Clc10G07890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G07890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr10: 16930835 .. 16931749 (-)
RNA-Seq Expression	Clc10G07890
Synteny	Clc10G07890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAAGAATGAAAAATCGAATTTTCGAGCTCAACAGAAGTTTATTCATTAAGTCATATTATGATCTGATAAAAGTAAGGCGTGGAGGTATAATATAAAGAAGACCAATAATGAAAGGAATTGGAATGAGTGCCTTAACAAAAATAAACCCGCAAGTTTGTGTGAAGAAGCAAGCAAAGAATTGTTTCCCAATAAATAGTTTAGTCAATTCAATCTCTCTCTCTATTCTTCTTTCCCTTTGCCTCACCCCATCTAATTATCCATCCCCTCTTCAAAATTCGAATTCCGATCCCACCCCATCGCCGACATCATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGAACAGCTGACATTATTACCTTTTTGCCCTTTTTCAACCGCATTTATTAGCCAATTTTACTCTTTTCTTGAATTAAATATGAGAATAGAGATATTGAAAAATATGAGAATAGAGATATTGAGTTAAATTCGAGTCA

mRNA sequence

TTGAAAGAATGAAAAATCGAATTTTCGAGCTCAACAGAAGTTTATTCATTAAGTCATATTATGATCTGATAAAAGTAAGGCGTGGAGGTATAATATAAAGAAGACCAATAATGAAAGGAATTGGAATGAGTGCCTTAACAAAAATAAACCCGCAAGTTTGTGTGAAGAAGCAAGCAAAGAATTGTTTCCCAATAAATAGTTTAGTCAATTCAATCTCTCTCTCTATTCTTCTTTCCCTTTGCCTCACCCCATCTAATTATCCATCCCCTCTTCAAAATTCGAATTCCGATCCCACCCCATCGCCGACATCATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGAACAGCTGACATTATTACCTTTTTGCCCTTTTTCAACCGCATTTATTAGCCAATTTTACTCTTTTCTTGAATTAAATATGAGAATAGAGATATTGAAAAATATGAGAATAGAGATATTGAGTTAAATTCGAGTCA

Coding sequence (CDS)

ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

Protein sequence

MKAATSYNTKALDSTIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS

Homology

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BLAST of Clc10G07890 vs. NCBI nr
Match: XP_031739981.1 (uncharacterized protein LOC105435202 [Cucumis sativus] >KAE8649284.1 hypothetical protein Csa_015357 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK+EEEEEEEEEEE  
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEES- 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
              DKNGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 ---DKNGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 154

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BLAST of Clc10G07890 vs. NCBI nr
Match: XP_038904267.1 (uncharacterized protein LOC120090620 [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 9.7e-61
Identity = 133/159 (83.65%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MKAATSYNTKALDST---IHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRA 60
           MKAA SYN KALDST   +HRAGV+L+RNCDLPPPQKV +SGMEEKLELLKALRLSQTRA
Sbjct: 1   MKAAMSYNPKALDSTAEMVHRAGVDLLRNCDLPPPQKVLRSGMEEKLELLKALRLSQTRA 60

Query: 61  REAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEE 120
           REAERKAAKLMEE+DC+SRAFEDEARL+FCYRQSVKLL+LRVSKLQK      EEEEEEE
Sbjct: 61  REAERKAAKLMEEKDCISRAFEDEARLMFCYRQSVKLLDLRVSKLQK------EEEEEEE 120

Query: 121 EEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EEERD NGGS GMKWVWALAICLSVVGVG L  YTCN S
Sbjct: 121 EEERDNNGGSEGMKWVWALAICLSVVGVGVLLSYTCNAS 153

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BLAST of Clc10G07890 vs. NCBI nr
Match: XP_008455680.1 (PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo] >TYJ96905.1 uncharacterized protein E5676_scaffold220G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 134/158 (84.81%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLELRV KLQK  +E EE EEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCKLQK--QEVEEVEEEEEE 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EERD+NGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 EERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 156

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BLAST of Clc10G07890 vs. NCBI nr
Match: KAA0045323.1 (uncharacterized protein E6C27_scaffold316G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 133/158 (84.18%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLE+RV KLQK  +E EE EEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLEIRVCKLQK--QEVEEVEEEEEE 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EERD+NGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 EERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 156

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BLAST of Clc10G07890 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-45
Identity = 111/173 (64.16%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 8   NTKALDST------IHRAGVELIRNCDLPPPQKVFKS-------------------GMEE 67
           N +ALDST       ++ GV+LIRNCDLPPPQK+F +                   GMEE
Sbjct: 61  NPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVEAGGMEE 120

Query: 68  KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKL 127
           KLELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLIFCYRQS+KL+ELRVSKL
Sbjct: 121 KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSKL 180

Query: 128 QKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCND 156
           +K +EEEE+          + NG  GG+KWVWALAICLSVVGVG L GY C++
Sbjct: 181 KKRKEEEED----------NGNGNGGGVKWVWALAICLSVVGVGILLGYACSN 223

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BLAST of Clc10G07890 vs. ExPASy TrEMBL
Match: A0A5D3BEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00050 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61
Identity = 134/158 (84.81%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLELRV KLQK  +E EE EEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCKLQK--QEVEEVEEEEEE 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EERD+NGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 EERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 156

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BLAST of Clc10G07890 vs. ExPASy TrEMBL
Match: A0A1S3C2P7 (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61
Identity = 134/158 (84.81%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLELRV KLQK  +E EE EEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCKLQK--QEVEEVEEEEEE 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EERD+NGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 EERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 156

[Close]

BLAST of Clc10G07890 vs. ExPASy TrEMBL
Match: A0A5A7TP56 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00950 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 133/158 (84.18%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLE+RV KLQK  +E EE EEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLEIRVCKLQK--QEVEEVEEEEEE 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EERD+NGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 EERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 156

[Close]

BLAST of Clc10G07890 vs. ExPASy TrEMBL
Match: A0A0A0KZ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.9e-60
Identity = 139/196 (70.92%), Postives = 147/196 (75.00%), Query Frame = 0


Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQK-------------- 120
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK              
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEEEE 120

Query: 121 ------------------------EEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICL 157
                                   EEEEEEEEEEEEEEEE DKNGG+GGMKWVWALAICL
Sbjct: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESDKNGGNGGMKWVWALAICL 180

[Close]

BLAST of Clc10G07890 vs. ExPASy TrEMBL
Match: A0A6J1HY55 (uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 111/173 (64.16%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 8   NTKALDST------IHRAGVELIRNCDLPPPQKVFKS-------------------GMEE 67
           N +ALDST       ++ GV+LIRNCDLPPPQK+F +                   GMEE
Sbjct: 61  NPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVEAGGMEE 120

Query: 68  KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKL 127
           KLELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLIFCYRQS+KL+ELRVSKL
Sbjct: 121 KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSKL 180

Query: 128 QKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCND 156
           +K +EEEE+          + NG  GG+KWVWALAICLSVVGVG L GY C++
Sbjct: 181 KKRKEEEED----------NGNGNGGGVKWVWALAICLSVVGVGILLGYACSN 223

[Close]

BLAST of Clc10G07890 vs. TAIR 10
Match: AT1G01240.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 24  IRNCDLPPPQKVFKS----------------------------------GMEE------- 83
           I+NCDLPPPQK+ KS                                  G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 84  ---------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVK 143
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 144 LLELRVSKLQKEEEEEEEEE-------EEEEEEERDKNGGSGGMKWVWALAICLSVVGVG 153
           LLE+    LQ ++EEE+EE+       + ++  E+ K G +G  +++ A A+  S++G G
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG--RYMMAFALGFSLIGAG 320

[Close]

BLAST of Clc10G07890 vs. TAIR 10
Match: AT1G01240.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 24  IRNCDLPPPQKVFKS----------------------------------GMEE------- 83
           I+NCDLPPPQK+ KS                                  G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 84  ---------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVK 143
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 144 LLELRVSKLQKEEEEEEEEE-------EEEEEEERDKNGGSGGMKWVWALAICLSVVGVG 153
           LLE+    LQ ++EEE+EE+       + ++  E+ K G +G  +++ A A+  S++G G
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG--RYMMAFALGFSLIGAG 320

[Close]

BLAST of Clc10G07890 vs. TAIR 10
Match: AT1G01240.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 24  IRNCDLPPPQKVFKS----------------------------------GMEE------- 83
           I+NCDLPPPQK+ KS                                  G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 84  ---------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVK 143
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 144 LLELRVSKLQKEEEEEEEEE-------EEEEEEERDKNGGSGGMKWVWALAICLSVVGVG 153
           LLE+    LQ ++EEE+EE+       + ++  E+ K G +G  +++ A A+  S++G G
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG--RYMMAFALGFSLIGAG 320

[Close]

BLAST of Clc10G07890 vs. TAIR 10
Match: AT2G46550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-07
Identity = 60/211 (28.44%), Postives = 92/211 (43.60%), Query Frame = 0


Query: 2   KAATSYNTKALD---STIHRAGVELIRNCDLPPPQKVFKS-----------GMEE----- 61
           KAA  + T   D   S + +  ++ + NCDLP PQK+ +S           G+ +     
Sbjct: 178 KAAPWWRTTDKDELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSG 237

Query: 62  -------------------------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRA 121
                                    K ELL+ALR SQTRAREAE  A +   E++ L + 
Sbjct: 238 QTIKGTSKGSSCKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKI 297

Query: 122 FEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEE----------------EEEEER 153
              +A  +F Y+Q ++LL+L    LQ + +E + +  +                E  + R
Sbjct: 298 LLKQAAELFGYKQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRR 357

[Close]

BLAST of Clc10G07890 vs. TAIR 10
Match: AT2G46550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). )

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-07
Identity = 60/211 (28.44%), Postives = 92/211 (43.60%), Query Frame = 0


Query: 2   KAATSYNTKALD---STIHRAGVELIRNCDLPPPQKVFKS-----------GMEE----- 61
           KAA  + T   D   S + +  ++ + NCDLP PQK+ +S           G+ +     
Sbjct: 38  KAAPWWRTTDKDELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSG 97

Query: 62  -------------------------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRA 121
                                    K ELL+ALR SQTRAREAE  A +   E++ L + 
Sbjct: 98  QTIKGTSKGSSCKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKI 157

Query: 122 FEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEE----------------EEEEER 153
              +A  +F Y+Q ++LL+L    LQ + +E + +  +                E  + R
Sbjct: 158 LLKQAAELFGYKQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRR 217

The following BLAST results are available for this feature:

BLAST of Clc10G07890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739981.1	1.5e-61	84.81	uncharacterized protein LOC105435202 [Cucumis sativus] >KAE8649284.1 hypothetica...	[more]
XP_038904267.1	9.7e-61	83.65	uncharacterized protein LOC120090620 [Benincasa hispida]	[more]
XP_008455680.1	1.3e-60	84.81	PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo] >TYJ96905.1 uncha...	[more]
KAA0045323.1	2.2e-60	84.18	uncharacterized protein E6C27_scaffold316G00950 [Cucumis melo var. makuwa]	[more]
XP_022970087.1	3.4e-45	64.16	uncharacterized protein LOC111469054 [Cucurbita maxima]	[more]

BLAST of Clc10G07890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G07890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BEN7	6.2e-61	84.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C2P7	6.2e-61	84.81	uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=...	[more]
A0A5A7TP56	1.1e-60	84.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KZ57	8.9e-60	70.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097690 PE=4 SV=1	[more]
A0A6J1HY55	1.6e-45	64.16	uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054...	[more]

BLAST of Clc10G07890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01240.1	1.2e-08	31.72	unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 1...	[more]
AT1G01240.2	1.2e-08	31.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01240.3	1.2e-08	31.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46550.1	3.9e-07	28.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46550.2	3.9e-07	28.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..124
None	No IPR available	COILS	Coil	Coil	coord: 50..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..121
None	No IPR available	PANTHER	PTHR33868:SF10	OS08G0483100 PROTEIN	coord: 13..40 coord: 40..153
None	No IPR available	PANTHER	PTHR33868	EXPRESSED PROTEIN	coord: 40..153 coord: 13..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G07890.1	Clc10G07890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane