Clc10G06410 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G06410
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	plant intracellular Ras-group-related LRR protein 6
Location	ClcChr10: 8668545 .. 8670302 (+)
RNA-Seq Expression	Clc10G06410
Synteny	Clc10G06410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTCTCATTCAGGGAAGCATTAACAGTACTGGAAGAAAAGAAATCATGGATCATAGTCATAATGTTGGGCTTAAGAGTAAGTAAAAAGATTTGAAGAATTCAGCAGCAAAACCATAAGGACCAGGAGACTTGTTTGACCCCAAAAAGGAAATTGCATGAAAAACCTCTGCTTCAGTAAAAGGAACTTCAATCCCAATTGTCTGTTCACAGCTCCAGTCAAGATTCAAAACATCCTTTGTAAACAATTCGTACAAAAATCAGTAAATTCAGTCTCAAGATCACTGGCTGACTAGAGGCTCTGGAAAGGATTTCAGTAATTGAGCTTCTATGCTTGGCAGCTAGAATTCGATGAAAAAAACTTGTTTTCATCACCCTTCTTAAGCCAATTTAATTTATAGCGTTGATGCCAATAAATATGCTCTTGAGCCGTCAACAATTTAATCTATTCTCTGAGCAACTGCGGATGTTTTCATCGCCCTCCTTAAACCTACTATTACTCATTTATTAAGAAACATAAGTTTTGTTAACCATCCCGTTACTTGTTTTAAATATATATATATATATATATATATATATATTTTTGGAGTATTCCTAAAATAGTGTTTCAGAAAATATATAAAAAAAAATAGTTTCTCTCTATTCTATTTCTGCTTTAAGGAGCTTTCTCTAGAAGGGCAAGGGCTAAGTGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGTCAAAAATCTGTGAATATTCTTGCTGCAGTCAAATAAAGCCTCAATAGATGCAGAAACTTAGGCCAGCCAGTTTGATATTCACGAGTATGAAGGTCAAATTTCCTTCTCGTTATCACTGCATTTTGCATGTGTTTTTCATGGTAAATAAAATGTGCAGGACTTTGCCTAAAATACCGATTCAGATGGATGCAGGATTAGCTCTGAAAGTCAAGTAGTTTAGCTATTTTTAGTTAAGTCTTTTCAAGTAATTGAATGCCATTAATTCATCAAATACATGCAGACCTTGATTTTGTCTAGGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGGTAAAAAGTAATTCATGTATGTACCCTGCTTTTGTTTCTTTTTATTGTTATTATTTTTATTTTAAATTAGAGAGATGTTCTAGAGTTTGAATTGTACGTTGGCATTTTAAAAGAAGGTTTTTGTTGATACTTAGACTTCTTTCTTAAATTCTGTAATATGCTATTTTCTCAAAGGATTTAGCTACATTGTTGTATTTTTAAGGTCATACATTCATTATTCAATGATAGACTGGTGGCATAGTTTTGAAGTTTTGCATTATTTTAAATTTATTGTTTCCTGACATTCTGGACTGGCCCCTCCTTTTTAATGTCTTGAATGCTGAATGGTCGACTGTTCTCCTGTTATTGGCTTCTTTACTTATAAAACTCTAACCAGGTGATGTTACTTGATTTTGTAGATTCCGTCAGATGGGTTTTAAGCAATCTCCATGCTACAGGTTTTAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTTTCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

mRNA sequence

ATGTATGTCTCATTCAGGGAAGCATTAACAGTACTGGAAGAAAAGAAATCATGGATCATAGTCATAATGTTGGGCTTAAGAGAGCTTTCTCTAGAAGGGCAAGGGCTAAGTGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGACTTTGCCTAAAATACCGATTCAGATGGATGCAGGATTAGCTCTGAAAGTCAAGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGGTTTTAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTTTCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

Coding sequence (CDS)

ATGTATGTCTCATTCAGGGAAGCATTAACAGTACTGGAAGAAAAGAAATCATGGATCATAGTCATAATGTTGGGCTTAAGAGAGCTTTCTCTAGAAGGGCAAGGGCTAAGTGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGACTTTGCCTAAAATACCGATTCAGATGGATGCAGGATTAGCTCTGAAAGTCAAGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGGTTTTAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTTTCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

Protein sequence

MYVSFREALTVLEEKKSWIIVIMLGLRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKVKNKIKDWPGAILKSLPNLMCLKLDNNPLKQVLDLSGNIASLPEHPTFSSVPLLQELYVRLVHKKLGYFPALQDSCHTYLCRVLMY

Homology

[Close]

BLAST of Clc10G06410 vs. NCBI nr
Match: XP_038905189.1 (plant intracellular Ras-group-related LRR protein 6 isoform X2 [Benincasa hispida])

HSP 1 Score: 165.2 bits (417), Expect = 4.6e-37
Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           ++LSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L+     +NK
Sbjct: 361 KDLSLEGQGLSAVPSEVWESSELMKLDLSKNSLQEL-----PVELSSCTSLQTLILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILKSLPNL+CLKLDNNPLK             QVLDLSGNIASLPEHPTFSS+
Sbjct: 421 IKDWPGAILKSLPNLICLKLDNNPLKQIPSDGFQAVSMLQVLDLSGNIASLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. NCBI nr
Match: XP_038905186.1 (plant intracellular Ras-group-related LRR protein 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 165.2 bits (417), Expect = 4.6e-37
Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           ++LSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L+     +NK
Sbjct: 376 KDLSLEGQGLSAVPSEVWESSELMKLDLSKNSLQEL-----PVELSSCTSLQTLILSRNK 435

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILKSLPNL+CLKLDNNPLK             QVLDLSGNIASLPEHPTFSS+
Sbjct: 436 IKDWPGAILKSLPNLICLKLDNNPLKQIPSDGFQAVSMLQVLDLSGNIASLPEHPTFSSL 495

[Close]

BLAST of Clc10G06410 vs. NCBI nr
Match: TYK23805.1 (plant intracellular Ras-group-related LRR protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-36
Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQEL-----PVELSSCTSLQILILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILK+LPNL CLKLDNNPLK             QVLDLSGNIA LPEHPTFSS+
Sbjct: 421 IKDWPGAILKTLPNLTCLKLDNNPLKQISSDGFQAVSMLQVLDLSGNIACLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. NCBI nr
Match: XP_008452268.1 (PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-36
Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQEL-----PVELSSCTSLQILILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILK+LPNL CLKLDNNPLK             QVLDLSGNIA LPEHPTFSS+
Sbjct: 421 IKDWPGAILKTLPNLTCLKLDNNPLKQISSDGFQAVSMLQVLDLSGNIACLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. NCBI nr
Match: XP_023552345.1 (plant intracellular Ras-group-related LRR protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 3.9e-36
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWE SELMKL+LSKNSLQ+L     P+++ +  +L+     +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWECSELMKLDLSKNSLQEL-----PVELSSCTSLQTLILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILKSLPNLMCLKLDNNPLK             QVLDLSGNI SLPEHPTFSS+
Sbjct: 421 IKDWPGAILKSLPNLMCLKLDNNPLKQIQSHGFQETPMLQVLDLSGNIDSLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. ExPASy Swiss-Prot
Match: Q6K7R2 (Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL6 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.1e-20
Identity = 59/140 (42.14%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 22  IMLGLRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKVKN 81
           + L  +EL L G G+++VP   WE++++MKL+LSKNS++DL   ++ +       +   N
Sbjct: 358 LSLSSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLP-NELSLCSSLQSLILSNN 417

Query: 82  KIKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSS 141
           KIK WPG +  SL +L  LKLDNNPL              +VLDLSG+ +SLPE    S 
Sbjct: 418 KIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSK 477

Query: 142 VPLLQELYVRLVHKKLGYFP 149
           +P L+ELY+R    KL  FP
Sbjct: 478 LPHLKELYLR--RMKLHGFP 494

[Close]

BLAST of Clc10G06410 vs. ExPASy Swiss-Prot
Match: Q8TCA0 (Leucine-rich repeat-containing protein 20 OS=Homo sapiens OX=9606 GN=LRRC20 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.2e-04
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 26  LRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KN 85
           LREL LEG  L  +PSEV     L  ++LS+N  QD      P Q+ A  AL+     +N
Sbjct: 76  LRELHLEGNFLHRLPSEVSALQHLKAIDLSRNQFQD-----FPEQLTALPALETINLEEN 135

Query: 86  KIKDWPGAILKSLPNLMCLKLDNNPL 108
           +I D P   L ++P L  + L  NPL
Sbjct: 136 EIVDVPVEKLAAMPALRSINLRFNPL 156

[Close]

BLAST of Clc10G06410 vs. ExPASy TrEMBL
Match: A0A5D3DJP1 (Plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold580G00180 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.5e-37
Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQEL-----PVELSSCTSLQILILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILK+LPNL CLKLDNNPLK             QVLDLSGNIA LPEHPTFSS+
Sbjct: 421 IKDWPGAILKTLPNLTCLKLDNNPLKQISSDGFQAVSMLQVLDLSGNIACLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. ExPASy TrEMBL
Match: A0A1S3BTH8 (plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo OX=3656 GN=LOC103493340 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.5e-37
Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQEL-----PVELSSCTSLQILILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILK+LPNL CLKLDNNPLK             QVLDLSGNIA LPEHPTFSS+
Sbjct: 421 IKDWPGAILKTLPNLTCLKLDNNPLKQISSDGFQAVSMLQVLDLSGNIACLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. ExPASy TrEMBL
Match: A0A0A0L2M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104350 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.2e-36
Identity = 87/129 (67.44%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWESSELMKL+LSKNS Q+L     P+++ +  +L+     +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQEL-----PVELSSCTSLQTLILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILK+LPNL CLKLDNNPLK             QVLDLSGNIA LPEHPTFSS+
Sbjct: 421 IKDWPGAILKTLPNLTCLKLDNNPLKQIPSDGFQAVSKLQVLDLSGNIACLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. ExPASy TrEMBL
Match: A0A6J1ENG2 (plant intracellular Ras-group-related LRR protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111435942 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.2e-35
Identity = 88/129 (68.22%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLSAVPSEVWE SELMKL+LSKNSLQ+L     P ++ +  +L+     +NK
Sbjct: 361 KELSLEGQGLSAVPSEVWECSELMKLDLSKNSLQEL-----PGELSSCTSLQTLILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILKSLPNLMCLKLDNNPLK             QVLDLSGNI SLPEHPTFSS+
Sbjct: 421 IKDWPGAILKSLPNLMCLKLDNNPLKQIPSYGFQETPMLQVLDLSGNIDSLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. ExPASy TrEMBL
Match: A0A6J1CM00 (plant intracellular Ras-group-related LRR protein 6 OS=Momordica charantia OX=3673 GN=LOC111012848 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.7e-35
Identity = 85/129 (65.89%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEGQGLS VPSEVWES ELMKL+LSKNS+Q+L     P+++ +  +L+     +NK
Sbjct: 361 KELSLEGQGLSTVPSEVWESCELMKLDLSKNSIQEL-----PVELSSCTSLQTLILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 139
           IKDWPGAILKSLPNL+CLKLDNNPLK             QVLDLS NI SLPEHPTFSS+
Sbjct: 421 IKDWPGAILKSLPNLVCLKLDNNPLKQIPSDGFQAVSMLQVLDLSANIGSLPEHPTFSSL 480

[Close]

BLAST of Clc10G06410 vs. TAIR 10
Match: AT3G15410.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEG  LS VPSEVWES E+ K+NLSKNS+++L     P Q+   ++L+     +NK
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEEL-----PAQLSTSVSLQTLILSRNK 420

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 138
           IKDWPGAILKSLPNLMCLKLDNNPL              Q+LDLS N  S  EHP F  +
Sbjct: 421 IKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHL 480

[Close]

BLAST of Clc10G06410 vs. TAIR 10
Match: AT3G15410.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 27  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNK 86
           +ELSLEG  LS VPSEVWES E+ K+NLSKNS+++L     P Q+   ++L+     +NK
Sbjct: 367 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEEL-----PAQLSTSVSLQTLILSRNK 426

Query: 87  IKDWPGAILKSLPNLMCLKLDNNPLK-------------QVLDLSGNIASLPEHPTFSSV 138
           IKDWPGAILKSLPNLMCLKLDNNPL              Q+LDLS N  S  EHP F  +
Sbjct: 427 IKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHL 486

The following BLAST results are available for this feature:

BLAST of Clc10G06410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905189.1	4.6e-37	68.99	plant intracellular Ras-group-related LRR protein 6 isoform X2 [Benincasa hispid...	[more]
XP_038905186.1	4.6e-37	68.99	plant intracellular Ras-group-related LRR protein 6 isoform X1 [Benincasa hispid...	[more]
TYK23805.1	1.3e-36	68.22	plant intracellular Ras-group-related LRR protein 6 [Cucumis melo var. makuwa]	[more]
XP_008452268.1	1.3e-36	68.22	PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo]	[more]
XP_023552345.1	3.9e-36	68.22	plant intracellular Ras-group-related LRR protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc10G06410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K7R2	4.1e-20	42.14	Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japon...	[more]
Q8TCA0	9.2e-04	39.53	Leucine-rich repeat-containing protein 20 OS=Homo sapiens OX=9606 GN=LRRC20 PE=1...	[more]

BLAST of Clc10G06410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJP1	6.5e-37	68.22	Plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BTH8	6.5e-37	68.22	plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0L2M1	4.2e-36	67.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104350 PE=4 SV=1	[more]
A0A6J1ENG2	1.2e-35	68.22	plant intracellular Ras-group-related LRR protein 6 OS=Cucurbita moschata OX=366...	[more]
A0A6J1CM00	2.7e-35	65.89	plant intracellular Ras-group-related LRR protein 6 OS=Momordica charantia OX=36...	[more]

BLAST of Clc10G06410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15410.1	2.6e-30	55.47	Leucine-rich repeat (LRR) family protein	[more]
AT3G15410.2	2.6e-30	55.47	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 7..159 e-value: 1.7E-11 score: 45.2
None	No IPR available	PANTHER	PTHR16083:SF20	LRR RECEPTOR-LIKE KINASE	coord: 80..140
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 80..140
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 23..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G06410.1	Clc10G06410.1	mRNA