Clc10G09350 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G09350
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	agamous-like MADS-box protein AGL62
Location	ClcChr10: 21324172 .. 21325355 (-)
RNA-Seq Expression	Clc10G09350
Synteny	Clc10G09350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGAGCAGAGGCAGGCAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAGGTCACCTTCTCGAAGCGTCGGTCCGGTCTCTTCAAGAAAGCTAGCGAGCTCTGCACGCTGTGTGGTGCTGAGATTGCCATCATCGTCTTCTCTCCCGGGAAGAAGGTTTTCTCCTTTGGCCACCCTTGCGTTGAGGCTCTCATCGAACGCTTTGTGACACGAAACCCTCCACCGAGCTCCGGTACGCTGCAGCTAATCGAAGCCCACAGGAATGCCAATGTTCGAGAACTGAATGCACAACTTACTCAAGTGCTGAACCAGCTTGAAATGGAGCGGAAGCGCAGTGAAGAGTTGAACAAACTGCGGAAGGCAAGCCAGGTATTGATAACTATTTTCTATTTTTCTTTTTTAATTTTTAAACTAAAACATTTTCACAATTCAAAACTTTTTTTTAAACATAACCGTTTGATGTTTAGAAATTGTTTCCGTTTAGAATTGAGAGTACTACGTGCATTTCTTTGTGCATTTTGCCAAATTTTTCAACCATAATTTGTCACGTGACAAATTCATTTTAATTTTTTTAAAAATCTTTTAGTTCTTTTTTTATGTGTTATGAATAAAGATGGTACATGCATTTTAGGATGCATCTAATAATTTGACAAAAAATTCGGAGTTTTATTCTTTCTTCCTATTGTTGAAGTAAGGTGAAAATGATCCAAGGAAAAAAAAATTTAGTTACGAGTAAACGAGAATAATTTTTTAAACTCGAAATCGTTATCAAACAAAGATCCAAACTCCAAAATCTATGCAATGTTCAAATATTCCTATTAAATTACTATTGAATGTTTAAAGTATAGGTGAATAAATAATAACATATTTAATATTTTATATATATTAAGGCACAATGTTGGTGGGAGCTTCCCATAGAAGAAATGGAAATGCATCAACTAGAACAACTTAAAGCATCGTTGGATGAGCTAAAGAAGAATGTCACACAACAAGCTGATCGGATTTTAATTCAGACTTCTAATGCCAATCCGCCGCCGCAGTTCTTCCCGACTCCACCAACACCGGCGAACCCTAGCCAGCAAGCTGGCCTTTTCGTCGTCGATCCGAAGAACATCATCTCCCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

mRNA sequence

ATGAGGAAGAGCAGAGGCAGGCAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAGGTCACCTTCTCGAAGCGTCGGTCCGGTCTCTTCAAGAAAGCTAGCGAGCTCTGCACGCTGTGTGGTGCTGAGATTGCCATCATCGTCTTCTCTCCCGGGAAGAAGGTTTTCTCCTTTGGCCACCCTTGCGTTGAGGCTCTCATCGAACGCTTTGTGACACGAAACCCTCCACCGAGCTCCGGTACGCTGCAGCTAATCGAAGCCCACAGGAATGCCAATGTTCGAGAACTGAATGCACAACTTACTCAAGTGCTGAACCAGCTTGAAATGGAGCGGAAGCGCAGTGAAGAGTTGAACAAACTGCGGAAGGCAAGCCAGGCACAATGTTGGTGGGAGCTTCCCATAGAAGAAATGGAAATGCATCAACTAGAACAACTTAAAGCATCGTTGGATGAGCTAAAGAAGAATGTCACACAACAAGCTGATCGGATTTTAATTCAGACTTCTAATGCCAATCCGCCGCCGCAGTTCTTCCCGACTCCACCAACACCGGCGAACCCTAGCCAGCAAGCTGGCCTTTTCGTCGTCGATCCGAAGAACATCATCTCCCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

Coding sequence (CDS)

ATGAGGAAGAGCAGAGGCAGGCAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAGGTCACCTTCTCGAAGCGTCGGTCCGGTCTCTTCAAGAAAGCTAGCGAGCTCTGCACGCTGTGTGGTGCTGAGATTGCCATCATCGTCTTCTCTCCCGGGAAGAAGGTTTTCTCCTTTGGCCACCCTTGCGTTGAGGCTCTCATCGAACGCTTTGTGACACGAAACCCTCCACCGAGCTCCGGTACGCTGCAGCTAATCGAAGCCCACAGGAATGCCAATGTTCGAGAACTGAATGCACAACTTACTCAAGTGCTGAACCAGCTTGAAATGGAGCGGAAGCGCAGTGAAGAGTTGAACAAACTGCGGAAGGCAAGCCAGGCACAATGTTGGTGGGAGCTTCCCATAGAAGAAATGGAAATGCATCAACTAGAACAACTTAAAGCATCGTTGGATGAGCTAAAGAAGAATGTCACACAACAAGCTGATCGGATTTTAATTCAGACTTCTAATGCCAATCCGCCGCCGCAGTTCTTCCCGACTCCACCAACACCGGCGAACCCTAGCCAGCAAGCTGGCCTTTTCGTCGTCGATCCGAAGAACATCATCTCCCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

Protein sequence

MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEELNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFFPTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF

Homology

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BLAST of Clc10G09350 vs. NCBI nr
Match: XP_022942821.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 7.2e-110
Identity = 206/220 (93.64%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQTSN NPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
           PT PTPANP+QQ G++VVD KN+ISHLPYNYGSYGSRGFF
Sbjct: 181 PT-PTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

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BLAST of Clc10G09350 vs. NCBI nr
Match: KAG7030923.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.4 bits (1038), Expect = 6.1e-109
Identity = 205/220 (93.18%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQTSN NPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
            T PTPANP+QQ G++VVD KN+ISHLPYNYGSYGSRGFF
Sbjct: 181 ST-PTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

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BLAST of Clc10G09350 vs. NCBI nr
Match: XP_022149295.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 204/220 (92.73%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLNQLEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKASQAQ WWELPIEEMEM+QLEQLK SL+ELKKNVTQ ADRIL+QTSN NPPPQ+F
Sbjct: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
           PT P+PANP+QQ G+FVVDPKN+ISHLPYNYGSYGSRGFF
Sbjct: 181 PT-PSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 219

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BLAST of Clc10G09350 vs. NCBI nr
Match: XP_022975753.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 402.9 bits (1034), Expect = 1.8e-108
Identity = 204/220 (92.73%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKA+Q QCWWELPIEEME++QLEQLK SLDELKKNV QQADRILIQTSN NPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELYQLEQLKLSLDELKKNVMQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
           PT PTPANP+QQ G++VVD KN+ISHLPYNYGSYGSRGFF
Sbjct: 181 PT-PTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

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BLAST of Clc10G09350 vs. NCBI nr
Match: XP_008454428.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0044310.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 209/226 (92.48%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQT-SNANPPPQF 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQT SNANPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 -----FPTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
                 PTP T   P+QQ GLFVVDPKNIISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

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BLAST of Clc10G09350 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.9e-50
Identity = 104/168 (61.90%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN  LTQVL+QLE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLRKASQA-QCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADR 166
           EL K+R+ ++A   WWE P+EE+ + QLE  K +L+ LKK VT +A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

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BLAST of Clc10G09350 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 93/197 (47.21%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+++E E+K+ + + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKASQAQC---WWELPIEEMEMHQLEQLKASLDELKKNV-------TQQADRILIQTS 181
           ++RK S  +    WWE P+EEM M QL+++K +L+EL+K V        +  D +     
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLD 238

Query: 182 NANPPPQFFPTPPTPAN 189
           N    P +   P  P+N
Sbjct: 239 NKVTVPPYVNMPSGPSN 253

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BLAST of Clc10G09350 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-29
Identity = 74/166 (44.58%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL- 121
           GHP V  L++  + R            E+     ++ LN  LT+V+ + E E++  + + 
Sbjct: 63  GHPNVNKLLDHSLGR--VIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIV 122

Query: 122 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRI 167
              R+   A+ WW     E+ + Q   +K  L+ LKK V ++  ++
Sbjct: 123 QNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

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BLAST of Clc10G09350 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28
Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERK-RSEE 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V  ++E E+K +   
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSR 121

Query: 121 LNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTS 172
               R+   A+ WW     E+ + Q   +   L +LKK V ++A +++ QT+
Sbjct: 122 AQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTN 171

[Close]

BLAST of Clc10G09350 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 58/162 (35.80%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 6   GRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPC 65
           GR+K++M  + + +  QVTFSKRR+GLFKKASEL TLC AE+ I+VFSPG K FS+G P 
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEE-LNKLR 125
           ++++ ERF+       SG  +    +R   ++ L+ +L  +  ++E E++R E+   KL 
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYR-PKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 121

Query: 126 KASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRI 167
            A   +  ++  IE + + +L + K  L  +   +  Q + +
Sbjct: 122 SAGDER--FKESIETLTLDELNEYKDRLQTVHGRIEGQVNHL 160

[Close]

BLAST of Clc10G09350 vs. ExPASy TrEMBL
Match: A0A6J1FPY5 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111447736 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.5e-110
Identity = 206/220 (93.64%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQTSN NPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
           PT PTPANP+QQ G++VVD KN+ISHLPYNYGSYGSRGFF
Sbjct: 181 PT-PTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

[Close]

BLAST of Clc10G09350 vs. ExPASy TrEMBL
Match: A0A6J1D5B6 (agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC111017745 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.0e-109
Identity = 204/220 (92.73%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLNQLEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKASQAQ WWELPIEEMEM+QLEQLK SL+ELKKNVTQ ADRIL+QTSN NPPPQ+F
Sbjct: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
           PT P+PANP+QQ G+FVVDPKN+ISHLPYNYGSYGSRGFF
Sbjct: 181 PT-PSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 219

[Close]

BLAST of Clc10G09350 vs. ExPASy TrEMBL
Match: A0A6J1IK72 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111476097 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.6e-109
Identity = 204/220 (92.73%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNANPPPQFF 180
           NKLRKA+Q QCWWELPIEEME++QLEQLK SLDELKKNV QQADRILIQTSN NPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELYQLEQLKLSLDELKKNVMQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
           PT PTPANP+QQ G++VVD KN+ISHLPYNYGSYGSRGFF
Sbjct: 181 PT-PTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

[Close]

BLAST of Clc10G09350 vs. ExPASy TrEMBL
Match: A0A5A7TM75 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00310 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.5e-108
Identity = 209/226 (92.48%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQT-SNANPPPQF 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQT SNANPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 -----FPTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
                 PTP T   P+QQ GLFVVDPKNIISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

[Close]

BLAST of Clc10G09350 vs. ExPASy TrEMBL
Match: A0A1S3BYP6 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.5e-108
Identity = 209/226 (92.48%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKR EEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQT-SNANPPPQF 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQT SNANPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 -----FPTPPTPANPSQQAGLFVVDPKNIISHLPYNYGSYGSRGFF 221
                 PTP T   P+QQ GLFVVDPKNIISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

[Close]

BLAST of Clc10G09350 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-51
Identity = 104/168 (61.90%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN  LTQVL+QLE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLRKASQA-QCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADR 166
           EL K+R+ ++A   WWE P+EE+ + QLE  K +L+ LKK VT +A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

[Close]

BLAST of Clc10G09350 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 157.9 bits (398), Expect = 9.2e-39
Identity = 93/197 (47.21%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+++E E+K+ + + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKASQAQC---WWELPIEEMEMHQLEQLKASLDELKKNV-------TQQADRILIQTS 181
           ++RK S  +    WWE P+EEM M QL+++K +L+EL+K V        +  D +     
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLD 238

Query: 182 NANPPPQFFPTPPTPAN 189
           N    P +   P  P+N
Sbjct: 239 NKVTVPPYVNMPSGPSN 253

[Close]

BLAST of Clc10G09350 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.8e-35
Identity = 86/186 (46.24%), Postives = 123/186 (66.13%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           +R ++GRQK+EM KM NESNLQVTFSKRR GLFKKASELCTL GAEI +IVFSPG KVFS
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPS-----SGTLQLIEAHRNANVRELNAQLTQVLNQLEMERK 120
           FGHP V+ LI RF   N   +     +  LQL+E   + N++ LN  LT+VL   E E++
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQ 121

Query: 121 RSEELNKLRKA-SQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSNAN 180
           +   L+ L+++  Q   W+E  +++++M++  QL ++L ++KK + ++    + Q S  N
Sbjct: 122 KRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVRE----MSQYSQVN 181

[Close]

BLAST of Clc10G09350 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-30
Identity = 74/166 (44.58%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRSEEL- 121
           GHP V  L++  + R            E+     ++ LN  LT+V+ + E E++  + + 
Sbjct: 63  GHPNVNKLLDHSLGR--VIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIV 122

Query: 122 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRI 167
              R+   A+ WW     E+ + Q   +K  L+ LKK V ++  ++
Sbjct: 123 QNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Clc10G09350 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERK-RSEE 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V  ++E E+K +   
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSR 121

Query: 121 LNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTS 172
               R+   A+ WW     E+ + Q   +   L +LKK V ++A +++ QT+
Sbjct: 122 AQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTN 171

The following BLAST results are available for this feature:

BLAST of Clc10G09350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942821.1	7.2e-110	93.64	agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous...	[more]
KAG7030923.1	6.1e-109	93.18	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022149295.1	1.0e-108	92.73	agamous-like MADS-box protein AGL62 [Momordica charantia]	[more]
XP_022975753.1	1.8e-108	92.73	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]
XP_008454428.1	2.0e-107	92.48	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0044310.1 agam...	[more]

BLAST of Clc10G09350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	3.9e-50	61.90	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.3e-37	47.21	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	3.8e-29	44.58	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	2.5e-28	44.19	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
O64703	1.1e-17	35.80	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Clc10G09350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPY5	3.5e-110	93.64	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11144773...	[more]
A0A6J1D5B6	5.0e-109	92.73	agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC1110177...	[more]
A0A6J1IK72	8.6e-109	92.73	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111476097 ...	[more]
A0A5A7TM75	9.5e-108	92.48	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BYP6	9.5e-108	92.48	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4...	[more]

BLAST of Clc10G09350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	2.8e-51	61.90	AGAMOUS-like 62	[more]
AT2G24840.1	9.2e-39	47.21	AGAMOUS-like 61	[more]
AT4G36590.1	2.8e-35	46.24	MADS-box transcription factor family protein	[more]
AT1G01530.1	2.7e-30	44.58	AGAMOUS-like 28	[more]
AT1G65360.1	1.7e-29	44.19	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..130
None	No IPR available	COILS	Coil	Coil	coord: 138..165
None	No IPR available	GENE3D	6.10.140.920		coord: 83..175 e-value: 1.3E-19 score: 72.5
None	No IPR available	PANTHER	PTHR11945:SF677	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 5..183
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..183
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 27..42 score: 67.1 coord: 7..27 score: 46.13 coord: 42..63 score: 41.44
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 1.7E-30 score: 117.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 16..61 e-value: 3.5E-24 score: 84.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 23.548571
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 17..81 e-value: 3.1E-27 score: 96.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..78
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 6..73 e-value: 7.13584E-34 score: 114.572

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G09350.1	Clc10G09350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding