Clc11G01590 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G01590
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionGuanine nucleotide-binding protein subunit gamma 3-like
LocationClcChr11: 1638371 .. 1640302 (+)
RNA-Seq ExpressionClc11G01590
SyntenyClc11G01590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACTCCCACTCGCCCAACTTCCTCTTCTTCTTCTTCTTCAATTCCATCTCTCCCACCCCCTTACCCCAAGTCTCCTCCTGAGTATCCTGATTTGTATGGAAAGCGCCGACAAGCCGCCAAGACTCAGATGCTCGAGAGGGAGATTGGTTTTCTCGAGGTTCATTCCATTTTTCTCTGTTTTTTTTTTTTTTTTTCTTTTTCTTCTTTTAATTTCCAATGCATGCGAATGCCCTTTCTGAAGAAACTGCTTCTCCTTCACAACTCAATTGAAACCCGTGTCTTGGATGTAATTATAACTGAAATTGACAATGTTTTGCTGTCCATTTCAGATCCCCATTGTTGAGTTTTTGGAAACCTTTTAGGGTTTTGTCCCCCTTGTATTATTTGGGTCGGTTAAGTGTGGGGTGGGGTACCGACTGGGGCATCCCTCAAGTCACACTTCACCGTTTTATGTCTTCAGCTCTCAATATGTTACAAACCAAAAGGATTATTTATTTGCACTTTTGTCCCAAAATCAGTTGTCACCAATTGGTTTACCTCTTTGATTTTGTCTCTTGTTCTTTTCTTTTAAAGGTTCTCGTTGAAGGTCTAATGTAGATGTTTAATTACATTTTGTTCCTTTCCCTTGAACATTTTGAGCTCTTGTTTCACTGTATTGAATACCCTAAGACATCTTTCCCTACAAAGTTTAAGGAAAAAGTATGGGAACTGAACAGTGAACACTAACCTATGAGATTGTTGATGCTTCTTCAAATATAGATTTTGAGTTTTGCTTACAAGAGAAATTCCATTTCCGATGATGTTCAACCTAATCATTTTTCTCCTGACTTCCTGATTCATTATGAAAAATTAACAACCTTTTTCTTGGAAATGTCTCTGGAGCAGGAAGAATTGAAGTCTACTGAAGGTCTTCAACCTGCATCTAAATGCTGCAAAGAGTACGTATGCCAATTTATTTTCAGAATACTTTGAACTTTTACTTCGGAATGAGTTGGATTTTTTGGCCCATCCAGTTAGCTACCATTTAGTTGATTTGTGTTTTTCTTACACTTTGCAGGGTAGCTGACTATGTGATCGCCAACTCAGATCCCTTGATACCAACGTAAGGGGTTTCTCATCATTTAATTTTCTAAAATCCTTTGTAGTTTATTGTTCAAGATACATGTTTCTTCTTTTACATGTTTCTTCTTTTAATCAGATATAAGAAGCATCGTCGCAGATGTCAATTTTGGAAATGGCTCTGGTATGACTCTCACCTTATCATTTATGCCTTTCTATGGAGTAGAAATAATTAGTGAATTGACCTAAGTTTCTCCCACTTTTGCTATTAGGCTAGTCTAGCTTCCTAGTTGTAATCATAGGTTAATGTGAATTTATAAGGCTTCATTTATGTTTGCTTATAGCGAGCAATCTCTAATTAGACAATAGGTGTCATTTGTGGTTGGAAACTATGAAGATACTGACAGAATCAAATACTAGACCATTTACTACCTAAAATAAAAGCCTGGAGTTCCTCACTACCTTTGCTAATTGAAGCAGAAATGTCTCCCATATTGTATGTGGACTCTCTGCATTTTGCATATTATGGGTATCGGCTAGTGCATTTGACACAGGTTAATTCTCACTTGATGCAGTGGATTCCCCTGTTGTAAGTTATCCTGGATTTGCTGTTGCTGTTATGCTGGATGCTCGATCCATCTCGAAATCCCACCCTGCTGCAATTGTAATAACCCATGTAAATGCTTATCATGCGGCAGCTGTAAATTACCGAAGTGGCAGTGTTGCGGAGAGTGCAGGGAGTGTTGTGGGCAGTGTGGCCAATGTTGTTGCACTTGCCCAACATTACCCCAATGCACATGCCCTTGTCCAACCATCTCATGCACTCAATGTTGTAGCCATTTTTCATTACCTTCCTGCTCCTGCCTAG

mRNA sequence

ATGGCTACTCCCACTCGCCCAACTTCCTCTTCTTCTTCTTCTTCAATTCCATCTCTCCCACCCCCTTACCCCAAGTCTCCTCCTGAGTATCCTGATTTGTATGGAAAGCGCCGACAAGCCGCCAAGACTCAGATGCTCGAGAGGGAGATTGGTTTTCTCGAGATTTTGAGTTTTGCTTACAAGAGAAATTCCATTTCCGATGATGTTCAACCTAATCATTTTTCTCCTGACTTCCTGATTCATTATGAAAAATTAACAACCTTTTTCTTGGAAATGTCTCTGGAGCAGGAAGAATTGAAGTCTACTGAAGGTCTTCAACCTGCATCTAAATGCTGCAAAGAGGTAGCTGACTATGTGATCGCCAACTCAGATCCCTTGATACCAACAAGCATCGTCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTGTTGTAAGTTATCCTGGATTTGCTGTTGCTGTTATGCTGGATGCTCGATCCATCTCGAAATCCCACCCTGCTGCAATTGTAATAACCCATGTAAATGCTTATCATGCGGCAGCTGTAAATTACCGAAGTGGCAGTGTTGCGGAGAGTGCAGGGAGTGTTGTGGGCAGTGTGGCCAATGTTGTTGCACTTGCCCAACATTACCCCAATGCACATGCCCTTGTCCAACCATCTCATGCACTCAATGTTGTAGCCATTTTTCATTACCTTCCTGCTCCTGCCTAG

Coding sequence (CDS)

ATGGCTACTCCCACTCGCCCAACTTCCTCTTCTTCTTCTTCTTCAATTCCATCTCTCCCACCCCCTTACCCCAAGTCTCCTCCTGAGTATCCTGATTTGTATGGAAAGCGCCGACAAGCCGCCAAGACTCAGATGCTCGAGAGGGAGATTGGTTTTCTCGAGATTTTGAGTTTTGCTTACAAGAGAAATTCCATTTCCGATGATGTTCAACCTAATCATTTTTCTCCTGACTTCCTGATTCATTATGAAAAATTAACAACCTTTTTCTTGGAAATGTCTCTGGAGCAGGAAGAATTGAAGTCTACTGAAGGTCTTCAACCTGCATCTAAATGCTGCAAAGAGGTAGCTGACTATGTGATCGCCAACTCAGATCCCTTGATACCAACAAGCATCGTCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTGTTGTAAGTTATCCTGGATTTGCTGTTGCTGTTATGCTGGATGCTCGATCCATCTCGAAATCCCACCCTGCTGCAATTGTAATAACCCATGTAAATGCTTATCATGCGGCAGCTGTAAATTACCGAAGTGGCAGTGTTGCGGAGAGTGCAGGGAGTGTTGTGGGCAGTGTGGCCAATGTTGTTGCACTTGCCCAACATTACCCCAATGCACATGCCCTTGTCCAACCATCTCATGCACTCAATGTTGTAGCCATTTTTCATTACCTTCCTGCTCCTGCCTAG

Protein sequence

MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAYKRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIVADVNFGNGSVDSPVVSYPGFAVAVMLDARSISKSHPAAIVITHVNAYHAAAVNYRSGSVAESAGSVVGSVANVVALAQHYPNAHALVQPSHALNVVAIFHYLPAPA
Homology
[Close]
BLAST of Clc11G01590 vs. NCBI nr
Match: KAG7030517.1 (Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.9 bits (712), Expect = 4.2e-71
Identity = 161/238 (67.65%), Postives = 171/238 (71.85%), Query Frame = 0 

Query: 1   MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAY 60
           MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAK QMLEREIGFLE      
Sbjct: 1   MATPTRP---ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKLQMLEREIGFLE------ 60

Query: 61  KRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVI 120
                                               EELKSTEGL PAS+CCKEVAD+VI
Sbjct: 61  ------------------------------------EELKSTEGLPPASRCCKEVADHVI 120

Query: 121 ANSDPLIPTSIVADVNFGNGSVDSPVVSYPGFAVAVMLDARSISKSHPAAIVITHVNAYH 180
           ANSDPLIPTSI ADVNFGNGSVDSPVV+YPGFAVAVMLDARSI KSHPAA VI HVNAY 
Sbjct: 121 ANSDPLIPTSIAADVNFGNGSVDSPVVNYPGFAVAVMLDARSILKSHPAATVIIHVNAYR 180

Query: 181 AAAVNYRSGSVAESAGSVVGSVANVVALAQHYPNAHALVQPSHALNVVAIFHYLPAPA 239
            AAVNY SGSVA  AGSV      +V+L Q YP+A A+VQPSHA NVVA+ HYLPAPA
Sbjct: 181 VAAVNYPSGSVAAGAGSV-----GIVSLVQRYPDARAVVQPSHAANVVAVVHYLPAPA 188

[Close]
BLAST of Clc11G01590 vs. NCBI nr
Match: KAA0061462.1 (guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuwa] >TYK10812.1 guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-63
Identity = 162/259 (62.55%), Postives = 169/259 (65.25%), Query Frame = 0 

Query: 2   ATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAYK 61
           ATPTRP SSSSSSSI   PPPYPKSPP+YPDLYGKRRQAAK QML+REIGFLE       
Sbjct: 3   ATPTRPPSSSSSSSI---PPPYPKSPPQYPDLYGKRRQAAKLQMLDREIGFLE------- 62

Query: 62  RNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVIA 121
                                              EELKSTEGLQPASKCCKEVADYVIA
Sbjct: 63  -----------------------------------EELKSTEGLQPASKCCKEVADYVIA 122

Query: 122 NSDPLIPTS----------------------IVADVNFGNGSVDSPVVSYPGFAVAVMLD 181
           NSDP+IPT                       ++A +N     VDSPVVSYPGFAVAVMLD
Sbjct: 123 NSDPMIPTYKKHRRRCQFWKWLCNKALPKIWLIAIINL-KLEVDSPVVSYPGFAVAVMLD 182

Query: 182 ARSISKSHPAAIVITHVNAYHAAAVNYRSGSVAESAGSVVGSVANVVALAQHYPNAHALV 239
           ARSISKS PAA VIT VNAY  AAVNYRSG V    GSVVGSV  +VAL QHYPNAHALV
Sbjct: 183 ARSISKSLPAATVITLVNAYRVAAVNYRSGCV---VGSVVGSV-GIVALVQHYPNAHALV 211

[Close]
BLAST of Clc11G01590 vs. NCBI nr
Match: KAG7021355.1 (hypothetical protein SDJN02_18044, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.2 bits (435), Expect = 5.5e-39
Identity = 103/159 (64.78%), Postives = 110/159 (69.18%), Query Frame = 0 

Query: 92  MSLEQEELKSTEGLQPASKCCKE-------------VADYVIANSDPLIPTSIVADVNFG 151
           MSL QE+LKST+GLQPAS+CCKE             VADYV+A SDPLI TSI ADVNFG
Sbjct: 1   MSLGQEDLKSTDGLQPASRCCKEYIFCSSSTRTLCRVADYVVAKSDPLITTSIAADVNFG 60

Query: 152 NGS-VDSPVVSYPGFAVAVMLDARSISKSHPAAIVITHVNAYHAAAVNYRSGSVAESAGS 211
           NGS VDSP VS  GFAVA MLDARSISK+HPA  VI HVNAYHAAAV Y+SGS       
Sbjct: 61  NGSAVDSPAVSCRGFAVAAMLDARSISKTHPAVAVIIHVNAYHAAAVTYQSGS------- 120

Query: 212 VVGSVANVVALAQHYPNAHALVQPSHALNVVAIFHYLPA 237
                   VAL QHYP+AHAL Q  HA N V IFHYL A
Sbjct: 121 --------VALVQHYPDAHALAQSFHAAN-VTIFHYLHA 143

[Close]
BLAST of Clc11G01590 vs. NCBI nr
Match: XP_038889974.1 (guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida] >XP_038889975.1 guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida] >XP_038889976.1 guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida])

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-28
Identity = 82/129 (63.57%), Postives = 83/129 (64.34%), Query Frame = 0 

Query: 1   MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAY 60
           M TPTRP  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAK QMLEREIGFLE      
Sbjct: 1   MTTPTRP-PSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLE------ 60

Query: 61  KRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVI 120
                                               EELKSTEGLQPASKCCKEVA+YVI
Sbjct: 61  ------------------------------------EELKSTEGLQPASKCCKEVAEYVI 86

Query: 121 ANSDPLIPT 130
           ANSDPLIPT
Sbjct: 121 ANSDPLIPT 86

[Close]
BLAST of Clc11G01590 vs. NCBI nr
Match: KAF3439696.1 (hypothetical protein FNV43_RR17974 [Rhamnella rubrinervis])

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-27
Identity = 98/228 (42.98%), Postives = 120/228 (52.63%), Query Frame = 0 

Query: 13  SSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAYKRNSISDDVQPN 72
           SSS+PSLPPP PKSPPEYPDLYGKRR+ AK QMLEREIGFLE                  
Sbjct: 8   SSSVPSLPPPCPKSPPEYPDLYGKRREMAKVQMLEREIGFLE------------------ 67

Query: 73  HFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIV 132
                                   EELKS   +QP+S+CCKE+ D+V AN DPLIPT I 
Sbjct: 68  ------------------------EELKSVNRIQPSSRCCKEIVDFVNANPDPLIPT-IA 127

Query: 133 ADVNFGNGSVDSPVVSYPGFAVAVMLDARSISKSHPAAIVITHVNAYHAAAVNYRSGSVA 192
             V  GNGSV+SP ++  GFAVAVML A        A I + HV A+  + V ++SG  A
Sbjct: 128 GHVASGNGSVESPALTSHGFAVAVMLGAPFTWNCRAAGIAV-HVIAFLVSLVEFQSGDAA 172

Query: 193 ESAGSVVGSVANVVALAQHYPNAHALVQPSHALNVVA--IFHYLPAPA 239
                    V++++A           V+  HA  +VA  +FH L A A
Sbjct: 188 H--------VSDLLA-----------VKRFHAAEIVAFQVFHTLIALA 172

[Close]
BLAST of Clc11G01590 vs. ExPASy Swiss-Prot
Match: Q6AWT8 (Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=3702 GN=GG3 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 59/119 (49.58%), Postives = 68/119 (57.14%), Query Frame = 0 

Query: 10  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAYKRNSISDDV 69
           SSSS +  SLPPP PKSPPEYPDLYGKRR+AA+ QMLEREIGFLE               
Sbjct: 21  SSSSLAPSSLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGFLE--------------- 80

Query: 70  QPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVIANSDPLIP 129
                                       E+K  EG+QPAS+C KEV+D+V+ANSDPLIP
Sbjct: 81  ---------------------------GEIKFIEGVQPASRCIKEVSDFVVANSDPLIP 97

[Close]
BLAST of Clc11G01590 vs. ExPASy TrEMBL
Match: A0A5A7UZX5 (Guanine nucleotide-binding protein subunit gamma 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001280 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 5.3e-64
Identity = 162/259 (62.55%), Postives = 169/259 (65.25%), Query Frame = 0 

Query: 2   ATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAYK 61
           ATPTRP SSSSSSSI   PPPYPKSPP+YPDLYGKRRQAAK QML+REIGFLE       
Sbjct: 3   ATPTRPPSSSSSSSI---PPPYPKSPPQYPDLYGKRRQAAKLQMLDREIGFLE------- 62

Query: 62  RNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVIA 121
                                              EELKSTEGLQPASKCCKEVADYVIA
Sbjct: 63  -----------------------------------EELKSTEGLQPASKCCKEVADYVIA 122

Query: 122 NSDPLIPTS----------------------IVADVNFGNGSVDSPVVSYPGFAVAVMLD 181
           NSDP+IPT                       ++A +N     VDSPVVSYPGFAVAVMLD
Sbjct: 123 NSDPMIPTYKKHRRRCQFWKWLCNKALPKIWLIAIINL-KLEVDSPVVSYPGFAVAVMLD 182

Query: 182 ARSISKSHPAAIVITHVNAYHAAAVNYRSGSVAESAGSVVGSVANVVALAQHYPNAHALV 239
           ARSISKS PAA VIT VNAY  AAVNYRSG V    GSVVGSV  +VAL QHYPNAHALV
Sbjct: 183 ARSISKSLPAATVITLVNAYRVAAVNYRSGCV---VGSVVGSV-GIVALVQHYPNAHALV 211

[Close]
BLAST of Clc11G01590 vs. ExPASy TrEMBL
Match: A0A6J1KGS0 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493745 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-27
Identity = 78/129 (60.47%), Postives = 82/129 (63.57%), Query Frame = 0 

Query: 1   MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAY 60
           MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAK QMLEREIGFLE      
Sbjct: 1   MATPTRP---ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLE------ 60

Query: 61  KRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVI 120
                                               EELKSTEGL PAS+CCKEVAD+VI
Sbjct: 61  ------------------------------------EELKSTEGLPPASRCCKEVADHVI 84

Query: 121 ANSDPLIPT 130
           ANSDPLIPT
Sbjct: 121 ANSDPLIPT 84

[Close]
BLAST of Clc11G01590 vs. ExPASy TrEMBL
Match: A0A6J1KJF9 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493745 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-27
Identity = 78/129 (60.47%), Postives = 82/129 (63.57%), Query Frame = 0 

Query: 1   MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAY 60
           MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAK QMLEREIGFLE      
Sbjct: 1   MATPTRP---ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLE------ 60

Query: 61  KRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVI 120
                                               EELKSTEGL PAS+CCKEVAD+VI
Sbjct: 61  ------------------------------------EELKSTEGLPPASRCCKEVADHVI 84

Query: 121 ANSDPLIPT 130
           ANSDPLIPT
Sbjct: 121 ANSDPLIPT 84

[Close]
BLAST of Clc11G01590 vs. ExPASy TrEMBL
Match: A0A6J1G3W8 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450505 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-27
Identity = 78/129 (60.47%), Postives = 82/129 (63.57%), Query Frame = 0 

Query: 1   MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAY 60
           MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAK QMLEREIGFLE      
Sbjct: 1   MATPTRP---ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLE------ 60

Query: 61  KRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVI 120
                                               EELKSTEGL PAS+CCKEVAD+VI
Sbjct: 61  ------------------------------------EELKSTEGLPPASRCCKEVADHVI 84

Query: 121 ANSDPLIPT 130
           ANSDPLIPT
Sbjct: 121 ANSDPLIPT 84

[Close]
BLAST of Clc11G01590 vs. ExPASy TrEMBL
Match: A0A6J1G3S6 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450505 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-27
Identity = 78/129 (60.47%), Postives = 82/129 (63.57%), Query Frame = 0 

Query: 1   MATPTRPTSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAY 60
           MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAK QMLEREIGFLE      
Sbjct: 1   MATPTRP---ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLE------ 60

Query: 61  KRNSISDDVQPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVI 120
                                               EELKSTEGL PAS+CCKEVAD+VI
Sbjct: 61  ------------------------------------EELKSTEGLPPASRCCKEVADHVI 84

Query: 121 ANSDPLIPT 130
           ANSDPLIPT
Sbjct: 121 ANSDPLIPT 84

[Close]
BLAST of Clc11G01590 vs. TAIR 10
Match: AT5G20635.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-21
Identity = 59/119 (49.58%), Postives = 68/119 (57.14%), Query Frame = 0 

Query: 10  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKTQMLEREIGFLEILSFAYKRNSISDDV 69
           SSSS +  SLPPP PKSPPEYPDLYGKRR+AA+ QMLEREIGFLE               
Sbjct: 21  SSSSLAPSSLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGFLE--------------- 80

Query: 70  QPNHFSPDFLIHYEKLTTFFLEMSLEQEELKSTEGLQPASKCCKEVADYVIANSDPLIP 129
                                       E+K  EG+QPAS+C KEV+D+V+ANSDPLIP
Sbjct: 81  ---------------------------GEIKFIEGVQPASRCIKEVSDFVVANSDPLIP 97

The following BLAST results are available for this feature:
BLAST of Clc11G01590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7030517.14.2e-7167.65Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrospe... [more]
KAA0061462.11.1e-6362.55guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuw... [more]
KAG7021355.15.5e-3964.78hypothetical protein SDJN02_18044, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038889974.12.6e-2863.57guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida] >XP_... [more]
KAF3439696.11.7e-2742.98hypothetical protein FNV43_RR17974 [Rhamnella rubrinervis][more]
BLAST of Clc11G01590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6AWT81.3e-1949.58Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=37... [more]
BLAST of Clc11G01590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UZX55.3e-6462.55Guanine nucleotide-binding protein subunit gamma 3-like OS=Cucumis melo var. mak... [more]
A0A6J1KGS06.8e-2760.47guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita ... [more]
A0A6J1KJF96.8e-2760.47guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita ... [more]
A0A6J1G3W86.8e-2760.47guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita ... [more]
A0A6J1G3S66.8e-2760.47guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita ... [more]
BLAST of Clc11G01590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G20635.19.4e-2149.58FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR32378GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3coord: 96..130
NoneNo IPR availablePANTHERPTHR32378GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3coord: 6..54
NoneNo IPR availablePANTHERPTHR32378:SF10GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3coord: 6..54
coord: 96..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G01590.2Clc11G01590.2mRNA