Clc10G06740 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G06740
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	KH domain-containing protein
Location	ClcChr10: 9310277 .. 9316098 (+)
RNA-Seq Expression	Clc10G06740
Synteny	Clc10G06740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCATTCCCATTCCCATTCCCATTCCCATTCCTCATCTCATTCTCTTCTCCCATTTCATTGCCACTGACTCATTGATTGCCAAGAACGAACATCACACAGTAAAATTCACAAAAACAAGAAAAAACCCACTCGCCTCGCCACGATCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCCTCCTCTTCTTTCCTATAGGGCTTTCCTTTTTCCGCCACCGCCAATACTCCCAATCCCCTTTCAATCGACTACCCTTTATCTCTTTCCCCCAGATTCATCGTCTTCTTCCCTCTTTCTGCAAAGGTACGCCTCTTTCTCCATCTGGGTCGCTCTGTTTTTCCTTCAATATGTTCTTTCCACTCTTCTTTTTCACTTATTAACCCAATTCTACTTCTGGGTTTCTTCTCTTCTCTAGTTTATGCGTGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGGTAATTCTTCTTTGTCTTTCTTCTGAATTCTTGATCATGATTTGCTTTTCTTTTCTTTTTTTAATTCTTATCTGGTACTTCTTGATTCAGATTCCTTGTTTGATTGATCATCTTTTTAATTTTCTTGTGTTGGTTTGATGGTCTTTATCATTGCATTCGAATGCTAACTAGAAGGTCTTATATCCGGTTGTGCTATTGAACATGTAGTCAGCTTTTGGACCTTATGAGTTATATGTGATGGTGATTTTTGTGTTGTGTGACAATGGCAGATATCTAGCTGAATTACTCTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGGTGGGCTTATAAGATCTCTACTATTGCATTTTGTTGTTACGATACTTATTATTTCTTATGCTGGTATTAGTGGAACCATAGTTTTCATCTTAAACTACAGTTAGGGTCTTTCATCCTTTGAAGTCTACTATCGGTTGGCACTGTTCTCTTAATCATTGAACAAATTTAATTACAACCAAGGGTCCAAGTATACAAGTTTCAATATAGTTTTATATACAACTTTTTAAAAATAATAATAATAATGCTTGGAGTTGTAGCTATCTTGGTATGTTTTTTGTATTAAATGCTACTAACTATCAATTGTATCAAGTGGTATCAAAGCATCATTCAAGGTATTAATTTATTGGAAGAAAGGCTTGAAGCACAAGTGGGTTTGGTAGAGAAGAAAATTTAAGATGTTGAAAGAAGTTGGTGATGGAAATTTGTTGACTCAAGAAAAGCTCAAGAACTGCAAAGAAGATGCAAATCATGCTCAATCAGGTGGAACAAACGTTGAATGAGAATTTGTTACTTGCTATTGGAGAAGCAAACCACCAATGAGCAATTGGGATAGAAGTTTTTACTCCCTCAACTCTTAGAAAAGAATTTGCTTCCTGCCAAAGGATGAACAATTACATGAATTATATAACAAAAATACATGAGATCAGAGGATCAGAAATGGACCTTCGTGGAGGGGCCAAGAATAACATTGGTATGTTGTGTGGCTAGATATTGCAAGGGGAACATTGTCTGAGGAGAAGTCAGTACTCCCTCGTTGTGAAAGAAAACCCACTGGAGTGAGATTTCAAGGTTGTGGGTGATATCTTTATAAACAGGGTGGTGACATCGTAAATGTGGAGTTCACTCACATTAGCAAAAATGAAAACATACTAATTCAAATTCAATGGGAGTTTGTAATTGTTGTGAGCAATGTTATCCCCCTTTCTCAGATCCTTCATTTGGAAGATCTGCCTTTGTACTTTGTTTTTTCATCTTCCTCCCATACATATATATGTATGAAATAAAGACACTTTTCTGTGGTGGGATTGCAGATGGATAGATGCTTGTTGGAGAAATCGAGGGCAGTGAAGTAAGTTAGGTAGCAACAGAGAAAAATGAAGGTAGGTGTAGGAAGATTGCATATTTGAGCCATGTAAAAGAAGTGTTGAGGTGGATTAACAGAAGGCAGTGCTCGTTTAGGTGTGCTTGGATGGAGTACAAACCGTGGTGGAATTTAGTTACCAGGGATTTGGAAGGAGATAATTTCAGTCTAGAACCATTCCTTGATCCACACCTTGAGGACAAGGTGTATTTTTGGTGGAGTATGATAGGACCTGTATCAAGGGGTAGAGCCTTGCCATTTGTAAGGTAGTTTAAAAGGAGTCGCTTTGTGTTTTGGGACCACTATTTGTAAATAGGGGCTGGCTGGTTGGAGAGACAAAACTTGGTGGTTCTTTGGCTTGTGCTTGCTAAAAAATGAAGCATCCTTGCTACTTTGATAACTTGAGATTATACCTATCTTGCAGTATCTGCCTATTACATGCAATTAAGAGATCTCCTTGTTTTCTGGTGCCTATTAAATACCCATGCCTTATCCTATATCACCAAGTTATAATTAGGGTCAGGTCAATCTAAGTTTAGGCTAAGCCTGTTATGTCCAAGAGTGTGTCATTTTCTCTATGTAGACGGAGGCAAAAATGTATCCTACTGTCCTACTCAATACTTTGTCAAGTCATAATTAAAAAAAAATCAAGAACAATTTTCCCTTCCGTCTTGGCCTACAAAAGATGATGTTAACTTGTGATGATGATGTCTAAGACATGGCCTTGGAAATTTCTGGATTATTTTTCGTCTGCCCCACATGAACAGGCATGTGATGATAATTTTTCGATATCTTGAGAAAAGTTCCCAGCGACTGGTAATTTCATGAATAACAAGCCATTTAAAGTTGTCATCTTAAACATGTGCACCCCCTTATTTATTACATCTCATTGCAGAGATCAGACGTTTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGTAGTCCTTACAGGTCACTAGGTCAGCTATCGAATGGAAGACCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATATATAAGTATCCTACTAAGCTGGAAAATTTATTTGATACTGTATTTAAAAGTTTCTTTATATTAATGAAAAACATCCTTGGAAATGCCTTACATTGACGATGGTACTCAAGTGTCCTTGATCTATTTATTTTTAGTGTTGCTAGTTTCTTAGTGTGAAGTCTTTCTCTTTAATCACTAATTTCTTTGTATTAGGATATTTTTCTAAAATGGGAAACCTAACTTCTTTAAAGTGAATGAAAGAATACACTGCAGAAAGACCGATAGCTAGCTTCAAGATATGAGTCTTTTAAGTTGTTAAAGTTTCGTCTTGGGGGCGTGAATTCAAAAATTTGTAGGGTATCTCCAAACATCCCTAGCCTTTACTGTTGGGGAACTCCTTGGTTCTAACCTCAACGACCTCAAAATATGATAAGTTGTTCTTTGTATTTGTGATTTACTTGTTTGGTTTAGTAATAAACTAAGAAGCACAAACACTTACCGCTTGGCTAATGTGTTTGCGTTAGACATGTTCGACACCTAGACACTCTAAAACTTTATGGACATGTATTAGTATCACACACTTGTTAGCACAATAGAATAAGGACGAAACATTTCTTAGGGACATATAGGACACTTTTAAACATAAGAAATTGACACAAATGGTAATAGGATAAAAATTATAGATTTTGAGAATGAAATACATCAAACTCATTTTCTAGCATATAAATGCATTCACATCAAATTTAAATTTATTTATTGTACAAAAATGATATGTTTTTCATTTTTTTTTTTAAAAAAATGCATTTCAATAACCGTGCCCTTGACTTTTAAAAAATGATGTGTTACTATGTCTGTATTACATGATATTCGTGTCCATATCCATACTTATGCTTCTTAATTACATTTTTTTTCTGCAGGGAAGTGGACATGTCCATGGTATGGGTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACACCAATAGTTAAGAGAGTCGTTAGACTTGACGTACCTGTTGACAAATATCCTAATGTAAGTCAAAATATTTTTATGTTAGGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTTGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTAACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGTACTGAAAATTTTCCTTGGTGTGGTCAAACAAATTACTTATTGCCTCACTTAAGACATAATCGATGATGCAATTTTCTGGTCAATATTTTTCTAACTGATGCTAGACATACTTTTCTCCCTTTCTCTTTTCTTTCAAATTTGAAATAATCACAACCACTCTATTACAGATTTTCGAGGGATGCCACAAGGAGATAGCCTCTCATTAAAATGTCTTTAACTTGTAGTTGTGTGTCATCTTATATGCTTTGAAATATGGATGTGGGAGCTTTGCATTTTATGTCCCAAGTCTGTCTTCATTCCAACTTCTGCTATGTACTTTATCAGTTATATTGCCATGCTGCAAACAAATTTCTTCTTGTGTAACCTTTGCCTCTTTAGCATTCCTTTCTTTTTTCCAGTAAGAGCATTCCATCTTTCATTTATTAAACACCTGAGAGTTCGCTAGGCTTCATGATCGATTTACTTATCTTTCTGACCGACAAATTTCTGCTTCTTTTTGGTTAGATGGAAACTCGATAATCTTTCACATCAAAAAGAAAACTGTTGATAGTTTTTGTGACTTTGTTTTACTGCCTTGAGTCAGAGTTCCTTTTTTCCTCTTTTTTAAGTCCTTCAATATCATTTACAATGGATCTGGATGTTGTGCGTTAGGAAGAGAAACTGAAGGACAAGCCTGGATATGAGCATCTTAATGAGCCCTTGCATCTGTTGGTTGAGGCAGAATTCCCTGAGGATACAATAAACTCACGCTTGGATCATGCAGTGGCAGTTTTAGAAAGCCTTTTGAAACCTGTGGTATGAACAAAACAGCTCAGTCATCTACAAAACTTCTCATTGTTTTCTATTAAAAGTCTTATGAGAGTTTCTGTTTTTCCAGGATGAATTGCTGGATCAATATAAGAAACAACAACTAAGAGAACTTGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCGCCGTTTAACAGCACAGGGCTCAAACGGGCCAAGACAGGGAGGTAGGACTGACGACGAGTTCTGGACAACGAGCAGCGTGGACGCTGTCTTTTCAAACCATGGTAGCTGTTTTCATCATTGAATAGGAAGTTAATGTCATGAGAGCTTTTGCTGCCTTTTCACCATATGGTCAAGAGTTCTGCTGATTTTAATCTGCTAAATCTAATATGATAGGCCTATGCTTATTTGGCTGACCACTTTTTTCCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCAATTGAAACATTATTTCATTTTTTTTCCCCTTTTTCTCTAAGGTAGTTATTTAATTTAGGTTAAATTATAAATGCAGCCCATAAACTTCAATGGTTGTGCCAATTTAGTTCTTAAATTTTTACATCTTCTCAATTACAGCTTTAGACTTCCAATTGTGATTCTATGTGTAGTTTCTGATGGTAACAGTGTTAGTTAAATGTGGTGTAGCTAAATTTTTTTGATGGGAGTATCATACCGTCTTTGTTCCCACTTGAAATTTGTTTCATAAGTATTGGTGGACTTTATACTAACGTCAATGAACTTCACTCAAGTTATATGGCAAA

mRNA sequence

TTCCCATTCCCATTCCCATTCCCATTCCCATTCCTCATCTCATTCTCTTCTCCCATTTCATTGCCACTGACTCATTGATTGCCAAGAACGAACATCACACAGTAAAATTCACAAAAACAAGAAAAAACCCACTCGCCTCGCCACGATCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCCTCCTCTTCTTTCCTATAGGGCTTTCCTTTTTCCGCCACCGCCAATACTCCCAATCCCCTTTCAATCGACTACCCTTTATCTCTTTCCCCCAGATTCATCGTCTTCTTCCCTCTTTCTGCAAAGTTTATGCGTGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTCTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTTTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGTAGTCCTTACAGGTCACTAGGTCAGCTATCGAATGGAAGACCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACACCAATAGTTAAGAGAGTCGTTAGACTTGACGTACCTGTTGACAAATATCCTAATTATAATTTTGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTAACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAACTGAAGGACAAGCCTGGATATGAGCATCTTAATGAGCCCTTGCATCTGTTGGTTGAGGCAGAATTCCCTGAGGATACAATAAACTCACGCTTGGATCATGCAGTGGCAGTTTTAGAAAGCCTTTTGAAACCTGTGGATGAATTGCTGGATCAATATAAGAAACAACAACTAAGAGAACTTGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCGCCGTTTAACAGCACAGGGCTCAAACGGGCCAAGACAGGGAGGTAGGACTGACGACGAGTTCTGGACAACGAGCAGCGTGGACGCTGTCTTTTCAAACCATGGTAGCTGTTTTCATCATTGAATAGGAAGTTAATGTCATGAGAGCTTTTGCTGCCTTTTCACCATATGGTCAAGAGTTCTGCTGATTTTAATCTGCTAAATCTAATATGATAGGCCTATGCTTATTTGGCTGACCACTTTTTTCCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCAATTGAAACATTATTTCATTTTTTTTCCCCTTTTTCTCTAAGGTAGTTATTTAATTTAGGTTAAATTATAAATGCAGCCCATAAACTTCAATGGTTGTGCCAATTTAGTTCTTAAATTTTTACATCTTCTCAATTACAGCTTTAGACTTCCAATTGTGATTCTATGTGTAGTTTCTGATGGTAACAGTGTTAGTTAAATGTGGTGTAGCTAAATTTTTTTGATGGGAGTATCATACCGTCTTTGTTCCCACTTGAAATTTGTTTCATAAGTATTGGTGGACTTTATACTAACGTCAATGAACTTCACTCAAGTTATATGGCAAA

Coding sequence (CDS)

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTCTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTTTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGTAGTCCTTACAGGTCACTAGGTCAGCTATCGAATGGAAGACCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACACCAATAGTTAAGAGAGTCGTTAGACTTGACGTACCTGTTGACAAATATCCTAATTATAATTTTGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTAACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAACTGAAGGACAAGCCTGGATATGAGCATCTTAATGAGCCCTTGCATCTGTTGGTTGAGGCAGAATTCCCTGAGGATACAATAAACTCACGCTTGGATCATGCAGTGGCAGTTTTAGAAAGCCTTTTGAAACCTGTGGATGAATTGCTGGATCAATATAAGAAACAACAACTAAGAGAACTTGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCGCCGTTTAACAGCACAGGGCTCAAACGGGCCAAGACAGGGAGGTAG

Protein sequence

MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR

Homology

[Close]

BLAST of Clc10G06740 vs. NCBI nr
Match: XP_038904738.1 (KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 5.1e-164
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEG+GHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGTGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Clc10G06740 vs. NCBI nr
Match: XP_004133720.1 (KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242.1 PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis melo] >KAE8650188.1 hypothetical protein Csa_010365 [Cucumis sativus])

HSP 1 Score: 583.6 bits (1503), Expect = 9.6e-163
Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 240

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Clc10G06740 vs. NCBI nr
Match: KAA0060582.1 (KH domain-containing protein [Cucumis melo var. makuwa] >TYK02290.1 KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 9.6e-163
Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 240

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Clc10G06740 vs. NCBI nr
Match: KAG6600718.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 582.0 bits (1499), Expect = 2.8e-162
Identity = 285/289 (98.62%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 39  MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 98

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH +GPL
Sbjct: 99  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 158

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 159 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 218

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP
Sbjct: 219 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 278

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 279 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 327

[Close]

BLAST of Clc10G06740 vs. NCBI nr
Match: XP_022942905.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_023552162.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.0 bits (1499), Expect = 2.8e-162
Identity = 285/289 (98.62%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 181

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP
Sbjct: 182 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 241

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 242 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of Clc10G06740 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.9e-101
Identity = 191/294 (64.97%), Postives = 228/294 (77.55%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CR
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCR 190

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           V+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLK
Sbjct: 191 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 250

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 288
           P+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 PMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of Clc10G06740 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-76
Identity = 159/285 (55.79%), Postives = 196/285 (68.77%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 68
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 69  GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPLQAHS 128
           G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 129 MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 188
           M W      P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRG
Sbjct: 126 MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 185

Query: 189 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 248
           KGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE 
Sbjct: 186 KGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDES 245

Query: 249 LDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
            D  K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 246 QDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Clc10G06740 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.1e-75
Identity = 155/291 (53.26%), Postives = 197/291 (67.70%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW       S     
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW------ASQFPSE 142

Query: 128 MGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALT 187
                + +  W    G  +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T
Sbjct: 143 RSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 202

Query: 188 ECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLES 247
           +CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ 
Sbjct: 203 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 262

Query: 248 LLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 288
           LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Clc10G06740 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.6e-73
Identity = 153/279 (54.84%), Postives = 192/279 (68.82%), Query Frame = 0


Query: 16  PSAHASPHRTPSIPLDRE-RYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 75
           P+ + SP +  S P D + +YLAELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 76  ---SVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPLQAHSMGWPRV 135
                D  RF   SP  S    SN        W  +  E  G   G       SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGT------SMDWQGA 130

Query: 136 QGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKD 195
              P++ +VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGSIKD
Sbjct: 131 PPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKD 190

Query: 196 ALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKK 255
             +E+KL+ KPGYEHL++PLH+L+EAEFP   I++RL HA  V+E LLKPVDE  D YK+
Sbjct: 191 PGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKR 250

Query: 256 QQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           QQLRELA+LN TLRE+SP    S+SPF++ G+KRAKTG+
Sbjct: 251 QQLRELAMLNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Clc10G06740 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-72
Identity = 151/281 (53.74%), Postives = 189/281 (67.26%), Query Frame = 0


Query: 15  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPLQAHSMG 134
            L  N T +     +H SP  S G   N R  D+ GW              GP       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 135 WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 194
           W    G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+G
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRG 218

Query: 195 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 254
           SIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D
Sbjct: 219 SIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHD 278

Query: 255 QYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 288
            YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 MYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of Clc10G06740 vs. ExPASy TrEMBL
Match: A0A5D3BT43 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00980 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.7e-163
Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 240

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Clc10G06740 vs. ExPASy TrEMBL
Match: A0A0A0L3B7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.7e-163
Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 111 MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 170

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMGPL
Sbjct: 171 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 230

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 231 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 290

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 291 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 350

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 351 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 399

[Close]

BLAST of Clc10G06740 vs. ExPASy TrEMBL
Match: A0A1S3BST0 (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.7e-163
Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKP
Sbjct: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKP 240

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Clc10G06740 vs. ExPASy TrEMBL
Match: A0A6J1FX42 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3662 GN=LOC111447793 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.4e-162
Identity = 285/289 (98.62%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 181

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP
Sbjct: 182 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 241

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 242 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of Clc10G06740 vs. ExPASy TrEMBL
Match: A0A6J1JCV7 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=3661 GN=LOC111485631 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.0e-162
Identity = 284/289 (98.27%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 181

Query: 181 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 240
           YIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP
Sbjct: 182 YIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 241

Query: 241 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
           VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 242 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of Clc10G06740 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 369.0 bits (946), Expect = 3.5e-102
Identity = 191/294 (64.97%), Postives = 228/294 (77.55%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CR
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCR 190

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           V+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLK
Sbjct: 191 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 250

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 288
           P+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 PMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of Clc10G06740 vs. TAIR 10
Match: AT1G09660.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.3e-85
Identity = 156/242 (64.46%), Postives = 188/242 (77.69%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CR
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCR 190

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           V+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLK
Sbjct: 191 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 247

Query: 241 PV 242
           P+
Sbjct: 251 PM 247

[Close]

BLAST of Clc10G06740 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.0e-77
Identity = 159/285 (55.79%), Postives = 196/285 (68.77%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 68
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 69  GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPLQAHS 128
           G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 129 MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 188
           M W      P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRG
Sbjct: 126 MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 185

Query: 189 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 248
           KGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE 
Sbjct: 186 KGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDES 245

Query: 249 LDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290
            D  K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 246 QDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Clc10G06740 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-76
Identity = 155/291 (53.26%), Postives = 197/291 (67.70%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW       S     
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW------ASQFPSE 142

Query: 128 MGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALT 187
                + +  W    G  +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T
Sbjct: 143 RSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 202

Query: 188 ECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLES 247
           +CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ 
Sbjct: 203 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 262

Query: 248 LLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 288
           LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Clc10G06740 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 274.6 bits (701), Expect = 8.9e-74
Identity = 151/281 (53.74%), Postives = 189/281 (67.26%), Query Frame = 0


Query: 15  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGPLQAHSMG 134
            L  N T +     +H SP  S G   N R  D+ GW              GP       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 135 WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 194
           W    G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+G
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRG 218

Query: 195 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 254
           SIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D
Sbjct: 219 SIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHD 278

Query: 255 QYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 288
            YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 MYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Clc10G06740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904738.1	5.1e-164	99.65	KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida]	[more]
XP_004133720.1	9.6e-163	98.96	KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242...	[more]
KAA0060582.1	9.6e-163	98.96	KH domain-containing protein [Cucumis melo var. makuwa] >TYK02290.1 KH domain-co...	[more]
KAG6600718.1	2.8e-162	98.62	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022942905.1	2.8e-162	98.62	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_0...	[more]

BLAST of Clc10G06740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR3	4.9e-101	64.97	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]
Q8GYR4	1.4e-76	55.79	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q0WLR1	2.1e-75	53.26	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q75GR5	5.6e-73	54.84	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	1.3e-72	53.74	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Clc10G06740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BT43	4.7e-163	98.96	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L3B7	4.7e-163	98.96	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=...	[more]
A0A1S3BST0	4.7e-163	98.96	KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1FX42	1.4e-162	98.62	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1JCV7	3.0e-162	98.27	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=366...	[more]

BLAST of Clc10G06740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09660.1	3.5e-102	64.97	RNA-binding KH domain-containing protein	[more]
AT1G09660.2	2.3e-85	64.46	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	1.0e-77	55.79	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.5e-76	53.26	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	8.9e-74	53.74	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 139..239 e-value: 0.0017 score: 27.6
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 34..68 e-value: 3.5E-10 score: 39.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 28..271 e-value: 1.4E-68 score: 233.0
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 145..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 8..289
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 144..264 e-value: 8.71747E-51 score: 161.258
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 8..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G06740.1	Clc10G06740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding