Clc10G17890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G17890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein YLS9
Location	ClcChr10: 31789716 .. 31790471 (+)
RNA-Seq Expression	Clc10G17890
Synteny	Clc10G17890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGACGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAATTCAAGAATTTCCAGTCGCTTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTACCTCGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTCCAATCACTGGGAAGGTCAACTTCAGCGCAATCTCCGGCGAGAAGAACAGTTTTTTTCTTGTGGTTTTGAAACGATCAAGACGCGAGAGGAGGCGAAAGGTCGCCCACGACAACGAAGACGAATATTACCTCTCGTCGGCGACGAAGACGAAAACAAAGACGAGTCAATCAAAGAAGAATCCACCGGAGAATGTGATGCTGTTGAGACGAAACACCGGCATCGAAAAGGAATTGCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGAATTCGGAAGCTGCAGTCGGAGAAGGAGAAGTACTTAATGAGCATACGGCTAAACAATCTGACGATGGGAGGAGGCGGAGATGGCGGCCGGAACGGTTCTGCGAGATCGGAAACGACAGTCTGCCGTGATTGCCTGAGTGCGAAAGAAACCGGGATGGCGGCCGGATTTCACTGCTGCGCCAACGACGCCGTGACGGCCGGATTCCGATCACACGCGGGTCCGATAGCCCGACCCGTAAAAGAATCCGATTAA

mRNA sequence

ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGACGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAATTCAAGAATTTCCAGTCGCTTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTACCTCGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTCCAATCACTGGGAAGGTCAACTTCAGCGCAATCTCCGGCGAGAAGAACAGTTTTTTTCTTGTGGTTTTGAAACGATCAAGACGCGAGAGGAGGCGAAAGGTCGCCCACGACAACGAAGACGAATATTACCTCTCGTCGGCGACGAAGACGAAAACAAAGACGAGTCAATCAAAGAAGAATCCACCGGAGAATGTGATGCTGTTGAGACGAAACACCGGCATCGAAAAGGAATTGCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGAATTCGGAAGCTGCAGTCGGAGAAGGAGAAGTACTTAATGAGCATACGGCTAAACAATCTGACGATGGGAGGAGGCGGAGATGGCGGCCGGAACGGTTCTGCGAGATCGGAAACGACAGTCTGCCGTGATTGCCTGAGTGCGAAAGAAACCGGGATGGCGGCCGGATTTCACTGCTGCGCCAACGACGCCGTGACGGCCGGATTCCGATCACACGCGGGTCCGATAGCCCGACCCGTAAAAGAATCCGATTAA

Coding sequence (CDS)

ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGACGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAATTCAAGAATTTCCAGTCGCTTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTACCTCGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTCCAATCACTGGGAAGGTCAACTTCAGCGCAATCTCCGGCGAGAAGAACAGTTTTTTTCTTGTGGTTTTGAAACGATCAAGACGCGAGAGGAGGCGAAAGGTCGCCCACGACAACGAAGACGAATATTACCTCTCGTCGGCGACGAAGACGAAAACAAAGACGAGTCAATCAAAGAAGAATCCACCGGAGAATGTGATGCTGTTGAGACGAAACACCGGCATCGAAAAGGAATTGCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGAATTCGGAAGCTGCAGTCGGAGAAGGAGAAGTACTTAATGAGCATACGGCTAAACAATCTGACGATGGGAGGAGGCGGAGATGGCGGCCGGAACGGTTCTGCGAGATCGGAAACGACAGTCTGCCGTGATTGCCTGAGTGCGAAAGAAACCGGGATGGCGGCCGGATTTCACTGCTGCGCCAACGACGCCGTGACGGCCGGATTCCGATCACACGCGGGTCCGATAGCCCGACCCGTAAAAGAATCCGATTAA

Protein sequence

MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

Homology

[Close]

BLAST of Clc10G17890 vs. NCBI nr
Match: XP_031739121.1 (uncharacterized protein LOC116402855 [Cucumis sativus] >KGN59202.1 hypothetical protein Csa_000824 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 222/252 (88.10%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           ISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSRRERRRKV HDNE++YY SSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTKTKTS-QSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKT+TKT+   KKNPPENVMLLRRN GIE ELL+GFISPVMDRYEYE+RIRKLQ EKEKY
Sbjct: 121 TKTQTKTNLLKKKNPPENVMLLRRNGGIENELLAGFISPVMDRYEYEDRIRKLQLEKEKY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
           LMSI+++NL MG GGDGGRN S RSE  +C DCLSAKE G+AAGFHCCANDAVTAGFRSH
Sbjct: 181 LMSIQMSNLRMGDGGDGGRNKSGRSERRICGDCLSAKERGVAAGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESD 252
           AGPIARPVKES+
Sbjct: 241 AGPIARPVKESE 252

[Close]

BLAST of Clc10G17890 vs. NCBI nr
Match: KAA0043818.1 (protein YLS9 [Cucumis melo var. makuwa] >TYK25314.1 protein YLS9 [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 5.9e-116
Identity = 219/250 (87.60%), Postives = 235/250 (94.00%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           MA+TVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MADTVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           ISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSRRERRRKV HDNE++YY SSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKT+TKT+Q  KKNPPENVMLLRRN GIE ELLSGF+SPVMDRYEYEERIRKLQ E+EKY
Sbjct: 121 TKTQTKTNQPKKKNPPENVMLLRRNGGIENELLSGFVSPVMDRYEYEERIRKLQLEREKY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
           L+S+++NNLTM GGGDGGRN S RSET +CRDC+SAKE G+AAGFHCCANDAVTAGFRS 
Sbjct: 181 LISLQINNLTMRGGGDGGRNNSGRSETRICRDCVSAKERGVAAGFHCCANDAVTAGFRSL 240

Query: 241 AGPIARPVKE 250
           AGPIARPV++
Sbjct: 241 AGPIARPVEK 250

[Close]

BLAST of Clc10G17890 vs. NCBI nr
Match: KAG6580743.1 (hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401.4 bits (1030), Expect = 5.9e-108
Identity = 208/252 (82.54%), Postives = 222/252 (88.10%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           M ET  GVSFPIVFHDGE+D  IGSVIVSSST+FKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGGVSFPIVFHDGEQDVPIGSVIVSSSTDFKNFQSDLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           ISLD STKIRRRIPITGKVNF AIS EKNSFFLVVLKRSRRERRRKV  +NEDEYYL SA
Sbjct: 61  ISLDFSTKIRRRIPITGKVNFGAISCEKNSFFLVVLKRSRRERRRKVTDNNEDEYYLPSA 120

Query: 121 TKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKTK KT+Q +KKNPPENVMLLRRN GIE ++LSGFISP MDRY+YEERIRKLQ E+E Y
Sbjct: 121 TKTKAKTNQPNKKNPPENVMLLRRNAGIENKMLSGFISPAMDRYDYEERIRKLQLERENY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
             S+ L NLT GG GDGG NGS +S+TT CRDCLSAKETG A GFHCCANDAVTAGFRSH
Sbjct: 181 STSVGLRNLTAGGDGDGGWNGSVKSKTTACRDCLSAKETGAAVGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESD 252
           AGPIARP+KES+
Sbjct: 241 AGPIARPIKESE 252

[Close]

BLAST of Clc10G17890 vs. NCBI nr
Match: KAG7017495.1 (hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.9 bits (1021), Expect = 6.5e-107
Identity = 206/252 (81.75%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           M ET  GVSFPIVFHDGE+D  IGSVIVSSST+FKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGGVSFPIVFHDGEQDVPIGSVIVSSSTDFKNFQSDLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           ISLD STKIRRRIPITGKVNF AIS EKNSFFLVVLKRSRRERRRKV  +NEDEYYL SA
Sbjct: 61  ISLDFSTKIRRRIPITGKVNFGAISCEKNSFFLVVLKRSRRERRRKVTDNNEDEYYLPSA 120

Query: 121 TKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKTK KT+Q +KKNPPENVMLLRRN GIE ++LSGFISP MDRY+YEERIRKLQ E+E Y
Sbjct: 121 TKTKAKTNQPNKKNPPENVMLLRRNAGIENKMLSGFISPAMDRYDYEERIRKLQLERENY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
             S+ + NLT GG GDG  NGS +S+TT CRDCLSAKETG A GFHCCANDAVTAGFRSH
Sbjct: 181 STSVGVRNLTAGGDGDGSWNGSVKSKTTACRDCLSAKETGAAVGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESD 252
           AGPIARP+KES+
Sbjct: 241 AGPIARPIKESE 252

[Close]

BLAST of Clc10G17890 vs. NCBI nr
Match: KAG6596614.1 (hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 359.0 bits (920), Expect = 3.3e-95
Identity = 190/252 (75.40%), Postives = 214/252 (84.92%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS+LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           IS+DS+ KIRRRIPITGKVNF AI+ EKN FFLVVLKRSRRERRRK+   NEDEY +SSA
Sbjct: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKI-QGNEDEYDISSA 120

Query: 121 TKTKTKTSQS-KKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKT TKT+ S KKNP ENVMLL+RNTGIE ELL GFISP  +R+EY++R  KLQ E EKY
Sbjct: 121 TKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
           L++I   NL +GGG  G +NG+ R +T VC DCL+AKETG+AAGFHCCA+DAVT GFRSH
Sbjct: 181 LINIGQRNLALGGG--GVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSH 240

Query: 241 AGPIARPVKESD 252
           AGPIARPVKESD
Sbjct: 241 AGPIARPVKESD 249

[Close]

BLAST of Clc10G17890 vs. ExPASy TrEMBL
Match: A0A0A0LER6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780540 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 222/252 (88.10%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           ISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSRRERRRKV HDNE++YY SSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTKTKTS-QSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKT+TKT+   KKNPPENVMLLRRN GIE ELL+GFISPVMDRYEYE+RIRKLQ EKEKY
Sbjct: 121 TKTQTKTNLLKKKNPPENVMLLRRNGGIENELLAGFISPVMDRYEYEDRIRKLQLEKEKY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
           LMSI+++NL MG GGDGGRN S RSE  +C DCLSAKE G+AAGFHCCANDAVTAGFRSH
Sbjct: 181 LMSIQMSNLRMGDGGDGGRNKSGRSERRICGDCLSAKERGVAAGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESD 252
           AGPIARPVKES+
Sbjct: 241 AGPIARPVKESE 252

[Close]

BLAST of Clc10G17890 vs. ExPASy TrEMBL
Match: A0A5A7TLT1 (Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.8e-116
Identity = 219/250 (87.60%), Postives = 235/250 (94.00%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           MA+TVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MADTVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHDNEDEYYLSSA 120
           ISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSRRERRRKV HDNE++YY SSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
           TKT+TKT+Q  KKNPPENVMLLRRN GIE ELLSGF+SPVMDRYEYEERIRKLQ E+EKY
Sbjct: 121 TKTQTKTNQPKKKNPPENVMLLRRNGGIENELLSGFVSPVMDRYEYEERIRKLQLEREKY 180

Query: 181 LMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSH 240
           L+S+++NNLTM GGGDGGRN S RSET +CRDC+SAKE G+AAGFHCCANDAVTAGFRS 
Sbjct: 181 LISLQINNLTMRGGGDGGRNNSGRSETRICRDCVSAKERGVAAGFHCCANDAVTAGFRSL 240

Query: 241 AGPIARPVKE 250
           AGPIARPV++
Sbjct: 241 AGPIARPVEK 250

[Close]

BLAST of Clc10G17890 vs. ExPASy TrEMBL
Match: A0A6P9E6Z6 (uncharacterized protein LOC118347905 OS=Juglans regia OX=51240 GN=LOC118347905 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 132/258 (51.16%), Postives = 176/258 (68.22%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           M    +GVSFP+VF DGER+T+IG V+V  S  FKNFQS+LS+ IGIS HQF+VYLA   
Sbjct: 8   MVGIADGVSFPVVFFDGERETSIGDVVVHPSLGFKNFQSILSRKIGISPHQFSVYLA--- 67

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHD-NEDEYYLSS 120
             +   ++  R+IPITGKVNF+AIS EK+ FFLV+LKRSRRER+R+   +  E+EYY SS
Sbjct: 68  --VKYRSETLRKIPITGKVNFAAISREKDCFFLVILKRSRRERKRRTRKEFQEEEYYASS 127

Query: 121 ATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
            +  + +     K  P NVMLLRR+ G E +   G++SP++DR  YE+R+++LQ E+E+Y
Sbjct: 128 MSVVQRR----NKKVPVNVMLLRRDAGTEGQAFPGYVSPIVDRDGYEKRVKELQMERERY 187

Query: 181 LMSIRLNNLTM-----GGGGDGG--RNGSARSETTVCRDCLSAKETGMAAGFHCCANDAV 240
           L+++ L+ L++     GG G+ G  RNG    E   C +C+ AK+ G   GFH C  D V
Sbjct: 188 LINMGLSGLSLEKEDNGGVGERGVARNGVVDVE---CEECMRAKQIGDEVGFHGCVYDTV 247

Query: 241 TAGFRSHAGPIARPVKES 251
           T GFRS AGPIARPVK S
Sbjct: 248 TVGFRSPAGPIARPVKGS 253

[Close]

BLAST of Clc10G17890 vs. ExPASy TrEMBL
Match: A0A6A1UKZ8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004710 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 131/254 (51.57%), Postives = 166/254 (65.35%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           M E   GVSFP+VF DGER++NIG+V+VS S +FK+FQS++S+ IGIS HQF+VYLA   
Sbjct: 1   MVEIASGVSFPVVFFDGERESNIGNVLVSPSLQFKSFQSIMSRKIGISPHQFSVYLA--- 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRER-RRKVAHDNEDEYYLSS 120
             +   ++  R+IPITGK NF  I  +K+ FFLVVLKRSRRER RR      ED+YY SS
Sbjct: 61  --VKHRSETLRKIPITGKFNFGTIFRDKDCFFLVVLKRSRRERKRRNQRASQEDKYYASS 120

Query: 121 ATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKY 180
                    Q     PENVMLLRRN  I  +   GF SP++DR  YE+R+R+LQ E+E+Y
Sbjct: 121 -----MNVVQRLNKIPENVMLLRRNDAIGSQGFPGFASPIVDRAGYEKRVRELQMERERY 180

Query: 181 LMSIRLNNLTMGGGGDGG--RNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFR 240
           L ++ L  L +G   +GG   N   R+    C +C+ AK  G   GFH C  DAVT+GFR
Sbjct: 181 LTNMGLRGLCLGKEDNGGVDENVVTRNGVVECEECMRAKAIGTEVGFHWCVYDAVTSGFR 240

Query: 241 SHAGPIARPVKESD 252
           S AGPIARPVK S+
Sbjct: 241 SPAGPIARPVKGSN 244

[Close]

BLAST of Clc10G17890 vs. ExPASy TrEMBL
Match: A0A5N6RSG5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020025 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-51
Identity = 127/259 (49.03%), Postives = 170/259 (65.64%), Query Frame = 0


Query: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYK 60
           M +   GVS P+VF DGER+T+IG+V+V  S EFK FQS++S  IGIS  QF+ +LA   
Sbjct: 1   MMDIAGGVSVPVVFSDGERETDIGNVVVHPSLEFKTFQSIMSCKIGISPQQFSAFLA--- 60

Query: 61  ISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHD-NEDEYYLSS 120
                  + +R+IPIT K NF+A+S  ++ FFLVVLKRS+RERRR+   +  EDEYY S 
Sbjct: 61  -----GPETQRKIPITAKFNFAAVSPVEDCFFLVVLKRSKRERRRRTRREAREDEYYGSR 120

Query: 121 ATKTKTKTSQSKKNPPENVMLLRRNTGIEK---ELLSGFISPVMDRYEYEERIRKLQSEK 180
            +  +    ++ K  PENVMLLRRN GIE    +  SGF+S  MDR  YE R+++L++E+
Sbjct: 121 MSVVQ----RTIKKVPENVMLLRRNAGIESVQVQAFSGFVS-AMDRVGYENRVQELRAER 180

Query: 181 EKYLMSIRLNNLTMGGGGDG--GRNGSARSETTVCRDCLS--AKETGMAAGFHCCANDAV 240
           ++YLMS+ L+ L +G GG G     G  ++    C +CL   AK++G   GFH C  DAV
Sbjct: 181 DRYLMSMGLSGLYLGRGGKGDVAERGVTQNVVVECEECLGPRAKDSGREVGFHWCVYDAV 240

Query: 241 TAGFRSHAGPIARPVKESD 252
           T GFRS AGPIARPVK S+
Sbjct: 241 TFGFRSPAGPIARPVKGSE 246

The following BLAST results are available for this feature:

BLAST of Clc10G17890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739121.1	2.6e-116	88.10	uncharacterized protein LOC116402855 [Cucumis sativus] >KGN59202.1 hypothetical ...	[more]
KAA0043818.1	5.9e-116	87.60	protein YLS9 [Cucumis melo var. makuwa] >TYK25314.1 protein YLS9 [Cucumis melo v...	[more]
KAG6580743.1	5.9e-108	82.54	hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7017495.1	6.5e-107	81.75	hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6596614.1	3.3e-95	75.40	hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc10G17890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G17890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LER6	1.3e-116	88.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780540 PE=4 SV=1	[more]
A0A5A7TLT1	2.8e-116	87.60	Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 ...	[more]
A0A6P9E6Z6	1.1e-56	51.16	uncharacterized protein LOC118347905 OS=Juglans regia OX=51240 GN=LOC118347905 P...	[more]
A0A6A1UKZ8	2.5e-56	51.57	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004710 PE=4 SV=1	[more]
A0A5N6RSG5	1.9e-51	49.03	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020025 PE=4 SV=1	[more]

BLAST of Clc10G17890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..137
None	No IPR available	PANTHER	PTHR36351:SF1	EMBRYO SAC DEVELOPMENT ARREST 12	coord: 1..250
None	No IPR available	PANTHER	PTHR36351	EMBRYO SAC DEVELOPMENT ARREST 12	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G17890.1	Clc10G17890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane