Clc11G00400 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCAATGAAGAAGGTTTTAATAACGGGAGTGGGTAAAGGGTTGGGAAGAGCATTGGCAATGGAGTTGGCAAAGTTTGGTCACATTATTATTGGTTGCTCTCGTACCCAAAACAACCTCCATTTCCTTAAACAACACCTCCACAACATCTCTCCACACAACCATTTGCTCCTCAACATTGATGTGGTATATATAGCAATTTAGTTTTTCTTTTTACTTCTTTTTCTATTTTTTATTTACTAATGCTTTACATACACCTATCTCCTATCTCCATGCATCTTTCAATCACAAATTATACATATATATATCTAATAATAATAATAAAAAAAAAGTTTGCTCCACAATAACTCGTAATAGGACACTTAGGTGGTCTGCACAAAGATGAGTGCAACTAGGAATGCGTATAAGTATTATCTACTATTTTATCTTTTACGCCAATATTGTAGATCTTTTCTCCTCATCCAAAAACTTGATTAAGTTCTAAAAGAGTAAGGTCAAGAGAGAGAAACACAATCCTTTAGAAGACTGTTATCATGGATTAATGTTATTGTGAAAATCATCTAGCTAGTTCAAAGATCTTGACATTTATTGTTTTATACAATATTAGGGTTTTATTGTATACTCACGAAGTTAAAACTTACACAGAACTCATTCGCGATCGTGGAATCACACCCATTGCAAATTGATGAAATCTCAAACACGATTTGAAGGTGCATCACAATTTTATAAAAATACAAATTCTCACCCGTTTTTAAAAATTTTGCGATTTTATGATCACTTTTCTCAAACGTGAAATAATGGTGGTCGAAGTCTCATCAATTTGCGTTGGGTGAGACCCGTGATCTCGAATTGACAATTTAACATTGGTCATTGTTTTACGAGGTAAGCAAAATATTAACTTTGATTACTTTTAGAATTCAAATGTTATCATTTTAGATTGAGGAAACCAAAATTATATCATCCGTACACAAAAGCTCATTACTTTTGATGCCTAAAATTGATTAGAGCTGTGGTTTTGTAGAGTTCCAACGACAGTGTTAAGGAGATGGCAGGAATTGTTGTGGACAAAATAGGAGTTCCTGATATAATTGGTATTTAATTAATTATGCCTTATAATACATCAAATTTGTTCTTAATTATAACTCCCTTTTCCATTCCATTGAAAAGATTAAAATTGTATGTGTTTTGATTTTGACAGTAAACAATGCGGGTGTGTTTAATGGGCAACGCAAGATTTGGGAGATTACTAAACAAGAGTTTGACAATGTGATTGACATAAATATAAAGGGCACAGCAAATGTGTTACGCCACTTTATTCCACTCATGATTCCTAAAAACCAAGGCATCATTGTTAATGTGTCTTCTATCTTGGCAACAATGGGAGTTGCTACCGTACGTATATCAACCAAGTTTAAACTAAAAATTGTCTTCTTCTCTTAGTCTTTAAATTTTGAATTCAATTTTCAAAAAAGTTACACTTTTAGTCCTTAAGTTTTGAGTTTTTATATATATATATATATATATATATATATTTAAATTTAGTCACTTAGTTTAAAAATGTTGCAAGTGAAAAACAAGTGAATCTAACAAAACAGCCTATAAGTCAAACACAATGTTATAGACACAATATGAAACAAAACAATTAGATATAAAAAGGCAGTTCGATGTAATCACACCTACGCCTAGAGGCAAAGAGTCCAATGAAAAGAACTTTACTAAAAAGTTATGTGATTACAAGAATATACTTATCTGATAGTACACACTATCTTAACTCACAAGTAGCTTTACTCCTAATGATGAGTTTAGACCCCTCTAAACTAGAGACTCATTTTCTTGAATCTATGCAATTCTTTTGATCTCATGTATGAACCATATTCAAACATAATTATAAAGGTTCACCTTCAAAAAGGTCTTTCGTACACACAAATGTATCGCTCAACAGAAAATAAATCATTCGAAAATAAAGACCAACTTGTAAATTAGACCCAAAACTTTGAAGACTAGAAAAGATATTTTTCCAAGTTTAAATAAGTTTTTATTGTCAAATTAAACTTCAAACGTCTAGCATTAATTTTTACCTAATTAACTATCTTTATATTTTTGTGATATAGGCATCGGCATATTGTAGCTCAAAATGGGCGATCGAAGGCTTAAGTAAATCAGTAGCCAAAGAGATACCAAATGGAATGACGATTGTGGCCTTGGATCCTGGCATTGTAAATACAGATTTGGTATTTACTTTATTGGGTAATATTGCATCTCAATATCAAACTCCTTCCATATGGTAAGTTTATCTAGGCTTCCTTTGATAATTTTTTTTTTTAATTTTTAAAATTATATCTATGAACGCAATTTCTATTTCAAAATTTTTTTGTTTTATTATCTACATTTTACCGATAGTTTAAAAAATTATACTGTATTTTGAAAATTAAAAAAAAAATAGTTTTTAAGAACTTGTTTTTGTTTTTCGAATTTTGCTAGTCATTTACTTAAGAAAGATGCAAGTCATTGTAAGAAATTGAGATGGAATTAAGCTTTATTTTTAAAAACTAAAACCTAAAAACTAAGTGGTTACCAAGTGAGGCCTTGATTTTTAGTTTTTAGTTTTTGAAAATTAAGCTTAAAAATACTAATTTCAACTTTAAATTTTTGTTTTGTTATCTACTTTTTACCTATTCTAAAAGTCAAACCAAGTTTTGAAAATTAATAATAATAATAATAATAATAGTTTTTAAAAAATTATTTTTGTTTATGGAATTTTATTAGGAATTCAACTATTTTAATTAAGAAAATTGCAAACTATTATAAGAAATTGAGAGAAAATAAGATAAATTTTCAAAAATCAAAAACAAAAAATGAAATGGCTAAAAAAAAAAATTAGTTATTTGTATTTACATTGAATATTATATATATTATAATAATTTACTTGATGAATTATGATAGGGCTATGAAAGCAGCTCCGATGATATTAAATCTTACACGTATGGATAATGGAGCATCTCTCACGGTTGATGATCCTGGCGTTCTACCATTCTAATAATTCCGTACCAAGTTTAGAAGCAATATATTTCAATGAATTTCAATTAGGTGTTTGTACTTTTTATTTCTATATTGTCACTAGTTGAACTTGAGGCTTTTATAAACTAATTTTCTAATTTTATAAAATCTTATATTTTGTCAGAATATATATTTATTAATACTATAGATAAAATTATAAATCAATGATATAGGTTTAAGAAATTCAGTAACATATTATTAAGTATACAACACCCTTAGTTACAAACACCATGTAAAGTAGTCAATCATTCATGTGGGTGGTGTGATTGGATTTAAATTAATGTGATAAAATGGTCTTAAAGACGTGATTATATTAAAAAGAATGGAGAGACTAAATATTACAAAATAATTTGTATTTAAGAGATGATGAATTCGTATGAAAATTGATTGATCTTGGTGAGTAGAAAGAGTTGATTAGAAAATCACACTATAACACTTTTGGTTTTAGATATCGATTGACATTTTATAAACGATGAGTACATAAAAACTTTATGATAGTTGTTTTGGAAAACGCACTTTTTTTACGAAAAGTTTTGAATTTTAACATAAATTATTACGACATTTATAAAATTATCTCTAAATCAAACTACGAATGAATTCAAGGAGACCCAAATTAGGTAACTCGCACACTTCCTTTAGATTTGAATTCATACTTTCAGATATATTCGTGATAAAAGAAAAAAATCATCTTCTTGCACAAAATGCCTAGACCATTTAGGTTTGGCTACATCTTCTAATTTAAGCCTAAATGAAGGGATAGCATCATCCAACTCCTTCGTGCATATTCAAAATTGATGACCGATAGGCACTAGCAAATATTTGGTCTTCTTATGCTCATTTTTTATATTTCCTACTATGACTATACTTCTCTCTTTTGTAGGTAGGGCAATGAAGATTCTCAATTTCTAGGACTTTAGGATCTTCTCTTTTATTACGCACTCAATCTAGTATCAACTCAACTCATTGGTATTTGACAGCATATCCTTGGATCCAATTGGTTGGGTGATTTCTCTAGTTGATTCTTTTGATAGTTGGTTAAGATCCTTGCTTGTGGGTCTAGATGCAATGGATCCTTCGACCATCGTTGAGGCTAACTGGAGGACCCCTCCTTTAGAAATTTTTAAGGTAAATTTTGATGCAACTAATGGAAGCAAAGAGGTGGACCTTGGAGTTGTTCGTGATTCCAATGACGAGAACTGA ATGGAGGCAATGAAGAAGGTTTTAATAACGGGAGTGGGTAAAGGGTTGGGAAGAGCATTGGCAATGGAGTTGGCAAAGTTTGGTCACATTATTATTGGTTGCTCTCGTACCCAAAACAACCTCCATTTCCTTAAACAACACCTCCACAACATCTCTCCACACAACCATTTGCTCCTCAACATTGATGTGAGTTCCAACGACAGTGTTAAGGAGATGGCAGGAATTGTTGTGGACAAAATAGGAGTTCCTGATATAATTGTAAACAATGCGGGTGTGTTTAATGGGCAACGCAAGATTTGGGAGATTACTAAACAAGAGTTTGACAATGTGATTGACATAAATATAAAGGGCACAGCAAATGTGTTACGCCACTTTATTCCACTCATGATTCCTAAAAACCAAGGCATCATTGTTAATGTGTCTTCTATCTTGGCAACAATGGGAGTTGCTACCGCATCGGCATATTGTAGCTCAAAATGGGCGATCGAAGGCTTAAGTAAATCAGTAGCCAAAGAGATACCAAATGGAATGACGATTGTGGCCTTGGATCCTGGCATTGTAAATACAGATTTGGTATTTACTTTATTGGGTAATATTGCATCTCAATATCAAACTCCTTCCATATGCATATCCTTGGATCCAATTGGTTGGGTGATTTCTCTAGTTGATTCTTTTGATAGTTGGTTAAGATCCTTGCTTGTGGGTCTAGATGCAATGGATCCTTCGACCATCGTTGAGGCTAACTGGAGGACCCCTCCTTTAGAAATTTTTAAGGTAAATTTTGATGCAACTAATGGAAGCAAAGAGGTGGACCTTGGAGTTGTTCGTGATTCCAATGACGAGAACTGA ATGGAGGCAATGAAGAAGGTTTTAATAACGGGAGTGGGTAAAGGGTTGGGAAGAGCATTGGCAATGGAGTTGGCAAAGTTTGGTCACATTATTATTGGTTGCTCTCGTACCCAAAACAACCTCCATTTCCTTAAACAACACCTCCACAACATCTCTCCACACAACCATTTGCTCCTCAACATTGATGTGAGTTCCAACGACAGTGTTAAGGAGATGGCAGGAATTGTTGTGGACAAAATAGGAGTTCCTGATATAATTGTAAACAATGCGGGTGTGTTTAATGGGCAACGCAAGATTTGGGAGATTACTAAACAAGAGTTTGACAATGTGATTGACATAAATATAAAGGGCACAGCAAATGTGTTACGCCACTTTATTCCACTCATGATTCCTAAAAACCAAGGCATCATTGTTAATGTGTCTTCTATCTTGGCAACAATGGGAGTTGCTACCGCATCGGCATATTGTAGCTCAAAATGGGCGATCGAAGGCTTAAGTAAATCAGTAGCCAAAGAGATACCAAATGGAATGACGATTGTGGCCTTGGATCCTGGCATTGTAAATACAGATTTGGTATTTACTTTATTGGGTAATATTGCATCTCAATATCAAACTCCTTCCATATGCATATCCTTGGATCCAATTGGTTGGGTGATTTCTCTAGTTGATTCTTTTGATAGTTGGTTAAGATCCTTGCTTGTGGGTCTAGATGCAATGGATCCTTCGACCATCGTTGAGGCTAACTGGAGGACCCCTCCTTTAGAAATTTTTAAGGTAAATTTTGATGCAACTAATGGAAGCAAAGAGGTGGACCTTGGAGTTGTTCGTGATTCCAATGACGAGAACTGA MEAMKKVLITGVGKGLGRALAMELAKFGHIIIGCSRTQNNLHFLKQHLHNISPHNHLLLNIDVSSNDSVKEMAGIVVDKIGVPDIIVNNAGVFNGQRKIWEITKQEFDNVIDINIKGTANVLRHFIPLMIPKNQGIIVNVSSILATMGVATASAYCSSKWAIEGLSKSVAKEIPNGMTIVALDPGIVNTDLVFTLLGNIASQYQTPSICISLDPIGWVISLVDSFDSWLRSLLVGLDAMDPSTIVEANWRTPPLEIFKVNFDATNGSKEVDLGVVRDSNDEN Homology
BLAST of Clc11G00400 vs. NCBI nr
Match: XP_038893066.1 (NADPH-dependent pterin aldehyde reductase-like [Benincasa hispida]) HSP 1 Score: 335.9 bits (860), Expect = 3.4e-88 Identity = 168/205 (81.95%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of Clc11G00400 vs. NCBI nr
Match: XP_008465557.1 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis melo]) HSP 1 Score: 317.8 bits (813), Expect = 9.6e-83 Identity = 160/203 (78.82%), Postives = 182/203 (89.66%), Query Frame = 0
BLAST of Clc11G00400 vs. NCBI nr
Match: XP_011656134.1 (NADPH-dependent pterin aldehyde reductase [Cucumis sativus]) HSP 1 Score: 317.4 bits (812), Expect = 1.3e-82 Identity = 160/203 (78.82%), Postives = 180/203 (88.67%), Query Frame = 0
BLAST of Clc11G00400 vs. NCBI nr
Match: XP_038891838.1 (NADPH-dependent pterin aldehyde reductase-like [Benincasa hispida]) HSP 1 Score: 283.5 bits (724), Expect = 2.0e-72 Identity = 138/202 (68.32%), Postives = 167/202 (82.67%), Query Frame = 0
BLAST of Clc11G00400 vs. NCBI nr
Match: XP_004142297.1 (NADPH-dependent pterin aldehyde reductase [Cucumis sativus] >KGN49693.1 hypothetical protein Csa_018485 [Cucumis sativus]) HSP 1 Score: 281.6 bits (719), Expect = 7.6e-72 Identity = 140/203 (68.97%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.0e-63 Identity = 124/204 (60.78%), Postives = 154/204 (75.49%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy Swiss-Prot
Match: Q5HPW0 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=fabG PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21 Identity = 60/200 (30.00%), Postives = 116/200 (58.00%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy Swiss-Prot
Match: Q8CPI3 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=fabG PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21 Identity = 60/200 (30.00%), Postives = 116/200 (58.00%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy Swiss-Prot
Match: Q5HGK2 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain COL) OX=93062 GN=fabG PE=3 SV=2) HSP 1 Score: 103.2 bits (256), Expect = 4.9e-21 Identity = 61/207 (29.47%), Postives = 117/207 (56.52%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy Swiss-Prot
Match: P0A0H9 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=fabG PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.9e-21 Identity = 61/207 (29.47%), Postives = 117/207 (56.52%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy TrEMBL
Match: A0A1S3CP56 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503187 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 4.6e-83 Identity = 160/203 (78.82%), Postives = 182/203 (89.66%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy TrEMBL
Match: A0A0A0KPL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G054570 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 6.1e-83 Identity = 160/203 (78.82%), Postives = 180/203 (88.67%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy TrEMBL
Match: A0A0A0KJF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G070680 PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 3.7e-72 Identity = 140/203 (68.97%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy TrEMBL
Match: A0A6J1DQ73 (NADPH-dependent pterin aldehyde reductase-like OS=Momordica charantia OX=3673 GN=LOC111023209 PE=3 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 2.9e-69 Identity = 136/205 (66.34%), Postives = 165/205 (80.49%), Query Frame = 0
BLAST of Clc11G00400 vs. ExPASy TrEMBL
Match: A0A6J1EML0 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111434767 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 2.3e-66 Identity = 130/203 (64.04%), Postives = 161/203 (79.31%), Query Frame = 0
BLAST of Clc11G00400 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 245.0 bits (624), Expect = 7.4e-65 Identity = 124/204 (60.78%), Postives = 154/204 (75.49%), Query Frame = 0
BLAST of Clc11G00400 vs. TAIR 10
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15 Identity = 57/198 (28.79%), Postives = 106/198 (53.54%), Query Frame = 0
BLAST of Clc11G00400 vs. TAIR 10
Match: AT3G55290.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15 Identity = 57/198 (28.79%), Postives = 106/198 (53.54%), Query Frame = 0
BLAST of Clc11G00400 vs. TAIR 10
Match: AT3G55310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14 Identity = 54/198 (27.27%), Postives = 106/198 (53.54%), Query Frame = 0
BLAST of Clc11G00400 vs. TAIR 10
Match: AT3G47360.1 (hydroxysteroid dehydrogenase 3 ) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-14 Identity = 58/191 (30.37%), Postives = 101/191 (52.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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