Clc10G10080 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G10080
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Location	ClcChr10: 22725939 .. 22728729 (+)
RNA-Seq Expression	Clc10G10080
Synteny	Clc10G10080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAACCGACCTTTCTCGTCCCAATTCCCAAGTCAAATTCCTTAGAAAAAGGAAAATCTCAAGTCAAATCAATTTCAAAATCTTCTCAACCAAACGGTATATCAATTTTCCTCTTTCTCATATATATATATATTTGTTTTCGGGCTACTTTAGTCTTACAAACACATTTCATCTTCACAAATAAGATCATTCCTTTCAATTTTCCTTCCCTTTTATGAATAAACCTCGTGATTAAGGCTCGAACTGCAGAGCTACAACAGTAAATGAATGAATATTTCTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGTCAATCGGCATCAGCCGCCGGAAAACTCCATTCTCAGATCATCAAAGCCGGTTTACTCAAATCGGGTCCTCTCCCAAACACCCTTTTGGATGTTTATGGCAAATGCGGTCTCATTCCACAAGCCCTCCAACTGTTCGACGAAATGCCCCACAGAGACCATGTCTCCTGGGCCTCGATTCTCACTGCCCATAACCAAGCCATTCTTCCCCGACGGGCCCTTTCAATGCTTGACATCATGTTTACGGTCGATGGGTTGCAGCCTGATCACTTTGTCTTCGCCTGCATTGTCAGGGCCTGTGCCAGTTTGGGGTATTTGCGGCTAGGTAAGCAAGTCCATGCTCGGTTTATGCTGTCTTCTTTTTGTGATGATGAAGTTGTTAAGTCGTCTTTGATCGATATGTATGCTAAATGTGCGCAACCCGATGATGCTCGGGCCGTTTTTGATTCCATATTGTTTAAGAATTCCGTTTCCTGGACTGCTATGATTTCTGGGTATGCTAGAAGTGGGAGAAAATGTGAGGCTATTGAGCTTTTTCAGCGAGTTCCTGTGAGAAACTTGTTTTCTTGGACTGCTTTGATTTCGGGGTTGATTCAAAGTGGGAATGGAATTTACTCCTTATCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATATTGTAGACCCTTTAGTTCTTTCGAGTGTTGTTGGAGCTTGTGCAAATTTAGCTCTTCTGGAGCTTGGAAAGCAAATTCATGGCTTGGTCATAGCTTTTGGCTTTGAGTCTTGTTTGTTTATAAGCAATGCACTCGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGATATCTTTTACAGAATGCCACGAAAGGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGTAAGGCGGAGGAGGCATTGACTTTATATGATGAGATGGTTCTTTCCAGAATAAAGCCAAATGAAGTGACTTTCGTTGGGTTACTTTATGCTTGCAGTCACGTCGGGTTAGTTAGCAGAGGTCGCGAATTATTTAGGTCTATGTCAACTGATTACAAGATTAATCCTTCTCTCCAGCACTATACATGTTTATTGGATCTCCTGAGTCGCTCCGGACACCTTGATGAGGCAGAGAATCTACTCAATGAAATGCCATTTAAACCCGATGAGCCTACTTGGGCATCGTTATTGAGCGCATGCAAGCGGCATAATAATTTGAAAATGGGAGTTCGAATTGCTGATCATGTGTTGGATTTGAAACCTGAAGATCCTTCGACATACATACTCTTATCGAACGTTTACGCTGGAGCTGAAATGTGGGAAAGTGTTTCAAAGGTGAGAAAGTTGATGAGTTCTATGGAAGTAAGAAAGGAACCAGGTTATAGCAGCATTGACCTTGGAAAGGAGAGCCAAGTATTTCATGCTGGGGAGAGTTGTCATCCTATGAAGGATGAGATTTTCAATCTACTGAAGGATTTAGATGCAGAAATGAGAAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAGCAACAAGAGAAGGAAAAGCAGCTCTTTTGGCATAGTGAGAGGTTGGCTGTGGCTTATGGACTTCTCAAGGCTGTTCCTGGGACGGTTATTCGAATTGTGAAAAACCTTCGCATTTGTGGAGATTGTCATAACGTTTTGAAATTCACTAGTGATATAAAACAAAGAGAAATTGTGGTCCGTGATGCCACGAGATATCATCATTTCAAGGAAGGAAAATGTTCTTGCAATGATTTCTGGTGACTCTGGGTAAATTTGTGGGATCCTCTTCTACTTATCTCGACAATTCTTTGGCCAAAAAGGTATGAAGTGGTGAAGTTCTTCAAAATACTTTTCGGTATTGTGTGTTGTGTTTTATAGAAGATAAAGCATCTCCCTCCAATTTATTAGAAATAGCATTTAGAAGAAAGATTTAAACATCCCGGAGATAAAGGCCCATTGAACATTCTGCATAAATGAAGCCACCATTTGGCCACAATCAAATTAATGAAGGCTGATAACTCGAAGGATTCATATAAAGGATGAGATTTTCACATCTGGAGAAGAGGCTGCTGATCCTAATATTACTTATATTTGGCAAACTGGAGACAGAGATTATGGGCTAGATCTTACCAGCACCGGAGGTTTACTAACCGATGAATGGTTGAAACTGCACAGATAATTCTAATTGTGTAGAGAATCGGTATCAGATACGTATCTAGTACGGATACATGCCCAATATGTGATTTGAAGTATATTATTTTTTTTATTCTTTTTTTTAATTTGCAGATAAGCTTATCCCATTCCAGATACGTGAAGGGGATACGTTGGGTCGTTTTTTTCTTCCAAATGTAAGCCCAACCCACAACCCGTTTTATTTAAAAGTCCACTTAAATCTAGCGATGCAAAACTAAAAAGATTAAAAATCTTCCTTCTCTTCTTTCTCA

mRNA sequence

AAAAAAAAAAAAACCGACCTTTCTCGTCCCAATTCCCAAGTCAAATTCCTTAGAAAAAGGAAAATCTCAAGTCAAATCAATTTCAAAATCTTCTCAACCAAACGGTATATCAATTTTCCTCTTTCTCATATATATATATATTTGTTTTCGGGCTACTTTAGTCTTACAAACACATTTCATCTTCACAAATAAGATCATTCCTTTCAATTTTCCTTCCCTTTTATGAATAAACCTCGTGATTAAGGCTCGAACTGCAGAGCTACAACAGTAAATGAATGAATATTTCTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGTCAATCGGCATCAGCCGCCGGAAAACTCCATTCTCAGATCATCAAAGCCGGTTTACTCAAATCGGGTCCTCTCCCAAACACCCTTTTGGATGTTTATGGCAAATGCGGTCTCATTCCACAAGCCCTCCAACTGTTCGACGAAATGCCCCACAGAGACCATGTCTCCTGGGCCTCGATTCTCACTGCCCATAACCAAGCCATTCTTCCCCGACGGGCCCTTTCAATGCTTGACATCATGTTTACGGTCGATGGGTTGCAGCCTGATCACTTTGTCTTCGCCTGCATTGTCAGGGCCTGTGCCAGTTTGGGGTATTTGCGGCTAGGTAAGCAAGTCCATGCTCGGTTTATGCTGTCTTCTTTTTGTGATGATGAAGTTGTTAAGTCGTCTTTGATCGATATGTATGCTAAATGTGCGCAACCCGATGATGCTCGGGCCGTTTTTGATTCCATATTGTTTAAGAATTCCGTTTCCTGGACTGCTATGATTTCTGGGTATGCTAGAAGTGGGAGAAAATGTGAGGCTATTGAGCTTTTTCAGCGAGTTCCTGTGAGAAACTTGTTTTCTTGGACTGCTTTGATTTCGGGGTTGATTCAAAGTGGGAATGGAATTTACTCCTTATCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATATTGTAGACCCTTTAGTTCTTTCGAGTGTTGTTGGAGCTTGTGCAAATTTAGCTCTTCTGGAGCTTGGAAAGCAAATTCATGGCTTGGTCATAGCTTTTGGCTTTGAGTCTTGTTTGTTTATAAGCAATGCACTCGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGATATCTTTTACAGAATGCCACGAAAGGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGTAAGGCGGAGGAGGCATTGACTTTATATGATGAGATGGTTCTTTCCAGAATAAAGCCAAATGAAGTGACTTTCGTTGGGTTACTTTATGCTTGCAGTCACGTCGGGTTAGTTAGCAGAGGTCGCGAATTATTTAGGTCTATGTCAACTGATTACAAGATTAATCCTTCTCTCCAGCACTATACATGTTTATTGGATCTCCTGAGTCGCTCCGGACACCTTGATGAGGCAGAGAATCTACTCAATGAAATGCCATTTAAACCCGATGAGCCTACTTGGGCATCGTTATTGAGCGCATGCAAGCGGCATAATAATTTGAAAATGGGAGTTCGAATTGCTGATCATGTGTTGGATTTGAAACCTGAAGATCCTTCGACATACATACTCTTATCGAACGTTTACGCTGGAGCTGAAATGTGGGAAAGTGTTTCAAAGGTGAGAAAGTTGATGAGTTCTATGGAAGTAAGAAAGGAACCAGGTTATAGCAGCATTGACCTTGGAAAGGAGAGCCAAGTATTTCATGCTGGGGAGAGTTGTCATCCTATGAAGGATGAGATTTTCAATCTACTGAAGGATTTAGATGCAGAAATGAGAAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAGCAACAAGAGAAGGAAAAGCAGCTCTTTTGGCATAGTGAGAGGTTGGCTGTGGCTTATGGACTTCTCAAGGCTGTTCCTGGGACGGTTATTCGAATTGTGAAAAACCTTCGCATTTGTGGAGATTGTCATAACGTTTTGAAATTCACTAGTGATATAAAACAAAGAGAAATTGTGGTCCGTGATGCCACGAGATATCATCATTTCAAGGAAGGAAAATGTTCTTGCAATGATTTCTGGTGACTCTGGGTAAATTTGTGGGATCCTCTTCTACTTATCTCGACAATTCTTTGGCCAAAAAGAAATAGCATTTAGAAGAAAGATTTAAACATCCCGGAGATAAAGGCCCATTGAACATTCTGCATAAATGAAGCCACCATTTGGCCACAATCAAATTAATGAAGGCTGATAACTCGAAGGATTCATATAAAGGATGAGATTTTCACATCTGGAGAAGAGGCTGCTGATCCTAATATTACTTATATTTGGCAAACTGGAGACAGAGATTATGGGCTAGATCTTACCAGCACCGGAGGTTTACTAACCGATGAATGGTTGAAACTGCACAGATAATTCTAATTGTGTAGAGAATCGGTATCAGATACGTATCTAGTACGGATACATGCCCAATATGTGATTTGAAGTATATTATTTTTTTTATTCTTTTTTTTAATTTGCAGATAAGCTTATCCCATTCCAGATACGTGAAGGGGATACGTTGGGTCGTTTTTTTCTTCCAAATGTAAGCCCAACCCACAACCCGTTTTATTTAAAAGTCCACTTAAATCTAGCGATGCAAAACTAAAAAGATTAAAAATCTTCCTTCTCTTCTTTCTCA

Coding sequence (CDS)

ATGAATATTTCTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGTCAATCGGCATCAGCCGCCGGAAAACTCCATTCTCAGATCATCAAAGCCGGTTTACTCAAATCGGGTCCTCTCCCAAACACCCTTTTGGATGTTTATGGCAAATGCGGTCTCATTCCACAAGCCCTCCAACTGTTCGACGAAATGCCCCACAGAGACCATGTCTCCTGGGCCTCGATTCTCACTGCCCATAACCAAGCCATTCTTCCCCGACGGGCCCTTTCAATGCTTGACATCATGTTTACGGTCGATGGGTTGCAGCCTGATCACTTTGTCTTCGCCTGCATTGTCAGGGCCTGTGCCAGTTTGGGGTATTTGCGGCTAGGTAAGCAAGTCCATGCTCGGTTTATGCTGTCTTCTTTTTGTGATGATGAAGTTGTTAAGTCGTCTTTGATCGATATGTATGCTAAATGTGCGCAACCCGATGATGCTCGGGCCGTTTTTGATTCCATATTGTTTAAGAATTCCGTTTCCTGGACTGCTATGATTTCTGGGTATGCTAGAAGTGGGAGAAAATGTGAGGCTATTGAGCTTTTTCAGCGAGTTCCTGTGAGAAACTTGTTTTCTTGGACTGCTTTGATTTCGGGGTTGATTCAAAGTGGGAATGGAATTTACTCCTTATCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATATTGTAGACCCTTTAGTTCTTTCGAGTGTTGTTGGAGCTTGTGCAAATTTAGCTCTTCTGGAGCTTGGAAAGCAAATTCATGGCTTGGTCATAGCTTTTGGCTTTGAGTCTTGTTTGTTTATAAGCAATGCACTCGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGATATCTTTTACAGAATGCCACGAAAGGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGTAAGGCGGAGGAGGCATTGACTTTATATGATGAGATGGTTCTTTCCAGAATAAAGCCAAATGAAGTGACTTTCGTTGGGTTACTTTATGCTTGCAGTCACGTCGGGTTAGTTAGCAGAGGTCGCGAATTATTTAGGTCTATGTCAACTGATTACAAGATTAATCCTTCTCTCCAGCACTATACATGTTTATTGGATCTCCTGAGTCGCTCCGGACACCTTGATGAGGCAGAGAATCTACTCAATGAAATGCCATTTAAACCCGATGAGCCTACTTGGGCATCGTTATTGAGCGCATGCAAGCGGCATAATAATTTGAAAATGGGAGTTCGAATTGCTGATCATGTGTTGGATTTGAAACCTGAAGATCCTTCGACATACATACTCTTATCGAACGTTTACGCTGGAGCTGAAATGTGGGAAAGTGTTTCAAAGGTGAGAAAGTTGATGAGTTCTATGGAAGTAAGAAAGGAACCAGGTTATAGCAGCATTGACCTTGGAAAGGAGAGCCAAGTATTTCATGCTGGGGAGAGTTGTCATCCTATGAAGGATGAGATTTTCAATCTACTGAAGGATTTAGATGCAGAAATGAGAAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAGCAACAAGAGAAGGAAAAGCAGCTCTTTTGGCATAGTGAGAGGTTGGCTGTGGCTTATGGACTTCTCAAGGCTGTTCCTGGGACGGTTATTCGAATTGTGAAAAACCTTCGCATTTGTGGAGATTGTCATAACGTTTTGAAATTCACTAGTGATATAAAACAAAGAGAAATTGTGGTCCGTGATGCCACGAGATATCATCATTTCAAGGAAGGAAAATGTTCTTGCAATGATTTCTGGTGA

Protein sequence

MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFKEGKCSCNDFW

Homology

[Close]

BLAST of Clc10G10080 vs. NCBI nr
Match: XP_038903469.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Benincasa hispida])

HSP 1 Score: 1199.5 bits (3102), Expect = 0.0e+00
Identity = 586/610 (96.07%), Postives = 596/610 (97.70%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNISHFLHELQLC RRQSASAAGKLHSQIIKAG  KSGPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHELQLCTRRQSASAAGKLHSQIIKAGFEKSGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMP RDHVSWASILTAHNQAILPRR LSML+ MFT+DGLQPDHFVFACIVRACASLGY
Sbjct: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLNTMFTLDGLQPDHFVFACIVRACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YARSGRKCEAIELFQRVP+RNLFSWTALISGLIQSGNGIYS SLFNEMRREGIDIVDPLV
Sbjct: 181 YARSGRKCEAIELFQRVPMRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
           LSSVVGACANLALLELGKQIHGLVIA GFESCL+ISNA VDMYAKCSD+LAAKDIFYRMP
Sbjct: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLYISNAFVDMYAKCSDLLAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSR+KPNEVTF+GLLYACSHVGLVSRGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRVKPNEVTFIGLLYACSHVGLVSRGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DY+INPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS
Sbjct: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGESCH MKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDME QEKEKQLF
Sbjct: 481 IDFGKESQVFHAGESCHLMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEPQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLAVAYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDIKQREIVVRDATRYHHFK
Sbjct: 541 WHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIKQREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           EGKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. NCBI nr
Match: XP_022948359.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1161.7 bits (3004), Expect = 0.0e+00
Identity = 566/610 (92.79%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAGL K+GPL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLANTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRR LSML IMFT DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQRVPVRNLFSWTALISGLIQSGNGIYS SLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
            SSVVGACANLALLELGKQ+HGLVIA GFESCLFISN LVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DYKINPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKP+DPSTYILLSNVYAGAEMWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+ HPMKDEIF+LLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. NCBI nr
Match: XP_022998145.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 566/610 (92.79%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAGL K+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRR LSML IMFT DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQRVPVRNLFSWTALISGLIQSGNGIYS SLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
            SSVVGACANLALLELGKQIHGLVIA GFESCLFISNALVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DYKINPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKPEDPSTYILLSNVYAGAEMW+SVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+ HPMK+EIF+LLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. NCBI nr
Match: XP_023523455.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 564/610 (92.46%), Postives = 587/610 (96.23%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAG  K+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGFDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRR LSML IMFT DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTRDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQRVPVRNLFSWTALISGLIQSGNGIYS SLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
            SSVVGACANLALLELGKQ+HGLVIA GFESCLFISN LVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DYKINPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKPEDPSTY+LLSNVYAGA MWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYVLLSNVYAGAGMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+ HPMKDEIF+LLKDLDAEMRRRGYVPNTSFVLHDM QQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMVQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. NCBI nr
Match: KAG6606966.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 564/610 (92.46%), Postives = 587/610 (96.23%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAGL K+ PL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLGKASPLTNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRR LSML IM T DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLGIMLTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQRVPVRNLFSWTALISGLIQSGNGIYS SLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
            SSVVGACANLALLELGKQ+HGLVIA GFESCLFISN LVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DYKINPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKP+DPSTYILLSNVYAGAEMWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+ HPMKDEIF+LLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. ExPASy Swiss-Prot
Match: O23266 (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H13 PE=1 SV=3)

HSP 1 Score: 865.5 bits (2235), Expect = 3.5e-250
Identity = 407/612 (66.50%), Postives = 508/612 (83.01%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           M I H+LH+LQLCAR ++ + A  LH+ I+K G+++  PL NTL++VYGKCG    ALQ+
Sbjct: 1   MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDH++WAS+LTA NQA L  + LS+   + +  GL+PD FVF+ +V+ACA+LG 
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           +  G+QVH  F++S + +DEVVKSSL+DMYAKC   + A+AVFDSI  KN++SWTAM+SG
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK EA+ELF+ +PV+NL+SWTALISG +QSG G+ + S+F EMRRE +DI+DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
           LSS+VGACANLA    G+Q+HGLVIA GF+SC+FISNAL+DMYAKCSD++AAKDIF RM 
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
            +DV+SWTS+IVG AQHG+AE+AL LYD+MV   +KPNEVTFVGL+YACSHVG V +GRE
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LF+SM+ DY I PSLQHYTCLLDLL RSG LDEAENL++ MPF PDEPTWA+LLSACKR 
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420

Query: 421 NNLKMGVRIADH-VLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYS 480
              +MG+RIADH V   K +DPSTYILLSN+YA A +W  VS+ R+ +  MEVRK+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480

Query: 481 SIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMR-RRGYVPNTSFVLHDMEQQEKEKQ 540
           S+++ KE++VF+AGE+ HP+K++IF LLK L+ EMR R GYVP+TS++LHDM++QEKEK 
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540

Query: 541 LFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHH 600
           LFWHSER AVAYGLLKAVPGT IRIVKNLR+CGDCH VLK  S+I +REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600

Query: 601 FKEGKCSCNDFW 611
           FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612

[Close]

BLAST of Clc10G10080 vs. ExPASy Swiss-Prot
Match: Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 5.8e-136
Identity = 252/624 (40.38%), Postives = 369/624 (59.13%), Query Frame = 0


Query: 24  KLHSQIIKAGLLKSGPLPNTLLDVYGKC----GLIPQALQLFDEMPHRDHVSWASILT-- 83
           + H+  +K+G      + N L+ VY KC     L+  A ++FDE+  +D  SW +++T  
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 84  -----------------------AHNQAI-------LPRRALSMLDIMFTVDGLQPDHFV 143
                                  A+N  I         + AL M+  M +  G++ D F 
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFT 289

Query: 144 FACIVRACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSIL 203
           +  ++RACA+ G L+LGKQVHA ++L          +SL+ +Y KC + D+ARA+F+ + 
Sbjct: 290 YPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 349

Query: 204 FKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNE 263
            K+ VSW A++SGY  SG   EA  +F+ +  +N+ SW  +ISGL ++G G   L LF+ 
Sbjct: 350 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 409

Query: 264 MRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCS 323
           M+REG +  D    S  + +CA L     G+Q H  ++  GF+S L   NAL+ MYAKC 
Sbjct: 410 MKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 469

Query: 324 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLY 383
            +  A+ +F  MP  D +SW ++I    QHG   EA+ +Y+EM+   I+P+ +T + +L 
Sbjct: 470 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 529

Query: 384 ACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDE 443
           ACSH GLV +GR+ F SM T Y+I P   HY  L+DLL RSG   +AE+++  +PFKP  
Sbjct: 530 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 589

Query: 444 PTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLM 503
             W +LLS C+ H N+++G+  AD +  L PE   TY+LLSN++A    WE V++VRKLM
Sbjct: 590 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 649

Query: 504 SSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVL 563
               V+KE   S I++  +   F   ++ HP  + ++  L+DL  EMRR GYVP+TSFVL
Sbjct: 650 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 709

Query: 564 HDMEQQ-EKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQR 611
           HD+E    KE  L  HSE++AVA+GL+K  PGT IRI KNLR CGDCHN  +F S + QR
Sbjct: 710 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 769

[Close]

BLAST of Clc10G10080 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 9.5e-131
Identity = 232/570 (40.70%), Postives = 350/570 (61.40%), Query Frame = 0


Query: 42  NTLLDVYGKCGLIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGL 101
           N LL  + K   I +A Q FD M  RD VSW +I+T + Q+     A  + D     +  
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-----ESP 282

Query: 102 QPDHFVFACIVRACASLGYLRLGKQVHARFMLSSFCD-DEVVKSSLIDMYAKCAQPDDAR 161
             D F +  +V      GY++      AR +     + +EV  ++++  Y +  + + A+
Sbjct: 283 VQDVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 342

Query: 162 AVFDSILFKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIY 221
            +FD +  +N  +W  MI+GYA+ G+  EA  LF ++P R+  SW A+I+G  QSG+   
Sbjct: 343 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 402

Query: 222 SLSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALV 281
           +L LF +M REG   ++    SS +  CA++  LELGKQ+HG ++  G+E+  F+ NAL+
Sbjct: 403 ALRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 462

Query: 282 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 341
            MY KC  I  A D+F  M  KD++SW ++I G ++HG  E AL  ++ M    +KP++ 
Sbjct: 463 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 522

Query: 342 TFVGLLYACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNE 401
           T V +L ACSH GLV +GR+ F +M+ DY + P+ QHY C++DLL R+G L++A NL+  
Sbjct: 523 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 582

Query: 402 MPFKPDEPTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESV 461
           MPF+PD   W +LL A + H N ++    AD +  ++PE+   Y+LLSN+YA +  W  V
Sbjct: 583 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 642

Query: 462 SKVRKLMSSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYV 521
            K+R  M    V+K PGYS I++  ++  F  G+  HP KDEIF  L++LD  M++ GYV
Sbjct: 643 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 702

Query: 522 PNTSFVLHDMEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFT 581
             TS VLHD+E++EKE+ + +HSERLAVAYG+++   G  IR++KNLR+C DCHN +K+ 
Sbjct: 703 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 762

Query: 582 SDIKQREIVVRDATRYHHFKEGKCSCNDFW 611
           + I  R I++RD  R+HHFK+G CSC D+W
Sbjct: 763 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of Clc10G10080 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 4.7e-130
Identity = 236/638 (36.99%), Postives = 367/638 (57.52%), Query Frame = 0


Query: 4   SHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKC------------ 63
           S + + +Q+C++ ++     K+H  I  +G +    + N LL +Y KC            
Sbjct: 86  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145

Query: 64  -------------------GLIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSML 123
                              GL+ +A +LFDEM  +D  SW +++T + +   P  AL + 
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 124 DIMFTVDGLQPDHFVFACIVRACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAK 183
            +M  V   +P+ F  +  V A A++  +R GK++H   + +    DEV+ SSL+DMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 184 CAQPDDARAVFDSILFKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGL 243
           C   D+AR +FD I+ K+ VSWT+MI  Y +S R  E   LF  +               
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL--------------- 325

Query: 244 IQSGNGIYSLSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESC 303
                 + S    NE              + V+ ACA+L   ELGKQ+HG +   GF+  
Sbjct: 326 ------VGSCERPNE-----------YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 385

Query: 304 LFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVL 363
            F S++LVDMY KC +I +AK +    P+ D++SWTS+I G AQ+G+ +EAL  +D ++ 
Sbjct: 386 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 445

Query: 364 SRIKPNEVTFVGLLYACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLD 423
           S  KP+ VTFV +L AC+H GLV +G E F S++  ++++ +  HYTCL+DLL+RSG  +
Sbjct: 446 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 505

Query: 424 EAENLLNEMPFKPDEPTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYA 483
           + +++++EMP KP +  WAS+L  C  + N+ +    A  +  ++PE+P TY+ ++N+YA
Sbjct: 506 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 565

Query: 484 GAEMWESVSKVRKLMSSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDA 543
            A  WE   K+RK M  + V K PG S  ++ ++  VF A ++ HPM ++I   L++L  
Sbjct: 566 AAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRK 625

Query: 544 EMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGD 603
           +M+  GYVP TS VLHD+E ++KE+ L +HSE+LAVA+ +L    GT I++ KNLR C D
Sbjct: 626 KMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVD 685

Query: 604 CHNVLKFTSDIKQREIVVRDATRYHHFKEGKCSCNDFW 611
           CH  +KF S+I +R+I VRD+TR+H F+ G+CSC D+W
Sbjct: 686 CHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691

[Close]

BLAST of Clc10G10080 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 4.4e-128
Identity = 236/621 (38.00%), Postives = 368/621 (59.26%), Query Frame = 0


Query: 24  KLHSQIIKAGLLKSGPLPNTLLDVYGKC-------------------------------G 83
           K+HS I+K GL  +  + N+LL++Y KC                               G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226

Query: 84  LIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIV 143
            +  A+  F++M  RD V+W S+++  NQ     RAL +   M     L PD F  A ++
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286

Query: 144 RACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKN-- 203
            ACA+L  L +GKQ+H+  + + F    +V ++LI MY++C   + AR + +    K+  
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346

Query: 204 SVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRR 263
              +TA++ GY + G   +A  +F  +  R++ +WTA+I G  Q G+   +++LF  M  
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406

Query: 264 EGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDIL 323
            G    +   L++++   ++LA L  GKQIHG  +  G    + +SNAL+ MYAK  +I 
Sbjct: 407 GG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 466

Query: 324 AAKDIFYRMP-RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYAC 383
           +A   F  +   +D +SWTS+I+  AQHG AEEAL L++ M++  ++P+ +T+VG+  AC
Sbjct: 467 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 526

Query: 384 SHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPT 443
           +H GLV++GR+ F  M    KI P+L HY C++DL  R+G L EA+  + +MP +PD  T
Sbjct: 527 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 586

Query: 444 WASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSS 503
           W SLLSAC+ H N+ +G   A+ +L L+PE+   Y  L+N+Y+    WE  +K+RK M  
Sbjct: 587 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 646

Query: 504 MEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHD 563
             V+KE G+S I++  +  VF   +  HP K+EI+  +K +  E+++ GYVP+T+ VLHD
Sbjct: 647 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 706

Query: 564 MEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIV 611
           +E++ KE+ L  HSE+LA+A+GL+     T +RI+KNLR+C DCH  +KF S +  REI+
Sbjct: 707 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 766

[Close]

BLAST of Clc10G10080 vs. ExPASy TrEMBL
Match: A0A6J1G9N5 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452061 PE=3 SV=1)

HSP 1 Score: 1161.7 bits (3004), Expect = 0.0e+00
Identity = 566/610 (92.79%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAGL K+GPL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLANTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRR LSML IMFT DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQRVPVRNLFSWTALISGLIQSGNGIYS SLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
            SSVVGACANLALLELGKQ+HGLVIA GFESCLFISN LVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DYKINPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKP+DPSTYILLSNVYAGAEMWESVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+ HPMKDEIF+LLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. ExPASy TrEMBL
Match: A0A6J1KBS5 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492878 PE=3 SV=1)

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 566/610 (92.79%), Postives = 589/610 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLCARRQS +AAGKLHSQIIKAGL K+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRR LSML IMFT DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK +AIELFQRVPVRNLFSWTALISGLIQSGNGIYS SLFNEMRREGID+VDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
            SSVVGACANLALLELGKQIHGLVIA GFESCLFISNALVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+ DYKINPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKPEDPSTYILLSNVYAGAEMW+SVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+ HPMK+EIF+LLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. ExPASy TrEMBL
Match: A0A1S3BZM7 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494781 PE=3 SV=1)

HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 565/611 (92.47%), Postives = 590/611 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNISHFLH+LQLCARRQSASAAGKLHSQIIKAG  KS  L NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGKLHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+A++PRR LSML+IMFT DGLQPDHFVFACIVRAC+SLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNKALIPRRTLSMLNIMFTNDGLQPDHFVFACIVRACSSLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLS FCDDEVVKSSLIDMY KC QPDDARAVFDSILFKNSVSWT+MISG
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YARSGRKCEA++LF +VPVRNLFSWTALISGLIQSG+GI+S SLFNEMRREGIDIVDPLV
Sbjct: 181 YARSGRKCEAMDLFLQVPVRNLFSWTALISGLIQSGHGIFSFSLFNEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
           LSSVVG CANLALLELGKQIHGLVIA GFESCLFISNALVDMYAKCSDILAAKDIFYRMP
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSH GLVSRGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+TDY INPSLQHYTCLLDLLSRSGHLDEAENLLNE+PFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLNEIPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNL+MGVRIAD +LDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLM+SMEVRK+PGYSS
Sbjct: 421 NNLEMGVRIADRLLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMNSMEVRKKPGYSS 480

Query: 481 IDLGKESQVFHAGESC-HPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQL 540
           ID GK+SQVFHAGESC HPMK+EIFNLLKDLDAEMR+RGYVPNTSFVL+D+EQQEKEKQL
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEIFNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 541 FWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHF 600
           FWHSERLAVAYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDI +REIVVRDATRYHHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIVVRDATRYHHF 600

Query: 601 KEGKCSCNDFW 611
           KEGKCSCNDFW
Sbjct: 601 KEGKCSCNDFW 611

[Close]

BLAST of Clc10G10080 vs. ExPASy TrEMBL
Match: A0A5D3E178 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00970 PE=3 SV=1)

HSP 1 Score: 1156.0 bits (2989), Expect = 0.0e+00
Identity = 565/611 (92.47%), Postives = 590/611 (96.56%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MNISHFLH+LQLCARRQSASAAGKLHSQIIKAG  KS  L NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGKLHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHN+A++PRR LSML+IMFT DGLQPDHFVFACIVRAC+SLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNKALIPRRTLSMLNIMFTNDGLQPDHFVFACIVRACSSLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLS FCDDEVVKSSLIDMY KC QPDDARAVFDSILFKNSVSWT+MISG
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YARSGRKCEA++LF +VPVRNLFSWTALISGLIQSG+GI+S SLFNEMRREGIDIVDPLV
Sbjct: 181 YARSGRKCEAMDLFLQVPVRNLFSWTALISGLIQSGHGIFSFSLFNEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
           LSSVVG CANLALLELGKQIHGLVIA GFESCLFISNALVDMYAKCSDILAAKDIFYRMP
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSH GLVSRGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM+TDY INPSLQHYTCLLDLLSRSGHLDEAENLLNE+PFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLNEIPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           NNL+MGVRIAD +LDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLM+SMEVRK+PGYSS
Sbjct: 421 NNLEMGVRIADRLLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMNSMEVRKKPGYSS 480

Query: 481 IDLGKESQVFHAGESC-HPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQL 540
           ID GK+SQVFHAGESC HPMK+EIFNLLKDLDAEMR+RGYVPNTSFVL+D+EQQEKEKQL
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEIFNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 541 FWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHF 600
           FWHSERLAVAYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDI +REIVVRDATRYHHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIVVRDATRYHHF 600

Query: 601 KEGKCSCNDFW 611
           KEGKCSCNDFW
Sbjct: 601 KEGKCSCNDFW 611

[Close]

BLAST of Clc10G10080 vs. ExPASy TrEMBL
Match: A0A6J1CPR6 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013178 PE=3 SV=1)

HSP 1 Score: 1146.3 bits (2964), Expect = 0.0e+00
Identity = 559/610 (91.64%), Postives = 583/610 (95.57%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           MN+SHFLHELQLCARRQSASAAGKLHSQIIK GL++ GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNVSHFLHELQLCARRQSASAAGKLHSQIIKTGLVQYGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDHVSWASILTAHNQAILPRR LSML+ M  +DGLQPDHF+FA IVRACASLG 
Sbjct: 61  FDEMPHRDHVSWASILTAHNQAILPRRTLSMLNTMLALDGLQPDHFIFASIVRACASLGI 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSF DDEVVKSSLIDMYAKC QPDDARAVFDSILFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFYDDEVVKSSLIDMYAKCRQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YARSGRK +AIELF RVPVRNLFSWTALISGLIQSGNG+YS SLF+EMRREGIDIVDPLV
Sbjct: 181 YARSGRKSDAIELFHRVPVRNLFSWTALISGLIQSGNGMYSFSLFSEMRREGIDIVDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
           LSSVVGACANLALLELGKQIH LVIA GFESCLFISNALVDMYAKCSDILAAKDIF  MP
Sbjct: 241 LSSVVGACANLALLELGKQIHCLVIALGFESCLFISNALVDMYAKCSDILAAKDIFLGMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
           RKDVISWTSIIVGTAQHG+AEEAL LYDEMVL+ +KPNEVTFVGLLYACSH GLV+RGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLLYACSHAGLVNRGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LFRSM  DY+INPSLQHYTCLLDLLSRSGHLDEAE+++NEMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMVADYRINPSLQHYTCLLDLLSRSGHLDEAESIINEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480
           N +KMGVRIADHVLDLKPEDPSTYILLSNVYA AEMWESVSKVRKLMSSMEVRKEPGYSS
Sbjct: 421 NXMKMGVRIADHVLDLKPEDPSTYILLSNVYASAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           ID GKESQVFHAGE+CHPM+DEIF+LLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETCHPMRDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFASDIVKREIVVRDATRYHHFK 600

Query: 601 EGKCSCNDFW 611
           EGKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]

BLAST of Clc10G10080 vs. TAIR 10
Match: AT4G14050.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 865.5 bits (2235), Expect = 2.5e-251
Identity = 407/612 (66.50%), Postives = 508/612 (83.01%), Query Frame = 0


Query: 1   MNISHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKCGLIPQALQL 60
           M I H+LH+LQLCAR ++ + A  LH+ I+K G+++  PL NTL++VYGKCG    ALQ+
Sbjct: 1   MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60

Query: 61  FDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIVRACASLGY 120
           FDEMPHRDH++WAS+LTA NQA L  + LS+   + +  GL+PD FVF+ +V+ACA+LG 
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180
           +  G+QVH  F++S + +DEVVKSSL+DMYAKC   + A+AVFDSI  KN++SWTAM+SG
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180

Query: 181 YARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRREGIDIVDPLV 240
           YA+SGRK EA+ELF+ +PV+NL+SWTALISG +QSG G+ + S+F EMRRE +DI+DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240

Query: 241 LSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
           LSS+VGACANLA    G+Q+HGLVIA GF+SC+FISNAL+DMYAKCSD++AAKDIF RM 
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHVGLVSRGRE 360
            +DV+SWTS+IVG AQHG+AE+AL LYD+MV   +KPNEVTFVGL+YACSHVG V +GRE
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360

Query: 361 LFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420
           LF+SM+ DY I PSLQHYTCLLDLL RSG LDEAENL++ MPF PDEPTWA+LLSACKR 
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420

Query: 421 NNLKMGVRIADH-VLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYS 480
              +MG+RIADH V   K +DPSTYILLSN+YA A +W  VS+ R+ +  MEVRK+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480

Query: 481 SIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMR-RRGYVPNTSFVLHDMEQQEKEKQ 540
           S+++ KE++VF+AGE+ HP+K++IF LLK L+ EMR R GYVP+TS++LHDM++QEKEK 
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540

Query: 541 LFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIVVRDATRYHH 600
           LFWHSER AVAYGLLKAVPGT IRIVKNLR+CGDCH VLK  S+I +REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600

Query: 601 FKEGKCSCNDFW 611
           FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612

[Close]

BLAST of Clc10G10080 vs. TAIR 10
Match: AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 486.1 bits (1250), Expect = 4.1e-137
Identity = 252/624 (40.38%), Postives = 369/624 (59.13%), Query Frame = 0


Query: 24  KLHSQIIKAGLLKSGPLPNTLLDVYGKC----GLIPQALQLFDEMPHRDHVSWASILT-- 83
           + H+  +K+G      + N L+ VY KC     L+  A ++FDE+  +D  SW +++T  
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 84  -----------------------AHNQAI-------LPRRALSMLDIMFTVDGLQPDHFV 143
                                  A+N  I         + AL M+  M +  G++ D F 
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFT 289

Query: 144 FACIVRACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSIL 203
           +  ++RACA+ G L+LGKQVHA ++L          +SL+ +Y KC + D+ARA+F+ + 
Sbjct: 290 YPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 349

Query: 204 FKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNE 263
            K+ VSW A++SGY  SG   EA  +F+ +  +N+ SW  +ISGL ++G G   L LF+ 
Sbjct: 350 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 409

Query: 264 MRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCS 323
           M+REG +  D    S  + +CA L     G+Q H  ++  GF+S L   NAL+ MYAKC 
Sbjct: 410 MKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 469

Query: 324 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLY 383
            +  A+ +F  MP  D +SW ++I    QHG   EA+ +Y+EM+   I+P+ +T + +L 
Sbjct: 470 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 529

Query: 384 ACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDE 443
           ACSH GLV +GR+ F SM T Y+I P   HY  L+DLL RSG   +AE+++  +PFKP  
Sbjct: 530 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 589

Query: 444 PTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLM 503
             W +LLS C+ H N+++G+  AD +  L PE   TY+LLSN++A    WE V++VRKLM
Sbjct: 590 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 649

Query: 504 SSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVL 563
               V+KE   S I++  +   F   ++ HP  + ++  L+DL  EMRR GYVP+TSFVL
Sbjct: 650 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 709

Query: 564 HDMEQQ-EKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQR 611
           HD+E    KE  L  HSE++AVA+GL+K  PGT IRI KNLR CGDCHN  +F S + QR
Sbjct: 710 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 769

[Close]

BLAST of Clc10G10080 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 468.8 bits (1205), Expect = 6.8e-132
Identity = 232/570 (40.70%), Postives = 350/570 (61.40%), Query Frame = 0


Query: 42  NTLLDVYGKCGLIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGL 101
           N LL  + K   I +A Q FD M  RD VSW +I+T + Q+     A  + D     +  
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-----ESP 282

Query: 102 QPDHFVFACIVRACASLGYLRLGKQVHARFMLSSFCD-DEVVKSSLIDMYAKCAQPDDAR 161
             D F +  +V      GY++      AR +     + +EV  ++++  Y +  + + A+
Sbjct: 283 VQDVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 342

Query: 162 AVFDSILFKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIY 221
            +FD +  +N  +W  MI+GYA+ G+  EA  LF ++P R+  SW A+I+G  QSG+   
Sbjct: 343 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 402

Query: 222 SLSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALV 281
           +L LF +M REG   ++    SS +  CA++  LELGKQ+HG ++  G+E+  F+ NAL+
Sbjct: 403 ALRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 462

Query: 282 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 341
            MY KC  I  A D+F  M  KD++SW ++I G ++HG  E AL  ++ M    +KP++ 
Sbjct: 463 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 522

Query: 342 TFVGLLYACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNE 401
           T V +L ACSH GLV +GR+ F +M+ DY + P+ QHY C++DLL R+G L++A NL+  
Sbjct: 523 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 582

Query: 402 MPFKPDEPTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESV 461
           MPF+PD   W +LL A + H N ++    AD +  ++PE+   Y+LLSN+YA +  W  V
Sbjct: 583 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 642

Query: 462 SKVRKLMSSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYV 521
            K+R  M    V+K PGYS I++  ++  F  G+  HP KDEIF  L++LD  M++ GYV
Sbjct: 643 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 702

Query: 522 PNTSFVLHDMEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFT 581
             TS VLHD+E++EKE+ + +HSERLAVAYG+++   G  IR++KNLR+C DCHN +K+ 
Sbjct: 703 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 762

Query: 582 SDIKQREIVVRDATRYHHFKEGKCSCNDFW 611
           + I  R I++RD  R+HHFK+G CSC D+W
Sbjct: 763 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of Clc10G10080 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 466.5 bits (1199), Expect = 3.4e-131
Identity = 236/638 (36.99%), Postives = 367/638 (57.52%), Query Frame = 0


Query: 4   SHFLHELQLCARRQSASAAGKLHSQIIKAGLLKSGPLPNTLLDVYGKC------------ 63
           S + + +Q+C++ ++     K+H  I  +G +    + N LL +Y KC            
Sbjct: 86  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145

Query: 64  -------------------GLIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSML 123
                              GL+ +A +LFDEM  +D  SW +++T + +   P  AL + 
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 124 DIMFTVDGLQPDHFVFACIVRACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAK 183
            +M  V   +P+ F  +  V A A++  +R GK++H   + +    DEV+ SSL+DMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 184 CAQPDDARAVFDSILFKNSVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGL 243
           C   D+AR +FD I+ K+ VSWT+MI  Y +S R  E   LF  +               
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL--------------- 325

Query: 244 IQSGNGIYSLSLFNEMRREGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESC 303
                 + S    NE              + V+ ACA+L   ELGKQ+HG +   GF+  
Sbjct: 326 ------VGSCERPNE-----------YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 385

Query: 304 LFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVL 363
            F S++LVDMY KC +I +AK +    P+ D++SWTS+I G AQ+G+ +EAL  +D ++ 
Sbjct: 386 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 445

Query: 364 SRIKPNEVTFVGLLYACSHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLD 423
           S  KP+ VTFV +L AC+H GLV +G E F S++  ++++ +  HYTCL+DLL+RSG  +
Sbjct: 446 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 505

Query: 424 EAENLLNEMPFKPDEPTWASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYA 483
           + +++++EMP KP +  WAS+L  C  + N+ +    A  +  ++PE+P TY+ ++N+YA
Sbjct: 506 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 565

Query: 484 GAEMWESVSKVRKLMSSMEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDA 543
            A  WE   K+RK M  + V K PG S  ++ ++  VF A ++ HPM ++I   L++L  
Sbjct: 566 AAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRK 625

Query: 544 EMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGD 603
           +M+  GYVP TS VLHD+E ++KE+ L +HSE+LAVA+ +L    GT I++ KNLR C D
Sbjct: 626 KMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVD 685

Query: 604 CHNVLKFTSDIKQREIVVRDATRYHHFKEGKCSCNDFW 611
           CH  +KF S+I +R+I VRD+TR+H F+ G+CSC D+W
Sbjct: 686 CHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691

[Close]

BLAST of Clc10G10080 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 459.9 bits (1182), Expect = 3.1e-129
Identity = 236/621 (38.00%), Postives = 368/621 (59.26%), Query Frame = 0


Query: 24  KLHSQIIKAGLLKSGPLPNTLLDVYGKC-------------------------------G 83
           K+HS I+K GL  +  + N+LL++Y KC                               G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226

Query: 84  LIPQALQLFDEMPHRDHVSWASILTAHNQAILPRRALSMLDIMFTVDGLQPDHFVFACIV 143
            +  A+  F++M  RD V+W S+++  NQ     RAL +   M     L PD F  A ++
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286

Query: 144 RACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKN-- 203
            ACA+L  L +GKQ+H+  + + F    +V ++LI MY++C   + AR + +    K+  
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346

Query: 204 SVSWTAMISGYARSGRKCEAIELFQRVPVRNLFSWTALISGLIQSGNGIYSLSLFNEMRR 263
              +TA++ GY + G   +A  +F  +  R++ +WTA+I G  Q G+   +++LF  M  
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406

Query: 264 EGIDIVDPLVLSSVVGACANLALLELGKQIHGLVIAFGFESCLFISNALVDMYAKCSDIL 323
            G    +   L++++   ++LA L  GKQIHG  +  G    + +SNAL+ MYAK  +I 
Sbjct: 407 GG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 466

Query: 324 AAKDIFYRMP-RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYAC 383
           +A   F  +   +D +SWTS+I+  AQHG AEEAL L++ M++  ++P+ +T+VG+  AC
Sbjct: 467 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 526

Query: 384 SHVGLVSRGRELFRSMSTDYKINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPT 443
           +H GLV++GR+ F  M    KI P+L HY C++DL  R+G L EA+  + +MP +PD  T
Sbjct: 527 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 586

Query: 444 WASLLSACKRHNNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSS 503
           W SLLSAC+ H N+ +G   A+ +L L+PE+   Y  L+N+Y+    WE  +K+RK M  
Sbjct: 587 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 646

Query: 504 MEVRKEPGYSSIDLGKESQVFHAGESCHPMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHD 563
             V+KE G+S I++  +  VF   +  HP K+EI+  +K +  E+++ GYVP+T+ VLHD
Sbjct: 647 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 706

Query: 564 MEQQEKEKQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIKQREIV 611
           +E++ KE+ L  HSE+LA+A+GL+     T +RI+KNLR+C DCH  +KF S +  REI+
Sbjct: 707 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 766

The following BLAST results are available for this feature:

BLAST of Clc10G10080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903469.1	0.0e+00	96.07	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Benincasa ...	[more]
XP_022948359.1	0.0e+00	92.79	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ...	[more]
XP_022998145.1	0.0e+00	92.79	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ...	[more]
XP_023523455.1	0.0e+00	92.46	pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ...	[more]
KAG6606966.1	0.0e+00	92.46	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Clc10G10080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23266	3.5e-250	66.50	Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop...	[more]
Q9FRI5	5.8e-136	40.38	Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	9.5e-131	40.70	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
O23169	4.7e-130	36.99	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]
Q9SHZ8	4.4e-128	38.00	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]

BLAST of Clc10G10080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9N5	0.0e+00	92.79	pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbit...	[more]
A0A6J1KBS5	0.0e+00	92.79	pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbit...	[more]
A0A1S3BZM7	0.0e+00	92.47	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14050, mito...	[more]
A0A5D3E178	0.0e+00	92.47	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1CPR6	0.0e+00	91.64	pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Momordic...	[more]

BLAST of Clc10G10080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14050.1	2.5e-251	66.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G25360.1	4.1e-137	40.38	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G02750.1	6.8e-132	40.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G37170.1	3.4e-131	36.99	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22070.1	3.1e-129	38.00	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 477..600 e-value: 1.3E-35 score: 122.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 42..67 e-value: 2.2E-4 score: 21.3 coord: 203..233 e-value: 4.4E-6 score: 26.6 coord: 378..401 e-value: 3.7E-4 score: 20.5 coord: 172..197 e-value: 3.0E-4 score: 20.8 coord: 144..166 e-value: 0.6 score: 10.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 203..233 e-value: 4.5E-4 score: 18.2 coord: 378..402 e-value: 0.001 score: 17.1 coord: 305..339 e-value: 8.3E-6 score: 23.7 coord: 42..70 e-value: 7.0E-4 score: 17.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 302..349 e-value: 1.1E-9 score: 38.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 170..204 score: 10.128299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 374..408 score: 9.404853
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..337 score: 11.103854
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..130 e-value: 1.2E-15 score: 59.8 coord: 322..493 e-value: 1.9E-33 score: 118.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 138..255 e-value: 5.0E-21 score: 76.8
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 5..598
None	No IPR available	PANTHER	PTHR47928:SF153	OS11G0661000 PROTEIN	coord: 5..598

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G10080.1	Clc10G10080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding