Clc10G10150 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G10150
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	phytochrome A-associated F-box protein
Location	ClcChr10: 22882108 .. 22883734 (-)
RNA-Seq Expression	Clc10G10150
Synteny	Clc10G10150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATTCCCTCTTCTCTTCCCTTCCCGATGACATTCTTCTCAACATCTTCTTCAAACTCGAAGACGATCCCCGTAACTGGGCTCGATTAGCTTGTGTTTCCACCAAATTCTCCTCTACAATCCGTAACATCTGCTGGAAAACCAAGTGTTCTAACTCCATCCCTTCTCTCGTTGCTGATCTTCTCGTCGGCGACTCTATTCCCGCCGGTGGATGGGCTTCCCTTCATAAGCTCGCTGTCTGTTGTCCAGGTCTCGTCCATTCCGGTGTTCTTCTCGAGAATTCTGATTTTGGGCTCGAACGCGAGCTGGGTCCTGATGAAAACTACGTGAAATTGGGGTTATCCAACCACCCAGAACCTGAATCCGACCCTTCTACTGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCCTCTGATTGTGCTTGGTCTCTTTACGATGATCTGTATCTCGATACTATGTATAACGATTCTGAAGTCCCTGATGTTCTCGACCCTCAAATCGGTGTTACCAAAGTGGAGAAAGGGGTTTTTATGGCGGATAGGGAATTTTGTGTTTCGAAGAGGAGGAAGATCTGTAGGTCTATGAGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTACGGAGCCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCACATTGAAGAGAAGCGGAATTACATGCTTTTCAGAGGGATTTTCAAGAACTTCAAAGGATCTCATGTTTGGAGAACGATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGCTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAACCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTCACTTCTGCTTTTGCTTCTCATTCCTCATTCAATTCCATAAAGAACACTAGAAAGAAATGGAGGCAATGTTTTGGTAGTTCTTATGTCTATAATTTAATATCATTTTATTGCTTAACTTCTTTCCTTTTTTTTGCCTGTTTTCATGAATTGGACATGAGGTTCCCATTAAAACCATTGCTATAGGTTTCATCTCTGAGTTCTTATATTACCTTTAAGAGGCTTATACATTTGAGTTGGACATGTTTCATTTATCAGTAGCTGCTAAGGAAACATAACAAGCTGAGACGTTCTGAAGAGAAGATATTTAGAGGAAAATTGCAGTTAAAAGATGGGGCATAGCATAGCTTCAACCTTGGAGGATGATGGGGAGTTCCAATGGAGCATTACTTATGAGATAAGTAGAAAAAAAAAAAAAAACCTTGGTATTTTGTGCTTATAATCCGTTGTTTGTATATGATGAATTTATTTGTTAGTGGGAGTATTGTTTCCCAACTACTTAATTTAATGAAAGAATTGCTAAAAGACTATGTTCTGAGATTTGTAGGGCCAACCAAACTAGGTCTGGATAATCTCTCTAGTGTTTTCAGGGTGAGTTTAGTGATTCTTCTATATGCACTTTTGGTAGAACACTAG

mRNA sequence

ATGGCCGATTCCCTCTTCTCTTCCCTTCCCGATGACATTCTTCTCAACATCTTCTTCAAACTCGAAGACGATCCCCGTAACTGGGCTCGATTAGCTTGTGTTTCCACCAAATTCTCCTCTACAATCCGTAACATCTGCTGGAAAACCAAGTGTTCTAACTCCATCCCTTCTCTCGTTGCTGATCTTCTCGTCGGCGACTCTATTCCCGCCGGTGGATGGGCTTCCCTTCATAAGCTCGCTGTCTGTTGTCCAGGTCTCGTCCATTCCGGTGTTCTTCTCGAGAATTCTGATTTTGGGCTCGAACGCGAGCTGGGTCCTGATGAAAACTACGTGAAATTGGGGTTATCCAACCACCCAGAACCTGAATCCGACCCTTCTACTGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCCTCTGATTGTGCTTGGTCTCTTTACGATGATCTGTATCTCGATACTATGTATAACGATTCTGAAGTCCCTGATGTTCTCGACCCTCAAATCGGTGTTACCAAAGTGGAGAAAGGGGTTTTTATGGCGGATAGGGAATTTTGTGTTTCGAAGAGGAGGAAGATCTGTAGGTCTATGAGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTACGGAGCCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCACATTGAAGAGAAGCGGAATTACATGCTTTTCAGAGGGATTTTCAAGAACTTCAAAGGATCTCATGTTTGGAGAACGATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGCTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAACCAGTTGTTCGAGCTTATGTCTGGCCAACCAAACTAGGTCTGGATAATCTCTCTAGTGTTTTCAGGGTGAGTTTAGTGATTCTTCTATATGCACTTTTGGTAGAACACTAG

Coding sequence (CDS)

ATGGCCGATTCCCTCTTCTCTTCCCTTCCCGATGACATTCTTCTCAACATCTTCTTCAAACTCGAAGACGATCCCCGTAACTGGGCTCGATTAGCTTGTGTTTCCACCAAATTCTCCTCTACAATCCGTAACATCTGCTGGAAAACCAAGTGTTCTAACTCCATCCCTTCTCTCGTTGCTGATCTTCTCGTCGGCGACTCTATTCCCGCCGGTGGATGGGCTTCCCTTCATAAGCTCGCTGTCTGTTGTCCAGGTCTCGTCCATTCCGGTGTTCTTCTCGAGAATTCTGATTTTGGGCTCGAACGCGAGCTGGGTCCTGATGAAAACTACGTGAAATTGGGGTTATCCAACCACCCAGAACCTGAATCCGACCCTTCTACTGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCCTCTGATTGTGCTTGGTCTCTTTACGATGATCTGTATCTCGATACTATGTATAACGATTCTGAAGTCCCTGATGTTCTCGACCCTCAAATCGGTGTTACCAAAGTGGAGAAAGGGGTTTTTATGGCGGATAGGGAATTTTGTGTTTCGAAGAGGAGGAAGATCTGTAGGTCTATGAGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTACGGAGCCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCACATTGAAGAGAAGCGGAATTACATGCTTTTCAGAGGGATTTTCAAGAACTTCAAAGGATCTCATGTTTGGAGAACGATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGCTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAACCAGTTGTTCGAGCTTATGTCTGGCCAACCAAACTAGGTCTGGATAATCTCTCTAGTGTTTTCAGGGTGAGTTTAGTGATTCTTCTATATGCACTTTTGGTAGAACACTAG

Protein sequence

MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVWPTKLGLDNLSSVFRVSLVILLYALLVEH

Homology

[Close]

BLAST of Clc10G10150 vs. NCBI nr
Match: XP_016901491.1 (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 630.9 bits (1626), Expect = 6.2e-177
Identity = 301/316 (95.25%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MADSLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN+IPSLV+
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S H +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTK 180
           PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240
           VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYV 313
           VFGYHDDGEPVVRAYV
Sbjct: 301 VFGYHDDGEPVVRAYV 316

[Close]

BLAST of Clc10G10150 vs. NCBI nr
Match: XP_038905727.1 (phytochrome A-associated F-box protein [Benincasa hispida])

HSP 1 Score: 630.6 bits (1625), Expect = 8.1e-177
Identity = 300/320 (93.75%), Postives = 307/320 (95.94%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MADSLFS+LPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN+IPSLVA
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVA 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KL  S++PE
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLCSSHNPE 120

Query: 121 PESDPSTALFEVNSDL--------SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQI 180
           PESDPSTALFEVNSDL        SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQI
Sbjct: 121 PESDPSTALFEVNSDLSASASASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQI 180

Query: 181 GVTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYIC 240
           GVTKVEKGVFM D++FCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYIC
Sbjct: 181 GVTKVEKGVFMTDKDFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYIC 240

Query: 241 DWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAF 300
           DWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNR KIDLNCAFCSCKETWDLHSAF
Sbjct: 241 DWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRKKIDLNCAFCSCKETWDLHSAF 300

Query: 301 CLRRVFGYHDDGEPVVRAYV 313
           CLRRVFGYHDDGEPVVRAYV
Sbjct: 301 CLRRVFGYHDDGEPVVRAYV 320

[Close]

BLAST of Clc10G10150 vs. NCBI nr
Match: KAA0044375.1 (phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 628.2 bits (1619), Expect = 4.0e-176
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MA SLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN+IPSLV+
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S H +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTK 180
           PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240
           VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYV 313
           VFGYHDDGEPVVRAYV
Sbjct: 301 VFGYHDDGEPVVRAYV 316

[Close]

BLAST of Clc10G10150 vs. NCBI nr
Match: XP_011652932.1 (phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypothetical protein Csa_014680 [Cucumis sativus])

HSP 1 Score: 624.0 bits (1608), Expect = 7.6e-175
Identity = 298/317 (94.01%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MADSLFS+LPDDILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSN+IPSLV+
Sbjct: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S + +
Sbjct: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165

Query: 121 PESDP-STALFEVNSDL----SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVT 180
           PES+P STALFEVNSDL    SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG T
Sbjct: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225

Query: 181 KVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240
           KVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP
Sbjct: 226 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 285

Query: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300
           GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Sbjct: 286 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 345

Query: 301 RVFGYHDDGEPVVRAYV 313
           RVFGYHDDGEPVVRAYV
Sbjct: 346 RVFGYHDDGEPVVRAYV 362

[Close]

BLAST of Clc10G10150 vs. NCBI nr
Match: XP_022155270.1 (phytochrome A-associated F-box protein isoform X1 [Momordica charantia])

HSP 1 Score: 584.3 bits (1505), Expect = 6.6e-163
Identity = 273/312 (87.50%), Postives = 292/312 (93.59%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MA+S FS+LP+D+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS +IPSL+A
Sbjct: 48  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 107

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  S HP+
Sbjct: 108 DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 167

Query: 121 PESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTKVEKG 180
           P++D     F+VNSD SASAS SDCAWSLYDDLYLDT+YNDSE PDV DPQIG TKVEKG
Sbjct: 168 PDTDTQ---FQVNSDFSASAS-SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKG 227

Query: 181 VFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHI 240
           VFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHI
Sbjct: 228 VFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHI 287

Query: 241 EEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGY 300
           EEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGY
Sbjct: 288 EEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY 347

Query: 301 HDDGEPVVRAYV 313
           HDDGEPVVRAYV
Sbjct: 348 HDDGEPVVRAYV 355

[Close]

BLAST of Clc10G10150 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2)

HSP 1 Score: 399.1 bits (1024), Expect = 5.2e-110
Identity = 197/329 (59.88%), Postives = 235/329 (71.43%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFSS +RN+C KT+C ++IP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 120
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDENYVKLGLSNHPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEV 180
           GPD+N         P+P +       E  S    S   +   WSLYDDLY DT+      
Sbjct: 121 GPDQNL-------DPKPTTTDLALNDEEVSKPVGSGLETTSFWSLYDDLYTDTIPAPPPE 180

Query: 181 PDVLDPQIGVTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRF 240
             + D +    ++E       R+  V KRRKICRS+ SHLASG WNLSREQGNKLL SRF
Sbjct: 181 DSIDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRF 240

Query: 241 RGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFCSCK 300
           RGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C 
Sbjct: 241 RGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCD 300

Query: 301 ETWDLHSAFCLRRVFGYHDDGEPVVRAYV 313
           ETWDLHS+FCLRRVFG+HDDGEPVVRAYV
Sbjct: 301 ETWDLHSSFCLRRVFGFHDDGEPVVRAYV 319

[Close]

BLAST of Clc10G10150 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.7e-05
Identity = 27/84 (32.14%), Postives = 40/84 (47.62%), Query Frame = 0


Query: 9   LPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVADL-LVGDS 68
           L +D+LL +F  L  +P+  A L+CV   F    + + WK  C    P ++ DL   G  
Sbjct: 22  LNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGSH 81

Query: 69  IPAGGWASLHKLAVCCPGLVHSGV 92
              G W +L KL + C G    G+
Sbjct: 82  CIDGNWRALGKLLIYCSGCTQGGL 105

[Close]

BLAST of Clc10G10150 vs. ExPASy TrEMBL
Match: A0A5D3E0Q4 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001020 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.0e-177
Identity = 301/316 (95.25%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MADSLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN+IPSLV+
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S H +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTK 180
           PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240
           VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYV 313
           VFGYHDDGEPVVRAYV
Sbjct: 301 VFGYHDDGEPVVRAYV 316

[Close]

BLAST of Clc10G10150 vs. ExPASy TrEMBL
Match: A0A1S4DZU2 (phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.0e-177
Identity = 301/316 (95.25%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MADSLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN+IPSLV+
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S H +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTK 180
           PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240
           VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYV 313
           VFGYHDDGEPVVRAYV
Sbjct: 301 VFGYHDDGEPVVRAYV 316

[Close]

BLAST of Clc10G10150 vs. ExPASy TrEMBL
Match: A0A5A7TSM0 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001020 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.9e-176
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MA SLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN+IPSLV+
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S H +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTK 180
           PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240
           VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYV 313
           VFGYHDDGEPVVRAYV
Sbjct: 301 VFGYHDDGEPVVRAYV 316

[Close]

BLAST of Clc10G10150 vs. ExPASy TrEMBL
Match: A0A0A0KWJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.7e-175
Identity = 298/317 (94.01%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MADSLFS+LPDDILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSN+IPSLV+
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENY+KLG S + +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 121 PESDP-STALFEVNSDL----SASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVT 180
           PES+P STALFEVNSDL    SASASASDCAWSLYDDLYLDTMYNDSE PDVLDPQIG T
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 181 KVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240
           KVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300
           GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 301 RVFGYHDDGEPVVRAYV 313
           RVFGYHDDGEPVVRAYV
Sbjct: 301 RVFGYHDDGEPVVRAYV 317

[Close]

BLAST of Clc10G10150 vs. ExPASy TrEMBL
Match: A0A6J1DLZ5 (phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.2e-163
Identity = 273/312 (87.50%), Postives = 292/312 (93.59%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MA+S FS+LP+D+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS +IPSL+A
Sbjct: 48  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 107

Query: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYVKLGLSNHPE 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  S HP+
Sbjct: 108 DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 167

Query: 121 PESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEVPDVLDPQIGVTKVEKG 180
           P++D     F+VNSD SASAS SDCAWSLYDDLYLDT+YNDSE PDV DPQIG TKVEKG
Sbjct: 168 PDTDTQ---FQVNSDFSASAS-SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKG 227

Query: 181 VFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHI 240
           VFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHI
Sbjct: 228 VFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHI 287

Query: 241 EEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGY 300
           EEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGY
Sbjct: 288 EEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY 347

Query: 301 HDDGEPVVRAYV 313
           HDDGEPVVRAYV
Sbjct: 348 HDDGEPVVRAYV 355

[Close]

BLAST of Clc10G10150 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein )

HSP 1 Score: 399.1 bits (1024), Expect = 3.7e-111
Identity = 197/329 (59.88%), Postives = 235/329 (71.43%), Query Frame = 0


Query: 1   MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVA 60
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFSS +RN+C KT+C ++IP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 120
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDENYVKLGLSNHPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEV 180
           GPD+N         P+P +       E  S    S   +   WSLYDDLY DT+      
Sbjct: 121 GPDQNL-------DPKPTTTDLALNDEEVSKPVGSGLETTSFWSLYDDLYTDTIPAPPPE 180

Query: 181 PDVLDPQIGVTKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRF 240
             + D +    ++E       R+  V KRRKICRS+ SHLASG WNLSREQGNKLL SRF
Sbjct: 181 DSIDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRF 240

Query: 241 RGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFCSCK 300
           RGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C 
Sbjct: 241 RGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCD 300

Query: 301 ETWDLHSAFCLRRVFGYHDDGEPVVRAYV 313
           ETWDLHS+FCLRRVFG+HDDGEPVVRAYV
Sbjct: 301 ETWDLHSSFCLRRVFGFHDDGEPVVRAYV 319

[Close]

BLAST of Clc10G10150 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 )

HSP 1 Score: 51.2 bits (121), Expect = 1.9e-06
Identity = 27/84 (32.14%), Postives = 40/84 (47.62%), Query Frame = 0


Query: 9   LPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNSIPSLVADL-LVGDS 68
           L +D+LL +F  L  +P+  A L+CV   F    + + WK  C    P ++ DL   G  
Sbjct: 22  LNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGSH 81

Query: 69  IPAGGWASLHKLAVCCPGLVHSGV 92
              G W +L KL + C G    G+
Sbjct: 82  CIDGNWRALGKLLIYCSGCTQGGL 105

The following BLAST results are available for this feature:

BLAST of Clc10G10150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901491.1	6.2e-177	95.25	PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phy...	[more]
XP_038905727.1	8.1e-177	93.75	phytochrome A-associated F-box protein [Benincasa hispida]	[more]
KAA0044375.1	4.0e-176	94.94	phytochrome A-associated F-box protein [Cucumis melo var. makuwa]	[more]
XP_011652932.1	7.6e-175	94.01	phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypotheti...	[more]
XP_022155270.1	6.6e-163	87.50	phytochrome A-associated F-box protein isoform X1 [Momordica charantia]	[more]

BLAST of Clc10G10150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEA8	5.2e-110	59.88	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 P...	[more]
Q9LF38	2.7e-05	32.14	EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1	[more]

BLAST of Clc10G10150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0Q4	3.0e-177	95.25	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DZU2	3.0e-177	95.25	phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 P...	[more]
A0A5A7TSM0	1.9e-176	94.94	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KWJ3	3.7e-175	94.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1	[more]
A0A6J1DLZ5	3.2e-163	87.50	phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of Clc10G10150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02440.1	3.7e-111	59.88	F-box family protein	[more]
AT5G15440.1	1.9e-06	32.14	EID1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 7..51 e-value: 4.5E-6 score: 26.4
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 3..312
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 3..312
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 4..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G10150.2	Clc10G10150.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0010099	regulation of photomorphogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding