTTTATCTTGTTCTGCGAGCCCTCGATACTGTTGAGGATGATACAGGCATACAAACAGACATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGTGGCACAAAGGACTATAAAGTTCTTATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTAGAACTTGGGAAAGGGTACCAGGAAGCAATTGAGGATATCACAAAACGGATGGGTGCAGGCATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGGTGATTATGATGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAGTCAGAGGATTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATCCGAGATTACTTGGAGGACATTAATGAGATACCAAAGTCTAGAATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTCAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGAGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAATGTCGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACAAAAACGATGGCTGACGTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAGCAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAACATGCAAGCAGTCGGGGCTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAATCCAGCTGTGGTGAGTTTCTATTACTCAAATCGCATTAAAATGATATCGTTAAGTAATTACGTAAGAATGTCTGATGATGTGTGTTGTTCGAATCCAGATTGTCATACTTTTCAGCCTATTATGCATCATTCTCGCGTATCTCTCTGCCAAACGGTTACCAGCCAACCAATCTGTATGAGCGTCAAACTCCGTATACGAGTTCCAACAGAACACACTGCAAACGTGCACGGCATGATTCAGTTTCTGGTCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTACTGTTTGTTTAG

Protein sequence

MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYSNRIKMISLSNYVRMSDDVCCSNPDCHTFQPIMHHSRVSLCQTVTSQPICMSVKLRIRVPTEHTANVHGMIQFLVIIFLRALFKYYNGCKLLFV

Homology

[Close]

BLAST of Clc11G04280 vs. NCBI nr
Match: XP_038902127.1 (squalene synthase 12-like [Benincasa hispida])

HSP 1 Score: 801.6 bits (2069), Expect = 3.8e-228
Identity = 387/397 (97.48%), Postives = 392/397 (98.74%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLH+VSRSFALVIQQL+P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHRVSRSFALVIQQLEP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAAK EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. NCBI nr
Match: ARE29889.1 (squalene synthase [Benincasa hispida var. chieh-qua])

HSP 1 Score: 801.6 bits (2069), Expect = 3.8e-228
Identity = 387/397 (97.48%), Postives = 392/397 (98.74%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLH+VSRSFALVIQQL+P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHRVSRSFALVIQQLEP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAAK EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. NCBI nr
Match: ARE29887.1 (squalene synthase [Cucumis sativus] >ARE29888.1 squalene synthase [Cucumis sativus])

HSP 1 Score: 793.1 bits (2047), Expect = 1.4e-225
Identity = 382/397 (96.22%), Postives = 391/397 (98.49%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQ+TCKQSG+LN+RKLYVVRSEPM+NPAV+   +S
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. NCBI nr
Match: XP_008461009.1 (PREDICTED: squalene synthase-like [Cucumis melo] >XP_008461010.1 PREDICTED: squalene synthase-like [Cucumis melo] >XP_008461011.1 PREDICTED: squalene synthase-like [Cucumis melo] >XP_008461012.1 PREDICTED: squalene synthase-like [Cucumis melo])

HSP 1 Score: 792.7 bits (2046), Expect = 1.8e-225
Identity = 383/397 (96.47%), Postives = 390/397 (98.24%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. NCBI nr
Match: KAA0045628.1 (squalene synthase-like [Cucumis melo var. makuwa] >TYK02627.1 squalene synthase-like [Cucumis melo var. makuwa])

HSP 1 Score: 792.7 bits (2046), Expect = 1.8e-225
Identity = 383/397 (96.47%), Postives = 390/397 (98.24%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. ExPASy Swiss-Prot
Match: O48666 (Squalene synthase 1 OS=Panax ginseng OX=4054 GN=SS1 PE=2 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 7.3e-198
Identity = 325/396 (82.07%), Postives = 364/396 (91.92%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHP+DFYPLLKLK AARHAEKQIPPEPHW FCY+MLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPEDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           +LR+AVCIFYLVLRALDTVEDDT I T++KVPIL AFH HIY++DWHFSCGTK+YKVLMD
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVS AFLELG GYQEAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+ +EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+++DPNA+KTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY 397
           EAIQ+TCK+SG L+KRK Y++ SE  +N A+++  +
Sbjct: 361 EAIQKTCKESGTLSKRKSYIIESESGHNSALIAIIF 396

[Close]

BLAST of Clc11G04280 vs. ExPASy Swiss-Prot
Match: A0A1P7Y0A8 (Squalene synthase 12 OS=Panax ginseng OX=4054 GN=SS12 PE=2 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 8.0e-197
Identity = 322/396 (81.31%), Postives = 363/396 (91.67%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           +LR+AVCIFYLVLRALDTVEDDT I T++KVPI+ AFHCHIY+ DWHFSCGTK+YKVLMD
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+ +EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+++DPNA+KTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY 397
           EAIQ+TCK+SG L+KRK Y++ SE  +N A+++  +
Sbjct: 361 EAIQKTCKESGTLSKRKSYIIESESGHNSALIAIIF 396

[Close]

BLAST of Clc11G04280 vs. ExPASy Swiss-Prot
Match: A0A1P7Y0D0 (Squalene synthase 13 OS=Panax ginseng OX=4054 GN=SS13 PE=2 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 8.0e-197
Identity = 322/396 (81.31%), Postives = 363/396 (91.67%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           +LR+AVCIFYLVLRALDTVEDDT I T++KVPI+ AFHCHIY+ DWHFSCGTK+YKVLMD
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+ +EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+++DPNA+KTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY 397
           EAIQ+TCK+SG L+KRK Y++ SE  +N A+++  +
Sbjct: 361 EAIQKTCKESGTLSKRKSYIIESESGHNSALIAIIF 396

[Close]

BLAST of Clc11G04280 vs. ExPASy Swiss-Prot
Match: D2K762 (Squalene synthase 3 OS=Panax ginseng OX=4054 GN=SS3 PE=2 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 4.0e-196
Identity = 324/393 (82.44%), Postives = 358/393 (91.09%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           +LR+AVCIFYLVLRALDTVEDDT I T++KVPI+ AFHCHIY+ DWHFSCGTK+YKVLMD
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+ +EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYG FFDFS MLK+KV+++DPNA+KTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGTFFDFSCMLKSKVDNNDPNATKTLSRL 360

Query: 361 EAIQQTCKQSG-LLNKRKLYVVRSEPMYNPAVV 393
           EAIQ+ CK SG L  KRK Y++ +E  YN  ++
Sbjct: 361 EAIQKICKNSGALTTKRKSYIIENESGYNSTLI 393

[Close]

BLAST of Clc11G04280 vs. ExPASy Swiss-Prot
Match: C9E894 (Squalene synthase 2 OS=Panax ginseng OX=4054 GN=SS2 PE=2 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 6.8e-196
Identity = 325/393 (82.70%), Postives = 359/393 (91.35%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           +LR+AVCIFYLVLRALDTVEDDT I T++KVPIL AFH HIY+ DWHFSCGTK+YKVLMD
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVS AFL+LG GY+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSGYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+ +EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIM+IGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMSIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYGAFFDFS MLK+KV+++DPNA+KTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360

Query: 361 EAIQQTCKQSG-LLNKRKLYVVRSEPMYNPAVV 393
           EAIQ+ CK SG L  KRK Y++ +E  YN  ++
Sbjct: 361 EAIQKICKNSGALTTKRKSYIIENESGYNSTLI 393

[Close]

BLAST of Clc11G04280 vs. ExPASy TrEMBL
Match: A0A2R2WEW2 (Squalene synthase OS=Benincasa hispida var. chieh-qua OX=1208597 PE=2 SV=1)

HSP 1 Score: 801.6 bits (2069), Expect = 1.8e-228
Identity = 387/397 (97.48%), Postives = 392/397 (98.74%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLH+VSRSFALVIQQL+P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHRVSRSFALVIQQLEP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAAK EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. ExPASy TrEMBL
Match: A0A2R2WEW0 (Squalene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 6.6e-226
Identity = 382/397 (96.22%), Postives = 391/397 (98.49%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQ+TCKQSG+LN+RKLYVVRSEPM+NPAV+   +S
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. ExPASy TrEMBL
Match: A0A1S3CD95 (Squalene synthase OS=Cucumis melo OX=3656 GN=LOC103499718 PE=3 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 8.6e-226
Identity = 383/397 (96.47%), Postives = 390/397 (98.24%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. ExPASy TrEMBL
Match: A0A5A7TS05 (Squalene synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00350 PE=3 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 8.6e-226
Identity = 383/397 (96.47%), Postives = 390/397 (98.24%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. ExPASy TrEMBL
Match: A0A0A0LIW1 (Squalene synthase OS=Cucumis sativus OX=3659 GN=Csa_2G251460 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.9e-225
Identity = 381/397 (95.97%), Postives = 391/397 (98.49%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS 398
           EAIQ+TCKQSG+LN+RKLYVVRSEPM+NPAV+   +S
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFS 397

[Close]

BLAST of Clc11G04280 vs. TAIR 10
Match: AT4G34640.1 (squalene synthase 1 )

HSP 1 Score: 652.9 bits (1683), Expect = 2.0e-187
Identity = 311/382 (81.41%), Postives = 345/382 (90.31%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSLG +L++PDD YPLLK+K A   AEKQIPPEPHWGFCY+MLHKVSRSF+LVIQQL  
Sbjct: 1   MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVC+FYLVLRALDTVEDDT I TD KVPIL AFH HIY+ DWH+SCGTK+YK+LMD
Sbjct: 61  ELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           +FHHVS AFLEL KGYQEAIE+IT+RMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGL
Sbjct: 121 QFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240
           SKLF AA SE L PD  ++SNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD
Sbjct: 181 SKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240

Query: 241 KLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA 300
           KLED KYEEN+ K+VQCLN++VTNAL H+EDCLKYM +LRD SIFRFCAIPQIMAIGTLA
Sbjct: 241 KLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGTLA 300

Query: 301 LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLS 360
           LCYNN +VFRGVVK+RRGLTAKVIDRTKTMADVYGAF+DFS MLK KV+ +DPNASKTL+
Sbjct: 301 LCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKTLN 360

Query: 361 RIEAIQQTCKQSGLLNKRKLYV 381
           R+EA+Q+ C+ +G+L  RK YV
Sbjct: 361 RLEAVQKLCRDAGVLQNRKSYV 382

[Close]

BLAST of Clc11G04280 vs. TAIR 10
Match: AT4G34650.1 (squalene synthase 2 )

HSP 1 Score: 607.4 bits (1565), Expect = 9.8e-174
Identity = 288/382 (75.39%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
           MGSL  IL+HPD+ YPLLKLK+A   A+KQIP EPH  FCY++LHKVS+SF+LVIQQL  
Sbjct: 1   MGSLSTILRHPDELYPLLKLKLAITKAQKQIPLEPHLAFCYSILHKVSKSFSLVIQQLGT 60

Query: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
           ELRNAVC+FYL+LRALDTVEDDT +  +IKVPIL AFH HIY+ DWHFSCGTK+YK+LMD
Sbjct: 61  ELRNAVCVFYLILRALDTVEDDTSVPVEIKVPILIAFHRHIYDGDWHFSCGTKEYKLLMD 120

Query: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGL 180
           +FHHVS AFL+L KGYQEAIEDITKRMGAGMAKFIC+EVET+ DYDEYCHY AGLVGLGL
Sbjct: 121 QFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGLGL 180

Query: 181 SKLFHAAKSEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240
           SK+F A++ E L PD   +SNS GLFLQKTNII+DYLEDINE PKSRMFWPREIWGKY D
Sbjct: 181 SKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDYLEDINERPKSRMFWPREIWGKYVD 240

Query: 241 KLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA 300
           KLEDFK EE + KAVQCLN++VTNALNHVEDCLK +++LRD +IF+ CAIPQI+AIGTLA
Sbjct: 241 KLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLA 300

Query: 301 LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLS 360
           LCYNNV+VFRGVV++RRGL AKVIDRTKTM DVYGAF+DFS ML+ KV+++DPNA KTL+
Sbjct: 301 LCYNNVQVFRGVVRLRRGLIAKVIDRTKTMDDVYGAFYDFSCMLQTKVDNNDPNAMKTLN 360

Query: 361 RIEAIQQTCKQSGLLNKRKLYV 381
           R+E I++ CK++G L+KRK YV
Sbjct: 361 RLETIKKFCKENGGLHKRKSYV 382

The following BLAST results are available for this feature:

BLAST of Clc11G04280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902127.1	3.8e-228	97.48	squalene synthase 12-like [Benincasa hispida]	[more]
ARE29889.1	3.8e-228	97.48	squalene synthase [Benincasa hispida var. chieh-qua]	[more]
ARE29887.1	1.4e-225	96.22	squalene synthase [Cucumis sativus] >ARE29888.1 squalene synthase [Cucumis sativ...	[more]
XP_008461009.1	1.8e-225	96.47	PREDICTED: squalene synthase-like [Cucumis melo] >XP_008461010.1 PREDICTED: squa...	[more]
KAA0045628.1	1.8e-225	96.47	squalene synthase-like [Cucumis melo var. makuwa] >TYK02627.1 squalene synthase-...	[more]

BLAST of Clc11G04280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48666	7.3e-198	82.07	Squalene synthase 1 OS=Panax ginseng OX=4054 GN=SS1 PE=2 SV=1	[more]
A0A1P7Y0A8	8.0e-197	81.31	Squalene synthase 12 OS=Panax ginseng OX=4054 GN=SS12 PE=2 SV=1	[more]
A0A1P7Y0D0	8.0e-197	81.31	Squalene synthase 13 OS=Panax ginseng OX=4054 GN=SS13 PE=2 SV=1	[more]
D2K762	4.0e-196	82.44	Squalene synthase 3 OS=Panax ginseng OX=4054 GN=SS3 PE=2 SV=1	[more]
C9E894	6.8e-196	82.70	Squalene synthase 2 OS=Panax ginseng OX=4054 GN=SS2 PE=2 SV=1	[more]

BLAST of Clc11G04280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2R2WEW2	1.8e-228	97.48	Squalene synthase OS=Benincasa hispida var. chieh-qua OX=1208597 PE=2 SV=1	[more]
A0A2R2WEW0	6.6e-226	96.22	Squalene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A1S3CD95	8.6e-226	96.47	Squalene synthase OS=Cucumis melo OX=3656 GN=LOC103499718 PE=3 SV=1	[more]
A0A5A7TS05	8.6e-226	96.47	Squalene synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00...	[more]
A0A0A0LIW1	1.9e-225	95.97	Squalene synthase OS=Cucumis sativus OX=3659 GN=Csa_2G251460 PE=3 SV=1	[more]

BLAST of Clc11G04280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34640.1	2.0e-187	81.41	squalene synthase 1	[more]
AT4G34650.1	9.8e-174	75.39	squalene synthase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 34..370 e-value: 1.0E-121 score: 408.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 37..367
IPR006449	Squalene synthase-like	TIGRFAM	TIGR01559	TIGR01559	coord: 36..367 e-value: 3.9E-160 score: 530.5
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 45..315 e-value: 8.4E-42 score: 143.5
IPR002060	Squalene/phytoene synthase	SFLD	SFLDG01018	Squalene/Phytoene_Synthase_Li	coord: 37..325 e-value: 0.0 score: 217.5
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 37..325 e-value: 0.0 score: 217.5
None	No IPR available	PANTHER	PTHR11626:SF5	SQUALENE SYNTHASE-LIKE ISOFORM X1	coord: 1..393
IPR044844	Trans-isoprenyl diphosphate synthases, eukaryotic-type	PANTHER	PTHR11626	FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE	coord: 1..393
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 201..229
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 168..183
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 38..320 e-value: 1.39007E-88 score: 270.26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G04280.2	Clc11G04280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0008610	lipid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004310	farnesyl-diphosphate farnesyltransferase activity
molecular_function	GO:0051996	squalene synthase activity
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups