Clc10G17060 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACATAACTAATAACTATTTAGATAATTTAAAGATAAGTATGTCATGTTAGTATTTTTCCAACGGAAATTCCCAAAGTTCCCCCATTAACAAGCCGTTGACAGTTCGAGAACGTAAAAGGCCGCGCGAAAGGTGAGAGTTTTGGCGAATGCTTCCAGTCCTCACCAGCTCTCTCTTCATTCTTCAATCCCCATTTCAGATTTTCGCTTTCTCCTTCTCCTACGGAATGATCAGAACTCACCGATTCAAGAAACTCGCCAAACCCAAAACCCCCATTTCTTCAACCGAGCTCCGCACTGAATCTCAAACAAGGAAGAAGAAGAAGAAAAAAACAGGGCATCTCCCCAAATCAAAGCCCGCGACCGACCCACAAACCCAAATCGCTCAATTCTCACCCTCACCCTCTTCCTCTTCCGAAGGATTGACCATCCTCCCCAAAGAGTTCTTTCTCGTTGACGCTTTGAACCTCGCCCCACGCTTGCTTGGAAAGCTCCTCAGGAGAGACGATGTCGTTCTTCGGATTACTGAGGTACTCATTGCTCCTTCTTTCTTGTATTTGTAAGTTCTGGCCGTATCGATTTTTTGTTTGATTTTGCTTATTGCGATTTGATTTTGGTTCTAAAAAGCTTATGGTGAAAAGGATTATGTTTGTTTGCATGCCAAGTCAATGAGAGAAATGCCCACAATCTGTTTGTATGTTTGTCTCTTTGAATACCAAGTCACTGTGAAGTCGATTTCTCTTCAATTTTACAAATGGGAGTTGGATTTTTTATGGTGATATTGTGATGATATCTTTGATTCGTGAAAAGTAGTTAATGGCTTATCGAGACTTGTGTTGGGTTTTGCCAAAATATTAGAATTGTAATTGTTCCATATTGGAAAAGTTCAAAGAAGTTATGGGCTCCAAGTACTTTAAAAGGAGCCTATGTCTTTGGTTTTAAATCGTCTCAATTAAAAACATTCTTAAGTTTGGGTGTGCTAACCCTAGTTAAATTCTCTTTTGTGTTATTTAATTCGAAAGTGAGATTATAGAGTGTGATTAGTATAAAAGCTTTGAGAGAGTGCTCTTGTAATTGAGATCAAGGAGAGAACTATTTTGTGTGATTGTAACAATTTTTCACACATTGGGTGTCTTTCTGGTGAGTCGTGGTTTTTCTCTGAGTTTGGAGTTTTTCACATAAATTCTTGTGTTTCCTAGTTTTATTATTTTCTTTTTAATTTCTCTATTATTTTCTGCTTATTCCTACGCTAGAAGTGGGAAGTTTTTCCCAACAACTCAACCATTAAACAAAAGAATTTTTTACAGGTAGAAGCTTACAGACCAAATGATTCTGCTTGTCATGGTCGGTTTGGTGTCACAGCAAGAACAGCCCCAGTAGTAAGTACTTCTCAACTCAACTGATTGCTGATGGGAAAATGAAGAATGGGAGATTTCTAATTCTTGTAGATGTTCTGATAACCAAGTTGTATGGACTTGTAGTTTGGACCTGGCGGGCATGCGTATGTTTATCTTTGCTATGGTCTCCATATGATGCTGAATGTTGTTGCGGATGAGGTCGGAGTTGGTGCTGCTGTGTTAATCAGATCTTGTGCTCCTGTCAGTGGTAAACTTTCTCGTCTTGCCTGTACCTTAATTCTTCTGAGCTAATCTTTGGTACAGTTTTTAAAAGCCGAGATTTGTATAATGTGTGTTTGGATTTATTAAAGAGCAGGTTATACAAACCTGAGCTTGTGTAATTTATCTTTTTTCTTTAGTTTGTGAGTTTATCATTTCTAAAAGTTGTACAAAAGTAAGTTTAATAAGTGATTTTCTATCACATGGGGTTGTGTAACCTTTGAGATTAGAAAACCGATAGCTTGGAATAAACTAACCCACCTATCGACCATCTAATAGATGTCAGTTTCTTAATTCAAGCTTACACAAACTAACCCATCAGCCAACCACCTCCAGATGTTTTCCCTTATGGTCTGGAGGCCACTGTTTAGTCAACACTCAAATGCAACTATTTTTTTTTTGGGTTGGCTAGAAAAGTTGAGTTTTGTAAAGGTCCATTTATGCTTCTTGGAGTTGGCTGTAAATGATGATCGTTTAGAATAAATGTATTGTCAGTTCGTTTGTCATAGTGTGAGAATACTTGAGTTGCCAAGGCTCTTTGATAATCATTTTACTTTTTAAAATTGTGCTTAATTTCTTTCAAATTCTTTACAATGTTTTCATCTTTATCTTTGTTGAGGAAACTTTTGAATTCATAGCCAAACTCTAGAAAAAAAAAACACACACACACACAAATTTTTAAGAACTACGTTGTTTTTAGTTTTCAAAAGGCTTGATTTTTGAAAACATCCATAAAAAGTTGATTACAAAATAAAAGGAATCTATAGGTAGAAGTAGTATCTATAAGCTTAAATTTAAACGACTAAAACCAAAAACTAAATAGTTATCGAACATGTCCTAAGATCTTCAATAGGATAGATTTTTTGATTTTATAATTGCGGGTCCAATAATTGTACATAAATTGGAAATCTTAACATCGGCTATTTCATACGTTAATGCATAGTGTTCTGAGGCCTAGAAGCACATAGCTTTCTTGATGCTTAGTTACCAAATAATCTTACTCAAATGACAAAGACTTGTTTTTATGGCTTGGCCATTTCTTTCTGTTTGTGAATGCATCGATCTTGATTGAGATTCAACTGGAAGGTCATATTCATTGCAACTCTCAGAAGGAAGAAACTCCTCATTGTAGGCTTTCATATTTAAGTTGTTAGATTAATGTAGATAATAAACAGGATTGGAGACGATTCAGAAGCGGAGAGGTCAGATCACAGACAAGCCTGTTCTACTTACAGGGCCCGGGAAGGTAAAAAAATGATCTCTATTATAAACATTGCTTCTTGGAGGCTGACTCTGTAGAATTCATATAAGATTTTGTTTGTTTCTCCTTTTTGGTAGTGAAACATTGTAACAGAAGAAATTATCAGAGTTGAAAATGGTTAAGAAGATGGCTCTGTAAAGTTAAAGTCATTTTGCACCTGAAATCACTATTTACCAAATTTATATCTTACTTTTCTCAAAGGTTGGTCAAGCGCTTGGATTATCAACAGAATGGTCTAACCATCCATTTTACGCTCCTGGTAACCGTCATTATACAACTTCTACCTGTAAGCCTATTGAAGAACTTGGTCGTAGGATTTATGTATGAATGTGTTTCAGGTGGTTTAGAACTCCTTGACGCTCCGGAGCCAGAGAACATCCTGGTAGGACCTCGTGTTGGTATCGAGTATGCCTTACCGGAGCATGTGAATGCTTTATGGAGATTTGCCATTGCAGGAACTCCATGGATAAGTGCTCCTAAGAACACTCTCAGGCCATCCTGATGGGAGGAGATGGTACAATTTGTTGTGCTTGGAATTATTTTGTATCACTGAAATTGGATTTGGGAAGGTTGTAAATGTTGTATAGTAGTTCAATGTAAACAGAACAACCTCATCTTTTGAATGGATTCATCTTCAGTTTGAATCTCCA TACATAACTAATAACTATTTAGATAATTTAAAGATAAGTATGTCATGTTAGTATTTTTCCAACGGAAATTCCCAAAGTTCCCCCATTAACAAGCCGTTGACAGTTCGAGAACGTAAAAGGCCGCGCGAAAGGTGAGAGTTTTGGCGAATGCTTCCAGTCCTCACCAGCTCTCTCTTCATTCTTCAATCCCCATTTCAGATTTTCGCTTTCTCCTTCTCCTACGGAATGATCAGAACTCACCGATTCAAGAAACTCGCCAAACCCAAAACCCCCATTTCTTCAACCGAGCTCCGCACTGAATCTCAAACAAGGAAGAAGAAGAAGAAAAAAACAGGGCATCTCCCCAAATCAAAGCCCGCGACCGACCCACAAACCCAAATCGCTCAATTCTCACCCTCACCCTCTTCCTCTTCCGAAGGATTGACCATCCTCCCCAAAGAGTTCTTTCTCGTTGACGCTTTGAACCTCGCCCCACGCTTGCTTGGAAAGCTCCTCAGGAGAGACGATGTCGTTCTTCGGATTACTGAGGTAGAAGCTTACAGACCAAATGATTCTGCTTGTCATGGTCGGTTTGGTGTCACAGCAAGAACAGCCCCAGTATTTGGACCTGGCGGGCATGCGTATGTTTATCTTTGCTATGGTCTCCATATGATGCTGAATGTTGTTGCGGATGAGGTCGGAGTTGGTGCTGCTGTGTTAATCAGATCTTGTGCTCCTGTCAGTGGATTGGAGACGATTCAGAAGCGGAGAGGTCAGATCACAGACAAGCCTGTTCTACTTACAGGGCCCGGGAAGGTTGGTCAAGCGCTTGGATTATCAACAGAATGGTCTAACCATCCATTTTACGCTCCTGGTGGTTTAGAACTCCTTGACGCTCCGGAGCCAGAGAACATCCTGGTAGGACCTCGTGTTGGTATCGAGTATGCCTTACCGGAGCATGTGAATGCTTTATGGAGATTTGCCATTGCAGGAACTCCATGGATAAGTGCTCCTAAGAACACTCTCAGGCCATCCTGATGGGAGGAGATGGTACAATTTGTTGTGCTTGGAATTATTTTGTATCACTGAAATTGGATTTGGGAAGGTTGTAAATGTTGTATAGTAGTTCAATGTAAACAGAACAACCTCATCTTTTGAATGGATTCATCTTCAGTTTGAATCTCCA ATGCTTCCAGTCCTCACCAGCTCTCTCTTCATTCTTCAATCCCCATTTCAGATTTTCGCTTTCTCCTTCTCCTACGGAATGATCAGAACTCACCGATTCAAGAAACTCGCCAAACCCAAAACCCCCATTTCTTCAACCGAGCTCCGCACTGAATCTCAAACAAGGAAGAAGAAGAAGAAAAAAACAGGGCATCTCCCCAAATCAAAGCCCGCGACCGACCCACAAACCCAAATCGCTCAATTCTCACCCTCACCCTCTTCCTCTTCCGAAGGATTGACCATCCTCCCCAAAGAGTTCTTTCTCGTTGACGCTTTGAACCTCGCCCCACGCTTGCTTGGAAAGCTCCTCAGGAGAGACGATGTCGTTCTTCGGATTACTGAGGTAGAAGCTTACAGACCAAATGATTCTGCTTGTCATGGTCGGTTTGGTGTCACAGCAAGAACAGCCCCAGTATTTGGACCTGGCGGGCATGCGTATGTTTATCTTTGCTATGGTCTCCATATGATGCTGAATGTTGTTGCGGATGAGGTCGGAGTTGGTGCTGCTGTGTTAATCAGATCTTGTGCTCCTGTCAGTGGATTGGAGACGATTCAGAAGCGGAGAGGTCAGATCACAGACAAGCCTGTTCTACTTACAGGGCCCGGGAAGGTTGGTCAAGCGCTTGGATTATCAACAGAATGGTCTAACCATCCATTTTACGCTCCTGGTGGTTTAGAACTCCTTGACGCTCCGGAGCCAGAGAACATCCTGGTAGGACCTCGTGTTGGTATCGAGTATGCCTTACCGGAGCATGTGAATGCTTTATGGAGATTTGCCATTGCAGGAACTCCATGGATAAGTGCTCCTAAGAACACTCTCAGGCCATCCTGA MLPVLTSSLFILQSPFQIFAFSFSYGMIRTHRFKKLAKPKTPISSTELRTESQTRKKKKKKTGHLPKSKPATDPQTQIAQFSPSPSSSSEGLTILPKEFFLVDALNLAPRLLGKLLRRDDVVLRITEVEAYRPNDSACHGRFGVTARTAPVFGPGGHAYVYLCYGLHMMLNVVADEVGVGAAVLIRSCAPVSGLETIQKRRGQITDKPVLLTGPGKVGQALGLSTEWSNHPFYAPGGLELLDAPEPENILVGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLRPS Homology
BLAST of Clc10G17060 vs. NCBI nr
Match: XP_038903265.1 (DNA-3-methyladenine glycosylase isoform X1 [Benincasa hispida]) HSP 1 Score: 522.7 bits (1345), Expect = 2.0e-144 Identity = 268/289 (92.73%), Postives = 272/289 (94.12%), Query Frame = 0
BLAST of Clc10G17060 vs. NCBI nr
Match: XP_008443030.1 (PREDICTED: DNA-3-methyladenine glycosylase [Cucumis melo] >KAA0043748.1 DNA-3-methyladenine glycosylase [Cucumis melo var. makuwa]) HSP 1 Score: 517.7 bits (1332), Expect = 6.5e-143 Identity = 258/282 (91.49%), Postives = 268/282 (95.04%), Query Frame = 0
BLAST of Clc10G17060 vs. NCBI nr
Match: XP_022983051.1 (DNA-3-methyladenine glycosylase [Cucurbita maxima]) HSP 1 Score: 504.2 bits (1297), Expect = 7.4e-139 Identity = 258/287 (89.90%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Clc10G17060 vs. NCBI nr
Match: XP_023527732.1 (DNA-3-methyladenine glycosylase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 498.0 bits (1281), Expect = 5.3e-137 Identity = 256/287 (89.20%), Postives = 263/287 (91.64%), Query Frame = 0
BLAST of Clc10G17060 vs. NCBI nr
Match: XP_004136560.1 (DNA-3-methyladenine glycosylase isoform X1 [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 4.5e-136 Identity = 250/281 (88.97%), Postives = 262/281 (93.24%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy Swiss-Prot
Match: Q39147 (DNA-3-methyladenine glycosylase OS=Arabidopsis thaliana OX=3702 GN=MAG PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.2e-93 Identity = 174/257 (67.70%), Postives = 205/257 (79.77%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy Swiss-Prot
Match: Q3JEY0 (Putative 3-methyladenine DNA glycosylase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=Noc_0079 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 4.0e-55 Identity = 112/197 (56.85%), Postives = 137/197 (69.54%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy Swiss-Prot
Match: Q2Y9K4 (Putative 3-methyladenine DNA glycosylase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=Nmul_A1264 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-29 Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy Swiss-Prot
Match: Q8KBD5 (Putative 3-methyladenine DNA glycosylase OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=CT1853 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.8e-29 Identity = 78/194 (40.21%), Postives = 110/194 (56.70%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy Swiss-Prot
Match: Q2IW19 (Putative 3-methyladenine DNA glycosylase OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=RPB_2889 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.0e-29 Identity = 78/188 (41.49%), Postives = 104/188 (55.32%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy TrEMBL
Match: A0A5A7TLM4 (3-methyladenine DNA glycosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00770 PE=3 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 3.1e-143 Identity = 258/282 (91.49%), Postives = 268/282 (95.04%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy TrEMBL
Match: A0A1S3B6L3 (3-methyladenine DNA glycosidase OS=Cucumis melo OX=3656 GN=LOC103486748 PE=3 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 3.1e-143 Identity = 258/282 (91.49%), Postives = 268/282 (95.04%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy TrEMBL
Match: A0A6J1J112 (3-methyladenine DNA glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111481712 PE=3 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 3.6e-139 Identity = 258/287 (89.90%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy TrEMBL
Match: A0A0A0LED6 (3-methyladenine DNA glycosidase OS=Cucumis sativus OX=3659 GN=Csa_3G800670 PE=3 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 2.2e-136 Identity = 250/281 (88.97%), Postives = 262/281 (93.24%), Query Frame = 0
BLAST of Clc10G17060 vs. ExPASy TrEMBL
Match: A0A6J1DAY6 (3-methyladenine DNA glycosidase OS=Momordica charantia OX=3673 GN=LOC111019322 PE=3 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116 Identity = 226/276 (81.88%), Postives = 236/276 (85.51%), Query Frame = 0
BLAST of Clc10G17060 vs. TAIR 10
Match: AT3G12040.1 (DNA-3-methyladenine glycosylase (MAG) ) HSP 1 Score: 343.6 bits (880), Expect = 1.6e-94 Identity = 174/257 (67.70%), Postives = 205/257 (79.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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