Clc10G15090 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGACAAAGACATGGATTCTTAAAGTCATATTTAAAATGAAAACATCCCACTCTTTAAATTTAACTTTTCATATATTTTATATATTGAGAGAGTATTACCGTTTCTTCCCACGAAAATAATAAAAATGAAAAAGAAAAATAAAAGTTTAGAAAGGAAGTTTCCGGGAAGGTGCATAAGGGATAGTACAATTTCAGAGTTCTCCTTCCTTCTCTCCCACCATTTAACCCCCTTCACATTCTTCACGCTAATTGCCTCAATTTCCAAATCCCAAATCAAATTCTAATTCAAATTCTCCACATTCTTCATTTCAATTCAATTCAATTCCCAAAATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCTCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGGGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGGTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGAACTCAATCAACCCCTTTCATTTTTTTCTTTTTTATTTTAATTATTATTAATAATAATTATATATATAAATATATATATATATATATATATATATATATAAAAGGATCTTTGTGTTTGCGTTGGTTGTTGCAAAGTATATAAAAACGGCAGTAAGTCGT GCGACAAAGACATGGATTCTTAAAGTCATATTTAAAATGAAAACATCCCACTCTTTAAATTTAACTTTTCATATATTTTATATATTGAGAGAGTATTACCGTTTCTTCCCACGAAAATAATAAAAATGAAAAAGAAAAATAAAAGTTTAGAAAGGAAGTTTCCGGGAAGGTGCATAAGGGATAGTACAATTTCAGAGTTCTCCTTCCTTCTCTCCCACCATTTAACCCCCTTCACATTCTTCACGCTAATTGCCTCAATTTCCAAATCCCAAATCAAATTCTAATTCAAATTCTCCACATTCTTCATTTCAATTCAATTCAATTCCCAAAATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCTCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGGGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGGTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGAACTCAATCAACCCCTTTCATTTTTTTCTTTTTTATTTTAATTATTATTAATAATAATTATATATATAAATATATATATATATATATATATATATATATAAAAGGATCTTTGTGTTTGCGTTGGTTGTTGCAAAGTATATAAAAACGGCAGTAAGTCGT ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCTCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGGGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGGTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA MKLLKSFNPNRLFSSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSGVWSDFSDSTLSLKELEALLGLIGAEPPSEEELKIMMGEMDRVGPACHSELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR Homology
BLAST of Clc10G15090 vs. NCBI nr
Match: XP_038903370.1 (probable calcium-binding protein CML36 [Benincasa hispida]) HSP 1 Score: 304.3 bits (778), Expect = 6.4e-79 Identity = 158/165 (95.76%), Postives = 159/165 (96.36%), Query Frame = 0
BLAST of Clc10G15090 vs. NCBI nr
Match: XP_008443339.2 (PREDICTED: probable calcium-binding protein CML35 [Cucumis melo] >KAA0053814.1 putative calcium-binding protein CML35 [Cucumis melo var. makuwa] >TYK25587.1 putative calcium-binding protein CML35 [Cucumis melo var. makuwa]) HSP 1 Score: 290.8 bits (743), Expect = 7.3e-75 Identity = 154/169 (91.12%), Postives = 158/169 (93.49%), Query Frame = 0
BLAST of Clc10G15090 vs. NCBI nr
Match: XP_004136671.2 (probable calcium-binding protein CML35 [Cucumis sativus] >KGN59507.1 hypothetical protein Csa_001340 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72 Identity = 149/168 (88.69%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of Clc10G15090 vs. NCBI nr
Match: XP_022983878.1 (probable calcium-binding protein CML36 [Cucurbita maxima]) HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60 Identity = 131/169 (77.51%), Postives = 144/169 (85.21%), Query Frame = 0
BLAST of Clc10G15090 vs. NCBI nr
Match: KAG6580931.1 (putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017674.1 putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60 Identity = 132/169 (78.11%), Postives = 144/169 (85.21%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy Swiss-Prot
Match: Q9SS31 (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.5e-30 Identity = 98/212 (46.23%), Postives = 124/212 (58.49%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy Swiss-Prot
Match: P30188 (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 6.3e-29 Identity = 93/210 (44.29%), Postives = 114/210 (54.29%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.0e-15 Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.8e-14 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy Swiss-Prot
Match: Q5ZCK5 (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 GN=CML16 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.7e-13 Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy TrEMBL
Match: A0A5A7UEZ0 (Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007460 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.6e-75 Identity = 154/169 (91.12%), Postives = 158/169 (93.49%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy TrEMBL
Match: A0A1S3B7R8 (probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.6e-75 Identity = 154/169 (91.12%), Postives = 158/169 (93.49%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy TrEMBL
Match: A0A0A0LFY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823060 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.3e-72 Identity = 149/168 (88.69%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy TrEMBL
Match: A0A6J1J8Y7 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111482360 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 6.5e-61 Identity = 131/169 (77.51%), Postives = 144/169 (85.21%), Query Frame = 0
BLAST of Clc10G15090 vs. ExPASy TrEMBL
Match: A0A6J1FB49 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111442449 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61 Identity = 132/169 (78.11%), Postives = 144/169 (85.21%), Query Frame = 0
BLAST of Clc10G15090 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 131.7 bits (330), Expect = 5.3e-31 Identity = 98/212 (46.23%), Postives = 124/212 (58.49%), Query Frame = 0
BLAST of Clc10G15090 vs. TAIR 10
Match: AT2G41410.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 128.6 bits (322), Expect = 4.5e-30 Identity = 93/210 (44.29%), Postives = 114/210 (54.29%), Query Frame = 0
BLAST of Clc10G15090 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family ) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16 Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 0
BLAST of Clc10G15090 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 ) HSP 1 Score: 79.0 bits (193), Expect = 4.1e-15 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Clc10G15090 vs. TAIR 10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 67.8 bits (164), Expect = 9.4e-12 Identity = 59/172 (34.30%), Postives = 84/172 (48.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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