Clc10G21170 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G21170
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	17.3 kDa class I heat shock protein-like
Location	ClcChr10: 34464215 .. 34465425 (-)
RNA-Seq Expression	Clc10G21170
Synteny	Clc10G21170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGAGAGAAACTCTATGGCAGGCCCATCGGCCCATATGAACAAAAGGAGCTGAATCTGAACCAACATCTTCAGAATTCGTAAGAGATAACCCCCAAAAGCAAAGAGCTGAATCTGGGTAACGTGTTGGCTTCTTCATAATGAACAAGTGGTAAGAAAAATTCGTAATAATCCCATGAATGACCACTCGGATCAAAATCCTCTTCTCTGAATTCAATTCTTTTTGTGTCCAATCTTCTTCTGACGTGCTGCCATTCCCAATTCAAGTTGCTTTTCTTTCATCCGATAAAATCAAAAGACTCATACTGGATTCCATTCCCATTTCAAAAATCCATAGATTAGAGGTTAAACAGAGTTGTCGAAGTCACCTCAATTCAAAGAACAAATTCAGAAATTGATTTGATCGAAACCCACAAGAAAAAACTTCACAGAATAATCAATCGATTGCGACTTCCACCAACATTGGAATCGATTCCACTCCACTAAATTATATTAAACCTTCCATATGTGTGTATATATATATTCTCTTCTGTGTAATCCTCCTCCTATAAATTCAACTCCTAATCCTGCTTCACCAGCAAGCAACAAAATCACTACACGCAACACATTTTATTTGAAGAAAAAAAATGTCGCTCCGTTTCAGCAATTTCTTCCCTACCGATCGGAAGGAACGCTACTACGTTGAGGATCGGCCTGGATGCCAAAAGTGCCCTGAGGATCGAAAAGAACACTACCACGGAGAGGATCGACGCGTATTCGACAAATTCGTTGACGATCGAAAGGAACGGTACTACATAGAGGATCGGCATTCTTACGGACAATTCCATGAGAAAGACGTCATCGCAGCCGATCCATTCCGAAATTCGTCGGCCGTTAACGCTCAGATTGACTGGAAGGAGACCGCTGATGCACACGTGTTCAAGTTAGATCTTCCGGGAGTGAAAAAGCACGAAGTGAAACTGGAGATTGAAGAGAGTGGAGTTCTGTGTATCAGCACCGAAATTAGGGCTGAGAGAGAGGAGAGAACCGATATTTGGCGTCGTGTGGAACGAAGCAGTGGAAGGTTCTACCGGCGTATTGTCCTGCCGGAGGGTGCGGATGTGGATAAGGTGAGGGCAGAAATGAGTAACGGAGTACTGACGGTGACTGTGCCTAAATACCACTTCAAGAAACCCACGGCCAGAGTTGTCCAGATTTCTGGCCATTAA

mRNA sequence

ATGAGCCGAGAGAAACTCTATGGCAGGCCCATCGGCCCATATGAACAAAAGGAGCTGAATCTGAACCAACATCTTCAGAATTCCAATTTCTTCCCTACCGATCGGAAGGAACGCTACTACGTTGAGGATCGGCCTGGATGCCAAAAGTGCCCTGAGGATCGAAAAGAACACTACCACGGAGAGGATCGACGCGTATTCGACAAATTCGTTGACGATCGAAAGGAACGGTACTACATAGAGGATCGGCATTCTTACGGACAATTCCATGAGAAAGACGTCATCGCAGCCGATCCATTCCGAAATTCGTCGGCCGTTAACGCTCAGATTGACTGGAAGGAGACCGCTGATGCACACGTGTTCAAGTTAGATCTTCCGGGAGTGAAAAAGCACGAAGTGAAACTGGAGATTGAAGAGAGTGGAGTTCTGTGTATCAGCACCGAAATTAGGGCTGAGAGAGAGGAGAGAACCGATATTTGGCGTCGTGTGGAACGAAGCAGTGGAAGGTTCTACCGGCGTATTGTCCTGCCGGAGGGTGCGGATGTGGATAAGGTGAGGGCAGAAATGAGTAACGGAGTACTGACGGTGACTGTGCCTAAATACCACTTCAAGAAACCCACGGCCAGAGTTGTCCAGATTTCTGGCCATTAA

Coding sequence (CDS)

ATGAGCCGAGAGAAACTCTATGGCAGGCCCATCGGCCCATATGAACAAAAGGAGCTGAATCTGAACCAACATCTTCAGAATTCCAATTTCTTCCCTACCGATCGGAAGGAACGCTACTACGTTGAGGATCGGCCTGGATGCCAAAAGTGCCCTGAGGATCGAAAAGAACACTACCACGGAGAGGATCGACGCGTATTCGACAAATTCGTTGACGATCGAAAGGAACGGTACTACATAGAGGATCGGCATTCTTACGGACAATTCCATGAGAAAGACGTCATCGCAGCCGATCCATTCCGAAATTCGTCGGCCGTTAACGCTCAGATTGACTGGAAGGAGACCGCTGATGCACACGTGTTCAAGTTAGATCTTCCGGGAGTGAAAAAGCACGAAGTGAAACTGGAGATTGAAGAGAGTGGAGTTCTGTGTATCAGCACCGAAATTAGGGCTGAGAGAGAGGAGAGAACCGATATTTGGCGTCGTGTGGAACGAAGCAGTGGAAGGTTCTACCGGCGTATTGTCCTGCCGGAGGGTGCGGATGTGGATAAGGTGAGGGCAGAAATGAGTAACGGAGTACTGACGGTGACTGTGCCTAAATACCACTTCAAGAAACCCACGGCCAGAGTTGTCCAGATTTCTGGCCATTAA

Protein sequence

MSREKLYGRPIGPYEQKELNLNQHLQNSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARVVQISGH

Homology

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BLAST of Clc10G21170 vs. NCBI nr
Match: ADU55783.1 (HSP22.8 [Citrullus lanatus])

HSP 1 Score: 384.8 bits (987), Expect = 4.9e-103
Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 25  LQNSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHS 84
           L+ SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYY+EDRHS
Sbjct: 3   LRFSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYVEDRHS 62

Query: 85  YGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCI 144
           YGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCI
Sbjct: 63  YGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCI 122

Query: 145 STEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKK 204
           STEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKK
Sbjct: 123 STEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKK 182

Query: 205 PTARVVQISGH 216
           PTARVVQI+GH
Sbjct: 183 PTARVVQIAGH 193

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BLAST of Clc10G21170 vs. NCBI nr
Match: XP_038904007.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92
Identity = 173/193 (89.64%), Postives = 179/193 (92.75%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQ 87
           SNFFP DRKERYYVEDR G +KCPEDRKE YHGEDRR +DK  DDRKERYYIEDRHSYGQ
Sbjct: 6   SNFFPADRKERYYVEDRSGSEKCPEDRKERYHGEDRRTYDKLFDDRKERYYIEDRHSYGQ 65

Query: 88  FHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVL 147
           FHEKDV+AADPFR     NSSAVNAQIDWKETADAHVF+LDLPGVKKHEVKLEIEE+GVL
Sbjct: 66  FHEKDVVAADPFRTSIASNSSAVNAQIDWKETADAHVFRLDLPGVKKHEVKLEIEENGVL 125

Query: 148 CISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHF 207
           CISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEM+NGVLTVTVPKY F
Sbjct: 126 CISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMNNGVLTVTVPKYQF 185

Query: 208 KKPTARVVQISGH 216
           KKP ARVVQISGH
Sbjct: 186 KKPMARVVQISGH 198

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BLAST of Clc10G21170 vs. NCBI nr
Match: XP_008442494.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0044133.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK25005.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 6.6e-84
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQ 87
           S+FFPT+RKE+YYVEDR GC+KCPEDRKE Y GEDRR FDKF DDRKERYY+EDRHSY Q
Sbjct: 7   SSFFPTNRKEQYYVEDRSGCEKCPEDRKERYQGEDRRAFDKFFDDRKERYYVEDRHSYRQ 66

Query: 88  FHEKDVIAADPFR------NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGV 147
           F EKDV+  D FR      +S+A+NAQIDWKETADA+VFKLDLPGVKKHE+KLEIE++G 
Sbjct: 67  FPEKDVVPVDSFRSSIAPNSSAAINAQIDWKETADAYVFKLDLPGVKKHEMKLEIEDNGA 126

Query: 148 LCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYH 207
           LCISTEIRAEREER DIWRRVERSSGR YRRIVLPEGADVDKVRAEM NGVLTVTVPKY 
Sbjct: 127 LCISTEIRAEREERIDIWRRVERSSGRIYRRIVLPEGADVDKVRAEMYNGVLTVTVPKYQ 186

Query: 208 FKKPTARVVQISGH 216
           F+KP ARVVQISGH
Sbjct: 187 FRKPMARVVQISGH 200

[Close]

BLAST of Clc10G21170 vs. NCBI nr
Match: XP_004137748.1 (18.1 kDa class I heat shock protein [Cucumis sativus] >KGN58817.1 hypothetical protein Csa_002606 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 7.3e-83
Identity = 158/194 (81.44%), Postives = 173/194 (89.18%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCP-EDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYG 87
           S+FFPT+RKE+YYVEDR GC+KCP EDRKE Y GEDRR+FDKF DDRKERYY+E+RHSY 
Sbjct: 7   SSFFPTNRKEQYYVEDRSGCEKCPTEDRKERYQGEDRRMFDKFFDDRKERYYVENRHSYR 66

Query: 88  QFHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGV 147
           QF EKDV++AD FR     NSSA+NAQIDWKET DA+VFKLDLPGVKKHEVKLEIEE+G 
Sbjct: 67  QFPEKDVVSADSFRSSVAPNSSAINAQIDWKETGDAYVFKLDLPGVKKHEVKLEIEENGA 126

Query: 148 LCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYH 207
           LCISTEIRAEREERTDIW R+ERSSGR YRRIVLP+GADVDKVRAEM NGVL VTVPKY 
Sbjct: 127 LCISTEIRAEREERTDIWHRMERSSGRIYRRIVLPDGADVDKVRAEMYNGVLNVTVPKYQ 186

Query: 208 FKKPTARVVQISGH 216
           F+KP ARVVQISGH
Sbjct: 187 FRKPMARVVQISGH 200

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BLAST of Clc10G21170 vs. NCBI nr
Match: XP_023539337.1 (18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-74
Identity = 146/193 (75.65%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQ 87
           +NFFPTDRKERYYVEDRP   K PED K  Y+ EDRR FDKF +++KERYYI+DR+SY Q
Sbjct: 6   NNFFPTDRKERYYVEDRPSGGKSPEDWKGRYYVEDRRSFDKFPEEQKERYYIKDRNSYDQ 65

Query: 88  FHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVL 147
           FHEKD +A  PFR     NSSA+NAQID+KETADAHV +L+LPGVKKHEVKLEIE++G L
Sbjct: 66  FHEKDALAG-PFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGL 125

Query: 148 CISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHF 207
           CISTEIRAE+EE +DIWRRVERSSGRFYRR+VLPE ADVDKV+AEM+NG+L VTVPK+HF
Sbjct: 126 CISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILIVTVPKHHF 185

Query: 208 KKPTARVVQISGH 216
           KKP AR+VQISGH
Sbjct: 186 KKPIARIVQISGH 197

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BLAST of Clc10G21170 vs. ExPASy Swiss-Prot
Match: Q943E7 (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 91  KDVIAADPFRNSSA-VNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIR 150
           + ++ A   R+++A  NA++DWKET ++HVFK DLPGVKK EVK+E+EE  VL IS +  
Sbjct: 25  RSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRS 84

Query: 151 AEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARV 210
            E+E++ D W RVERSSG+F RR  LPE A VD+V+A M NGVLTVTVPK   KKP  + 
Sbjct: 85  KEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKA 144

Query: 211 VQISG 215
           ++ISG
Sbjct: 145 IEISG 149

[Close]

BLAST of Clc10G21170 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33
Identity = 74/145 (51.03%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 81  DRHSYGQFHEKDVIAADPFR-----------NSSAVNAQIDWKETADAHVFKLDLPGVKK 140
           DR S   F    +   DPFR           +S+  N +IDWKET + HVFK+DLPG+KK
Sbjct: 10  DRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKK 69

Query: 141 HEVKLEIEESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMS 200
            EVK+E+EE  VL IS E   E+E++ D W R+ERSSG+F RR  LPE A +D+V+A M 
Sbjct: 70  EEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASME 129

Query: 201 NGVLTVTVPKYHFKKPTARVVQISG 215
           NGVLTVTVPK   KKP  + ++ISG
Sbjct: 130 NGVLTVTVPKEEVKKPEVKSIEISG 154

[Close]

BLAST of Clc10G21170 vs. ExPASy Swiss-Prot
Match: O82011 (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-33
Identity = 75/145 (51.72%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 81  DRHSYGQFHEKDVIAADPFR-----------NSSAVNAQIDWKETADAHVFKLDLPGVKK 140
           DR S   F    +   DPFR            S+  N +IDWKET +AHVFK DLPG+K 
Sbjct: 10  DRRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKL 69

Query: 141 HEVKLEIEESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMS 200
            EVK+E+EE  VL IS E   E+E++ D W+RVERSSG+F RR  LPE A +D+V+A M 
Sbjct: 70  EEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASME 129

Query: 201 NGVLTVTVPKYHFKKPTARVVQISG 215
           NGVLTVTVPK   KKP  + ++ISG
Sbjct: 130 NGVLTVTVPKEEMKKPDVKSIEISG 154

[Close]

BLAST of Clc10G21170 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.2e-33
Identity = 77/157 (49.04%), Postives = 100/157 (63.69%), Query Frame = 0


Query: 58  YHGEDRRVFDKFVDDRKERYYIEDRHSYGQFHEKDVIAADPFRNSSAVNAQIDWKETADA 117
           + G    VFD F  D      + D      F+   + A+ P  NS+ V+ ++DWKET +A
Sbjct: 8   FGGRRSNVFDPFSLD------VWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEA 67

Query: 118 HVFKLDLPGVKKHEVKLEIEESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPE 177
           HVFK DLPG+KK EVK+EIE+  VL IS E   E+E++ D W R+ERSSG+F RR  LPE
Sbjct: 68  HVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPE 127

Query: 178 GADVDKVRAEMSNGVLTVTVPKYHFKKPTARVVQISG 215
            A +D+V+A M NGVLTVTVPK   KKP  + + ISG
Sbjct: 128 NAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Clc10G21170 vs. ExPASy Swiss-Prot
Match: Q943E6 (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.5e-33
Identity = 71/125 (56.80%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 91  KDVIAADPFRNSSA-VNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIR 150
           + V+ A    +++A  NA+IDWKET ++HVFK DLPGVKK EVK+E+EE  VL IS +  
Sbjct: 26  RSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRS 85

Query: 151 AEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARV 210
            E+E++ D W RVERSSG+F RR  LPE A VD+V+A M NGVLTVTVPK   KKP  + 
Sbjct: 86  KEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKA 145

Query: 211 VQISG 215
           ++ISG
Sbjct: 146 IEISG 150

[Close]

BLAST of Clc10G21170 vs. ExPASy TrEMBL
Match: H6TB36 (HSP22.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.4e-103
Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 25  LQNSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHS 84
           L+ SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYY+EDRHS
Sbjct: 3   LRFSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYVEDRHS 62

Query: 85  YGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCI 144
           YGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCI
Sbjct: 63  YGQFHEKDVIAADPFRNSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCI 122

Query: 145 STEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKK 204
           STEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKK
Sbjct: 123 STEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKK 182

Query: 205 PTARVVQISGH 216
           PTARVVQI+GH
Sbjct: 183 PTARVVQIAGH 193

[Close]

BLAST of Clc10G21170 vs. ExPASy TrEMBL
Match: A0A5A7TKV7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001230 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.2e-84
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQ 87
           S+FFPT+RKE+YYVEDR GC+KCPEDRKE Y GEDRR FDKF DDRKERYY+EDRHSY Q
Sbjct: 7   SSFFPTNRKEQYYVEDRSGCEKCPEDRKERYQGEDRRAFDKFFDDRKERYYVEDRHSYRQ 66

Query: 88  FHEKDVIAADPFR------NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGV 147
           F EKDV+  D FR      +S+A+NAQIDWKETADA+VFKLDLPGVKKHE+KLEIE++G 
Sbjct: 67  FPEKDVVPVDSFRSSIAPNSSAAINAQIDWKETADAYVFKLDLPGVKKHEMKLEIEDNGA 126

Query: 148 LCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYH 207
           LCISTEIRAEREER DIWRRVERSSGR YRRIVLPEGADVDKVRAEM NGVLTVTVPKY 
Sbjct: 127 LCISTEIRAEREERIDIWRRVERSSGRIYRRIVLPEGADVDKVRAEMYNGVLTVTVPKYQ 186

Query: 208 FKKPTARVVQISGH 216
           F+KP ARVVQISGH
Sbjct: 187 FRKPMARVVQISGH 200

[Close]

BLAST of Clc10G21170 vs. ExPASy TrEMBL
Match: A0A1S3B6K4 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103486347 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.2e-84
Identity = 158/194 (81.44%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQ 87
           S+FFPT+RKE+YYVEDR GC+KCPEDRKE Y GEDRR FDKF DDRKERYY+EDRHSY Q
Sbjct: 7   SSFFPTNRKEQYYVEDRSGCEKCPEDRKERYQGEDRRAFDKFFDDRKERYYVEDRHSYRQ 66

Query: 88  FHEKDVIAADPFR------NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGV 147
           F EKDV+  D FR      +S+A+NAQIDWKETADA+VFKLDLPGVKKHE+KLEIE++G 
Sbjct: 67  FPEKDVVPVDSFRSSIAPNSSAAINAQIDWKETADAYVFKLDLPGVKKHEMKLEIEDNGA 126

Query: 148 LCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYH 207
           LCISTEIRAEREER DIWRRVERSSGR YRRIVLPEGADVDKVRAEM NGVLTVTVPKY 
Sbjct: 127 LCISTEIRAEREERIDIWRRVERSSGRIYRRIVLPEGADVDKVRAEMYNGVLTVTVPKYQ 186

Query: 208 FKKPTARVVQISGH 216
           F+KP ARVVQISGH
Sbjct: 187 FRKPMARVVQISGH 200

[Close]

BLAST of Clc10G21170 vs. ExPASy TrEMBL
Match: A0A0A0LDJ8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733220 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.5e-83
Identity = 158/194 (81.44%), Postives = 173/194 (89.18%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCP-EDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYG 87
           S+FFPT+RKE+YYVEDR GC+KCP EDRKE Y GEDRR+FDKF DDRKERYY+E+RHSY 
Sbjct: 7   SSFFPTNRKEQYYVEDRSGCEKCPTEDRKERYQGEDRRMFDKFFDDRKERYYVENRHSYR 66

Query: 88  QFHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGV 147
           QF EKDV++AD FR     NSSA+NAQIDWKET DA+VFKLDLPGVKKHEVKLEIEE+G 
Sbjct: 67  QFPEKDVVSADSFRSSVAPNSSAINAQIDWKETGDAYVFKLDLPGVKKHEVKLEIEENGA 126

Query: 148 LCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYH 207
           LCISTEIRAEREERTDIW R+ERSSGR YRRIVLP+GADVDKVRAEM NGVL VTVPKY 
Sbjct: 127 LCISTEIRAEREERTDIWHRMERSSGRIYRRIVLPDGADVDKVRAEMYNGVLNVTVPKYQ 186

Query: 208 FKKPTARVVQISGH 216
           F+KP ARVVQISGH
Sbjct: 187 FRKPMARVVQISGH 200

[Close]

BLAST of Clc10G21170 vs. ExPASy TrEMBL
Match: A0A6J1FM77 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111447079 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 143/193 (74.09%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 28  SNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYIEDRHSYGQ 87
           ++FFPTDRKERYYVEDRP   K  ED K  Y+ EDRR FDKF +++KERYYI+DR+SY Q
Sbjct: 6   NDFFPTDRKERYYVEDRPSGGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDRNSYDQ 65

Query: 88  FHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVL 147
           FHEKD +A  PFR     NSSA+NAQ+D+KETADAHV +L+LPG+KKHEVKLEIE++G L
Sbjct: 66  FHEKDALAG-PFRTSMASNSSAMNAQVDFKETADAHVLRLELPGMKKHEVKLEIEDNGGL 125

Query: 148 CISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHF 207
           CISTEIRAE+EE +DIWRRVERSSGRFYRR+VLPE ADVDKV+AEM+NG+LTVTVPK+HF
Sbjct: 126 CISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHF 185

Query: 208 KKPTARVVQISGH 216
           KKP AR+VQISGH
Sbjct: 186 KKPIARIVQISGH 197

[Close]

BLAST of Clc10G21170 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 6.7e-34
Identity = 69/114 (60.53%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 101 NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIRAEREERTDIWR 160
           NS+ VNA++DW+ET +AHVFK DLPG+KK EVK+EIEE  VL IS E   E+E++ D W 
Sbjct: 40  NSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWH 99

Query: 161 RVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARVVQISG 215
           RVERSSG+F RR  LPE   +D+V+A M NGVLTVTVPK   KK   + +QISG
Sbjct: 100 RVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Clc10G21170 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 71/120 (59.17%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 98  PFRNSSAV-NAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIRAEREERT 157
           P  +SSA+ NA++DWKETA+AHVFK DLPG+KK EVK+EIE+  VL IS E   E+EE+ 
Sbjct: 36  PSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQ 95

Query: 158 DIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARV--VQISG 215
           D W RVERSSG F R+  LPE   +D+V+A M NGVLTVTVPK    K  A+V  + ISG
Sbjct: 96  DTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155

[Close]

BLAST of Clc10G21170 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 77  YYIEDRHSYGQFHEKDVIAADPFR-----------NSSAVNAQIDWKETADAHVFKLDLP 136
           ++  +R S   F    +   DPF+            S+  NA++DWKETA+AHVFK DLP
Sbjct: 7   FFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLP 66

Query: 137 GVKKHEVKLEIEESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVR 196
           G+KK EVK+EIE+  VL IS E   E+EE+ D W RVERSSG+F R+  LPE   +D+V+
Sbjct: 67  GMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVK 126

Query: 197 AEMSNGVLTVTVPKYHFKKPTARV--VQISG 215
           A M NGVLTVTVPK    K  A+V  + ISG
Sbjct: 127 ASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of Clc10G21170 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 63/109 (57.80%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 106 NAQIDWKETADAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIRAEREERTDIWRRVERS 165
           NA++DW+ET +AHVFK D+PG+KK EVK+E+E+  +L IS E  +E EE++D W RVERS
Sbjct: 48  NAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERS 107

Query: 166 SGRFYRRIVLPEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARVVQISG 215
           SG+F RR  LPE A V++V+A M NGVL+VTVPK    KP  + V ISG
Sbjct: 108 SGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Clc10G21170 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 131.7 bits (330), Expect = 6.9e-31
Identity = 76/159 (47.80%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 58  YHGEDRRVFDKFVDDRKERYYIEDRHSYGQFHEKDVIA-ADPFRNSSA-VNAQIDWKETA 117
           + G    VFD F  D  + +        G F     +A A   R+ +A  NA++DWKET 
Sbjct: 8   FGGRRSNVFDPFSQDLWDPF-------EGFFTPSSALANASTARDVAAFTNARVDWKETP 67

Query: 118 DAHVFKLDLPGVKKHEVKLEIEESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVL 177
           +AHVFK DLPG+KK EVK+E+E+  VL IS E   E EE+ D W RVER+SG+F RR  L
Sbjct: 68  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 127

Query: 178 PEGADVDKVRAEMSNGVLTVTVPKYHFKKPTARVVQISG 215
           PE A +++V+A M NGVLTV VPK   KKP  + + ISG
Sbjct: 128 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

The following BLAST results are available for this feature:

BLAST of Clc10G21170 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55783.1	4.9e-103	97.91	HSP22.8 [Citrullus lanatus]	[more]
XP_038904007.1	1.3e-92	89.64	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]
XP_008442494.1	6.6e-84	81.44	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0044133.1...	[more]
XP_004137748.1	7.3e-83	81.44	18.1 kDa class I heat shock protein [Cucumis sativus] >KGN58817.1 hypothetical p...	[more]
XP_023539337.1	1.3e-74	75.65	18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc10G21170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q943E7	2.5e-33	56.00	16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P30221	2.5e-33	51.03	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
O82011	3.2e-33	51.72	17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P27880	4.2e-33	49.04	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
Q943E6	5.5e-33	56.80	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Clc10G21170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB36	2.4e-103	97.91	HSP22.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5A7TKV7	3.2e-84	81.44	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B6K4	3.2e-84	81.44	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103486347...	[more]
A0A0A0LDJ8	3.5e-83	81.44	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733220 PE=3 S...	[more]
A0A6J1FM77	1.1e-73	74.09	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Clc10G21170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29500.1	6.7e-34	60.53	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	4.8e-32	59.17	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.1e-31	49.01	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.1e-31	57.80	heat shock protein 17.4	[more]
AT5G59720.1	6.9e-31	47.80	heat shock protein 18.2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 59..214 e-value: 7.3E-36 score: 125.1
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 98..214
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 110..213 e-value: 1.5E-24 score: 86.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 100..215 score: 25.387705
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 63..214
None	No IPR available	PANTHER	PTHR11527:SF305	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 63..214
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 108..199 e-value: 1.75704E-42 score: 136.666

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G21170.2	Clc10G21170.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding