Clc10G10300 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G10300
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	indole-3-acetic acid-induced protein ARG2-like
Location	ClcChr10: 23091807 .. 23092749 (+)
RNA-Seq Expression	Clc10G10300
Synteny	Clc10G10300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGACACCCACAAGCTCAGAAAATCGCACCCCTCTTTTTCTTTCTTCAAAATTGAAAATTTTCCCGAGAAACAAACGGAAAATTTTCAATTCGTTACTATATATACACACGAATGATGCCTATATCTTTCTCCAGCGTCAAGATTCTGTCCACTCTCTTCAGGTTTTTTAAAATCCCTCTCTTTTTTCTCTCGCCCTTTTTTTCACTTCCTTTTAATTAAATTATATATATTTTTTTAAAATTGCTATGAAATTGTACTTTAATTAACGTGGTGTGTGATCGGACAGGCGTGGATACACGGCGGCGCCAGAAGGAGTTGCGGCCAGAATTGGCGTTATGATGAAGAAGGAAGAATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCAGACCCCGTCACCGGTTATTACCGACCGGAGAACTGCACCGCCGAGATCGATGCTGCCGATCTCCGGACAATGCTACTGAACCCAACAGCAAAGTAATTAAATCAGTTCATGAGAGGATTTACGTATTAATTTTTGGTTAATATGCCCGATGGGCTGTTGTTAACGATGGGACTCTAAATTAATCAACTTAAAGCCACTCATTTATTTTCCACGTCGAATCCAAAAGAATTAAACTTCATAAACGGAAGCATACTTCTATGTTACCAGCTAAACAATTGTGTAAATAATTTTCTAAGTCTATATAGATCACATTTTCTTTTCTTCTTATGCTTAATCCTTTTAGTTTCTCCTCCTTTTATAGGAAGAGGAAAGAGACGAGAGAAAGTTAACGAAATATTTATCTGACATTGAGGATTATTAATTCTTTATGACCAATAAGAACAATAAAGTTATTAATCAGTTTGTGGTAATTTAATTATAATTCATCTCCTCATTAAATTAGAATTAGTATATTATTAGTACTTATACGTTTTGTCCCTGGTTCATATTCTTT

mRNA sequence

GCGACACCCACAAGCTCAGAAAATCGCACCCCTCTTTTTCTTTCTTCAAAATTGAAAATTTTCCCGAGAAACAAACGGAAAATTTTCAATTCGTTACTATATATACACACGAATGATGCCTATATCTTTCTCCAGCGTCAAGATTCTGTCCACTCTCTTCAGGCGTGGATACACGGCGGCGCCAGAAGGAGTTGCGGCCAGAATTGGCGTTATGATGAAGAAGGAAGAATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCAGACCCCGTCACCGGTTATTACCGACCGGAGAACTGCACCGCCGAGATCGATGCTGCCGATCTCCGGACAATGCTACTGAACCCAACAGCAAAGTAATTAAATCAGTTCATGAGAGGATTTACGTATTAATTTTTGGTTAATATGCCCGATGGGCTGTTGTTAACGATGGGACTCTAAATTAATCAACTTAAAGCCACTCATTTATTTTCCACGTCGAATCCAAAAGAATTAAACTTCATAAACGGAAGCATACTTCTATGTTACCAGCTAAACAATTGTGTAAATAATTTTCTAAGTCTATATAGATCACATTTTCTTTTCTTCTTATGCTTAATCCTTTTAGTTTCTCCTCCTTTTATAGGAAGAGGAAAGAGACGAGAGAAAGTTAACGAAATATTTATCTGACATTGAGGATTATTAATTCTTTATGACCAATAAGAACAATAAAGTTATTAATCAGTTTGTGGTAATTTAATTATAATTCATCTCCTCATTAAATTAGAATTAGTATATTATTAGTACTTATACGTTTTGTCCCTGGTTCATATTCTTT

Coding sequence (CDS)

ATGATGCCTATATCTTTCTCCAGCGTCAAGATTCTGTCCACTCTCTTCAGGCGTGGATACACGGCGGCGCCAGAAGGAGTTGCGGCCAGAATTGGCGTTATGATGAAGAAGGAAGAATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCAGACCCCGTCACCGGTTATTACCGACCGGAGAACTGCACCGCCGAGATCGATGCTGCCGATCTCCGGACAATGCTACTGAACCCAACAGCAAAGTAA

Protein sequence

MMPISFSSVKILSTLFRRGYTAAPEGVAARIGVMMKKEESVRSTEKVSWVPDPVTGYYRPENCTAEIDAADLRTMLLNPTAK

Homology

[Close]

BLAST of Clc10G10300 vs. NCBI nr
Match: KAA0044385.1 (protein SENESCENCE-ASSOCIATED protein 21 [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 8.0e-22
Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGY-TAAPEGVAARI-GVMMKKEESVR-STEK--VSWVPDPVTG 61
          +P SFS++  LSTLFRRGY TA+ EGVAARI  +M KKEES+R   EK  VSWVPDPVTG
Sbjct: 3  LPSSFSTLSTLSTLFRRGYATASAEGVAARISSIMKKKEESLRIGREKMAVSWVPDPVTG 62

Query: 62 YYRPENCTAEIDAADLRTMLLNPTAK 83
          YYRPENC AE+DAADLR MLLNPT K
Sbjct: 63 YYRPENCGAEMDAADLRAMLLNPTTK 88

[Close]

BLAST of Clc10G10300 vs. NCBI nr
Match: XP_011652940.1 (late embryogenesis abundant protein Lea5-A [Cucumis sativus] >KGN52818.1 hypothetical protein Csa_015124 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-21
Identity = 58/85 (68.24%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGYTAAPEGVAARI-GVMMKKEESV---RSTEKVSWVPDPVTGY 61
          MP  FS++  LS LFRRGY  APEGVAAR+ G+M KKEES+   R  + VSWVPDPVTGY
Sbjct: 1  MPSPFSTLNTLSILFRRGYATAPEGVAARLGGIMKKKEESLRIGREKKAVSWVPDPVTGY 60

Query: 62 YRPENCTAEIDAADLRTMLLNPTAK 83
          YRPENC AE+DAADLR MLLN   K
Sbjct: 61 YRPENCGAEMDAADLRAMLLNSATK 85

[Close]

BLAST of Clc10G10300 vs. NCBI nr
Match: XP_008454329.1 (PREDICTED: protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucumis melo] >TYK29513.1 SENESCENCE-ASSOCIATED GENE 21 protein [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19
Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGY-TAAPEGVAARI-GVMMKKEESVR-STEK--VSWVPDPVTG 61
          +P SFS+   LSTLFRRGY TA+ EGVAARI  +M KKEES+R   EK  VSWVPDPVTG
Sbjct: 3  LPSSFST---LSTLFRRGYATASAEGVAARISSIMKKKEESLRIGREKMAVSWVPDPVTG 62

Query: 62 YYRPENCTAEIDAADLRTMLLNPTAK 83
          YYRPENC AE+DAADLR MLLNP  K
Sbjct: 63 YYRPENCGAEMDAADLRAMLLNPATK 85

[Close]

BLAST of Clc10G10300 vs. NCBI nr
Match: XP_022949199.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata] >KAG6606956.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18
Identity = 59/91 (64.84%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 2  MPISFSSVKILS---------TLFRRGY-TAAPEGVAARIGVMMKKEESVRSTEKVSWVP 61
          M  SFS+VKI S         TLFRRGY  AAP+ VAARIG      ++V+STEK SWVP
Sbjct: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAAAPQSVAARIGA-----KTVKSTEKESWVP 60

Query: 62 DPVTGYYRPENCTAEIDAADLRTMLLNPTAK 83
          DPVTGYYRPENC AEIDAADLR MLL  T K
Sbjct: 61 DPVTGYYRPENCAAEIDAADLRAMLLKATRK 86

[Close]

BLAST of Clc10G10300 vs. NCBI nr
Match: XP_023525742.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 98.2 bits (243), Expect = 3.5e-17
Identity = 58/97 (59.79%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 2  MPISFSSVKILS---------TLFRRGYT-------AAPEGVAARIGVMMKKEESVRSTE 61
          M  SFS+VKI S         T+FRRGY        AA +GVAARIG      ++V+STE
Sbjct: 1  MARSFSAVKIASALVSDGLSNTIFRRGYAAVAPQSGAAAKGVAARIGA-----KTVKSTE 60

Query: 62 KVSWVPDPVTGYYRPENCTAEIDAADLRTMLLNPTAK 83
          K SWVPDPVTGYYRPENC AEIDAADLR MLL  T K
Sbjct: 61 KESWVPDPVTGYYRPENCAAEIDAADLRAMLLKATRK 92

[Close]

BLAST of Clc10G10300 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.7e-12
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 5  SFSSVKILSTLFRRGY--TAAPEGVA------ARIGVMMKKEESVRSTEKVSWVPDPVTG 64
          +F S ++ + +FRRGY  TAA   V+      A    +MKK+    ST+K+SWVPDP TG
Sbjct: 13 AFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEESTQKISWVPDPKTG 72

Query: 65 YYRPENCTAEIDAADLRTMLLN 79
          YYRPE  + EIDAA+LR  LLN
Sbjct: 73 YYRPETGSNEIDAAELRAALLN 94

[Close]

BLAST of Clc10G10300 vs. ExPASy Swiss-Prot
Match: P46521 (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-11
Identity = 41/78 (52.56%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 14 TLFRRGYTAAPEGVA----ARIGVMMK-------KEESVRSTEKVS--WVPDPVTGYYRP 73
          ++ RRGY+ AP         R G M K       KE S   T   S  W PDPVTGYYRP
Sbjct: 22 SISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRP 81

Query: 74 ENCTAEIDAADLRTMLLN 79
          ENC AEIDAADLR M+LN
Sbjct: 82 ENCGAEIDAADLREMMLN 99

[Close]

BLAST of Clc10G10300 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 45/94 (47.87%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGYT----------------AAPEGVAARIGVMMKK--EESVRS 61
          M  SF++VK+LS L   G++                +A  G A+  G M+ K  EE VR 
Sbjct: 1  MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRG 60

Query: 62 TEKVSWVPDPVTGYYRPENCTAEIDAADLRTMLL 78
           EKVSWVPDPVTGYYRPEN T EID AD+R  +L
Sbjct: 61 GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVL 93

[Close]

BLAST of Clc10G10300 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 47/99 (47.47%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 2  MPISFSSVKILS---------TLFRRGYTAAPEGVA----ARIGVMMK-------KEESV 61
          M  S SS K+L          ++ RRGY+ AP         R G M K       KE S 
Sbjct: 1  MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 62 RSTEKVS--WVPDPVTGYYRPENCTAEIDAADLRTMLLN 79
            T   S  W PDPVTGYYRPENC AEIDAA+LR MLLN
Sbjct: 61 SETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLN 99

[Close]

BLAST of Clc10G10300 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-11
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 6  FSSVKILSTLFRRGYTAAPEGV--AARIGVMMKKEESVRSTEKVSWVPDPVTGYYRPENC 65
          F S K+ + +FRRG+ AA +     +     MKK     S+EK  WVPDP TGYYRPE  
Sbjct: 14 FGSEKLSNAVFRRGFAAAAKTALDGSVSTAEMKKRAGEASSEKAPWVPDPKTGYYRPETV 73

Query: 66 TAEIDAADLRTMLLN 79
          + EID A+LR +LLN
Sbjct: 74 SEEIDPAELRAILLN 88

[Close]

BLAST of Clc10G10300 vs. ExPASy TrEMBL
Match: A0A5A7TSN1 (Protein SENESCENCE-ASSOCIATED protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001130 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22
Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGY-TAAPEGVAARI-GVMMKKEESVR-STEK--VSWVPDPVTG 61
          +P SFS++  LSTLFRRGY TA+ EGVAARI  +M KKEES+R   EK  VSWVPDPVTG
Sbjct: 3  LPSSFSTLSTLSTLFRRGYATASAEGVAARISSIMKKKEESLRIGREKMAVSWVPDPVTG 62

Query: 62 YYRPENCTAEIDAADLRTMLLNPTAK 83
          YYRPENC AE+DAADLR MLLNPT K
Sbjct: 63 YYRPENCGAEMDAADLRAMLLNPTTK 88

[Close]

BLAST of Clc10G10300 vs. ExPASy TrEMBL
Match: A0A0A0KTB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001850 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.6e-22
Identity = 58/85 (68.24%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGYTAAPEGVAARI-GVMMKKEESV---RSTEKVSWVPDPVTGY 61
          MP  FS++  LS LFRRGY  APEGVAAR+ G+M KKEES+   R  + VSWVPDPVTGY
Sbjct: 1  MPSPFSTLNTLSILFRRGYATAPEGVAARLGGIMKKKEESLRIGREKKAVSWVPDPVTGY 60

Query: 62 YRPENCTAEIDAADLRTMLLNPTAK 83
          YRPENC AE+DAADLR MLLN   K
Sbjct: 61 YRPENCGAEMDAADLRAMLLNSATK 85

[Close]

BLAST of Clc10G10300 vs. ExPASy TrEMBL
Match: A0A5D3E0D0 (SENESCENCE-ASSOCIATED GENE 21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001150 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20
Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGY-TAAPEGVAARI-GVMMKKEESVR-STEK--VSWVPDPVTG 61
          +P SFS+   LSTLFRRGY TA+ EGVAARI  +M KKEES+R   EK  VSWVPDPVTG
Sbjct: 3  LPSSFST---LSTLFRRGYATASAEGVAARISSIMKKKEESLRIGREKMAVSWVPDPVTG 62

Query: 62 YYRPENCTAEIDAADLRTMLLNPTAK 83
          YYRPENC AE+DAADLR MLLNP  K
Sbjct: 63 YYRPENCGAEMDAADLRAMLLNPATK 85

[Close]

BLAST of Clc10G10300 vs. ExPASy TrEMBL
Match: A0A1S3BZK3 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494763 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20
Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 2  MPISFSSVKILSTLFRRGY-TAAPEGVAARI-GVMMKKEESVR-STEK--VSWVPDPVTG 61
          +P SFS+   LSTLFRRGY TA+ EGVAARI  +M KKEES+R   EK  VSWVPDPVTG
Sbjct: 3  LPSSFST---LSTLFRRGYATASAEGVAARISSIMKKKEESLRIGREKMAVSWVPDPVTG 62

Query: 62 YYRPENCTAEIDAADLRTMLLNPTAK 83
          YYRPENC AE+DAADLR MLLNP  K
Sbjct: 63 YYRPENCGAEMDAADLRAMLLNPATK 85

[Close]

BLAST of Clc10G10300 vs. ExPASy TrEMBL
Match: A0A6J1GC45 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452622 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.9e-19
Identity = 59/91 (64.84%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 2  MPISFSSVKILS---------TLFRRGY-TAAPEGVAARIGVMMKKEESVRSTEKVSWVP 61
          M  SFS+VKI S         TLFRRGY  AAP+ VAARIG      ++V+STEK SWVP
Sbjct: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAAAPQSVAARIGA-----KTVKSTEKESWVP 60

Query: 62 DPVTGYYRPENCTAEIDAADLRTMLLNPTAK 83
          DPVTGYYRPENC AEIDAADLR MLL  T K
Sbjct: 61 DPVTGYYRPENCAAEIDAADLRAMLLKATRK 86

[Close]

BLAST of Clc10G10300 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 )

HSP 1 Score: 72.4 bits (176), Expect = 1.9e-13
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 5  SFSSVKILSTLFRRGY--TAAPEGVA------ARIGVMMKKEESVRSTEKVSWVPDPVTG 64
          +F S ++ + +FRRGY  TAA   V+      A    +MKK+    ST+K+SWVPDP TG
Sbjct: 13 AFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEESTQKISWVPDPKTG 72

Query: 65 YYRPENCTAEIDAADLRTMLLN 79
          YYRPE  + EIDAA+LR  LLN
Sbjct: 73 YYRPETGSNEIDAAELRAALLN 94

[Close]

BLAST of Clc10G10300 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 6  FSSVKILSTLFRRGYTAAPEGV--AARIGVMMKKEESVRSTEKVSWVPDPVTGYYRPENC 65
          F S K+ + +FRRG+ AA +     +     MKK     S+EK  WVPDP TGYYRPE  
Sbjct: 14 FGSEKLSNAVFRRGFAAAAKTALDGSVSTAEMKKRAGEASSEKAPWVPDPKTGYYRPETV 73

Query: 66 TAEIDAADLRTMLLN 79
          + EID A+LR +LLN
Sbjct: 74 SEEIDPAELRAILLN 88

[Close]

BLAST of Clc10G10300 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 )

HSP 1 Score: 65.5 bits (158), Expect = 2.3e-11
Identity = 37/70 (52.86%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 17 RRGY--TAAPEGVA------ARIGVMMKKEESVRSTEKVSWVPDPVTGYYRPENCTAEID 76
          +RGY  TAA   V+      A    +MKK+    ST+K+SWVPDP TGYYRPE  + EID
Sbjct: 6  KRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEESTQKISWVPDPKTGYYRPETGSNEID 65

Query: 77 AADLRTMLLN 79
          AA+LR  LLN
Sbjct: 66 AAELRAALLN 75

[Close]

BLAST of Clc10G10300 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 )

HSP 1 Score: 58.2 bits (139), Expect = 3.7e-09
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 13  STLFRRGYTAAPEGVAA---------RIGVMMKKEESVRSTEKVSWVPDPVTGYYRPENC 72
           S + RR Y A  + V A         R+ V   ++  +    + +W PDPVTGYYRP N 
Sbjct: 24  SIVLRRSYVATSQNVTAAGLSKGGSTRVMVGKMEQRGLDQEAESAWGPDPVTGYYRPSNR 83

Query: 73  TAEIDAADLRTMLLNPTAK 83
            AEID A+LR +LL   AK
Sbjct: 84  AAEIDPAELRELLLKNKAK 102

[Close]

BLAST of Clc10G10300 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06
Identity = 24/63 (38.10%), Postives = 35/63 (55.56%), Query Frame = 0


Query: 24  PEGVAARIGVMMKKEESVRST----EKVSWVPDPVTGYYRPENCTAEIDAADLRTMLLNP 83
           PE  A  +   + K   V+      E++ W+PDP TGYYRP+N   E+DA +LR++  N 
Sbjct: 57  PETAAKELDPYIAKTSQVQGKMMRGEELWWMPDPQTGYYRPDNFARELDAVELRSLHFNK 116

The following BLAST results are available for this feature:

BLAST of Clc10G10300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044385.1	8.0e-22	73.26	protein SENESCENCE-ASSOCIATED protein 21 [Cucumis melo var. makuwa]	[more]
XP_011652940.1	1.4e-21	68.24	late embryogenesis abundant protein Lea5-A [Cucumis sativus] >KGN52818.1 hypothe...	[more]
XP_008454329.1	1.3e-19	72.09	PREDICTED: protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucumis me...	[more]
XP_022949199.1	1.8e-18	64.84	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata] >...	[more]
XP_023525742.1	3.5e-17	59.79	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp....	[more]

BLAST of Clc10G10300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WF6	2.7e-12	50.00	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
P46521	1.0e-11	52.56	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]
P32292	1.3e-11	47.87	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P46522	1.3e-11	47.47	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]
Q9SRX6	2.3e-11	48.00	Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2...	[more]

BLAST of Clc10G10300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSN1	3.9e-22	73.26	Protein SENESCENCE-ASSOCIATED protein 21 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KTB8	6.6e-22	68.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001850 PE=4 SV=1	[more]
A0A5D3E0D0	6.2e-20	72.09	SENESCENCE-ASSOCIATED GENE 21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BZK3	6.2e-20	72.09	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucumis melo OX=365...	[more]
A0A6J1GC45	8.9e-19	64.84	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata ...	[more]

BLAST of Clc10G10300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02380.1	1.9e-13	50.00	senescence-associated gene 21	[more]
AT1G02820.1	1.6e-12	48.00	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G02380.2	2.3e-11	52.86	senescence-associated gene 21	[more]
AT4G15910.1	3.7e-09	40.51	drought-induced 21	[more]
AT3G53770.1	1.0e-06	38.10	late embryogenesis abundant 3 (LEA3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PFAM	PF03242	LEA_3	coord: 10..77 e-value: 3.9E-21 score: 75.6
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PANTHER	PTHR33509	LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED	coord: 10..78
None	No IPR available	PANTHER	PTHR33509:SF28	PROTEIN SENESCENCE-ASSOCIATED GENE 21, MITOCHONDRIAL-LIKE	coord: 10..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G10300.1	Clc10G10300.1	mRNA