
Clc11G02620 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTAGAATTTAAATCCACTTTAAGGGAGTTGAAAAACTAATATAAGAAAAAAAAAAGTTTGTTAGACAACAAATATAATATTTAAAAAAAAAAAAATTTGACTGCACTCATTAAAAATTGTCACGTGACAATTTATTTGTTTTAAAAATAATTATTTTATTGTATATAGAATAAAGTAAAATCATGAAACTCAAATGCAACTTAGACTGAACTTTAAGTATTGTTATTTTAAAAAACTTAAACTAAAAACAAAATGGTTATCAAACTAAATTACTATCTATCTCTCTCTCCCTCACACTCATTTTCAAATTCTTTAAAAGCTAAACTTTCTCTCTCTCTCTCTCTACATCTTCAAAAGCTAATAAGCACTCTTTCTCATTTCCATCTTCTCTACAAAAAGCTAATAAGCTTTCTCACTCCCTCTCTCATTTTCTTCTTCTTCAAAAGCTAAAAGCTCTCTATCTATTCTCATTTTCTTCTAATAATTCAAAAGCACTCTCTCTCATTTTCTTCTTCTACAAAACCTAAAAGCTAAAAAGCTCTCTCTCTTTCTCTTAATTTCTTCTTCATCAAAAGCAAAAAAATCTAGTTTAAAAGCTAAAGCCTTTCTGTAACTTTAACCCAAAGTACTTTTCGTTTTTCTTGCCAATGGAAAAAAGATTCAAACTAAGATTCTCACGCTTATTCCAATCCTCATTCTTCTCTTGCCGCTCCAAAAAAAATTCCGACATCCTCATTACACACAAACCCATTTCCAATTCCACCCCTCTTAAAACCCTCCCTTCCTTAATTTCTCCAAAACCCCCTCAACTTTCCTCTAATTACCCACCCAAATTTTCCCTAAATTCTTCCCTATTTACATTTCCACCCCCACCTGCCTCTTCTCCCATTATTTCCCCTCTCAAATCCCCACCTCTTTCCCACCTCAACGACTGTTTATCACGCCACAAAAACAAAGCCAAAATCAAGAGGAAAAAAAATCCCTCTCGGCCTGCAGCAACTCCACCGGCGCCGGAGGATTTCGGCGGCGCGTGGTGGTATGGTGGCAATGACGAAACAGAGGATGAAACAGAGACTCTGTTTTCTTCCCGGAGTCTAACGTCCGATTCCTCCGTCTCGCGCCGCCGCCGTCGACGGAGACATGGTCGCCGGAGACCAGAAAGGAAAGTGAAAGATGGGTTCTTTGCGGTGGTTAAAAACTCGTCGGATCCGTACAAGGATTTTAAGGCTTCAATGGCGGAAATGGTCGTTGAGAAGAAGATTTTCGGAGGGAAAGAATTGGAAGAGCTTTTGCAATGCTTTATTTCCCTCAATTCTCGCCATTATCATAAAGTTATTTTTGAAGTTTATTCGGAGATTAAAGAAGCTCTCTTTTTTCTCTGATTTTTAGGATTATTAGGTTTTGGAAAATTAGTTTAGAGGTTGCATGTAGACCGTTTAATCAATCTATATCCAATAGTTATTTTCTTTTCTCTCGCTCCA ATGGTTTAGAATTTAAATCCACTTTAAGGGAGTTGAAAAACTAATATAAGAAAAAAAAAAGTTTGTTAGACAACAAATATAATATTTAAAAAAAAAAAAATTTGACTGCACTCATTAAAAATTGTCACGTGACAATTTATTTGTTTTAAAAATAATTATTTTATTGTATATAGAATAAAGTAAAATCATGAAACTCAAATGCAACTTAGACTGAACTTTAAGTATTGTTATTTTAAAAAACTTAAACTAAAAACAAAATGGTTATCAAACTAAATTACTATCTATCTCTCTCTCCCTCACACTCATTTTCAAATTCTTTAAAAGCTAAACTTTCTCTCTCTCTCTCTCTACATCTTCAAAAGCTAATAAGCACTCTTTCTCATTTCCATCTTCTCTACAAAAAGCTAATAAGCTTTCTCACTCCCTCTCTCATTTTCTTCTTCTTCAAAAGCTAAAAGCTCTCTATCTATTCTCATTTTCTTCTAATAATTCAAAAGCACTCTCTCTCATTTTCTTCTTCTACAAAACCTAAAAGCTAAAAAGCTCTCTCTCTTTCTCTTAATTTCTTCTTCATCAAAAGCAAAAAAATCTAGTTTAAAAGCTAAAGCCTTTCTGTAACTTTAACCCAAAGTACTTTTCGTTTTTCTTGCCAATGGAAAAAAGATTCAAACTAAGATTCTCACGCTTATTCCAATCCTCATTCTTCTCTTGCCGCTCCAAAAAAAATTCCGACATCCTCATTACACACAAACCCATTTCCAATTCCACCCCTCTTAAAACCCTCCCTTCCTTAATTTCTCCAAAACCCCCTCAACTTTCCTCTAATTACCCACCCAAATTTTCCCTAAATTCTTCCCTATTTACATTTCCACCCCCACCTGCCTCTTCTCCCATTATTTCCCCTCTCAAATCCCCACCTCTTTCCCACCTCAACGACTGTTTATCACGCCACAAAAACAAAGCCAAAATCAAGAGGAAAAAAAATCCCTCTCGGCCTGCAGCAACTCCACCGGCGCCGGAGGATTTCGGCGGCGCGTGGTGGTATGGTGGCAATGACGAAACAGAGGATGAAACAGAGACTCTGTTTTCTTCCCGGAGTCTAACGTCCGATTCCTCCGTCTCGCGCCGCCGCCGTCGACGGAGACATGGTCGCCGGAGACCAGAAAGGAAAGTGAAAGATGGGTTCTTTGCGGTGGTTAAAAACTCGTCGGATCCGTACAAGGATTTTAAGGCTTCAATGGCGGAAATGGTCGTTGAGAAGAAGATTTTCGGAGGGAAAGAATTGGAAGAGCTTTTGCAATGCTTTATTTCCCTCAATTCTCGCCATTATCATAAAGTTATTTTTGAAGTTTATTCGGAGATTAAAGAAGCTCTCTTTTTTCTCTGATTTTTAGGATTATTAGGTTTTGGAAAATTAGTTTAGAGGTTGCATGTAGACCGTTTAATCAATCTATATCCAATAGTTATTTTCTTTTCTCTCGCTCCA ATGGAAAAAAGATTCAAACTAAGATTCTCACGCTTATTCCAATCCTCATTCTTCTCTTGCCGCTCCAAAAAAAATTCCGACATCCTCATTACACACAAACCCATTTCCAATTCCACCCCTCTTAAAACCCTCCCTTCCTTAATTTCTCCAAAACCCCCTCAACTTTCCTCTAATTACCCACCCAAATTTTCCCTAAATTCTTCCCTATTTACATTTCCACCCCCACCTGCCTCTTCTCCCATTATTTCCCCTCTCAAATCCCCACCTCTTTCCCACCTCAACGACTGTTTATCACGCCACAAAAACAAAGCCAAAATCAAGAGGAAAAAAAATCCCTCTCGGCCTGCAGCAACTCCACCGGCGCCGGAGGATTTCGGCGGCGCGTGGTGGTATGGTGGCAATGACGAAACAGAGGATGAAACAGAGACTCTGTTTTCTTCCCGGAGTCTAACGTCCGATTCCTCCGTCTCGCGCCGCCGCCGTCGACGGAGACATGGTCGCCGGAGACCAGAAAGGAAAGTGAAAGATGGGTTCTTTGCGGTGGTTAAAAACTCGTCGGATCCGTACAAGGATTTTAAGGCTTCAATGGCGGAAATGGTCGTTGAGAAGAAGATTTTCGGAGGGAAAGAATTGGAAGAGCTTTTGCAATGCTTTATTTCCCTCAATTCTCGCCATTATCATAAAGTTATTTTTGAAGTTTATTCGGAGATTAAAGAAGCTCTCTTTTTTCTCTGA MEKRFKLRFSRLFQSSFFSCRSKKNSDILITHKPISNSTPLKTLPSLISPKPPQLSSNYPPKFSLNSSLFTFPPPPASSPIISPLKSPPLSHLNDCLSRHKNKAKIKRKKNPSRPAATPPAPEDFGGAWWYGGNDETEDETETLFSSRSLTSDSSVSRRRRRRRHGRRRPERKVKDGFFAVVKNSSDPYKDFKASMAEMVVEKKIFGGKELEELLQCFISLNSRHYHKVIFEVYSEIKEALFFL Homology
BLAST of Clc11G02620 vs. NCBI nr
Match: TYK10717.1 (transcription repressor OFP8-like [Cucumis melo var. makuwa]) HSP 1 Score: 379.8 bits (974), Expect = 1.8e-101 Identity = 210/247 (85.02%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of Clc11G02620 vs. NCBI nr
Match: KAA0061555.1 (transcription repressor OFP8-like [Cucumis melo var. makuwa]) HSP 1 Score: 379.4 bits (973), Expect = 2.3e-101 Identity = 210/249 (84.34%), Postives = 217/249 (87.15%), Query Frame = 0
BLAST of Clc11G02620 vs. NCBI nr
Match: XP_008460883.1 (PREDICTED: transcription repressor OFP8-like [Cucumis melo]) HSP 1 Score: 379.4 bits (973), Expect = 2.3e-101 Identity = 210/249 (84.34%), Postives = 217/249 (87.15%), Query Frame = 0
BLAST of Clc11G02620 vs. NCBI nr
Match: XP_011650094.1 (transcription repressor OFP8 [Cucumis sativus] >KGN60618.1 hypothetical protein Csa_019363 [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 2.6e-100 Identity = 210/251 (83.67%), Postives = 219/251 (87.25%), Query Frame = 0
BLAST of Clc11G02620 vs. NCBI nr
Match: XP_038890823.1 (transcription repressor OFP8-like [Benincasa hispida]) HSP 1 Score: 372.9 bits (956), Expect = 2.2e-99 Identity = 204/246 (82.93%), Postives = 212/246 (86.18%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy Swiss-Prot
Match: Q3E9B4 (Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.5e-23 Identity = 92/258 (35.66%), Postives = 131/258 (50.78%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy Swiss-Prot
Match: Q3EAL1 (Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-11 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy Swiss-Prot
Match: Q9ZU65 (Transcription repressor OFP7 OS=Arabidopsis thaliana OX=3702 GN=OFP7 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10 Identity = 88/307 (28.66%), Postives = 131/307 (42.67%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy Swiss-Prot
Match: Q9LZW2 (Transcription repressor OFP1 OS=Arabidopsis thaliana OX=3702 GN=OFP1 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 8.2e-09 Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy Swiss-Prot
Match: O04351 (Transcription repressor OFP2 OS=Arabidopsis thaliana OX=3702 GN=OFP2 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy TrEMBL
Match: A0A5D3CFF5 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00260 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 8.6e-102 Identity = 210/247 (85.02%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy TrEMBL
Match: A0A5A7V6T9 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001170 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101 Identity = 210/249 (84.34%), Postives = 217/249 (87.15%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy TrEMBL
Match: A0A1S3CDH1 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103499623 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101 Identity = 210/249 (84.34%), Postives = 217/249 (87.15%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy TrEMBL
Match: A0A0A0LFV7 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_2G004680 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100 Identity = 210/251 (83.67%), Postives = 219/251 (87.25%), Query Frame = 0
BLAST of Clc11G02620 vs. ExPASy TrEMBL
Match: A0A6J1FDL1 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111444408 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.9e-81 Identity = 186/255 (72.94%), Postives = 202/255 (79.22%), Query Frame = 0
BLAST of Clc11G02620 vs. TAIR 10
Match: AT5G19650.1 (ovate family protein 8 ) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-24 Identity = 92/258 (35.66%), Postives = 131/258 (50.78%), Query Frame = 0
BLAST of Clc11G02620 vs. TAIR 10
Match: AT3G52525.1 (ovate family protein 6 ) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Clc11G02620 vs. TAIR 10
Match: AT2G18500.1 (ovate family protein 7 ) HSP 1 Score: 66.6 bits (161), Expect = 3.1e-11 Identity = 88/307 (28.66%), Postives = 131/307 (42.67%), Query Frame = 0
BLAST of Clc11G02620 vs. TAIR 10
Match: AT2G36026.1 (Ovate family protein ) HSP 1 Score: 66.6 bits (161), Expect = 3.1e-11 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Clc11G02620 vs. TAIR 10
Match: AT5G01840.1 (ovate family protein 1 ) HSP 1 Score: 62.4 bits (150), Expect = 5.9e-10 Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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