Clc10G14930 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G14930
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Phytocyanin domain-containing protein
Location	ClcChr10: 28568543 .. 28570641 (+)
RNA-Seq Expression	Clc10G14930
Synteny	Clc10G14930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACATGAGCTGGCTGTCGCGAGAAAAATCCCAACTTTTGAACACAATTTGTTTAATTATCAATCCAAAAATTAAAAGAAAAAAGAAAGGCTGAGGTGTAATAATTTGTACTAACCCATAAGTTAAGTCGAATTAAAAAAATTAATGGAAGTTGTAGATCCATAAAGCAACCTCTTTTCGATCTTTATAAACCTTACTTCCCACCCCAGACCCTTCTAGACAACACTCAAATACAGGGCCAATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTGTAAGCATTTCTATCTATAGATCTGTGAGTGGTGTTTAAAGTTATAGCTGATTTTCAGATCTTATGTGGTTTTTTAAACTCAGTAGTTGGTTTTAGGGGAGATTTTGATTTTGGGGTTTTGTAGGATTTGTTGGGGGTTTCATACTTTTAACTTGAAGTTTTTAGTTCTGTTTGTTGCTGCTGAGAAAATTGGTGGAGGAATTTGTCAAATGTGGGGGAAAATGGAGTTTCTATATGAGTTGTTTTGAATTGATTGTTTCCCAACTCAAGATAACTTCTTATATATATATGTTTGTGGGTGTGGATGCTCAGACATGAGAGGTTTCTCTGTTTATTTGAGGTTCTTATATTACCATATGAATGTGGATGGGTTAGAAACTTAGGATTGTTTGTGTTGTTATTTTTCTGATTGTTCCATGGGTTAGGAACATATAAATACAATGCAGTGACATTCTTTCAGCATGTTTTGTTGTTTGTTAGAGAAATTTTCTTGGAGGTCTTCTAACTTAGTCCAAATATGCCTAATTTTGAAGTTTCTAGCAAATGAGTTTAACTAACGAAAGTAGGAAGATGGGAGTGTGTATTTGTGAATGGCTCTGGCTTGTCTGTAACCAGAAAAACACACACAGGGTTCTTCTCCGAATCAACCAAAAATTCTTTTGGTTTTTCGTTGATGAAGAATGTTTGTTTGTTTTCCAAAATCCGTTTAGAGCTTAGGTCGAAGTAGAGCTTAGCTCTGGCTTGTATGTAACCAGAAAAGCACACACAATGTTCTTCTCCGAATCAATGAAAAACTCTTTCGATTTTTCATCGATGGAGAATGTTTGTTTGTTTTCAAATGATCGAAGAGCGATTTTGGCTCACTTCTTTCCTCTTGTTGTGTATTAGTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAGAGACCAGTTTTATTGATTCATATTCAATAGAGTACATTTTTCTTCACCAAATTGTGGAAGGAAGATCAAGTTATTAATTCTCTTCTTTCTTTTTTTGAGGGTGTTGTGCCTCTTTTGTGTTATCTTTTGCTTTCTCTTTGATTTAGACTTCAATATTCAAATTAGATTTTTTTTTTTCCAATTTATTTTGAAATTTGGCAGTTTTCTTATTTGGTTGGTGGATATAAAAATTGTAGGGATTGGATTCTGATAACACTTTTAATTTATTTTGTCCACTTAAATGGGTTTTGTAAGCAACCAACAAACCATGTGAATATAAGATTCTTGTGTCCCATTTTTTCATTAAATAAATAGGAAAGCAATTCGGACACAAAGATCATACCTGTAATGTTGTTTGGGCCCATTTTCCAGCACATTAAATCTGGCTTTTAC

mRNA sequence

CAAACATGAGCTGGCTGTCGCGAGAAAAATCCCAACTTTTGAACACAATTTGTTTAATTATCAATCCAAAAATTAAAAGAAAAAAGAAAGGCTGAGGTGTAATAATTTGTACTAACCCATAAGTTAAGTCGAATTAAAAAAATTAATGGAAGTTGTAGATCCATAAAGCAACCTCTTTTCGATCTTTATAAACCTTACTTCCCACCCCAGACCCTTCTAGACAACACTCAAATACAGGGCCAATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAGAGACCAGTTTTATTGATTCATATTCAATAGAGTACATTTTTCTTCACCAAATTGTGGAAGGAAGATCAAGTTATTAATTCTCTTCTTTCTTTTTTTGAGGGTGTTGTGCCTCTTTTGTGTTATCTTTTGCTTTCTCTTTGATTTAGACTTCAATATTCAAATTAGATTTTTTTTTTTCCAATTTATTTTGAAATTTGGCAGTTTTCTTATTTGGTTGGTGGATATAAAAATTGTAGGGATTGGATTCTGATAACACTTTTAATTTATTTTGTCCACTTAAATGGGTTTTGTAAGCAACCAACAAACCATGTGAATATAAGATTCTTGTGTCCCATTTTTTCATTAAATAAATAGGAAAGCAATTCGGACACAAAGATCATACCTGTAATGTTGTTTGGGCCCATTTTCCAGCACATTAAATCTGGCTTTTAC

Coding sequence (CDS)

ATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAG

Protein sequence

MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW

Homology

[Close]

BLAST of Clc10G14930 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88
Identity = 163/178 (91.57%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYD 60
           ME+L RRVDGG LLVA A+VVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQ KHFYYD
Sbjct: 1   MEVL-RRVDGGGLLVAVAVVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQDKHFYYD 60

Query: 61  DWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 120
           DWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC
Sbjct: 61  DWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 120

Query: 121 YGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           YGGMKLAIHVEHLPPPPS+S LNEKSSALRSTYI HTPF+LTAVFAI ALYEA A++W
Sbjct: 121 YGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYISHTPFILTAVFAITALYEAFARLW 177

[Close]

BLAST of Clc10G14930 vs. NCBI nr
Match: XP_008443359.1 (PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [Cucumis melo var. makuwa] >TYK25602.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 327.8 bits (839), Expect = 5.9e-86
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MEILRRRVDGGVLL--VAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV G  LL  VAAA+VVLLA+VPEVSATRWTVGGNMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           FCYGGMKLAIHVEHLPPPPSA  +NEKSSALRSTY GHTPFVLTAVFAIAA++EA ++VW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Clc10G14930 vs. NCBI nr
Match: XP_004136682.1 (lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 3.2e-84
Identity = 157/179 (87.71%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLVA-AALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYY 60
           ME+LR RV G  LLVA AA+V+LLAAVPEVSATRWTVGGNMGW TNVNYT WAQGKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           C+GGMKLAIHVEHLPPPPS+S LNEKSSALRST  GHTPFVLTAVFAIAA+ E   +VW
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]

BLAST of Clc10G14930 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 313.9 bits (803), Expect = 8.7e-82
Identity = 152/178 (85.39%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYD 60
           M++L  RV GGV L+ AA VV+L A+PEVSATRWTVGG MGWTTNVNYTIWA+GKHFYYD
Sbjct: 31  MQVLTTRV-GGVGLLVAAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYD 90

Query: 61  DWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 120
           DWLFFVYDRNQMNVLEVNKT+YENCNSD PLHNFTTGAGRDVVHLNVTRPYYFISGKGFC
Sbjct: 91  DWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 150

Query: 121 YGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           YGGMKLAIHV HLPPPPSAS  N KSSALRS+YIGHTPFVLTAVFAIAAL EA  + W
Sbjct: 151 YGGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRFW 207

[Close]

BLAST of Clc10G14930 vs. NCBI nr
Match: XP_023528207.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 2.8e-80
Identity = 150/179 (83.80%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLV-AAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYY 60
           M++LR RV G  LLV AAA  V+L A+PEVSATRWTVGG MGWTTNVNYT+WA+GKHFYY
Sbjct: 1   MQVLRTRVGGVWLLVAAAAAAVMLTAMPEVSATRWTVGGKMGWTTNVNYTMWAEGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKT+YENCNSD PLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           CYGGMKLAIHV HLPPPPSAS  N  SSALRS+YI HTPFVLTAVFAIAAL EA  + W
Sbjct: 121 CYGGMKLAIHVRHLPPPPSASPFNATSSALRSSYIAHTPFVLTAVFAIAALREAFCRFW 179

[Close]

BLAST of Clc10G14930 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 89/169 (52.66%), Postives = 121/169 (71.60%), Query Frame = 0


Query: 12  VLLVAAALVVLLAA-VPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 71
           VL+ A  L  L+AA +P V+A ++TVG N  W  N+NYTIWAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 72  QMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHV 131
           Q N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 132 EHLPPPPSASHLNEKSSALRSTYIGHTPFVL-TAVFAIAALYEALAQVW 179
           E LPPPP ++ +    S   S   G   F++  ++FA  A+++ ++++W
Sbjct: 126 EKLPPPPKSAPVKNIGSV--SMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]

BLAST of Clc10G14930 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.6e-15
Identity = 52/125 (41.60%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 15  VAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNV 74
           VAAAL++ LAAVP V A  + VG   GWT+N++YT+W  GK F   D L FVY  +  +V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SV 64

Query: 75  LEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHVEHL 134
             V+K  Y+NC+S     NF  G  +  + L      +F+    G C  GMKLA+ V   
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAA 124

Query: 135 PPPPS 139
            P PS
Sbjct: 125 APSPS 126

[Close]

BLAST of Clc10G14930 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 50/151 (33.11%), Postives = 71/151 (47.02%), Query Frame = 0


Query: 13  LLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQM 72
           L++   L ++  A+P + AT +TVG   GW    +Y+ WA  K F   D L F Y     
Sbjct: 7   LVLCFLLAIINMALPSL-ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAH 66

Query: 73  NVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVE 132
            V EV ++DY++C S + +   +TGA    + L     +YFI G  G   GGMKL+I V+
Sbjct: 67  TVDEVKESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 126

Query: 133 HLPPPPSASHLNEKSSALRSTYIGHTPFVLT 163
                 +A      SS   S     TP   T
Sbjct: 127 ASSGSSAAPSATPSSSGKGSPSSDDTPAATT 154

[Close]

BLAST of Clc10G14930 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 30  SATRWTVGGNMGWTTN--VNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNS 89
           +A ++ VGG+  W TN   NY  W+    F   D L+F Y +   +VLEVNK DY+ CN+
Sbjct: 27  NARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNT 86

Query: 90  DHPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVEHLPPPPSA 140
            +P+     G     + L+   P+YFISG +  C  G KL + V     P +A
Sbjct: 87  KNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTA 137

[Close]

BLAST of Clc10G14930 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-10
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 12  VLLVAAALVVLLAAVPEVSATRWTVGGNMG-W----TTNVNYTIWAQGKHFYYDDWLFFV 71
           V + +   +  LAA  EV     TVGG  G W    +++ ++T WAQ   F   D++ F 
Sbjct: 14  VAIFSLIFLFSLAAANEV-----TVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFR 73

Query: 72  YDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMK 131
           Y+  + +VLEV K  Y +CN+ +PL N+T G  +  V L+ + P+YFISG  G C  G K
Sbjct: 74  YESGKDSVLEVTKEAYNSCNTTNPLANYTDGETK--VKLDRSGPFYFISGANGHCEKGQK 131

[Close]

BLAST of Clc10G14930 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.8e-86
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MEILRRRVDGGVLL--VAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV G  LL  VAAA+VVLLA+VPEVSATRWTVGGNMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           FCYGGMKLAIHVEHLPPPPSA  +NEKSSALRSTY GHTPFVLTAVFAIAA++EA ++VW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Clc10G14930 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.8e-86
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MEILRRRVDGGVLL--VAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV G  LL  VAAA+VVLLA+VPEVSATRWTVGGNMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           FCYGGMKLAIHVEHLPPPPSA  +NEKSSALRSTY GHTPFVLTAVFAIAA++EA ++VW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Clc10G14930 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 157/179 (87.71%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLVA-AALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYY 60
           ME+LR RV G  LLVA AA+V+LLAAVPEVSATRWTVGGNMGW TNVNYT WAQGKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           C+GGMKLAIHVEHLPPPPS+S LNEKSSALRST  GHTPFVLTAVFAIAA+ E   +VW
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]

BLAST of Clc10G14930 vs. ExPASy TrEMBL
Match: A0A6J1F3N0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.2e-82
Identity = 152/178 (85.39%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYD 60
           M++L  RV GGV L+ AA VV+L A+PEVSATRWTVGG MGWTTNVNYTIWA+GKHFYYD
Sbjct: 31  MQVLTTRV-GGVGLLVAAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYD 90

Query: 61  DWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 120
           DWLFFVYDRNQMNVLEVNKT+YENCNSD PLHNFTTGAGRDVVHLNVTRPYYFISGKGFC
Sbjct: 91  DWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 150

Query: 121 YGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           YGGMKLAIHV HLPPPPSAS  N KSSALRS+YIGHTPFVLTAVFAIAAL EA  + W
Sbjct: 151 YGGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRFW 207

[Close]

BLAST of Clc10G14930 vs. ExPASy TrEMBL
Match: A0A6J1J8R9 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.8e-80
Identity = 150/178 (84.27%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 1   MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYD 60
           M++LR RV GGV L+ AA VV+L A+ EVSATRWTVGG MGWTTNVNYTIWA+GKHFYYD
Sbjct: 1   MQVLRTRV-GGVGLLVAAAVVVLTAMSEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYD 60

Query: 61  DWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFC 120
           DWLFFVYDRNQMNVLEVNKT+YENCNSD PLHNFTTGAGRDVVHLNVT PYYFISGKGFC
Sbjct: 61  DWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTGPYYFISGKGFC 120

Query: 121 YGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           YGGMKLAIHV HLPPPPSAS  N KSSALRS+YI HTPFVLTAVFAIAAL EA  + W
Sbjct: 121 YGGMKLAIHVWHLPPPPSASPFNAKSSALRSSYIAHTPFVLTAVFAIAALREAFRRFW 177

[Close]

BLAST of Clc10G14930 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 184.1 bits (466), Expect = 9.7e-47
Identity = 89/169 (52.66%), Postives = 121/169 (71.60%), Query Frame = 0


Query: 12  VLLVAAALVVLLAA-VPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 71
           VL+ A  L  L+AA +P V+A ++TVG N  W  N+NYTIWAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 72  QMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHV 131
           Q N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 132 EHLPPPPSASHLNEKSSALRSTYIGHTPFVL-TAVFAIAALYEALAQVW 179
           E LPPPP ++ +    S   S   G   F++  ++FA  A+++ ++++W
Sbjct: 126 EKLPPPPKSAPVKNIGSV--SMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]

BLAST of Clc10G14930 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 174.5 bits (441), Expect = 7.7e-44
Identity = 89/158 (56.33%), Postives = 114/158 (72.15%), Query Frame = 0


Query: 13  LLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQM 72
           +LVA A++  L A   V+A RWTVG N  W  N+NYTIWAQ KHFY DDWL+FVY+RNQ 
Sbjct: 6   VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQY 65

Query: 73  NVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHVE 132
           NV+EVN+T+Y +CN ++P+ N++ GAGRD+VHLNVTR YY ISG  G CYGGMKLA+ VE
Sbjct: 66  NVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVE 125

Query: 133 HLPPPPSASHLNEKSSALRSTYIGHTPF---VLTAVFA 167
             PPPP+A+    K+SA R+  +    +   +  AVFA
Sbjct: 126 KPPPPPAAA--PNKNSARRTFSVSGFAYQFLIPVAVFA 161

[Close]

BLAST of Clc10G14930 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-36
Identity = 71/127 (55.91%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 12  VLLVAAALVVLLAA-VPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 71
           VL+ A  L  L+AA +PEV+A ++ VG    W  N+NYT+WAQGKHFY  DWL+FV+ R+
Sbjct: 6   VLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRD 65

Query: 72  QMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHV 131
           Q N+LEVNK DYE C S+ P+ N+T GAGRD+V L  TR YY + G+G C  GMKL + V
Sbjct: 66  QHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLV 125

Query: 132 EHLPPPP 138
           E  PPPP
Sbjct: 126 ETPPPPP 132

[Close]

BLAST of Clc10G14930 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 108.2 bits (269), Expect = 6.8e-24
Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = 0


Query: 14  LVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMN 73
           LV   +++L+  V   S+     GG   W ++VN++ WA  + FY  DWL+F ++R + N
Sbjct: 9   LVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHN 68

Query: 74  VLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHL 133
           +L+VNK+ YE C  +  + N T G GRDV  L   +PYYFI G+G+C  GMKLAI V   
Sbjct: 69  ILQVNKSSYEQCVDNDYIFNITRG-GRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQ 128

Query: 134 PPPPSASHLNEKSSAL 150
           PPP + ++    ++ L
Sbjct: 129 PPPSAPTNFTSTTTPL 143

[Close]

BLAST of Clc10G14930 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 57  FYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISG 116
           F+++  L FV+ R+Q N+LEVNK DYE C S+ P+ N+T GAGRD+V L  TR YY + G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 117 KGFCYGGMKLAIHVEHLPPPP 138
           +G C  GMKL + VE  PPPP
Sbjct: 74  RGGCVQGMKLDVLVETPPPPP 94

The following BLAST results are available for this feature:

BLAST of Clc10G14930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903389.1	1.6e-88	91.57	lamin-like protein [Benincasa hispida]	[more]
XP_008443359.1	5.9e-86	88.33	PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [C...	[more]
XP_004136682.1	3.2e-84	87.71	lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319...	[more]
XP_022935116.1	8.7e-82	85.39	lamin-like protein [Cucurbita moschata]	[more]
XP_023528207.1	2.8e-80	83.80	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc10G14930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.4e-45	52.66	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q96316	5.6e-15	41.60	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
Q41001	1.9e-10	33.11	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9T076	1.9e-10	36.28	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
Q9SK27	2.4e-10	37.60	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]

BLAST of Clc10G14930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPZ3	2.8e-86	88.33	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B7D2	2.8e-86	88.33	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1	[more]
A0A0A0LC11	1.6e-84	87.71	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220...	[more]
A0A6J1F3N0	4.2e-82	85.39	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1	[more]
A0A6J1J8R9	6.8e-80	84.27	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1	[more]

BLAST of Clc10G14930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15350.1	9.7e-47	52.66	early nodulin-like protein 17	[more]
AT3G01070.1	7.7e-44	56.33	early nodulin-like protein 16	[more]
AT4G12880.1	3.5e-36	55.91	early nodulin-like protein 19	[more]
AT2G27035.1	6.8e-24	39.71	early nodulin-like protein 20	[more]
AT4G12880.2	1.0e-19	54.32	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 42..124 e-value: 3.5E-21 score: 75.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 32..132 score: 35.023087
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 30..133 e-value: 6.9E-30 score: 105.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 31..130
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 13..170
None	No IPR available	PANTHER	PTHR33021:SF231	LAMIN-LIKE PROTEIN	coord: 13..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G14930.1	Clc10G14930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity