Clc10G12150 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G12150
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	phosphatidyl-N-methylethanolamine N-methyltransferase
Location	ClcChr10: 25624394 .. 25628338 (+)
RNA-Seq Expression	Clc10G12150
Synteny	Clc10G12150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGAATCATTTTCCGGAGAAAGTGGAGAGAATCCGGCAAGAAAATTATCAGAATGGGCATTTTGGCCGTAATTGGAGTGTTGTTGCCATTTCCGTACTACTACGTCTTATGGAATCGTCCACAGTTGTGGGTGAACTTGTGCGGAAAATCGCGCGAACCATGCAAATTGATGGCCCAGGTCTCCGTTTTTCTCAAGTTGCTTCAGTTCCTCTCCATCTTTTATGTCTCCTCCTTCTCATGGCCGCCGCCTCTATACTTCTGGCCTCTCATGGCCTTCGGACAGTTCTTGAACTTCAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGATGTGCTGATGCTGAAGTCTGCTTCGAATGTAGTTGCTTCTTACCATGACTTTTTTGCATGCTATTGAATTTGCGAGCTGGAAGTTAAAGTAACAATTTATTGTGCAATTTTTGTAGTAGGCCATATGACAGTGATCTATGCTGTTAAATCTCGAGAAAATGAGGGCGTTTTTGTATTCATAACTATGTTCGTGTGTGGGTGTGTGTGTTACGAATGAATTTAATGATTAAATTTCTCTTATTAGCTTAAACTTATTGGATTAGGAGATGATTAGCAATGTGGGGATAATTGTGAGTTCGGGGTGGGTTTTTAGCACTTTATCGATAGTAAAAAGCATTAAAAGTAGAAGTTTTCTTTTAGAATTTTCATTACCATCTAAGAATGTCTAGCCAAATACACTGAAAATTGTAGAAAGTACCTTTAGTTTGGCTAAAAGTACTTTTTGGTTTTTATCCTTCCAAATTCATCCCAATCTAGGGTTGGAACCTCGGCAATCTTTGAAGTTTTAAGTTGAGTTTTCTTTTCTTCGGGATAGATTCAAAACTTGAATTCAGTGCTTATTCTAAGTTCAGTTGAGTTTTCTCCCTTTCTGGGAGGACGAATGGTTGTGTTGCACTTGAAAGCAATTATTGGAGTGAAGTTCTTGGTGGAAACCAATGAGATCAAAAGATTGGAGGTATCACAAAGAAAAACTATCTAATTAGGTTAACAAACAAAAGATTAAGGCATTTTTGGAATGACTTTCTAGGTTCTTAAAAAAGTGGTTTTAAGCACTTAGAAAGTGATAACTACAAACTTATTTAGTTTTTGGACATTGACAAAGAAACTTTAAGGGTAACATTATCTGAAAACTCTATTGTTCTCTTGCTTAAAATACCTCAGAAAATAGCACACACATCATCCTGCCACAAAAACCCCATTGGTGAAGTGTCATTGAACCCCATCCATCGTATTAACTCTTTCATGTAAAACTTGGCAAGCAAACACCTTTACATTCTTAGAAATTCTAACCTATTAGAGTGAAGAAAAAATTGAGGCAACCGGAGAAAAGGGGTAGACAAGATATGAAAAAGTTGTGGCAAGAGAACTCCTAGAAGGATTAGGGACCGATCCCGAACATCCCTTCTCTCTGGGAGATATTGGTCTTGAATAAGAGAAAGAAGACTCGCTACTTTAGACACTTAACTATCAGACAGAGGACTACAGAAGTCTAAAAGAGATTGAAGAAGGGTTTGGGAAAGGCAACGTTGAGGCTACAGAATGTAGTCTCTTATTCGATAATGGTATGCGGCAGAAATAAAGCATGAATCACCACTTGCAACCCACTCAAAAGGATGAGGATCATACCTACTGACTATCTCACCCTAAACGACAGCATGTTAGTCTCCATGAAGAAACTCCACAACCACTTTGCCAGGGAAGCCTTAATATGCCGTCTTAAACTCTCAACTCCTTGTTCCTTAGGCTTCTAACACCACCTCCCACTCAAGTGGGACTTTGCCCCTCATCCATCCCTTCCCAGTTCCCACAAGAAATTTCTAATTGATCTTTCAATTTTCTTACGCAGCCTAACTGAAATTCTTAAAAGAGAAAGGCAGTAACTTAGCATCCCACCTCGACTAGCTTCATTTTAAGTGGGTGGCTCATACACCTGACCTAGTGTATTTTTAGTGGTGTTAATGAAATTTTATTTCCTATGAAAACGAAAAAAACAATTGTAATAACTTAAGTGCGGAGCTTGTTGCATCAAAGTGAGCATCTCAGAAGTTAAAACTCAACAGCTGCAAAAACCATTTCCATGCCTAGGATTATGTGGTGCTTTAAAGATGAGAATGATTGCAATTTAAGAGGCTTTATTAGAATGGAAAATAACTTCCCTCATTAATTAGTGGCTTGAAAGGATTCAGTATTTGGATCTTTAATGTGAATAAGAACCTGTGCTATATTTTCTTTTGTTGCTTTGCATTTTTCAATATCCGACCGATCATTAATGCTTATGTTCAAATTGATGGTGCTGAACTTTATCTGTTCTCAGATCCTTTTTCATTGATTTTGAGATAGAATAATGGTGCTTGGAATAGTCAAACAAGCTTTATAGAGACTATTTTCTTAGTACAATTGTCTCATTTGATTGGTAGTCTTCACTAAATACGCCATTTATGATTATTACTATATATCATAGTACAAACAACTAGGTTTACGTGAATGTTCATTTCTTAAGCTCAAGTTTCTCTAATTCAGGAACAAGATGATGGGAACGAGAAATCAAAACAGAAAATATCAGAAAATACTATTAGAACTACAAAGAAAATAACAGCCCTAAGCACTTTGAGATTCTCGAACTCTCCTTAGAGTCTACTATCTGAAAATAGACTAAGTATCAGAATCAGCTGCTTTAATTTCCATTCGAAGCATAGAAAGCAAAGAAACTAAAGCACTAAATGCTATTCAAGATTGAAGTTTTAGGATGTTCATTTCTATTATGTAGCATACTATTCCAGGCAACTAAATACATCTGTTACTGGGTCATCAAGTAAGATTGGTGTGTGGAATTCGTTGCCGCTTAATTTTCACAATGTTGCTGCAGTTTTTCAGGGTCAATTGAAAGAAAAAATATCATATTGTTGTGGCTTGTAACATTAAGTACCATTTTCTTATCTTCTGCCAAACAACAGGGTCTACCAGTTACTCGGTGAATCTGGTGTTTACTATGGAGTACGATTTGGGAAGAACATTCCGTGGGTAACCGAATTTCCATTTGGATATATTAAAGATCCTCAGTATGTGGGAAGCATTTTGAGCCTTTTTGCTTGTCTTTCGTGGGTACCCTTACAATATATTCTGCTCTGGACACTGGGTTACATGTTTATGATGCATGTTGAATCCAAGGAAGATCCTGCCACTCGAGCAAAGCCTCAAAGTTGAATTTGTGAGAGAATAATCTTGGAATATCGACATCCAAACAATGGATCAATATGTGATCGCTGGCAACTTGGTTCAAGCATCCATTAGCCTGGTAACGATCCCAAGATCAAAGCTCTTGAAAATTTGAATGTTATCCCAGTTTGAGCTTTTTGATGATGTCCTCACTTCTAGTCTTCCCATTGTTTGTGGGTTCGCTTGATAATGATGCCAGTTCTTGTTCAAGTCTTTTGGAAGCTTGAATTCTAGGAAATTATTGTTAAAAATAAATACGAGGAATAAGACATGTCATGTATTCAATTCTAGACTTTGTAGATTTCTTTCTGACATTCAAATATCAAAATTATTGTTAAAAAAAAAAAAGAAAAAGAAAAATACATATGCGTTTGATAACTGTATTGCTTATGCTTAATGTCTGAAGAAACATAAAGTATGTATTTAGTACATGGGAATGAGTAAGGAATTATTATAATTTCCTAAGATTATAATCTGATCATTTAAAAAATTCAAAATGAAAATCAAGTTCAAAGCAAATGGATGTATGTTTGAATCTCCACCTTGTTTCACACAATCCCACAAATATATATGTGTGTGTGTGTGTTATTGTTCTATCAAAATATATATAATCCTTGCGAGTTTAACCACAGTCTAACCTGTCAATAAAGTATAAGTAACC

mRNA sequence

CTTTGAATCATTTTCCGGAGAAAGTGGAGAGAATCCGGCAAGAAAATTATCAGAATGGGCATTTTGGCCGTAATTGGAGTGTTGTTGCCATTTCCGTACTACTACGTCTTATGGAATCGTCCACAGTTGTGGGTGAACTTGTGCGGAAAATCGCGCGAACCATGCAAATTGATGGCCCAGGTCTCCGTTTTTCTCAAGTTGCTTCAGTTCCTCTCCATCTTTTATGTCTCCTCCTTCTCATGGCCGCCGCCTCTATACTTCTGGCCTCTCATGGCCTTCGGACAGTTCTTGAACTTCAGGGTCTACCAGTTACTCGGTGAATCTGGTGTTTACTATGGAGTACGATTTGGGAAGAACATTCCGTGGGTAACCGAATTTCCATTTGGATATATTAAAGATCCTCAGTATGTGGGAAGCATTTTGAGCCTTTTTGCTTGTCTTTCGTGGGTACCCTTACAATATATTCTGCTCTGGACACTGGGTTACATGTTTATGATGCATGTTGAATCCAAGGAAGATCCTGCCACTCGAGCAAAGCCTCAAAGTTGAATTTGTGAGAGAATAATCTTGGAATATCGACATCCAAACAATGGATCAATATGTGATCGCTGGCAACTTGGTTCAAGCATCCATTAGCCTGGTAACGATCCCAAGATCAAAGCTCTTGAAAATTTGAATGTTATCCCAGTTTGAGCTTTTTGATGATGTCCTCACTTCTAGTCTTCCCATTGTTTGTGGGTTCGCTTGATAATGATGCCAGTTCTTGTTCAAGTCTTTTGGAAGCTTGAATTCTAGGAAATTATTGTTAAAAATAAATACGAGGAATAAGACATGTCATGTATTCAATTCTAGACTTTGTAGATTTCTTTCTGACATTCAAATATCAAAATTATTGTTAAAAAAAAAAAAGAAAAAGAAAAATACATATGCGTTTGATAACTGTATTGCTTATGCTTAATGTCTGAAGAAACATAAAGTATGTATTTAGTACATGGGAATGAGTAAGGAATTATTATAATTTCCTAAGATTATAATCTGATCATTTAAAAAATTCAAAATGAAAATCAAGTTCAAAGCAAATGGATGTATGTTTGAATCTCCACCTTGTTTCACACAATCCCACAAATATATATGTGTGTGTGTGTGTTATTGTTCTATCAAAATATATATAATCCTTGCGAGTTTAACCACAGTCTAACCTGTCAATAAAGTATAAGTAACC

Coding sequence (CDS)

ATGGGCATTTTGGCCGTAATTGGAGTGTTGTTGCCATTTCCGTACTACTACGTCTTATGGAATCGTCCACAGTTGTGGGTGAACTTGTGCGGAAAATCGCGCGAACCATGCAAATTGATGGCCCAGGTCTCCGTTTTTCTCAAGTTGCTTCAGTTCCTCTCCATCTTTTATGTCTCCTCCTTCTCATGGCCGCCGCCTCTATACTTCTGGCCTCTCATGGCCTTCGGACAGTTCTTGAACTTCAGGGTCTACCAGTTACTCGGTGAATCTGGTGTTTACTATGGAGTACGATTTGGGAAGAACATTCCGTGGGTAACCGAATTTCCATTTGGATATATTAAAGATCCTCAGTATGTGGGAAGCATTTTGAGCCTTTTTGCTTGTCTTTCGTGGGTACCCTTACAATATATTCTGCTCTGGACACTGGGTTACATGTTTATGATGCATGTTGAATCCAAGGAAGATCCTGCCACTCGAGCAAAGCCTCAAAGTTGA

Protein sequence

MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSSFSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVGSILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS

Homology

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BLAST of Clc10G12150 vs. NCBI nr
Match: XP_008465151.2 (PREDICTED: phosphatidyl-N-methylethanolamine N-methyltransferase [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 1.8e-89
Identity = 160/164 (97.56%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSI +VSS
Sbjct: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIIHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSLFACLSWVPL+YILLWTLGY+FMMHVESKEDPATRAKPQS
Sbjct: 121 SILSLFACLSWVPLKYILLWTLGYIFMMHVESKEDPATRAKPQS 164

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BLAST of Clc10G12150 vs. NCBI nr
Match: XP_004137657.1 (phosphatidyl-N-methylethanolamine N-methyltransferase [Cucumis sativus] >KAE8650956.1 hypothetical protein Csa_002414 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 7.5e-88
Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGI AVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSI +VSS
Sbjct: 1   MGIFAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIIHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSLFACLSWVPL+YILLWTLGY+FMMHVESKED ATRAKPQS
Sbjct: 121 SILSLFACLSWVPLKYILLWTLGYIFMMHVESKEDLATRAKPQS 164

[Close]

BLAST of Clc10G12150 vs. NCBI nr
Match: XP_038903463.1 (phosphatidyl-N-methylethanolamine N-methyltransferase [Benincasa hispida])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 154/164 (93.90%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGILAV+GVLLPFPYYYVLW+RPQLWVNLCGKSR+PCKLMAQVSVFLKLLQFLSIF+VSS
Sbjct: 1   MGILAVLGVLLPFPYYYVLWSRPQLWVNLCGKSRDPCKLMAQVSVFLKLLQFLSIFHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           F+WPPPLYFWPLMAFGQFLNFRVYQLLGE+GVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FAWPPPLYFWPLMAFGQFLNFRVYQLLGEAGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSLFACLSWVPLQYI+LWTLGY+FMMH+ESKE PATRAKPQS
Sbjct: 121 SILSLFACLSWVPLQYIMLWTLGYIFMMHIESKEHPATRAKPQS 164

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BLAST of Clc10G12150 vs. NCBI nr
Match: XP_022153398.1 (phosphatidyl-N-methylethanolamine N-methyltransferase [Momordica charantia])

HSP 1 Score: 314.3 bits (804), Expect = 6.2e-82
Identity = 147/164 (89.63%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGI+A IGVLLPFP+YYVLW RPQLW N CGK REPCKLMA+VS+FLKLLQFLSI +VSS
Sbjct: 1   MGIIAGIGVLLPFPFYYVLWTRPQLWANFCGKWREPCKLMARVSIFLKLLQFLSILHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYI+DPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIRDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILS+FACLSWVPLQYILL TLGY+FMM VESKEDP TRAKPQS
Sbjct: 121 SILSIFACLSWVPLQYILLLTLGYVFMMQVESKEDPTTRAKPQS 164

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BLAST of Clc10G12150 vs. NCBI nr
Match: KAG7036543.1 (Phosphatidyl-N-methylethanolamine N-methyltransferase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 149/164 (90.85%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           M +LAVIGVLLPFPYYYVLW RPQLWVNLCGK  EP KLMAQVSVFLKLLQFLSI +VSS
Sbjct: 1   MDVLAVIGVLLPFPYYYVLWTRPQLWVNLCGKWCEPSKLMAQVSVFLKLLQFLSILHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGE+GVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSL ACLSWVPLQYILLWT+GY+FMM VESKED  TRAKPQS
Sbjct: 121 SILSLLACLSWVPLQYILLWTMGYVFMMQVESKEDLTTRAKPQS 164

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BLAST of Clc10G12150 vs. ExPASy Swiss-Prot
Match: Q9SAH5 (Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=PLMT PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-70
Identity = 123/161 (76.40%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MG+LA IGVLLPFP+Y+ LW   Q WVNLCG+ R+P  +MA+VS  LK  Q LS+F V+S
Sbjct: 1   MGLLAAIGVLLPFPFYWWLWTNAQSWVNLCGRERDPSTVMARVSHVLKAAQLLSLFSVAS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
            SWPPPLYFWPLMAFGQFLNFRVYQLLGE+G YYGVRFGKNIPWVTEFPFG I+DPQYVG
Sbjct: 61  LSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTEFPFGVIRDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAK 162
           SI+SL ACLSWVP QYILLW+LGY+FMM +ESKEDP  RAK
Sbjct: 121 SIMSLLACLSWVPFQYILLWSLGYVFMMFLESKEDPNARAK 161

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BLAST of Clc10G12150 vs. ExPASy TrEMBL
Match: A0A1S3CPQ5 (phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103502819 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 8.7e-90
Identity = 160/164 (97.56%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSI +VSS
Sbjct: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIIHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSLFACLSWVPL+YILLWTLGY+FMMHVESKEDPATRAKPQS
Sbjct: 121 SILSLFACLSWVPLKYILLWTLGYIFMMHVESKEDPATRAKPQS 164

[Close]

BLAST of Clc10G12150 vs. ExPASy TrEMBL
Match: A0A6J1DHC8 (phosphatidyl-N-methylethanolamine N-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111020909 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.0e-82
Identity = 147/164 (89.63%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGI+A IGVLLPFP+YYVLW RPQLW N CGK REPCKLMA+VS+FLKLLQFLSI +VSS
Sbjct: 1   MGIIAGIGVLLPFPFYYVLWTRPQLWANFCGKWREPCKLMARVSIFLKLLQFLSILHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYI+DPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIRDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILS+FACLSWVPLQYILL TLGY+FMM VESKEDP TRAKPQS
Sbjct: 121 SILSIFACLSWVPLQYILLLTLGYVFMMQVESKEDPTTRAKPQS 164

[Close]

BLAST of Clc10G12150 vs. ExPASy TrEMBL
Match: A0A6J1KB80 (phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111492722 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 148/164 (90.24%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           M +LAVIGVLLPFPYYY+LW RPQLWVNLCGK  EP KLMAQVSVFLKLLQFLSI +VSS
Sbjct: 1   MDVLAVIGVLLPFPYYYLLWTRPQLWVNLCGKWCEPSKLMAQVSVFLKLLQFLSILHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGE+GVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSL ACLSWVPLQYILLWT+GY+FMM VESKED  TRAKPQS
Sbjct: 121 SILSLLACLSWVPLQYILLWTMGYVFMMQVESKEDLTTRAKPQS 164

[Close]

BLAST of Clc10G12150 vs. ExPASy TrEMBL
Match: A0A6J1GCG7 (phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111452701 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81
Identity = 148/164 (90.24%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           M +LAVIGVLLPFPYYYVLW RPQLWVNLCGK  EP KLMAQVSVFLKLLQ LSI +VSS
Sbjct: 1   MDVLAVIGVLLPFPYYYVLWTRPQLWVNLCGKWCEPSKLMAQVSVFLKLLQILSILHVSS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPLMAFGQFLNFRVYQLLGE+GVYYGVRFGKNIPWVTEFPFGYIKDPQYVG
Sbjct: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSL ACLSWVPLQYILLWT+GY+FMM VESKED  TRAKPQS
Sbjct: 121 SILSLLACLSWVPLQYILLWTMGYVFMMQVESKEDLTTRAKPQS 164

[Close]

BLAST of Clc10G12150 vs. ExPASy TrEMBL
Match: A0A540MA33 (Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Malus baccata OX=106549 GN=C1H46_018753 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 134/164 (81.71%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MGI A IGVL PFP+YY LW+ PQ WV LCGK R+PCK+MA VS FLKL+QFLS+F VS+
Sbjct: 1   MGIAAAIGVLSPFPFYYWLWSYPQTWVELCGKGRDPCKVMAYVSHFLKLIQFLSLFSVST 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
           FSWPPPLYFWPL+AFGQFLNFRVYQLLGESG YYGVRFGKNIPWVTEFPFGY+KDPQYVG
Sbjct: 61  FSWPPPLYFWPLIAFGQFLNFRVYQLLGESGTYYGVRFGKNIPWVTEFPFGYVKDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAKPQS 165
           SILSLFAC+SWVP QYI LWTLGY+ M+++ESKEDPATRAKP S
Sbjct: 121 SILSLFACVSWVPFQYISLWTLGYVAMIYLESKEDPATRAKPPS 164

[Close]

BLAST of Clc10G12150 vs. TAIR 10
Match: AT1G80860.2 (phospholipid N-methyltransferase )

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-71
Identity = 123/161 (76.40%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MG+LA IGVLLPFP+Y+ LW   Q WVNLCG+ R+P  +MA+VS  LK  Q LS+F V+S
Sbjct: 1   MGLLAAIGVLLPFPFYWWLWTNAQSWVNLCGRERDPSTVMARVSHVLKAAQLLSLFSVAS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
            SWPPPLYFWPLMAFGQFLNFRVYQLLGE+G YYGVRFGKNIPWVTEFPFG I+DPQYVG
Sbjct: 61  LSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTEFPFGVIRDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAK 162
           SI+SL ACLSWVP QYILLW+LGY+FMM +ESKEDP  RAK
Sbjct: 121 SIMSLLACLSWVPFQYILLWSLGYVFMMFLESKEDPNARAK 161

[Close]

BLAST of Clc10G12150 vs. TAIR 10
Match: AT1G80860.1 (phospholipid N-methyltransferase )

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-71
Identity = 123/161 (76.40%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MGILAVIGVLLPFPYYYVLWNRPQLWVNLCGKSREPCKLMAQVSVFLKLLQFLSIFYVSS 60
           MG+LA IGVLLPFP+Y+ LW   Q WVNLCG+ R+P  +MA+VS  LK  Q LS+F V+S
Sbjct: 1   MGLLAAIGVLLPFPFYWWLWTNAQSWVNLCGRERDPSTVMARVSHVLKAAQLLSLFSVAS 60

Query: 61  FSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWVTEFPFGYIKDPQYVG 120
            SWPPPLYFWPLMAFGQFLNFRVYQLLGE+G YYGVRFGKNIPWVTEFPFG I+DPQYVG
Sbjct: 61  LSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTEFPFGVIRDPQYVG 120

Query: 121 SILSLFACLSWVPLQYILLWTLGYMFMMHVESKEDPATRAK 162
           SI+SL ACLSWVP QYILLW+LGY+FMM +ESKEDP  RAK
Sbjct: 121 SIMSLLACLSWVPFQYILLWSLGYVFMMFLESKEDPNARAK 161

The following BLAST results are available for this feature:

BLAST of Clc10G12150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465151.2	1.8e-89	97.56	PREDICTED: phosphatidyl-N-methylethanolamine N-methyltransferase [Cucumis melo]	[more]
XP_004137657.1	7.5e-88	96.34	phosphatidyl-N-methylethanolamine N-methyltransferase [Cucumis sativus] >KAE8650...	[more]
XP_038903463.1	1.3e-87	93.90	phosphatidyl-N-methylethanolamine N-methyltransferase [Benincasa hispida]	[more]
XP_022153398.1	6.2e-82	89.63	phosphatidyl-N-methylethanolamine N-methyltransferase [Momordica charantia]	[more]
KAG7036543.1	1.4e-81	90.85	Phosphatidyl-N-methylethanolamine N-methyltransferase [Cucurbita argyrosperma su...	[more]

BLAST of Clc10G12150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAH5	1.5e-70	76.40	Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Arabidopsis thaliana OX...	[more]

BLAST of Clc10G12150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPQ5	8.7e-90	97.56	phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DHC8	3.0e-82	89.63	phosphatidyl-N-methylethanolamine N-methyltransferase OS=Momordica charantia OX=...	[more]
A0A6J1KB80	1.5e-81	90.24	phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucurbita maxima OX=366...	[more]
A0A6J1GCG7	3.3e-81	90.24	phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucurbita moschata OX=3...	[more]
A0A540MA33	1.2e-75	81.71	Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Malus baccata OX=106549...	[more]

BLAST of Clc10G12150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80860.2	1.1e-71	76.40	phospholipid N-methyltransferase	[more]
AT1G80860.1	1.1e-71	76.40	phospholipid N-methyltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007318	Phospholipid methyltransferase	PFAM	PF04191	PEMT	coord: 71..159 e-value: 5.8E-11 score: 42.8
None	No IPR available	GENE3D	1.20.120.1630		coord: 20..161 e-value: 6.5E-6 score: 28.0
None	No IPR available	PANTHER	PTHR15458:SF5	PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE	coord: 8..162
IPR024960	Phosphatidyl-N-methylethanolamine/Phosphatidylethanolamine N-methyltransferase	PANTHER	PTHR15458	PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE	coord: 8..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G12150.1	Clc10G12150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0006656	phosphatidylcholine biosynthetic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004608	phosphatidylethanolamine N-methyltransferase activity
molecular_function	GO:0080101	phosphatidyl-N-dimethylethanolamine N-methyltransferase activity
molecular_function	GO:0000773	phosphatidyl-N-methylethanolamine N-methyltransferase activity
molecular_function	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity