Clc10G13380 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGACATTTACCAAATAAGTCTTATAGATGGATTATCTAATTAATAGTGTGTATATACATTATATATAAATATATATTACATCATCAATATTACATAAATAATATAAGAGGGAAGTAAAAATATGATAGCCATGTAGTTATAAAAGCTCAATATTACTAACAACCTTTTAATCTTATTTGGCTTCTTTATAAAAGCCCTAGCTACCCCCATTATCTTATTAACTCTTCATCTCTCTCTCTTCCATCTTTTTCTCTCTCTCTTTCATTTCTCTCTCTCTCTTTGAGGAGAGATATAGAAAAAAAAATGGATAAAAGAGCATGCAATATTAATAATAATAACTCACCACAAGATGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGATTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAATTCTCTTGCTAAATCTGCTGGTAATAATAATCTCTCTCTCTCTTTTCTCTAAGTTTCTTGAAAAAACCCTAATTTTTTTCTCTCGTTTCTTCTCCTCGGAAAAATCGTCGTTCCAGGTCTGAAACGTACCGGGAAGAGTTGTCGACTTCGGTGGTTGAACTACCTCCGTCCCGACGTCCGACGTGGCAACATCACCCCGGAGGAACAACTGTTGATTATGGAACTCCATGCAAAATGGGGAAACAAGTAAGTTTTTTTTTTTTTTTTTGGGAAGTATTTACGTAAATTGTATTAATATATATAAATATGTATTTTCAAATATAACATCAAACTCTAATTCGAATGAAGACAAACTATTTAAAAGTGAGGTGATAATTCAAATATTTGACCTATAGTCGATATATTTATAAAGAAGCGAAATCTTATTAAAATTTTATCCTGCTTAAAAATCGAAAATCAATCAAATTTTATCGAGAAAAAGAATATCGGTGGTGTTTTTTCTTCTCCGTTCACCGGCCGGCCGGCGGCTTGGGCTGAGATTTTGGAGTGTCTTATTAAAGGGTTTCGTAGGAGAGAGAGAGGTTTGGCAGGAAGAATATTTTGAGGCTTCCATGGCCACGAAAAAGATATGCAACACGTTTGTTTTAGATTCATGGCCACCAAAATTCGGATTCATATATATATATATATATTTAGACTCTCTTTTTTCTACACGTTTTGATCGATTTTTATTTTCTTTTAATTTTTCAATCATTTATTTGGGCGAATTGAAGGTGGAAAAAAAAAAGAAAAAAGATTTTGCATGGGTATGCAATAAATTTGTTTATGTTTTTTTTTTTTTTTTAATTATTATTATTATTATTTTTTTAATTTTTAATTTTTATTTATTTATGGTTTTTGACTTTTTTTTTTCTCTATGAATTTTCTTTTCCCAACTCATATTTTTCTTCGGAAGTGTTTATTTTATTTTGTAATGTTTATTATTTTTCTCGATTTTCTCACGTATCTTCCTTCTTTCTATTTTAGATTTTTTTTTTATTGAAAAAAGTCTAATTATGTGTTAAAAATATAGATGTATATATTTTATTTATAAAAAAAAAAAAAATCTAACTGTGTGTTTGATAGTTAATTTCTCTTTTTTAAAAGATTAAGGTTGTTTCTCGATTAATTTTTCCCCCCAAGGATTTCAAAGTTTATCTTTAAAAAATCCAAGCCAACATATTAGTACTATTTAATGAGATTAATTATTAAAAGTAGAAAAATTAGAAAAAGTAAAATAGTGATTAAATGAGATCTATACATAAAGTGGAGAGAGAAAAAAAAGGGGTGGATTATCTCTTCTTAGCTAAGCAATAATTAGGTGTAACCTAAGTAGTACTTATTCTCATGCAACTCAATTTTATTACATAGAAAAAAGAATAATTTAATTATTATTTTTTAAAAAAATATTCGTCACATGACAAATTTTAATTGGGTAACTAAGTGAGTTGCACAAAAGATAGATGCAACTAGCCTAACCAACACTTATTTTTTTTTGTAAATTATAAAATTATAATAAAAAGGTCGAGACTTTATTATTATTATTTTAAAATTTACTCCATCCTTACTACCATTGTCATAATTGAAATACTATGTATAAAAGGAAAATTTTACTATTTTTTTGCATTAATTTATGGAATGTTATAGTCATACATATACAATATATGTCATAATGAGTATACGTCAACTGACATCTAATATGTGTTAGCACATATGCACGTGCACCATATAACTATATATCAATATGCATATAAATACTAAAAGAAAATGAGTAGAAAAATATATTGAAAAAGTAAATTGAGTTTGTACATTTATTTGAAGAAAAAGATGTGTTTTAATTACAGCTGGTGGGAATATAAGAAAAGCATGTTATGAAAGGAGAGGAAAAGAGAAGACATTTTGCAATAAAAGTTTTCCATTTTTAGCTAAACCCACAGCACTTAGCCACATGGATTTTCCCTTTTATTCATAAGCAAAAAGAAAAAGAAATTTTAAAACACAATAATTTTAGAAACAAACAAACAGCCCCCATTTTCTTTGTCTTGATATGACCCAATACCCTTTTACCAAAAAAAAAAAATCTAAAACTTTTGTTTTTTTTTTCCTGATCTGCCCATTTATATGACTAAAATTAAAATAAATAAATAAATAAATGATGGAGAAAAAAAATTATTAGTCTTTTTATAAAGATTAATTATCTAATTAGAAATTATATTTTGTATTTTTTAAAAAATTTAGAAACTAAAAATGATACAAGGTTTAAAAATTTCGATACTAAAATGTGATTCTTTCGATAAAATCCTTATGGTAAGGGAAGTGTTAGAAAAAAAAGTTGTGAGAGGGAAAAAATGAATATTCTTTCAGCAGCCATTTGAAGAACAACTCTACCTGTGATTCAGCATTGTCTTCTCAAATTGGAAATTACTTGAAAATGAATCTGACTTTTTTTTTTTTTTTTTTTTTCTTGGTTTGATTTTTGTGAACTTTTTTTCCTTCTATGCTACAAATCCTTTCAAAATCTTGGGATCTTTAGATCCCTTTAAATACAAGAAGTCCTATGCGGAGGAGATTGATTTTCAGCCATGGAACATGACCAATTAAATTTAACCCACAAATATATGAAATTATAAAATAAAAATAAATAATTACCTCAAATTTTCATGGCTCTAAATGCATTTCATTTAATTTCAATTCAAACATGTGTGTAAATATATATTATTGCACATTTTCTGATTTCCCTCTATTCTTGTCTCTTTGTTGATGATTATTCTTGTTGTCACATTGTCATTTTCTCTATATTTATTATTTATATATCAGCAATAATAATAACATGACGGTTATTTCAAAATTTTTATATTTTTTTTATTTAGTCCGTACATATTTGAGAGTTATTTTAGAATTGTCAAAATCACTTTTGTAATATTCAAAATTATTCCGAAACATGTATTTGATCACTAAAAATTAATTTAATATTTAATTTTACACTTATAAATGAAATTTTCATTCTATAAACTTAATTTTAAATTCTTAAAATCATATTTTAGAGTATTTTAACAAAAAAAAAAAAAAGATTTTAGACATTTTGAGAACTTCAAAGTTAGTTGCTAGCTAACATGAGTATGGGCTCAAATAACATAAACTTGTACTATCCTTAACCTCGAGATCTAAGGTTCGACCCTTCATCCCATATATTATAAAAAAAGGGGGTTAATTTTGACGGGATTACCTCATTAGATAAATACGAGGTTTTATCTCTAAGCTAATTGATAGTAAGATGAATATTTTTTTTTTAACAAAATTACTAGAGGTCAAGGCATTAATTGTCGCACTTGAGTATCTCAACTAGGTTGACACACCCTTCTTACCTTCATCACGCGTTGAATGAGTAACTTAATATTTTTTTGTTGGAATCTAGCTAATGTTTATTTGGACTTCTTGGACGTCTCTAATACTATATTAGATAAATATGAAGTTTCTATCTCAAAACCAACTGACAGTAGGAGAAATAATAACTAATCATGTCGTATCCTATAAAGATTGTGAGAGGTTTCTCCATCTTTTCTAATGTACGTTACGTTTGAATATATTTGTATAGGTGGTCGAAAATAGCAAAGCATCTCCCAGGAAGAACTGATAATGAAATAAAGAACTACTGGAGGACGAGAATTCAAAAGCACATAAAGCAATCACATGTGTTCCACACTCCACAAACAAATGTATTATTTTCTCAAGATCATCAAATGAATGAACAAGCTGCAAGTTCAAGTAGCTGCCAAGTTTCATACACAATGGATCCAATGGAAACCTATTCTCCTCCAACTTATTCTCAAAACATTGATGCTTTCTCAGTGCCTATGCCCCCAACTGATAATTCCAATGACAATTATTGGAGCATGGAGGATCTCTGGTCTATGCAACTTCTCAATGCTGAGTAAAATAAAATAAAACAATATAATATATATAATTTGGATGATATTTGAACTTAAAATATTTCATTATTTTGGTTCAATATCATTAGGGTTGTCTATATAGTTTGGAAAAAAATATATATGTGTATTTTTCCAGTTATATATATAAGTAGACTAAAAGCATATATGGCTTTATGTTTAAAAATTTGCATATTTTCTCTCTTATATTTATATATATATATATATATATAGGGAAATATGAGTACATTTCCCCTTGATGTATATCTCTCTCTCTTTTATATCATGCCCTTATAATATTAGGCTATATTGTGCTAGCTAGCTTATTGCATGGTTTAAACTTAATTAAATGTTTATTTACTATATAGCTTTTAATTAGGTTAAAGTCTCTAAACTTTGAAAATTG CTGACATTTACCAAATAAGTCTTATAGATGGATTATCTAATTAATAGTGTGTATATACATTATATATAAATATATATTACATCATCAATATTACATAAATAATATAAGAGGGAAGTAAAAATATGATAGCCATGTAGTTATAAAAGCTCAATATTACTAACAACCTTTTAATCTTATTTGGCTTCTTTATAAAAGCCCTAGCTACCCCCATTATCTTATTAACTCTTCATCTCTCTCTCTTCCATCTTTTTCTCTCTCTCTTTCATTTCTCTCTCTCTCTTTGAGGAGAGATATAGAAAAAAAAATGGATAAAAGAGCATGCAATATTAATAATAATAACTCACCACAAGATGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGATTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAATTCTCTTGCTAAATCTGCTGGTCTGAAACGTACCGGGAAGAGTTGTCGACTTCGGTGGTTGAACTACCTCCGTCCCGACGTCCGACGTGGCAACATCACCCCGGAGGAACAACTGTTGATTATGGAACTCCATGCAAAATGGGGAAACAAGTGGTCGAAAATAGCAAAGCATCTCCCAGGAAGAACTGATAATGAAATAAAGAACTACTGGAGGACGAGAATTCAAAAGCACATAAAGCAATCACATGTGTTCCACACTCCACAAACAAATGTATTATTTTCTCAAGATCATCAAATGAATGAACAAGCTGCAAGTTCAAGTAGCTGCCAAGTTTCATACACAATGGATCCAATGGAAACCTATTCTCCTCCAACTTATTCTCAAAACATTGATGCTTTCTCAGTGCCTATGCCCCCAACTGATAATTCCAATGACAATTATTGGAGCATGGAGGATCTCTGGTCTATGCAACTTCTCAATGCTGAGTAAAATAAAATAAAACAATATAATATATATAATTTGGATGATATTTGAACTTAAAATATTTCATTATTTTGGTTCAATATCATTAGGGTTGTCTATATAGTTTGGAAAAAAATATATATGTGTATTTTTCCAGTTATATATATAAGTAGACTAAAAGCATATATGGCTTTATGTTTAAAAATTTGCATATTTTCTCTCTTATATTTATATATATATATATATATATAGGGAAATATGAGTACATTTCCCCTTGATGTATATCTCTCTCTCTTTTATATCATGCCCTTATAATATTAGGCTATATTGTGCTAGCTAGCTTATTGCATGGTTTAAACTTAATTAAATGTTTATTTACTATATAGCTTTTAATTAGGTTAAAGTCTCTAAACTTTGAAAATTG ATGGATAAAAGAGCATGCAATATTAATAATAATAACTCACCACAAGATGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGATTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAATTCTCTTGCTAAATCTGCTGGTCTGAAACGTACCGGGAAGAGTTGTCGACTTCGGTGGTTGAACTACCTCCGTCCCGACGTCCGACGTGGCAACATCACCCCGGAGGAACAACTGTTGATTATGGAACTCCATGCAAAATGGGGAAACAAGTGGTCGAAAATAGCAAAGCATCTCCCAGGAAGAACTGATAATGAAATAAAGAACTACTGGAGGACGAGAATTCAAAAGCACATAAAGCAATCACATGTGTTCCACACTCCACAAACAAATGTATTATTTTCTCAAGATCATCAAATGAATGAACAAGCTGCAAGTTCAAGTAGCTGCCAAGTTTCATACACAATGGATCCAATGGAAACCTATTCTCCTCCAACTTATTCTCAAAACATTGATGCTTTCTCAGTGCCTATGCCCCCAACTGATAATTCCAATGACAATTATTGGAGCATGGAGGATCTCTGGTCTATGCAACTTCTCAATGCTGAGTAA MDKRACNINNNNSPQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNKWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQSHVFHTPQTNVLFSQDHQMNEQAASSSSCQVSYTMDPMETYSPPTYSQNIDAFSVPMPPTDNSNDNYWSMEDLWSMQLLNAE Homology
BLAST of Clc10G13380 vs. NCBI nr
Match: XP_038903806.1 (MYB-like transcription factor EOBII [Benincasa hispida]) HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-113 Identity = 200/209 (95.69%), Postives = 204/209 (97.61%), Query Frame = 0
BLAST of Clc10G13380 vs. NCBI nr
Match: XP_004141095.1 (myb-related protein 305 [Cucumis sativus] >KAE8651255.1 hypothetical protein Csa_000982 [Cucumis sativus]) HSP 1 Score: 397.5 bits (1020), Expect = 7.0e-107 Identity = 197/218 (90.37%), Postives = 201/218 (92.20%), Query Frame = 0
BLAST of Clc10G13380 vs. NCBI nr
Match: XP_008443525.1 (PREDICTED: myb-related protein 305 [Cucumis melo]) HSP 1 Score: 392.9 bits (1008), Expect = 1.7e-105 Identity = 197/219 (89.95%), Postives = 201/219 (91.78%), Query Frame = 0
BLAST of Clc10G13380 vs. NCBI nr
Match: XP_022983180.1 (myb-related protein 305-like [Cucurbita maxima]) HSP 1 Score: 372.1 bits (954), Expect = 3.1e-99 Identity = 181/208 (87.02%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Clc10G13380 vs. NCBI nr
Match: XP_022934871.1 (myb-related protein 305-like [Cucurbita moschata] >XP_023528397.1 myb-related protein 305-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6581038.1 Myb-related protein 305, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017768.1 Myb-related protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99 Identity = 181/208 (87.02%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy Swiss-Prot
Match: P81391 (Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 9.3e-78 Identity = 151/216 (69.91%), Postives = 167/216 (77.31%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy Swiss-Prot
Match: E0CJS3 (MYB-like transcription factor EOBII OS=Petunia hybrida OX=4102 GN=EOBII PE=2 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 2.5e-75 Identity = 141/207 (68.12%), Postives = 156/207 (75.36%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy Swiss-Prot
Match: L7R9Z0 (MYB-like transcription factor EOBI OS=Petunia hybrida OX=4102 GN=EOBI PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.8e-74 Identity = 143/211 (67.77%), Postives = 161/211 (76.30%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy Swiss-Prot
Match: Q9LK95 (Transcription factor MYB21 OS=Arabidopsis thaliana OX=3702 GN=MYB21 PE=1 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.9e-71 Identity = 145/226 (64.16%), Postives = 167/226 (73.89%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy Swiss-Prot
Match: P81396 (Myb-related protein 340 OS=Antirrhinum majus OX=4151 GN=MYB340 PE=2 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 3.0e-68 Identity = 137/209 (65.55%), Postives = 152/209 (72.73%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy TrEMBL
Match: A0A1S3B886 (myb-related protein 305 OS=Cucumis melo OX=3656 GN=LOC103487095 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 8.3e-106 Identity = 197/219 (89.95%), Postives = 201/219 (91.78%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy TrEMBL
Match: A0A6J1J524 (myb-related protein 305-like OS=Cucurbita maxima OX=3661 GN=LOC111481836 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99 Identity = 181/208 (87.02%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy TrEMBL
Match: A0A6J1F320 (myb-related protein 305-like OS=Cucurbita moschata OX=3662 GN=LOC111441911 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99 Identity = 181/208 (87.02%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy TrEMBL
Match: A0A6J1DFI0 (myb-related protein 305-like OS=Momordica charantia OX=3673 GN=LOC111019967 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 6.0e-96 Identity = 173/207 (83.57%), Postives = 186/207 (89.86%), Query Frame = 0
BLAST of Clc10G13380 vs. ExPASy TrEMBL
Match: A0A498HIY5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037239 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 1.0e-79 Identity = 153/208 (73.56%), Postives = 173/208 (83.17%), Query Frame = 0
BLAST of Clc10G13380 vs. TAIR 10
Match: AT3G27810.1 (myb domain protein 21 ) HSP 1 Score: 269.6 bits (688), Expect = 2.0e-72 Identity = 145/226 (64.16%), Postives = 167/226 (73.89%), Query Frame = 0
BLAST of Clc10G13380 vs. TAIR 10
Match: AT5G40350.1 (myb domain protein 24 ) HSP 1 Score: 249.6 bits (636), Expect = 2.2e-66 Identity = 133/220 (60.45%), Postives = 158/220 (71.82%), Query Frame = 0
BLAST of Clc10G13380 vs. TAIR 10
Match: AT3G01530.1 (myb domain protein 57 ) HSP 1 Score: 226.1 bits (575), Expect = 2.6e-59 Identity = 114/191 (59.69%), Postives = 138/191 (72.25%), Query Frame = 0
BLAST of Clc10G13380 vs. TAIR 10
Match: AT3G06490.1 (myb domain protein 108 ) HSP 1 Score: 206.5 bits (524), Expect = 2.1e-53 Identity = 89/125 (71.20%), Postives = 111/125 (88.80%), Query Frame = 0
BLAST of Clc10G13380 vs. TAIR 10
Match: AT5G49620.1 (myb domain protein 78 ) HSP 1 Score: 204.9 bits (520), Expect = 6.2e-53 Identity = 94/127 (74.02%), Postives = 109/127 (85.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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