Clc11G03920 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G03920
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	auxin-responsive protein SAUR21-like
Location	ClcChr11: 3753937 .. 3754855 (-)
RNA-Seq Expression	Clc11G03920
Synteny	Clc11G03920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAGCACTCTATTTCCTCAAATTACATATCAAGCAAAACACCATTCAAACTCACTCACCCTTCTCTTGTTTCGAGTAAATTTTCGATATGGGAATCCATTTGCCATCAATTCTTCTTAATGCCAAGCACATTCTAAAAATGCAAGCTATGTCTACCAGAAATCAATCTAATGTTCCGAAAGGTCATATTGCAGTTTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTTCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAAAAGAAGAATTTGGATTTTGCCATCCGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGTTGCACACATCATGAATGAAAGTTGAAAGAACAAAAAAGAAATGTTCTCGATCACAGTTTTGTCACCTCCAAATTTTAGGAAGTAGAGTAGGATAATATTGTATAGTAACTTGGTTGTTTGAGCAATGGAAGTTGCATTCTTCTCTTACAAAAACATCTCTTTTGAGCTCGAATTTCAAATTTTATCAATTACTTTGTTTACCTCTCACTGCTTTAACATAACTGAAGACTAAACAGATCTGAAGTTTAAACTTGGTTTAATCGAATTAAATCGATAGGATTGGTAAAGTTTTTAACCAATAAATCGCCTTTTAACGACATTTGGAGGATCCAACACTTCTATATTACCAAAGTTCAGAAATATAGTTCCTCAGTTCTCATCAGATATTTCAATGGTAGCGGGCATAAATCCACATAGATTTCTCCAAACTATTAGACATAAAATTAAAAGTTCATAGACCTGTATTTGACACAGAACTAGCTGATAATATAACCTTAACCTTTCTATATAGAGCGATAAAGCTTCTCTTTTCCCATATTATGGGCTGAAAC

mRNA sequence

ACAAGCACTCTATTTCCTCAAATTACATATCAAGCAAAACACCATTCAAACTCACTCACCCTTCTCTTGTTTCGAGTAAATTTTCGATATGGGAATCCATTTGCCATCAATTCTTCTTAATGCCAAGCACATTCTAAAAATGCAAGCTATGTCTACCAGAAATCAATCTAATGTTCCGAAAGGTCATATTGCAGTTTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTTCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAAAAGAAGAATTTGGATTTTGCCATCCGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGTTGCACACATCATGAATGAAAGTTGAAAGAACAAAAAAGAAATGTTCTCGATCACAGTTTTGTCACCTCCAAATTTTAGGAAGTAGAGTAGGATAATATTGTATAGTAACTTGGTTGTTTGAGCAATGGAAGTTGCATTCTTCTCTTACAAAAACATCTCTTTTGAGCTCGAATTTCAAATTTTATCAATTACTTTGTTTACCTCTCACTGCTTTAACATAACTGAAGACTAAACAGATCTGAAGTTTAAACTTGGTTTAATCGAATTAAATCGATAGGATTGGTAAAGTTTTTAACCAATAAATCGCCTTTTAACGACATTTGGAGGATCCAACACTTCTATATTACCAAAGTTCAGAAATATAGTTCCTCAGTTCTCATCAGATATTTCAATGGTAGCGGGCATAAATCCACATAGATTTCTCCAAACTATTAGACATAAAATTAAAAGTTCATAGACCTGTATTTGACACAGAACTAGCTGATAATATAACCTTAACCTTTCTATATAGAGCGATAAAGCTTCTCTTTTCCCATATTATGGGCTGAAAC

Coding sequence (CDS)

ATGGGAATCCATTTGCCATCAATTCTTCTTAATGCCAAGCACATTCTAAAAATGCAAGCTATGTCTACCAGAAATCAATCTAATGTTCCGAAAGGTCATATTGCAGTTTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTTCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAAAAGAAGAATTTGGATTTTGCCATCCGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGTTGCACACATCATGA

Protein sequence

MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS

Homology

[Close]

BLAST of Clc11G03920 vs. NCBI nr
Match: XP_011649278.1 (auxin-responsive protein SAUR21 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK +LKMQAMS RNQS+VPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03920 vs. NCBI nr
Match: XP_038901157.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 7.9e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK +LKMQAMS RNQS+VPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLN+S+EEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNKSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03920 vs. NCBI nr
Match: XP_038901158.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK +LKMQAMS RNQS+VPKGHIAVYVGEIQRKRFV+PISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVIPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHPMGGLTIPCRED FINLTAR+HTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDTFINLTARMHTS 97

[Close]

BLAST of Clc11G03920 vs. NCBI nr
Match: XP_022146171.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK ILKMQAMS RNQS+VPKG+IAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTSRLHTS 97

[Close]

BLAST of Clc11G03920 vs. NCBI nr
Match: XP_016902145.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045683.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99601.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK ILKMQAMS RNQS+VPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHP GGLTIPCREDAFINLTA+LHTS
Sbjct: 61 LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of Clc11G03920 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.7e-24
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   + ST   S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++S+EE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc11G03920 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.7e-24
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   A +    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++S+EE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARLH 96
          FGF HPMGGLTIPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Clc11G03920 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   + ST   S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++S+EE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc11G03920 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   + ST   S  PKG +AVYVGE Q+KR++VPISYL  PSF  LL++S+EE
Sbjct: 7  LLGAKKIL---SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTAR 94
          FGF HPMGGLTIPC ED FIN+T+R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Clc11G03920 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   + ST   S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++S++E
Sbjct: 7  LLGAKKIL---SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Clc11G03920 vs. ExPASy TrEMBL
Match: A0A5A7TQ57 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001750 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK ILKMQAMS RNQS+VPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHP GGLTIPCREDAFINLTA+LHTS
Sbjct: 61 LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of Clc11G03920 vs. ExPASy TrEMBL
Match: A0A6J1CYI0 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015450 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK ILKMQAMS RNQS+VPKG+IAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTSRLHTS 97

[Close]

BLAST of Clc11G03920 vs. ExPASy TrEMBL
Match: A0A1S4E2E4 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK ILKMQAMS RNQS+VPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHP GGLTIPCREDAFINLTA+LHTS
Sbjct: 61 LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of Clc11G03920 vs. ExPASy TrEMBL
Match: A0A5D3BIN4 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001760 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.3e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK +LKMQAMS RNQS+VPKG+IAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LL RS+EEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03920 vs. ExPASy TrEMBL
Match: A0A0A0LM74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258830 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.3e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGI LPSILLNAK ILKMQAMS RNQ +VPKGHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRS+EEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03920 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26
Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILKMQAMSTRNQSNVPKGHIAVYVGE-IQRKRFVVPISYLKHPSFV 60
          M I +  +L ++K +LK  + S+ N + +PKGH+AVYVGE +Q++RFVVP++YL HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 DLLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
           LL +++EEFGF HPMGGLTIPC E  FI+L +RL TS
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Clc11G03920 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 8.8e-26
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 1  MGIHLPSILLNAKHILK----MQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHP 60
          M I +P +L ++K IL+    + + S+ +  +VPKG++AVYVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVDLLNRSKEEFGFCHPMGGLTIPCREDAFINLTARLH 96
          SF DLL +++EEFGF HPMGGLTIPC E+ FI+L +R +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Clc11G03920 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MGIHLPSILLNAKHILKMQAMSTRNQS------NVPKGHIAVYVG---EIQRKRFVVPIS 60
           MG+   +I    K ILK+ +++ RN++      +VPKGH+AVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLKHPSFVDLLNRSKEEFGFCHPMGGLTIPCREDAFINLTA 93
           +L HPSF + L+R++EEFGF HPMGGLTIPCRE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of Clc11G03920 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   + ST   S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++S+EE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc11G03920 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKHILKMQAMSTRNQSNVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSKEE 68
          LL AK IL   A +    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++S+EE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARLH 96
          FGF HPMGGLTIPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

The following BLAST results are available for this feature:

BLAST of Clc11G03920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649278.1	3.6e-45	93.81	auxin-responsive protein SAUR21 [Cucumis sativus]	[more]
XP_038901157.1	7.9e-45	92.78	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_038901158.1	2.3e-44	90.72	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_022146171.1	3.0e-44	92.78	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_016902145.1	3.0e-44	92.78	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045683.1 aux...	[more]

BLAST of Clc11G03920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJG1	4.7e-24	63.95	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF6	4.7e-24	63.22	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FK62	1.0e-23	63.95	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	1.4e-23	64.71	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.4e-23	62.79	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]

BLAST of Clc11G03920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ57	1.5e-44	92.78	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1CYI0	1.5e-44	92.78	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A1S4E2E4	1.5e-44	92.78	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=...	[more]
A0A5D3BIN4	4.3e-44	91.75	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LM74	4.3e-44	92.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258830 PE=3 SV=1	[more]

BLAST of Clc11G03920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	6.7e-26	55.10	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	8.8e-26	53.54	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.1e-25	54.46	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	3.3e-25	63.95	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	3.3e-25	63.22	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 6.3E-26 score: 90.4
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..96
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G03920.1	Clc11G03920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin