
Clc10G22040 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAAACGAAAAATCGATTCGATCTGATGACAAATCCCGAAGACTCTGCACCGACGCAACAAAACGGGGCGCCGCCGTCTGCCCCTCCAGCAGCGGACTTGGAAAGACAAACCCCACCGGCGACCAGTTTCGGGGTTTCGGAGATCGTGAGCCGGTGGCGGAGAGAGGATCTATTAAAACGCCGCGTTTTGGCTCTGAGAGGATTTGGGTTTATCTTTTCTTTGCTTGCTTTCATTATTATGGCTAGCAATAAACATGGCGATTGGAAAGATTTCGACAAGTACGAAGAATTCAGGTAACCCAGTTTCATTTCTTCTTTAAACTATAAATTTCGTTATATTCGAGACAGGGATTAGAATTTGGCATTGAAATAGGTACGTATTGGCAATAGCAATTCTCTCCACTTTGTATACGGGCGCCCAAGTTTTGAGACAAGTTCATGAACTTTCAACTGGCAAATCTGTGATTCTACCCCAAAAAGCTGCCTTTATCGACTTTATTGGAGATCAGGTTAGTGTGTTTCTTCTAAGTTCTAATCAAGAGTGGACCTACCAAACATAATTTTGGGTAAACTATAAATTTAATCCTTATGAATTTACACAATTCTTTAATTTCCTCCTCATATGATTTTGAAACTAGAAAGTTAGTCTGGATAGTTTGGACTTTTGCTTTCATACATATAATTTAAGATCTAATTTCATAGGCATCAAAGTCAAATCCAAGCTCAAGCTATAGGGAATAAATTAGAACTTAATAAAGAACGTGACCAAAATTAAATAGATCAAATTAAAGCTTTTGAAAATCATAAGAATTAAATTAAAATTTTATCAAAGAATTTAGGATACATTACAAACATAAGCTCTTCTCGACTTTTCAAGTTTATGCCTAATAGGCGGCTAAAATTTAAAAAGTTTATAATAGATCTCTAGATGTTAAACCATAATATTAAATATTATTGCTGTATTTAGTGGTTAATTATGTACGTTTAATTCCTTTCTTTTTGTTGTTATGATTGATCTTAGACTTCTTGTTATTAATTTGAGTGCGCCCTCGTCTTCTTCATTTTGAATGAAATAACATGCCAAGATTAGTTCCCTTTTTCTTTCTAGCTTTCAGTTTTATACTAAAATTTCAATCTTGAGTCTAATAAATTTGTACACTTTCAAGTTTTTTAAACTATTAATTTTATACAGATTCTAGAATTTAATTAAAAATTCAACTTTTGCAAAAAAAAAAAATATATATATATATATTAATTAATTGGACCTAAAATTTTAAAGATTTGAATATAAAAGTAGAGGGCAAAAAATTGTGCAAAATTATATGAAGGTTGTTAATGAGATTGGAAAATAAAATAAAATAAATGGATGTGCAGAGTGTGGCGTATCTGCTAATGTCGGCGGCATCCACAGCAGTTCCGATGACAAACAGAATGAGAGAAGGCTCAGATTCTTCTTTTACGGATTCATTGGCAGCTTCTGTTACAATGTCCTTTTTCGCCTTCTTGTCTTTGGCTTTATCGGCCGCCATTACAGGATACAAACTCTCTACTCACTCTTATATTTAAATTCTAATTTTTCCACAATTAACCTTTCTTTTTAACTCTCTTTCTCTCTCTCTCTTACCCACCATTTTTGTTTTTTTTTTCCTTCCCTCTTAATTTTTTTTTTTTAATTATATGTAACGAAACACTCTCATCATTTCTTCAAATCTTCATTCAATTTCATTATTGTAATGTGTAAAATTCTCAGTCACTTAAACCGCTAATAATTGATACAACAACCCACATATCTCCTAAACTGATCTAGTCTAATAACCAATTAACAAATTCTCTTGGAAGTTAAATCTATTCTATTCTAGTAATCCCCTACCAATTATACAAAACTACAAACAATAAAGGAAAAAAAAAGAAGAAGAAAGAAACTCTAAGATAGAAATGAGTTGATGAAGTATATGTCATCTCTGGCTTCTTCCTTGGCTGCGGATCCAAATCCTGAAACTTGGAAACTTGGAGGCACTCCTTGTGATGTTTGAAATGGGAATGATGATGCTTCTGCTCCAATTTCTGACATGGCTAAATTTGCCGGCTGGAACGTGGCCGGAAAATTTGCCGGGAAAGAATGACTACCGATGGCAGACGGCCTCACCGGCATTGGAATGTTGGTCGGTGTAGGTCGGTTGATGGCATTATAGCCACTGCCACCGCTGCCACGGGCTGCTGGAACTTCATGGTTGTGTTTGCCTTCGTAGGTAGTGATCACGGCCCTCATGTCGTTAGCCGCTCTCTCGATGTGTTTCCTCACCGGGCAGCCTAAAGATGTGCATTTGTAGTAGCTCCTATATAGTTAAACACAAGGAAAATAAATTACCAGTCCCAAATATAATATAAGTTAGATACCACATTATCACGTGCAAGTAAGTGTGAGGGATTTGAACTTCCAACCTCAAAAAGAAAAGTCAATATCTTAACTATTGAGTTAAACTTTATTAAATCAACATTGAACCCACAAAATGTAACTACTTCAAACACATGAACTCATACTCTAATATTATGTTAAATCAACATTATATTGGACTCCAAGAATTAAATCACTATCATAACAGACTCAAAAATTAAAGTTCTTTTTTTCTAGTCCAACAATTGGAGTTAACTTCATACCCTTGACCTCTAAGTCAATAACATAGATATCTCCTAACAAATTGAGATGTGCAATGACTCACAAGCTTATGTCATCAACTCTATCTCATTATTATTATTTTTCAGGTCAAGTCATCAAATTGGTACAATAATTAAATAGATTTAGTTTTATTTAATCCTCAACTTTGGTTACTTCTCTTATA AAAAAAAAAAAAAAAAAAAAAAACGAAAAATCGATTCGATCTGATGACAAATCCCGAAGACTCTGCACCGACGCAACAAAACGGGGCGCCGCCGTCTGCCCCTCCAGCAGCGGACTTGGAAAGACAAACCCCACCGGCGACCAGTTTCGGGGTTTCGGAGATCGTGAGCCGGTGGCGGAGAGAGGATCTATTAAAACGCCGCGTTTTGGCTCTGAGAGGATTTGGGTTTATCTTTTCTTTGCTTGCTTTCATTATTATGGCTAGCAATAAACATGGCGATTGGAAAGATTTCGACAAGTACGAAGAATTCAGGTACGTATTGGCAATAGCAATTCTCTCCACTTTGTATACGGGCGCCCAAGTTTTGAGACAAGTTCATGAACTTTCAACTGGCAAATCTGTGATTCTACCCCAAAAAGCTGCCTTTATCGACTTTATTGGAGATCAGAGTGTGGCGTATCTGCTAATGTCGGCGGCATCCACAGCAGTTCCGATGACAAACAGAATGAGAGAAGGCTCAGATTCTTCTTTTACGGATTCATTGGCAGCTTCTGTTACAATGTCCTTTTTCGCCTTCTTGTCTTTGGCTTTATCGGCCGCCATTACAGGATACAAACTCTCTACTCACTCTTATATTTAAATTCTAATTTTTCCACAATTAACCTTTCTTTTTAACTCTCTTTCTCTCTCTCTCTTACCCACCATTTTTGTTTTTTTTTTCCTTCCCTCTTAATTTTTTTTTTTTAATTATATGTAACGAAACACTCTCATCATTTCTTCAAATCTTCATTCAATTTCATTATTGTAATGTGTAAAATTCTCAGTCACTTAAACCGCTAATAATTGATACAACAACCCACATATCTCCTAAACTGATCTAGTCTAATAACCAATTAACAAATTCTCTTGGAAGTTAAATCTATTCTATTCTAGTAATCCCCTACCAATTATACAAAACTACAAACAATAAAGGAAAAAAAAAGAAGAAGAAAGAAACTCTAAGATAGAAATGAGTTGATGAAGTATATGTCATCTCTGGCTTCTTCCTTGGCTGCGGATCCAAATCCTGAAACTTGGAAACTTGGAGGCACTCCTTGTGATGTTTGAAATGGGAATGATGATGCTTCTGCTCCAATTTCTGACATGGCTAAATTTGCCGGCTGGAACGTGGCCGGAAAATTTGCCGGGAAAGAATGACTACCGATGGCAGACGGCCTCACCGGCATTGGAATGTTGGTCGGTGTAGGTCGGTTGATGGCATTATAGCCACTGCCACCGCTGCCACGGGCTGCTGGAACTTCATGGTTGTGTTTGCCTTCGTAGGTAGTGATCACGGCCCTCATGTCGTTAGCCGCTCTCTCGATGTGTTTCCTCACCGGGCAGCCTAAAGATGTGCATTTGTAGTAGCTCCTATATAGTTAAACACAAGGAAAATAAATTACCAGTCCCAAATATAATATAAGTTAGATACCACATTATCACGTGCAAGTAAGTGTGAGGGATTTGAACTTCCAACCTCAAAAAGAAAAGTCAATATCTTAACTATTGAGTTAAACTTTATTAAATCAACATTGAACCCACAAAATGTAACTACTTCAAACACATGAACTCATACTCTAATATTATGTTAAATCAACATTATATTGGACTCCAAGAATTAAATCACTATCATAACAGACTCAAAAATTAAAGTTCTTTTTTTCTAGTCCAACAATTGGAGTTAACTTCATACCCTTGACCTCTAAGTCAATAACATAGATATCTCCTAACAAATTGAGATGTGCAATGACTCACAAGCTTATGTCATCAACTCTATCTCATTATTATTATTTTTCAGGTCAAGTCATCAAATTGGTACAATAATTAAATAGATTTAGTTTTATTTAATCCTCAACTTTGGTTACTTCTCTTATA ATGACAAATCCCGAAGACTCTGCACCGACGCAACAAAACGGGGCGCCGCCGTCTGCCCCTCCAGCAGCGGACTTGGAAAGACAAACCCCACCGGCGACCAGTTTCGGGGTTTCGGAGATCGTGAGCCGGTGGCGGAGAGAGGATCTATTAAAACGCCGCGTTTTGGCTCTGAGAGGATTTGGGTTTATCTTTTCTTTGCTTGCTTTCATTATTATGGCTAGCAATAAACATGGCGATTGGAAAGATTTCGACAAGTACGAAGAATTCAGGTACGTATTGGCAATAGCAATTCTCTCCACTTTGTATACGGGCGCCCAAGTTTTGAGACAAGTTCATGAACTTTCAACTGGCAAATCTGTGATTCTACCCCAAAAAGCTGCCTTTATCGACTTTATTGGAGATCAGAGTGTGGCGTATCTGCTAATGTCGGCGGCATCCACAGCAGTTCCGATGACAAACAGAATGAGAGAAGGCTCAGATTCTTCTTTTACGGATTCATTGGCAGCTTCTGTTACAATGTCCTTTTTCGCCTTCTTGTCTTTGGCTTTATCGGCCGCCATTACAGGATACAAACTCTCTACTCACTCTTATATTTAA MTNPEDSAPTQQNGAPPSAPPAADLERQTPPATSFGVSEIVSRWRREDLLKRRVLALRGFGFIFSLLAFIIMASNKHGDWKDFDKYEEFRYVLAIAILSTLYTGAQVLRQVHELSTGKSVILPQKAAFIDFIGDQSVAYLLMSAASTAVPMTNRMREGSDSSFTDSLAASVTMSFFAFLSLALSAAITGYKLSTHSYI Homology
BLAST of Clc10G22040 vs. NCBI nr
Match: XP_004137690.1 (CASP-like protein 4B1 [Cucumis sativus] >KGN58715.1 hypothetical protein Csa_001590 [Cucumis sativus]) HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88 Identity = 174/198 (87.88%), Postives = 187/198 (94.44%), Query Frame = 0
BLAST of Clc10G22040 vs. NCBI nr
Match: XP_038903895.1 (CASP-like protein 4B1 [Benincasa hispida]) HSP 1 Score: 334.7 bits (857), Expect = 5.3e-88 Identity = 178/202 (88.12%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of Clc10G22040 vs. NCBI nr
Match: KAA0044207.1 (CASP-like protein 4B1 [Cucumis melo var. makuwa]) HSP 1 Score: 324.3 bits (830), Expect = 7.2e-85 Identity = 171/198 (86.36%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of Clc10G22040 vs. NCBI nr
Match: XP_008442357.1 (PREDICTED: CASP-like protein 4B1 [Cucumis melo]) HSP 1 Score: 323.9 bits (829), Expect = 9.4e-85 Identity = 171/198 (86.36%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of Clc10G22040 vs. NCBI nr
Match: XP_022157298.1 (CASP-like protein 4B1 [Momordica charantia]) HSP 1 Score: 288.1 bits (736), Expect = 5.7e-74 Identity = 153/200 (76.50%), Postives = 171/200 (85.50%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy Swiss-Prot
Match: D7LBN4 (CASP-like protein 4B1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_321547 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.2e-43 Identity = 96/198 (48.48%), Postives = 133/198 (67.17%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy Swiss-Prot
Match: Q8LE26 (CASP-like protein 4B1 OS=Arabidopsis thaliana OX=3702 GN=At2g38480 PE=2 SV=2) HSP 1 Score: 173.7 bits (439), Expect = 2.1e-42 Identity = 94/198 (47.47%), Postives = 133/198 (67.17%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy Swiss-Prot
Match: Q5W6M3 (CASP-like protein 4B4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0344400 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.6e-42 Identity = 98/200 (49.00%), Postives = 133/200 (66.50%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy Swiss-Prot
Match: C5WNF5 (CASP-like protein 4B1 OS=Sorghum bicolor OX=4558 GN=Sb01g038100 PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 8.7e-41 Identity = 90/193 (46.63%), Postives = 127/193 (65.80%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy Swiss-Prot
Match: F2D276 (CASP-like protein 4B2 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.2e-39 Identity = 81/162 (50.00%), Postives = 112/162 (69.14%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy TrEMBL
Match: A0A0A0L9S4 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G730790 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 6.8e-89 Identity = 174/198 (87.88%), Postives = 187/198 (94.44%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy TrEMBL
Match: A0A5A7TQT0 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005660 PE=3 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85 Identity = 171/198 (86.36%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy TrEMBL
Match: A0A1S3B5I1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486250 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.6e-85 Identity = 171/198 (86.36%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy TrEMBL
Match: A0A6J1DT05 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111024030 PE=3 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.8e-74 Identity = 153/200 (76.50%), Postives = 171/200 (85.50%), Query Frame = 0
BLAST of Clc10G22040 vs. ExPASy TrEMBL
Match: A0A6J1I265 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470217 PE=3 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.8e-73 Identity = 152/214 (71.03%), Postives = 173/214 (80.84%), Query Frame = 0
BLAST of Clc10G22040 vs. TAIR 10
Match: AT2G38480.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43 Identity = 94/198 (47.47%), Postives = 133/198 (67.17%), Query Frame = 0
BLAST of Clc10G22040 vs. TAIR 10
Match: AT2G36330.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19 Identity = 58/162 (35.80%), Postives = 94/162 (58.02%), Query Frame = 0
BLAST of Clc10G22040 vs. TAIR 10
Match: AT5G62820.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13 Identity = 51/159 (32.08%), Postives = 85/159 (53.46%), Query Frame = 0
BLAST of Clc10G22040 vs. TAIR 10
Match: AT4G11655.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12 Identity = 53/180 (29.44%), Postives = 90/180 (50.00%), Query Frame = 0
BLAST of Clc10G22040 vs. TAIR 10
Match: AT5G40300.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 68.6 bits (166), Expect = 6.6e-12 Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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