Clc10G21810 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTATTGAATAAAAAAAAACTATTTTTAGCCATAAAAAGTAGCATTATTATATTCGATTTCGTGCCCTAACTTTTTTTTCCCTTCACATAGTTTATTCTTCGAAAGTCTAATGAAACAAAAAATTACGACTGATTTAAAATCTTTTTTAGATCATCACATGGACAACCTGTATTAAAACAACAAGCAATTCTTTTGGAGGTTTCTCTCTTTCCTTTATAAGAACGAAACAAGTGGTCAGGCTTCACAGCTCCAACCTGTTCTTCCACGGCCGCCATTAGCGTCGTAACTGTAAGCTTCATCAATTCTTCATCCATGGTGTTATATTCACCCACGAGCTGTAACCAATTAGCGAAGCATCAAGCATAAAATCCCCAAGTGGCGTTTGAGCTTCAGTAACAAGTAATAACAACACAACGCCAGAGGAAGGTGGCCGAGGAAAGAGCGACGATTAAGGGTTTCGAGACCGGAAAAATGGAGAATCAGGAAGCTCGCAGGTCGAATACGGAACAGAGATCGACGAAGAAATCGATTCCTCCGTACATGAAGGCGATCTCTGGTTCTCTCGGAGGGGTAATGGAGGCCTGTTGTCTACAGCCGATTGACGTTATCAAGACTAGGTTACAGCTCGATCGGAGCGGGGCGTACAAGGGGATTTTTCACTGTGGAGCTACGGTAACGCGAACGGAAGGAGTTCGAGCTCTTTGGAAGGGATTGACTCCGTTCGCTACGCATCTGACCTTGAAATATGCGCTTCGCATGGGGTCCAATGCGGTGCTTCAGACCGCCTTTAAGGATTCCGAGACTGGAAAACTCAGCAATCATGCTCGGCTGATTTCTGGATTCGGTGCCGGAGTATTGGAGGCTCTTGTCATTGTTACTCCATTTGAGGTCGGTTTGCATCTCTCGCTCTCTCTTTCTCATTGTCAACTAATTTGCTACAATTCAGCTTTCAGTTTCATGTTCGACAGATTTGAATATGGCATCATGATTATATACCCTTTTTTATATTATCGAATTAGAGATTACTCTCCTGAGGAAGGACGCCTAACCAGTTAATTATCCACTGATGGGTGATTATGAAATTAATTCGTAGAATTTGAAAATCATTAGCTCTGAACGTTGGTCTCAAGGTTGAGTTGAGGGCGCTGGTTCTCCTCTTTAACAATGGGAAACCGTGCGTGGACGATAGTTAGCGCTGACAGGACTATATAATATAATATAAACACATAAACACCTTTTGCTGATTCTTTTAACGGCGATGTACTTAAATCAATTTTTAATGCTCATCGATGGCTTTGTTTTCAACGGAAAATATGGATTTTAGTTTTATAATGGCAGAATGAGATTCCAATAAAGCCCTGGCATTGCCTTTTCCGTGTGCAGGATATATATATAATATATTACTCGTTGGTTGGGACTGGTGGTGAACAGTGTTTTGGCCCTTTTTAACGTTAGGAATAGGAATTAATTAGTCTTCATATGGGTCAGAGCCCACTCTTACCCCTCTGCACTTTTAGCATTTTAGTATTTCCTATATAATGAATCAATGATGATTTGGTATTTGTCCTTCAAAAGTATCATGTTCCTAAGTTCATAACATTAGAAAAATATTCATAGTGATTCGGACAGTAGAAACTCTGCCTGTTTCATTTACTCTACCAAACTCCATTTGTAGTAGGTTGCTTCTTTTTCATGAGATCAACATTTGAGAGTTGTTGTTACTCAAGCATGTTTTAGCTTTATAGAAAATACCAGTTTCTTTACCACTGTCAACGGTTTGCCTTGGTTGCTGACTTTCTTCATTTGGGTTTATTTAGCAGCTAAATTAGGGTAGGGGAGAATGCTAAACAAAAATCCATTAATGTTGTTGGGAGTGCAACCAAATCCCACATTTCAAATTTAAAAGACGTGATTTGATTGGTATGATCTATGGGTTAATCTTGGATGCATTATAAAGTATAAAAATTCTGATAAGGACCAAAGTTTCAAATTTGATAGGGGAAGGGACGATCTTAGTAATTTGTAGATATATAAGTAAAATAACAATTATTTATATTAGTATGAGACTTTGGGGTGCAACTGAAATTTGAAGTAAAACCACGTGGACATATGTCTAAAGGGGATAACATTATATTATTAGGTTATACCATTGCTTAATGCGGTTGTTGACCCAGGCTACGGTGGTCGGTTGGACGGTGCACACAATCAATTTGGTTAACTATGAAACTCAGTTTTCCGTTCTCTATATCAAATTAATTTAATGCCTAGTTCCTTAATACCGCCATTCCTTGTCTTCCTATCTACTTACTATCCTTCTTGTAAGTCAAAATTCATCTTTTCTACTTCTTTTGCATCAGTTGGTGCATTCCCTTTATGTAAAAGGAAGTAACCTATTAAGGCAAAAGTTTGCGCGAAAGTAGAGAGTTATGCAATTATTTTATATCTATAGTCAATTTACAGAAGGTCTCAAGATTATGATGTTGCTAATAAAAAGATGTCGGTGAGTTAGATTCAAGTTCAAAGGTTTGAGTCAGAAGAAAACTTTGGCTTAGAGAGTGAAATATTTATTATCTTGCTCTTTGTTGATACACTGCAACTGTGCTGCATACTATAGATAAATTTGACCGTCTTCCATCTCCAATTTTTTACTTGTCTTTTGGTTTTCATGGTCAATTAAAGAGGTTGTTCTGCTCCATCTAAACATTATGTAATAAGGTGTAAGCAGTTCTACCTGAGTTGATTTGTTTAGTAAATTTGTTCCGTTTCAACTTGAACCCTATTCATGTATGTCCAATAGTAAGAAGTGTGGGATGTCTAACATATTGGTGTGAATGTTGCTTGTGTAGGTGGTGAAAATTAGATTGCAGCAGCAGAAAGGCCTGAGTCCTGAGCTCCTCAAGTATAAGGGTCCAGTGCACTGTGCTCGAATGATTATTCGCGAAGAAGGCCTCCTAGGACTTTGGGCAGGTGCTGCCCCAACTGTTATGCGCAATGGTACAAACCAGGCTGCCATGTTTACTGCCAAGAATGCTTTTGATATTGTTCTTTGGAACAGACACGAAGGGGATGGAAAAGTCCTCCAGCCATGGCAGTCGATGGTATCGGGATTCCTAGCAGGCACGGCAGGCCCTTTATGCACTGGTCCTTTTGATGTTGTGAAAACTAGGCTAATGGCCCAAAGCCGAGGCGCAGGTGAACTCAAGTACAATGGCATGTTCCATGCTATCAAAACTATATACGCAGAGGAGGGACTTCTTGCTTTATGGAAAGGGCTGCTGCCCCGGCTCATGAGGATTCCACCAGGGCAGGCCATTGTGTGGGCTGTGGCCGATCAAATTATCGGCTTGTATGAGAGGAGACATCTTTATGATGCTCCCATATGAATACTAGGCATATTTTTGGCACTGGTTTACTATTAAGTCCACTCCAGACGGGACCTTACCCGAACAAGATCTGTTCTATAGACTGACCAATTAGCGGTCTTTTATTGCATGCCTCCATTTTCCTGTGTCTGATTCAGCCACCATCCAAATAACCAGGAAGATTTGGCGCCTCATATCTTCAAATAGATCAAATTGGTAGACATGGGAAAGTATTTTAGACTAGTAGTCCCTTTGAAATTTAGTGTCCGAGTAGTGCTTATTCTTTAGTCACAATTCTTGGATTCCTTGGGAGTACCAAGACTTATTGTTGGTAGATGATGTTTTGTACTCAATAACATAATTTCTTGTAGGTCTTGTATCAGGTAAACATTGTTATCAAAAGGTATTGGATTTTAAGAAAATGAACAATAATTGAATTGGTTGAAAGATGCTGCCTCTGTATATACATAGGCTATGATGAGTTTGGCTAGTAACTCAAAATTTTCAGTTTACCAATTGTTCAATTTTTCTTATGCAGGGCTCTGATTTTGCAGCTGATGAATGGATTTTATGCGTATATCTCACTAGTCAAAAGCTGAAACTCTCTCCTTGTGGACCATATATTTAGTTTAGTATGCATTTCTATCAAATGTATATATGTATATGGAATCTATCTATTATAGCAACTAGGAAACTTCCTAAGGCTTGATTAGGACCATTGTTGGCCTCAAAGAATAGTTATCTTTCTTTTACTTTACTTGGTCTCGTGACATTTCTTGTATGCTATATTATAAGGGATGCATGGTTAGCCTAAAGGAATCATTTTGTTGCAGAAGTAATGCTTCCAGCATCTTTCAGATGGCAACATATTGCTTTACTC CTTTTATTGAATAAAAAAAAACTATTTTTAGCCATAAAAAGTAGCATTATTATATTCGATTTCGTGCCCTAACTTTTTTTTCCCTTCACATAGTTTATTCTTCGAAAGTCTAATGAAACAAAAAATTACGACTGATTTAAAATCTTTTTTAGATCATCACATGGACAACCTGTATTAAAACAACAAGCAATTCTTTTGGAGGTTTCTCTCTTTCCTTTATAAGAACGAAACAAGTGGTCAGGCTTCACAGCTCCAACCTGTTCTTCCACGGCCGCCATTAGCGTCGTAACTGTAAGCTTCATCAATTCTTCATCCATGGTGTTATATTCACCCACGAGCTGTAACCAATTAGCGAAGCATCAAGCATAAAATCCCCAAGTGGCGTTTGAGCTTCAGTAACAAGTAATAACAACACAACGCCAGAGGAAGGTGGCCGAGGAAAGAGCGACGATTAAGGGTTTCGAGACCGGAAAAATGGAGAATCAGGAAGCTCGCAGGTCGAATACGGAACAGAGATCGACGAAGAAATCGATTCCTCCGTACATGAAGGCGATCTCTGGTTCTCTCGGAGGGGTAATGGAGGCCTGTTGTCTACAGCCGATTGACGTTATCAAGACTAGGTTACAGCTCGATCGGAGCGGGGCGTACAAGGGGATTTTTCACTGTGGAGCTACGGTAACGCGAACGGAAGGAGTTCGAGCTCTTTGGAAGGGATTGACTCCGTTCGCTACGCATCTGACCTTGAAATATGCGCTTCGCATGGGGTCCAATGCGGTGCTTCAGACCGCCTTTAAGGATTCCGAGACTGGAAAACTCAGCAATCATGCTCGGCTGATTTCTGGATTCGGTGCCGGAGTATTGGAGGCTCTTGTCATTGTTACTCCATTTGAGGTGGTGAAAATTAGATTGCAGCAGCAGAAAGGCCTGAGTCCTGAGCTCCTCAAGTATAAGGGTCCAGTGCACTGTGCTCGAATGATTATTCGCGAAGAAGGCCTCCTAGGACTTTGGGCAGGTGCTGCCCCAACTGTTATGCGCAATGGTACAAACCAGGCTGCCATGTTTACTGCCAAGAATGCTTTTGATATTGTTCTTTGGAACAGACACGAAGGGGATGGAAAAGTCCTCCAGCCATGGCAGTCGATGGTATCGGGATTCCTAGCAGGCACGGCAGGCCCTTTATGCACTGGTCCTTTTGATGTTGTGAAAACTAGGCTAATGGCCCAAAGCCGAGGCGCAGGTGAACTCAAGTACAATGGCATGTTCCATGCTATCAAAACTATATACGCAGAGGAGGGACTTCTTGCTTTATGGAAAGGGCTGCTGCCCCGGCTCATGAGGATTCCACCAGGGCAGGCCATTGTGTGGGCTGTGGCCGATCAAATTATCGGCTTGTATGAGAGGAGACATCTTTATGATGCTCCCATATGAATACTAGGCATATTTTTGGCACTGGTTTACTATTAAGTCCACTCCAGACGGGACCTTACCCGAACAAGATCTGTTCTATAGACTGACCAATTAGCGGTCTTTTATTGCATGCCTCCATTTTCCTGTGTCTGATTCAGCCACCATCCAAATAACCAGGAAGATTTGGCGCCTCATATCTTCAAATAGATCAAATTGGTAGACATGGGAAAGTATTTTAGACTAGTAGTCCCTTTGAAATTTAGTGTCCGAGTAGTGCTTATTCTTTAGTCACAATTCTTGGATTCCTTGGGAGTACCAAGACTTATTGTTGGTAGATGATGTTTTGTACTCAATAACATAATTTCTTGTAGGTCTTGTATCAGGTAAACATTGTTATCAAAAGGTATTGGATTTTAAGAAAATGAACAATAATTGAATTGGTTGAAAGATGCTGCCTCTGTATATACATAGGCTATGATGAGTTTGGCTAGTAACTCAAAATTTTCAGTTTACCAATTGTTCAATTTTTCTTATGCAGGGCTCTGATTTTGCAGCTGATGAATGGATTTTATGCGTATATCTCACTAGTCAAAAGCTGAAACTCTCTCCTTGTGGACCATATATTTAGTTTAGTATGCATTTCTATCAAATGTATATATGTATATGGAATCTATCTATTATAGCAACTAGGAAACTTCCTAAGGCTTGATTAGGACCATTGTTGGCCTCAAAGAATAGTTATCTTTCTTTTACTTTACTTGGTCTCGTGACATTTCTTGTATGCTATATTATAAGGGATGCATGGTTAGCCTAAAGGAATCATTTTGTTGCAGAAGTAATGCTTCCAGCATCTTTCAGATGGCAACATATTGCTTTACTC ATGGAGAATCAGGAAGCTCGCAGGTCGAATACGGAACAGAGATCGACGAAGAAATCGATTCCTCCGTACATGAAGGCGATCTCTGGTTCTCTCGGAGGGGTAATGGAGGCCTGTTGTCTACAGCCGATTGACGTTATCAAGACTAGGTTACAGCTCGATCGGAGCGGGGCGTACAAGGGGATTTTTCACTGTGGAGCTACGGTAACGCGAACGGAAGGAGTTCGAGCTCTTTGGAAGGGATTGACTCCGTTCGCTACGCATCTGACCTTGAAATATGCGCTTCGCATGGGGTCCAATGCGGTGCTTCAGACCGCCTTTAAGGATTCCGAGACTGGAAAACTCAGCAATCATGCTCGGCTGATTTCTGGATTCGGTGCCGGAGTATTGGAGGCTCTTGTCATTGTTACTCCATTTGAGGTGGTGAAAATTAGATTGCAGCAGCAGAAAGGCCTGAGTCCTGAGCTCCTCAAGTATAAGGGTCCAGTGCACTGTGCTCGAATGATTATTCGCGAAGAAGGCCTCCTAGGACTTTGGGCAGGTGCTGCCCCAACTGTTATGCGCAATGGTACAAACCAGGCTGCCATGTTTACTGCCAAGAATGCTTTTGATATTGTTCTTTGGAACAGACACGAAGGGGATGGAAAAGTCCTCCAGCCATGGCAGTCGATGGTATCGGGATTCCTAGCAGGCACGGCAGGCCCTTTATGCACTGGTCCTTTTGATGTTGTGAAAACTAGGCTAATGGCCCAAAGCCGAGGCGCAGGTGAACTCAAGTACAATGGCATGTTCCATGCTATCAAAACTATATACGCAGAGGAGGGACTTCTTGCTTTATGGAAAGGGCTGCTGCCCCGGCTCATGAGGATTCCACCAGGGCAGGCCATTGTGTGGGCTGTGGCCGATCAAATTATCGGCTTGTATGAGAGGAGACATCTTTATGATGCTCCCATATGA MENQEARRSNTEQRSTKKSIPPYMKAISGSLGGVMEACCLQPIDVIKTRLQLDRSGAYKGIFHCGATVTRTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTAFKDSETGKLSNHARLISGFGAGVLEALVIVTPFEVVKIRLQQQKGLSPELLKYKGPVHCARMIIREEGLLGLWAGAAPTVMRNGTNQAAMFTAKNAFDIVLWNRHEGDGKVLQPWQSMVSGFLAGTAGPLCTGPFDVVKTRLMAQSRGAGELKYNGMFHAIKTIYAEEGLLALWKGLLPRLMRIPPGQAIVWAVADQIIGLYERRHLYDAPI Homology
BLAST of Clc10G21810 vs. NCBI nr
Match: XP_038906113.1 (mitochondrial succinate-fumarate transporter 1 [Benincasa hispida]) HSP 1 Score: 624.4 bits (1609), Expect = 5.4e-175 Identity = 305/317 (96.21%), Postives = 311/317 (98.11%), Query Frame = 0
BLAST of Clc10G21810 vs. NCBI nr
Match: XP_008442392.1 (PREDICTED: mitochondrial succinate-fumarate transporter 1 [Cucumis melo] >KAA0044187.1 mitochondrial succinate-fumarate transporter 1 [Cucumis melo var. makuwa] >TYK24945.1 mitochondrial succinate-fumarate transporter 1 [Cucumis melo var. makuwa]) HSP 1 Score: 621.7 bits (1602), Expect = 3.5e-174 Identity = 305/317 (96.21%), Postives = 307/317 (96.85%), Query Frame = 0
BLAST of Clc10G21810 vs. NCBI nr
Match: XP_004137702.1 (mitochondrial succinate-fumarate transporter 1 [Cucumis sativus] >KGN58738.1 hypothetical protein Csa_001973 [Cucumis sativus]) HSP 1 Score: 616.7 bits (1589), Expect = 1.1e-172 Identity = 302/317 (95.27%), Postives = 308/317 (97.16%), Query Frame = 0
BLAST of Clc10G21810 vs. NCBI nr
Match: XP_022145724.1 (mitochondrial succinate-fumarate transporter 1 [Momordica charantia]) HSP 1 Score: 615.5 bits (1586), Expect = 2.5e-172 Identity = 302/317 (95.27%), Postives = 309/317 (97.48%), Query Frame = 0
BLAST of Clc10G21810 vs. NCBI nr
Match: XP_022971508.1 (mitochondrial succinate-fumarate transporter 1-like [Cucurbita maxima]) HSP 1 Score: 615.1 bits (1585), Expect = 3.3e-172 Identity = 301/316 (95.25%), Postives = 309/316 (97.78%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy Swiss-Prot
Match: Q9M038 (Mitochondrial succinate-fumarate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=SFC1 PE=2 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 5.1e-152 Identity = 253/303 (83.50%), Postives = 279/303 (92.08%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy Swiss-Prot
Match: P33303 (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SFC1 PE=1 SV=2) HSP 1 Score: 183.7 bits (465), Expect = 3.2e-45 Identity = 112/309 (36.25%), Postives = 160/309 (51.78%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy Swiss-Prot
Match: P53007 (Tricarboxylate transport protein, mitochondrial OS=Homo sapiens OX=9606 GN=SLC25A1 PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.9e-38 Identity = 99/292 (33.90%), Postives = 151/292 (51.71%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy Swiss-Prot
Match: P79110 (Tricarboxylate transport protein, mitochondrial OS=Bos taurus OX=9913 GN=SLC25A1 PE=2 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.1e-37 Identity = 98/292 (33.56%), Postives = 149/292 (51.03%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy Swiss-Prot
Match: Q6PGY3 (Tricarboxylate transport protein A, mitochondrial OS=Danio rerio OX=7955 GN=slc25a1a PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-37 Identity = 99/296 (33.45%), Postives = 155/296 (52.36%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy TrEMBL
Match: A0A5A7TQQ9 (Mitochondrial succinate-fumarate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00610 PE=3 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 1.7e-174 Identity = 305/317 (96.21%), Postives = 307/317 (96.85%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy TrEMBL
Match: A0A1S3B5K9 (mitochondrial succinate-fumarate transporter 1 OS=Cucumis melo OX=3656 GN=LOC103486272 PE=3 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 1.7e-174 Identity = 305/317 (96.21%), Postives = 307/317 (96.85%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy TrEMBL
Match: A0A0A0LA59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731000 PE=3 SV=1) HSP 1 Score: 616.7 bits (1589), Expect = 5.4e-173 Identity = 302/317 (95.27%), Postives = 308/317 (97.16%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy TrEMBL
Match: A0A6J1CW40 (mitochondrial succinate-fumarate transporter 1 OS=Momordica charantia OX=3673 GN=LOC111015110 PE=3 SV=1) HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172 Identity = 302/317 (95.27%), Postives = 309/317 (97.48%), Query Frame = 0
BLAST of Clc10G21810 vs. ExPASy TrEMBL
Match: A0A6J1I723 (mitochondrial succinate-fumarate transporter 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470208 PE=3 SV=1) HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172 Identity = 301/316 (95.25%), Postives = 309/316 (97.78%), Query Frame = 0
BLAST of Clc10G21810 vs. TAIR 10
Match: AT5G01340.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 538.5 bits (1386), Expect = 3.6e-153 Identity = 253/303 (83.50%), Postives = 279/303 (92.08%), Query Frame = 0
BLAST of Clc10G21810 vs. TAIR 10
Match: AT4G03115.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 115.2 bits (287), Expect = 9.9e-26 Identity = 93/308 (30.19%), Postives = 141/308 (45.78%), Query Frame = 0
BLAST of Clc10G21810 vs. TAIR 10
Match: AT2G37890.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-25 Identity = 88/304 (28.95%), Postives = 136/304 (44.74%), Query Frame = 0
BLAST of Clc10G21810 vs. TAIR 10
Match: AT3G54110.1 (plant uncoupling mitochondrial protein 1 ) HSP 1 Score: 113.6 bits (283), Expect = 2.9e-25 Identity = 84/293 (28.67%), Postives = 134/293 (45.73%), Query Frame = 0
BLAST of Clc10G21810 vs. TAIR 10
Match: AT4G24570.1 (dicarboxylate carrier 2 ) HSP 1 Score: 113.2 bits (282), Expect = 3.8e-25 Identity = 88/310 (28.39%), Postives = 140/310 (45.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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