Clc10G19030 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G19030
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	homeobox-leucine zipper protein ATHB-22-like
Location	ClcChr10: 32832014 .. 32834108 (+)
RNA-Seq Expression	Clc10G19030
Synteny	Clc10G19030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAATAGAGTGAAGAAGGACAAATGGGGACAATTACTACATAGATCGTCTAAGATTTTTTTAAAGAAAATCAAAATTAAAAAAATTTGGAGTAGAAAAATTGTATATATATATAGAAAGTTAGAATGTAAAATTTTGTCTCTGGCTATGAGAATTTCAGGCGTAGATGTGAAGCATTCGGCGATGGCAGGGGCGTCCGAGACAGTGCTGCAAGGGCTAGTTCCAGGGATGGATATGAACAGCTATGGCAATTTGGAGAAGAAGAAGCGGCTGAGTAGCGAGCAGCTCGAGTCGCTTGAACGAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGAAAGCAGAAGCTGTCGAAGGAACTCGGTCTGCAGCCTCGTCAGATCGCCGTTTGGTTTCAGAACCGTCGTGCGAGGTGGAAGGCAAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAGGAGTTTGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAAGAGGTAAGAAAAAAAACTTAATTTCTTTTATTTAAATTTTCTTGATCTATGAAATGTCTGAGATTTTTGTGTTAGGGTTGGCGTTTTGAGGGTTAAGTTGTGGAAAAAAAAAAACAAAAATAAATCCTCTCTTTTTTTCAAATCTTGTGAAGATCTCAATTAAGACTAATTTATGGATTAGGGTTTGTTGACAAAAAAAACTTTCTTGATTTATGAGTGGATTTGAGATGATTACAGTAGGGGATGATATTTTGTGGTTAATTAAGTTGTTTATAAAGAAAATTTTTAGAGAAATTTTTTTCTCCAAATTAATAATCTCTCTTCAAGATCTCAATTTAAAGCTTTCATTAGTAAGCTAGGGTTTTTTTCTTTTTTCTTTTTTGAAGAAAATTATGGGATCTTATAGAAATGTTTTGAAAAGTAGTTTTCAGTGCTTTTTAGATAAATTGCTTTTAAAGAAAAACTTATTTGAATAATTTCTTTTATTTTTGTTCTTAAATATTACTTTGTGAACCCAAAGCTTTCATTAAGTAGACTAGGGTTTATTTAAGAAAATTATGAGCTCTTTGGAAATGTTTGGAAAAATAGCTTTTGTGCTTTTTATAACAAAAATATGTTTGGAATGATTGACTTTATGAAAGTTGATTTCTTGTAATGTACCTTTTAATTATCAAATCTTGTGATCATCTTAAAGCTTTAATCAATAGGCACTTAATTTAAGGATAATTCATTAAGAAAACTTGTTATTTTTCAACATATATTTTTATTCAAGATGAGCTTTGGGGTTTTTACTTTAAAATGAATAACAGGACAATATATATGATAATGGAGTAGTGATTATGTAATTAGTACAAATAAGACAGCAATTTATCATTCATATCAATTTTCATTTTTTATTATTATTGAATTATCATTTCCCCCTTAAATTAAAGTTGCTAAGATATAGTTGAATATAGCATCTTTTAAATGCCAAACAAACCCCTTAGATTAAATTAGACAGATTAAATTAGACATCTTCATATAACATTGAACTAAAGAAACTAATATTTCTTGATGGTGAAGAAGGGATATAAAGAAAATAAATTGTAAGAACTTAAATTAATGGGCTAGTATAAATTAAATACTTTAACACTTACACATCTTTGAAAATTTATAAAAAATTCAACTAGTGAAAATAAATATTAATCGAAGAAAAAATTATAACAATATAGAAGTTTGAATGCAAATCTTCTATTTTCATATCTGATGAAATTATAGGACGAGATAACGGTGAGAATTTAATTATATCAATAAATTAACCCACTTGCAGGTAATGAAGCTCAAGAGCATGCTGAGAGAACTTCAAGCTGCAAGGAATCAAGTGTCGACGGTGTACACCGACTTGTCGGGGGAGGAGACAGTGGAAAGCACCTCGGTCGGAGCTGGCTGCTCGAGCAAACCGAGACCAGTGGCTGCAGCAGCAGCAGTGGCAGCCGCAAACCACTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGATTACAACCCCATGTCTCCAACTTTCTGGGGATCTCTTCCATCCTCTTATCATCCCCAGTAG

mRNA sequence

ATGCAGAATAGAGTGAAGAAGGACAAATGGGGACAATTACTACATAGATCGTCTAAGATTTTTTTAAAGAAAATCAAAATTAAAAAAATTTGGAGTAGAAAAATTGTATATATATATAGAAAGTTAGAATGTAAAATTTTGTCTCTGGCTATGAGAATTTCAGGCGTAGATGTGAAGCATTCGGCGATGGCAGGGGCGTCCGAGACAGTGCTGCAAGGGCTAGTTCCAGGGATGGATATGAACAGCTATGGCAATTTGGAGAAGAAGAAGCGGCTGAGTAGCGAGCAGCTCGAGTCGCTTGAACGAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGAAAGCAGAAGCTGTCGAAGGAACTCGGTCTGCAGCCTCGTCAGATCGCCGTTTGGTTTCAGAACCGTCGTGCGAGGTGGAAGGCAAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAGGAGTTTGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAAGAGGTAATGAAGCTCAAGAGCATGCTGAGAGAACTTCAAGCTGCAAGGAATCAAGTGTCGACGGTGTACACCGACTTGTCGGGGGAGGAGACAGTGGAAAGCACCTCGGTCGGAGCTGGCTGCTCGAGCAAACCGAGACCAGTGGCTGCAGCAGCAGCAGTGGCAGCCGCAAACCACTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGATTACAACCCCATGTCTCCAACTTTCTGGGGATCTCTTCCATCCTCTTATCATCCCCAGTAG

Coding sequence (CDS)

ATGCAGAATAGAGTGAAGAAGGACAAATGGGGACAATTACTACATAGATCGTCTAAGATTTTTTTAAAGAAAATCAAAATTAAAAAAATTTGGAGTAGAAAAATTGTATATATATATAGAAAGTTAGAATGTAAAATTTTGTCTCTGGCTATGAGAATTTCAGGCGTAGATGTGAAGCATTCGGCGATGGCAGGGGCGTCCGAGACAGTGCTGCAAGGGCTAGTTCCAGGGATGGATATGAACAGCTATGGCAATTTGGAGAAGAAGAAGCGGCTGAGTAGCGAGCAGCTCGAGTCGCTTGAACGAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGAAAGCAGAAGCTGTCGAAGGAACTCGGTCTGCAGCCTCGTCAGATCGCCGTTTGGTTTCAGAACCGTCGTGCGAGGTGGAAGGCAAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAGGAGTTTGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAAGAGGTAATGAAGCTCAAGAGCATGCTGAGAGAACTTCAAGCTGCAAGGAATCAAGTGTCGACGGTGTACACCGACTTGTCGGGGGAGGAGACAGTGGAAAGCACCTCGGTCGGAGCTGGCTGCTCGAGCAAACCGAGACCAGTGGCTGCAGCAGCAGCAGTGGCAGCCGCAAACCACTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGATTACAACCCCATGTCTCCAACTTTCTGGGGATCTCTTCCATCCTCTTATCATCCCCAGTAG

Protein sequence

MQNRVKKDKWGQLLHRSSKIFLKKIKIKKIWSRKIVYIYRKLECKILSLAMRISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTPPEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ

Homology

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BLAST of Clc10G19030 vs. NCBI nr
Match: XP_008442780.1 (PREDICTED: homeobox-leucine zipper protein ATHB-22-like isoform X1 [Cucumis melo] >XP_011651984.1 homeobox-leucine zipper protein ATHB-22 isoform X1 [Cucumis sativus] >AIS39465.1 multicellular trichome development class I homeodomain-leucine zipper transcription factor [Cucumis sativus] >KAE8651070.1 hypothetical protein Csa_001307 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 2.3e-107
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 52  RISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 111
           ++SGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD
Sbjct: 32  QVSGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 91

Query: 112 PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 171
           PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM
Sbjct: 92  PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 151

Query: 172 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTP 231
           KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TP
Sbjct: 152 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTP 211

Query: 232 PEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           PEQCNYVFNTE+YNPMSP FWGSLPSSYHPQ
Sbjct: 212 PEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 242

[Close]

BLAST of Clc10G19030 vs. NCBI nr
Match: XP_004138002.1 (homeobox-leucine zipper protein ATHB-22 isoform X2 [Cucumis sativus] >XP_008442781.1 PREDICTED: homeobox-leucine zipper protein ATHB-22-like isoform X2 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106
Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 52  RISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 111
           +  GVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD
Sbjct: 30  QFQGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 89

Query: 112 PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 171
           PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM
Sbjct: 90  PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 149

Query: 172 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTP 231
           KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TP
Sbjct: 150 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTP 209

Query: 232 PEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           PEQCNYVFNTE+YNPMSP FWGSLPSSYHPQ
Sbjct: 210 PEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

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BLAST of Clc10G19030 vs. NCBI nr
Match: XP_038905425.1 (homeobox-leucine zipper protein ATHB-22-like [Benincasa hispida])

HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 55  GVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDR 114
           GVDVKHS MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDR
Sbjct: 35  GVDVKHSTMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDR 94

Query: 115 KQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLK 174
           KQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLK
Sbjct: 95  KQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLK 154

Query: 175 SMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPV-AAAAAVAAANHYPTPPE 234
           SMLRELQ ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPV AAAAAVAAANHYPTPPE
Sbjct: 155 SMLRELQTARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAAVAAANHYPTPPE 214

Query: 235 QCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           QCNYVFNTEDYNPMSPTFWGSLPSSYHPQ
Sbjct: 215 QCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 243

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BLAST of Clc10G19030 vs. NCBI nr
Match: KAG7017408.1 (putative homeobox-leucine zipper protein ATHB-51 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.3 bits (983), Expect = 1.7e-102
Identity = 196/208 (94.23%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 55  GVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDR 114
           G+DVKHSAMAG SETVLQGLVPGMDMNSYGNL+KKKRLSSEQLESLERSFQEEIKLDP+R
Sbjct: 33  GIDVKHSAMAGTSETVLQGLVPGMDMNSYGNLDKKKRLSSEQLESLERSFQEEIKLDPNR 92

Query: 115 KQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLK 174
           KQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEV+KL+
Sbjct: 93  KQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLR 152

Query: 175 SMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTPPEQ 234
           SMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPR VAAAAA AAAN YPTPPEQ
Sbjct: 153 SMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRAVAAAAAAAAANQYPTPPEQ 212

Query: 235 CNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           CNYVFNTE+YNPMSPTFWGSLP +YHPQ
Sbjct: 213 CNYVFNTEEYNPMSPTFWGSLPPTYHPQ 240

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BLAST of Clc10G19030 vs. NCBI nr
Match: KAA0043935.1 (homeobox-leucine zipper protein ATHB-22-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-101
Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 63  MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL 122
           MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL
Sbjct: 1   MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL 60

Query: 123 GLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQA 182
           GLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQA
Sbjct: 61  GLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQA 120

Query: 183 ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTPPEQCNYVFNTE 242
           ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TPPEQCNYVFNTE
Sbjct: 121 ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTPPEQCNYVFNTE 180

Query: 243 DYNPMSPTFWGSLPSSYHPQ 263
           +YNPMSP FWGSLPSSYHPQ
Sbjct: 181 EYNPMSPAFWGSLPSSYHPQ 200

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BLAST of Clc10G19030 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-35
Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 0


Query: 81  NSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARW 140
           N+   + KKKRL+S QL SLERSFQEEIKLD DRK KLS+ELGLQPRQIAVWFQNRRARW
Sbjct: 70  NNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARW 129

Query: 141 KAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEE-T 200
           KAKQLE LYD+L+QE+D +SREK  L +EV KL+++LR+    + Q+S     +SGEE T
Sbjct: 130 KAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEEDT 189

Query: 201 VESTSV 206
           VE +SV
Sbjct: 190 VEISSV 195

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BLAST of Clc10G19030 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.4e-32
Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 63  MAGASETVLQGLVP--------GMDMNSY-GNLEKKKRLSSEQLESLERSFQEEI----- 122
           M GA + +L   VP        G + NS+ G  +KKK+++SEQL+ LERSFQEEI     
Sbjct: 39  MMGAQQDILH--VPLAMVESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPD 98

Query: 123 ---KLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHK 180
              KL+PDRK KLSKELGLQPRQIAVWFQNR+ARWK KQLEHLY++L+QEFD +SREK  
Sbjct: 99  RKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKEL 158

[Close]

BLAST of Clc10G19030 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 84  GNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAK 143
           G  EKK+RLS EQ+ +LERSF+ E KL+P+RK +L+++LGLQPRQ+AVWFQNRRARWK K
Sbjct: 47  GGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTK 106

Query: 144 QLE-------HLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSG 203
           QLE       H YD+L+ + DA+ R+K  L  E+ +LK+ L + +AA +     +T +  
Sbjct: 107 QLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAAS-----FTSVKE 166

Query: 204 EETVESTSVGAGCSSKPRPVAA------AAAVAAANHYPTPPEQCNYV 239
           E         AG  S     +A      AA  A A      PE C ++
Sbjct: 167 EPAASDGPPAAGFGSSDSDSSAVLNDVDAAGAAPAATDALAPEACTFL 209

[Close]

BLAST of Clc10G19030 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 84  GNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAK 143
           G  EKK+RLS EQ+ +LERSF+ E KL+P+RK +L+++LGLQPRQ+AVWFQNRRARWK K
Sbjct: 47  GGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTK 106

Query: 144 QLE-------HLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSG 203
           QLE       H YD+L+ + DA+ R+K  L  E+ +LK+ L + +AA +     +T +  
Sbjct: 107 QLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAAS-----FTSVKE 166

Query: 204 EETVESTSVGAGCSSKPRPVAA------AAAVAAANHYPTPPEQCNYV 239
           E         AG  S     +A      AA  A A      PE C ++
Sbjct: 167 EPAASDGPPAAGFGSSDSDSSAVLNDVDAAGAAPAATDALAPEACTFL 209

[Close]

BLAST of Clc10G19030 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 87  EKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 146
           EKK+RL+ EQ+  LERSF+EE KL+P+RK +L+++LGLQPRQ+AVWFQNRRARWK KQLE
Sbjct: 78  EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLE 137

Query: 147 HLYDTLKQEFDAIS-------REKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEET 206
             +D LK  FDA+        ++ H+L  +VM L   L+E +      +    D+ G   
Sbjct: 138 RDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPA 197

Query: 207 VESTSVGAGCSSKPRPVAAAAA 222
                V    + +P    AAAA
Sbjct: 198 AADVKVAVPDAEEPALEEAAAA 219

[Close]

BLAST of Clc10G19030 vs. ExPASy TrEMBL
Match: A0A097A1J6 (Multicellular trichome development class I homeodomain-leucine zipper transcription factor OS=Cucumis sativus OX=3659 GN=Gl PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 52  RISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 111
           ++SGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD
Sbjct: 32  QVSGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 91

Query: 112 PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 171
           PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM
Sbjct: 92  PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 151

Query: 172 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTP 231
           KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TP
Sbjct: 152 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTP 211

Query: 232 PEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           PEQCNYVFNTE+YNPMSP FWGSLPSSYHPQ
Sbjct: 212 PEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 242

[Close]

BLAST of Clc10G19030 vs. ExPASy TrEMBL
Match: A0A1S3B6J1 (homeobox-leucine zipper protein ATHB-22-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486558 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 52  RISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 111
           ++SGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD
Sbjct: 32  QVSGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 91

Query: 112 PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 171
           PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM
Sbjct: 92  PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 151

Query: 172 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTP 231
           KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TP
Sbjct: 152 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTP 211

Query: 232 PEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           PEQCNYVFNTE+YNPMSP FWGSLPSSYHPQ
Sbjct: 212 PEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 242

[Close]

BLAST of Clc10G19030 vs. ExPASy TrEMBL
Match: A0A0A0LED8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.3e-107
Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 52  RISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 111
           +  GVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD
Sbjct: 30  QFQGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 89

Query: 112 PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 171
           PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM
Sbjct: 90  PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 149

Query: 172 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTP 231
           KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TP
Sbjct: 150 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTP 209

Query: 232 PEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           PEQCNYVFNTE+YNPMSP FWGSLPSSYHPQ
Sbjct: 210 PEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

[Close]

BLAST of Clc10G19030 vs. ExPASy TrEMBL
Match: A0A1S3B777 (homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486558 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.3e-107
Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 52  RISGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 111
           +  GVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD
Sbjct: 30  QFQGVDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLD 89

Query: 112 PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 171
           PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM
Sbjct: 90  PDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVM 149

Query: 172 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTP 231
           KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TP
Sbjct: 150 KLKSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTP 209

Query: 232 PEQCNYVFNTEDYNPMSPTFWGSLPSSYHPQ 263
           PEQCNYVFNTE+YNPMSP FWGSLPSSYHPQ
Sbjct: 210 PEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

[Close]

BLAST of Clc10G19030 vs. ExPASy TrEMBL
Match: A0A5A7TRA5 (Homeobox-leucine zipper protein ATHB-22-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002760 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.4e-102
Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 63  MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL 122
           MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL
Sbjct: 1   MAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL 60

Query: 123 GLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQA 182
           GLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQA
Sbjct: 61  GLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQA 120

Query: 183 ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYPTPPEQCNYVFNTE 242
           ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHY TPPEQCNYVFNTE
Sbjct: 121 ARNQVSTVYTDLSGEETVESTSVGAGCSSKPRPVAAAAAVAAANHYTTPPEQCNYVFNTE 180

Query: 243 DYNPMSPTFWGSLPSSYHPQ 263
           +YNPMSP FWGSLPSSYHPQ
Sbjct: 181 EYNPMSPAFWGSLPSSYHPQ 200

[Close]

BLAST of Clc10G19030 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 )

HSP 1 Score: 148.7 bits (374), Expect = 6.7e-36
Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 0


Query: 81  NSYGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARW 140
           N+   + KKKRL+S QL SLERSFQEEIKLD DRK KLS+ELGLQPRQIAVWFQNRRARW
Sbjct: 70  NNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARW 129

Query: 141 KAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEE-T 200
           KAKQLE LYD+L+QE+D +SREK  L +EV KL+++LR+    + Q+S     +SGEE T
Sbjct: 130 KAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEEDT 189

Query: 201 VESTSV 206
           VE +SV
Sbjct: 190 VEISSV 195

[Close]

BLAST of Clc10G19030 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 )

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-33
Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 63  MAGASETVLQGLVP--------GMDMNSY-GNLEKKKRLSSEQLESLERSFQEEI----- 122
           M GA + +L   VP        G + NS+ G  +KKK+++SEQL+ LERSFQEEI     
Sbjct: 39  MMGAQQDILH--VPLAMVESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPD 98

Query: 123 ---KLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHK 180
              KL+PDRK KLSKELGLQPRQIAVWFQNR+ARWK KQLEHLY++L+QEFD +SREK  
Sbjct: 99  RKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKEL 158

[Close]

BLAST of Clc10G19030 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-22
Identity = 61/127 (48.03%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 84  GNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAK 143
           G  EKK+RLS  Q+++LE++F+ E KL+P+RK KL++ELGLQPRQ+AVWFQNRRARWK K
Sbjct: 58  GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 117

Query: 144 QLEH-------LYDTLKQEFDAISREKHKLQEEVMKLKSML-----RELQAARNQVSTVY 199
           QLE         YD+L+  FD++ R+   L +E+ KLK+ L      E +   N   T  
Sbjct: 118 QLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTE 177

[Close]

BLAST of Clc10G19030 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-22
Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 87  EKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 146
           EKK+RL+ EQ+++LE++F+   KL+P+RK +L++ LGLQPRQIA+WFQNRRARWK KQLE
Sbjct: 84  EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLE 143

Query: 147 HLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGE 198
             YDTLK++FD +  E   LQ    KL++   E+   +N+  T   +L+ E
Sbjct: 144 KDYDTLKRQFDTLKAENDLLQTHNQKLQA---EIMGLKNREQTESINLNKE 191

[Close]

BLAST of Clc10G19030 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 102.4 bits (254), Expect = 5.5e-22
Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 0


Query: 87  EKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 146
           EKK+RL  EQ+++LE++F+ + KL+P+RK KL++ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 71  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130

Query: 147 HLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEETVESTSVG 206
             Y  LK  FDA+ R +  LQ +   L   ++EL+A  N        + G + +E     
Sbjct: 131 RDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLN--------VEGVKGIEENGAL 190

Query: 207 AGCSSKPRPVAAAAAVAAANHYPTPP 233
               +    +A    +  ++  P+PP
Sbjct: 191 KAVEANQSVMANNEVLELSHRSPSPP 208

The following BLAST results are available for this feature:

BLAST of Clc10G19030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442780.1	2.3e-107	97.63	PREDICTED: homeobox-leucine zipper protein ATHB-22-like isoform X1 [Cucumis melo...	[more]
XP_004138002.1	1.5e-106	97.16	homeobox-leucine zipper protein ATHB-22 isoform X2 [Cucumis sativus] >XP_0084427...	[more]
XP_038905425.1	3.4e-106	98.56	homeobox-leucine zipper protein ATHB-22-like [Benincasa hispida]	[more]
KAG7017408.1	1.7e-102	94.23	putative homeobox-leucine zipper protein ATHB-51 [Cucurbita argyrosperma subsp. ...	[more]
KAA0043935.1	1.1e-101	98.50	homeobox-leucine zipper protein ATHB-22-like isoform X1 [Cucumis melo var. makuw...	[more]

BLAST of Clc10G19030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZR0	9.4e-35	65.87	Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702...	[more]
Q4PSR7	4.4e-32	61.19	Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH37	1.4e-22	42.86	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q6K498	1.4e-22	42.86	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A2X980	3.1e-22	45.07	Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Clc10G19030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A097A1J6	1.1e-107	97.63	Multicellular trichome development class I homeodomain-leucine zipper transcript...	[more]
A0A1S3B6J1	1.1e-107	97.63	homeobox-leucine zipper protein ATHB-22-like isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0LED8	7.3e-107	97.16	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE...	[more]
A0A1S3B777	7.3e-107	97.16	homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7TRA5	5.4e-102	98.50	Homeobox-leucine zipper protein ATHB-22-like isoform X1 OS=Cucumis melo var. mak...	[more]

BLAST of Clc10G19030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03790.1	6.7e-36	65.87	homeobox 51	[more]
AT2G36610.1	3.1e-33	61.19	homeobox protein 22	[more]
AT2G22430.1	1.1e-22	48.03	homeobox protein 6	[more]
AT1G69780.1	2.5e-22	50.45	Homeobox-leucine zipper protein family	[more]
AT5G65310.1	5.5e-22	41.10	homeobox protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..103
None	No IPR available	COILS	Coil	Coil	coord: 135..186
None	No IPR available	GENE3D	1.10.10.60		coord: 87..147 e-value: 3.9E-20 score: 73.2
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 53..245
None	No IPR available	PANTHER	PTHR24326:SF556	HOMEOBOX LEUCINE ZIPPER PROTEIN	coord: 53..245
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 114..123 score: 38.74 coord: 123..139 score: 55.68
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 85..147 e-value: 1.6E-17 score: 74.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 88..141 e-value: 2.2E-17 score: 62.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 83..143 score: 17.167442
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 88..144 e-value: 1.95399E-16 score: 69.5796
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 143..177 e-value: 1.1E-8 score: 35.1
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 118..141
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 77..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G19030.2	Clc10G19030.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding