Clc10G20320 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G20320
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr10: 33855024 .. 33855956 (+)
RNA-Seq Expression	Clc10G20320
Synteny	Clc10G20320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGATCCATTTTCAGCTTCTTATTTACGAGAATTCCCCCAAATTTTCTTTATAAAATCAAACAAATCAATAATAAAGGACATATCTCATAATGCTTACGATCCTCCTCGCCGTTCTCCGCCATTAACGATCATCGCAAGGGAGGAAAAAAAAAAAAACTTCAGAAAAGATGAGCGCCGTCTGCACAACGAAGTACTGCATCAGCACCGCCGGCAATAGCCGTCCGCCGCGCTCGGCCTACATCAACCTCTACAACTGGACGGATTCGGACAACGAGATCGTGAAATCGGCGATTCCGAGAGCGAGGCGCGGAGTTTCGGTAGTGGATGGAGTATCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTTTCGACGAAGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAGAAGATCGGGGGAGAAGAGGAATCTGAATCGGAATCGAAAGAGGAAGAAGAAGTGTTTGATTTGGAAGAAGATGAAGGAATTTTCGTGTAGTTTCATTCTGTTCGGGATTTTTCGAAGGATTTTGTCGTGTGCTGCGAGTATTGATGTGGTGGAACAGAGTAGTGGAAGAAATGGTAATTGATTCTGAGTTTAGAGTTTGATCTGTTCTTTCTTCTTCTTCTTCATCTTCATCTTTCTTCTCAGTTTTCTTCTGTAATTGATTTTGATAATGGATTTTGTTTGTGTTTAGTTCATTAATTTTTAGGATGAACTTGCTTTCTTCTTAACAGATTGAAATCATCTTCATCGCTTCATATTTCATTCAGATCTCTCTTCCTTCTTATCTATAGAAATTATTCATCGAATAGTTTGTCATCTAAGAGGCTTTCATTTTTCTTTGTTACATCATAAATTTGGACTCTAGAGTTAATCTTTTTTAT

mRNA sequence

CTCGGATCCATTTTCAGCTTCTTATTTACGAGAATTCCCCCAAATTTTCTTTATAAAATCAAACAAATCAATAATAAAGGACATATCTCATAATGCTTACGATCCTCCTCGCCGTTCTCCGCCATTAACGATCATCGCAAGGGAGGAAAAAAAAAAAAACTTCAGAAAAGATGAGCGCCGTCTGCACAACGAAGTACTGCATCAGCACCGCCGGCAATAGCCGTCCGCCGCGCTCGGCCTACATCAACCTCTACAACTGGACGGATTCGGACAACGAGATCGTGAAATCGGCGATTCCGAGAGCGAGGCGCGGAGTTTCGGTAGTGGATGGAGTATCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTTTCGACGAAGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAGAAGATCGGGGGAGAAGAGGAATCTGAATCGGAATCGAAAGAGGAAGAAGAAGTGTTTGATTTGGAAGAAGATGAAGGAATTTTCGTGTAGTTTCATTCTGTTCGGGATTTTTCGAAGGATTTTGTCGTGTGCTGCGAGTATTGATGTGGTGGAACAGAGTAGTGGAAGAAATGGTAATTGATTCTGAGTTTAGAGTTTGATCTGTTCTTTCTTCTTCTTCTTCATCTTCATCTTTCTTCTCAGTTTTCTTCTGTAATTGATTTTGATAATGGATTTTGTTTGTGTTTAGTTCATTAATTTTTAGGATGAACTTGCTTTCTTCTTAACAGATTGAAATCATCTTCATCGCTTCATATTTCATTCAGATCTCTCTTCCTTCTTATCTATAGAAATTATTCATCGAATAGTTTGTCATCTAAGAGGCTTTCATTTTTCTTTGTTACATCATAAATTTGGACTCTAGAGTTAATCTTTTTTAT

Coding sequence (CDS)

ATGAGCGCCGTCTGCACAACGAAGTACTGCATCAGCACCGCCGGCAATAGCCGTCCGCCGCGCTCGGCCTACATCAACCTCTACAACTGGACGGATTCGGACAACGAGATCGTGAAATCGGCGATTCCGAGAGCGAGGCGCGGAGTTTCGGTAGTGGATGGAGTATCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTTTCGACGAAGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAGAAGATCGGGGGAGAAGAGGAATCTGAATCGGAATCGAAAGAGGAAGAAGAAGTGTTTGATTTGGAAGAAGATGAAGGAATTTTCGTGTAGTTTCATTCTGTTCGGGATTTTTCGAAGGATTTTGTCGTGTGCTGCGAGTATTGATGTGGTGGAACAGAGTAGTGGAAGAAATGGTAATTGA

Protein sequence

MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

Homology

[Close]

BLAST of Clc10G20320 vs. NCBI nr
Match: XP_023528009.1 (uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 124/156 (79.49%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEQRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. NCBI nr
Match: XP_022983914.1 (uncharacterized protein LOC111482393 [Cucurbita maxima])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 124/156 (79.49%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNRNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEQRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. NCBI nr
Match: XP_022934190.1 (uncharacterized protein LOC111441435 [Cucurbita moschata])

HSP 1 Score: 234.6 bits (597), Expect = 5.8e-58
Identity = 123/156 (78.85%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. NCBI nr
Match: KAG7017326.1 (hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 122/156 (78.21%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQ+
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQI 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. NCBI nr
Match: KAG6580574.1 (hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232.3 bits (591), Expect = 2.9e-57
Identity = 122/156 (78.21%), Postives = 133/156 (85.26%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTD DNE  KSAIPR RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDLDNETDKSAIPRTRRRVPVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. ExPASy TrEMBL
Match: A0A6J1J8Y5 (uncharacterized protein LOC111482393 OS=Cucurbita maxima OX=3661 GN=LOC111482393 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59
Identity = 124/156 (79.49%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNRNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEQRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. ExPASy TrEMBL
Match: A0A6J1F6Z2 (uncharacterized protein LOC111441435 OS=Cucurbita moschata OX=3662 GN=LOC111441435 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58
Identity = 123/156 (78.85%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR--NLNRNRKRKKKCLIWKK 120
           YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+KR  N NRNR RK+KC IW+K
Sbjct: 61  YLRSYKFST-KESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRK 120

Query: 121 MKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
           MK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Sbjct: 121 MKKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155

[Close]

BLAST of Clc10G20320 vs. ExPASy TrEMBL
Match: A0A0A0LFM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G735550 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 119/161 (73.91%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTTK+CIS A + R PR+ YINL NWT+S+NEIVKSAIP+ARR V VVDGVSCRQM
Sbjct: 1   MSAVCTTKFCISDARSVRTPRAVYINLNNWTESENEIVKSAIPKARRRVQVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRN---------RKRKK 120
           YLRSY FS KKESV EKT++CL KVKEKLGQRKRR  GE RNL+ N         +KR +
Sbjct: 61  YLRSYTFSRKKESVGEKTKKCLEKVKEKLGQRKRRSLGENRNLSLNLNMNLNGKRKKRNE 120

Query: 121 KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN 153
           KCLIWKKMK+FSCSFI+FGIFRR+LSCAA+IDVVEQS GRN
Sbjct: 121 KCLIWKKMKKFSCSFIMFGIFRRVLSCAATIDVVEQSCGRN 161

[Close]

BLAST of Clc10G20320 vs. ExPASy TrEMBL
Match: A0A5D3DNA8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002000 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 122/162 (75.31%), Postives = 133/162 (82.10%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTTK+CIS A + R PR+ YINL NWTDS+NEIVKSA+P+ RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTKFCISDARSVRTPRAVYINLNNWTDSENEIVKSAVPKVRRRVRVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR-------NLNRNRKRKK-- 120
           YLRSYKFS KKESV EKT++CL KVKEKLGQRKR   GE         NLN NRKRKK  
Sbjct: 61  YLRSYKFSRKKESVGEKTKKCLEKVKEKLGQRKRGSLGEDNRNLSLNLNLNLNRKRKKRN 120

Query: 121 -KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN 153
            KCLIWKKMK+FSCSFI+FGIFRRILSCAA+IDVVEQS GRN
Sbjct: 121 GKCLIWKKMKKFSCSFIMFGIFRRILSCAATIDVVEQSRGRN 162

[Close]

BLAST of Clc10G20320 vs. ExPASy TrEMBL
Match: A0A1S3B628 (uncharacterized protein LOC103486422 OS=Cucumis melo OX=3656 GN=LOC103486422 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 122/162 (75.31%), Postives = 133/162 (82.10%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQM 60
           MSAVCTTK+CIS A + R PR+ YINL NWTDS+NEIVKSA+P+ RR V VVDGVSCRQM
Sbjct: 1   MSAVCTTKFCISDARSVRTPRAVYINLNNWTDSENEIVKSAVPKVRRRVRVVDGVSCRQM 60

Query: 61  YLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKR-------NLNRNRKRKK-- 120
           YLRSYKFS KKESV EKT++CL KVKEKLGQRKR   GE         NLN NRKRKK  
Sbjct: 61  YLRSYKFSRKKESVGEKTKKCLEKVKEKLGQRKRGSLGEDNRNLSLNLNLNLNRKRKKRN 120

Query: 121 -KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN 153
            KCLIWKKMK+FSCSFI+FGIFRRILSCAA+IDVVEQS GRN
Sbjct: 121 GKCLIWKKMKKFSCSFIMFGIFRRILSCAATIDVVEQSRGRN 162

[Close]

BLAST of Clc10G20320 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 1   MSAVCTTKYCISTAGNS----RPPRSAYINLYNWTDSDNEIVKS-----AIPRARRGVSV 60
           M++VC +  CI+ A +     RP R++Y+NLY W +SD E V+S      +P AR    V
Sbjct: 1   MNSVCISS-CINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRRGGGLPAAR----V 60

Query: 61  VDGVSCRQMYLRSYKFS-----TKKESVPEKTR-RCLGKVKEKLGQRKR----------- 120
           VD +SCRQMYLRSY FS     +K E V   T+  CLG+VK     R++           
Sbjct: 61  VDSISCRQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRVKGTASSRRKSKEENGIIIVE 120

Query: 121 ----RRSGEKRNLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVE 147
               RR GEKR ++R  K+++ C             ++  IFRR+LSCAA++DVV+
Sbjct: 121 STKPRRRGEKRRVSRKNKQEQAC------------SVILRIFRRLLSCAATVDVVD 159

[Close]

BLAST of Clc10G20320 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06
Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 20  PRSAYINLYNWTDSDNEIVKSA-IPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKT 79
           P   Y NLY W  ++ E V+S     ++   +VVD +SCRQMYLRSY FST +E+  +  
Sbjct: 21  PVMTYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSISCRQMYLRSYTFST-EENEEDGD 80

Query: 80  RRCLGKVKEKLGQRKRRRSGEKRNLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSC 139
                 V  +  Q   R  G ++   +N  R          K +SC   +F + R+ LSC
Sbjct: 81  GGDGEAVTRRHNQSCFRGGGGRKKAAKNAMRNN--------KTWSCRTFVFRLVRKCLSC 137

Query: 140 AASIDV 145
           A++  V
Sbjct: 141 ASTTKV 137

[Close]

BLAST of Clc10G20320 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 10 CISTAGNS---RPPRSAYINLYNWTDSDNEIVKS-AIPRARRGVSVVDGVSCRQMYLRSY 69
          C++   N+   RP R+ +  ++ W  ++ E V+S +   + R  + V+ +SCRQMYLRSY
Sbjct: 9  CVNIKNNAICVRPGRT-HAKIHKWPMAEVEFVQSISQDGSPRRTTAVESLSCRQMYLRSY 68

Query: 70 KFSTKKES 74
           FS K+E+
Sbjct: 69 TFSRKEEN 75

The following BLAST results are available for this feature:

BLAST of Clc10G20320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528009.1	1.5e-58	79.49	uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]	[more]
XP_022983914.1	1.5e-58	79.49	uncharacterized protein LOC111482393 [Cucurbita maxima]	[more]
XP_022934190.1	5.8e-58	78.85	uncharacterized protein LOC111441435 [Cucurbita moschata]	[more]
KAG7017326.1	1.7e-57	78.21	hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580574.1	2.9e-57	78.21	hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc10G20320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G20320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8Y5	7.4e-59	79.49	uncharacterized protein LOC111482393 OS=Cucurbita maxima OX=3661 GN=LOC111482393...	[more]
A0A6J1F6Z2	2.8e-58	78.85	uncharacterized protein LOC111441435 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A0A0LFM8	1.7e-55	73.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G735550 PE=4 SV=1	[more]
A0A5D3DNA8	3.8e-55	75.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B628	3.8e-55	75.31	uncharacterized protein LOC103486422 OS=Cucumis melo OX=3656 GN=LOC103486422 PE=...	[more]

BLAST of Clc10G20320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02640.1	2.8e-18	38.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G46300.1	1.5e-06	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G46310.1	1.4e-04	36.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106
None	No IPR available	PANTHER	PTHR35304:SF1	OS05G0120300 PROTEIN	coord: 1..148
None	No IPR available	PANTHER	PTHR35304	OS05G0120300 PROTEIN-RELATED	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G20320.1	Clc10G20320.1	mRNA