Clc10G05970 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G05970
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	(+)-gamma-cadinene synthase-like
Location	ClcChr10: 7788593 .. 7789222 (+)
RNA-Seq Expression	Clc10G05970
Synteny	Clc10G05970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

tttgcactacttgcaactatttcatttgtttgcatgggagacattgcaacaaaagaggtatttgattggctttcagacaaacccaaaattcttaaggcttcgtgcatcatttgtagactcatggacgattttgtctcctccaaggtatgtgtcactcactacttgaaataagtcagcaataaaacatcatcgatatgtcaaaataaaattaatgtatatttactttcttttttgtagtttgagcaagaaagagaacatgttctttccgcggctgaatgttacatggacaattatggctgctcagaaggagaaacacatgctgaatttcgaaagcaattagaagatgcatggaagaatataaatgaaagttgccttcgtccaatgactgttccaatgccatttttattgcgtgtattgaatcttagcagagttatagccctactttattgtgatgaggatggatacacaaattccaagggtaggactaaacttcttatccagtctatacttgttgacccagtgtgattttcactacttagcaactaaaagggttagtgaaatccaatatttctatgctccaattgtgttgtaacatgtaatgtatttaatttgaaaggtcgcctttgttat

mRNA sequence

tttgcactacttgcaactatttcatttgtttgcatgggagacattgcaacaaaagaggtatttgattggctttcagacaaacccaaaattcttaaggcttcgtgcatcatttgtagactcatggacgattttgtctcctccaagtttgagcaagaaagagaacatgttctttccgcggctgaatgttacatggacaattatggctgctcagaaggagaaacacatgctgaatttcgaaagcaattagaagatgcatggaagaatataaatgaaagttgccttcgtccaatgactgttccaatgccatttttattgcgtgtattgaatcttagcagagttatagccctactttattgtgatgaggatggatacacaaattccaagggtaggactaaacttcttatccagtctatacttgttgacccagtgtgattttcactacttagcaactaaaagggttagtgaaatccaatatttctatgctccaattgtgttgtaacatgtaatgtatttaatttgaaaggtcgcctttgttat

Coding sequence (CDS)

atgggagacattgcaacaaaagaggtatttgattggctttcagacaaacccaaaattcttaaggcttcgtgcatcatttgtagactcatggacgattttgtctcctccaagtttgagcaagaaagagaacatgttctttccgcggctgaatgttacatggacaattatggctgctcagaaggagaaacacatgctgaatttcgaaagcaattagaagatgcatggaagaatataaatgaaagttgccttcgtccaatgactgttccaatgccatttttattgcgtgtattgaatcttagcagagttatagccctactttattgtgatgaggatggatacacaaattccaagggtaggactaaacttcttatccagtctatacttgttgacccagtgtga

Protein sequence

MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

Homology

[Close]

BLAST of Clc10G05970 vs. NCBI nr
Match: XP_038905757.1 ((+)-gamma-cadinene synthase-like [Benincasa hispida])

HSP 1 Score: 212.2 bits (539), Expect = 2.7e-51
Identity = 102/131 (77.86%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIATKEVFDWLS+ PKIL+AS II RL +D VS KFE++REHV+SA ECYM NYGCSE
Sbjct: 431 MGDIATKEVFDWLSECPKILEASTIISRLTNDVVSYKFEKQREHVVSATECYMYNYGCSE 490

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET AEFRK++EDAWKNINE CL P TVPMPFLL VLNL+RVIA LY DEDGYTNSKG T
Sbjct: 491 EETCAEFRKRVEDAWKNINECCLHPATVPMPFLLCVLNLTRVIAFLYSDEDGYTNSKGNT 550

Query: 121 KLLIQSILVDP 132
           KL+IQS+LV+P
Sbjct: 551 KLVIQSLLVEP 561

[Close]

BLAST of Clc10G05970 vs. NCBI nr
Match: NP_001315388.1 ((+)-gamma-cadinene synthase-like [Cucumis melo] >AJD19682.1 sesquiterpene synthase Tps1 [Cucumis melo])

HSP 1 Score: 211.5 bits (537), Expect = 4.5e-51
Identity = 100/132 (75.76%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIATKE+FDWL D PKILKAS  I RLMDD VS KFE+EREHV+SA ECYM+NYGCSE
Sbjct: 437 MGDIATKEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET A+  KQ+EDAWK IN+ CL PMTVP+PFL+ VLNL+RV+ALLY  EDGYTNSKGRT
Sbjct: 497 EETCADLLKQVEDAWKTINKCCLHPMTVPIPFLICVLNLTRVMALLYSGEDGYTNSKGRT 556

Query: 121 KLLIQSILVDPV 133
           KLLIQS+L+DP+
Sbjct: 557 KLLIQSLLIDPL 568

[Close]

BLAST of Clc10G05970 vs. NCBI nr
Match: XP_022142732.1 ((+)-gamma-cadinene synthase-like [Momordica charantia])

HSP 1 Score: 207.6 bits (527), Expect = 6.5e-50
Identity = 97/132 (73.48%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIAT+EVFDWLS  PKI++AS +I RLMDD +S KFEQ+REHV+SA ECYM+ YGCSE
Sbjct: 427 MGDIATREVFDWLSKHPKIIEASTMISRLMDDVMSYKFEQQREHVVSAVECYMEQYGCSE 486

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E   EF KQ+ +AWK+INE+CL P TVPM FL+RVLNLSRV+ALLY DEDGYTNSKGRT
Sbjct: 487 EEACVEFNKQVAEAWKDINEACLHPTTVPMIFLMRVLNLSRVMALLYVDEDGYTNSKGRT 546

Query: 121 KLLIQSILVDPV 133
           K LI+S+LVDPV
Sbjct: 547 KFLIESLLVDPV 558

[Close]

BLAST of Clc10G05970 vs. NCBI nr
Match: XP_038903601.1 ((+)-gamma-cadinene synthase-like [Benincasa hispida])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 96/132 (72.73%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGD+AT+EVFDW+ + PKIL+AS II RLMDD VS +FE++REHV SA ECYM++YGCS+
Sbjct: 419 MGDVATQEVFDWVFECPKILEASTIIARLMDDLVSYEFEKQREHVASAVECYMNSYGCSK 478

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET+AEF+K++EDAWKNINE  L P +VPMPFLL VLNL+RVIALLY DEDGYTN+KGRT
Sbjct: 479 EETYAEFKKKVEDAWKNINECSLHPASVPMPFLLCVLNLTRVIALLYSDEDGYTNAKGRT 538

Query: 121 KLLIQSILVDPV 133
           K+LIQS+LV+PV
Sbjct: 539 KVLIQSLLVEPV 550

[Close]

BLAST of Clc10G05970 vs. NCBI nr
Match: KAE8650158.1 (hypothetical protein Csa_009547 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 5.5e-49
Identity = 98/132 (74.24%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIATKEVF+WL D PKILKAS  I RLMDD VS KFE+EREH++SA ECYM N+G SE
Sbjct: 434 MGDIATKEVFEWLFDCPKILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET AE  KQ+EDAWK INE CL PM VPMPFL+ +LNL+RV+ALLY  EDGYTNSKGRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KLLIQSILVDPV 133
           KLLIQS+L+DP+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of Clc10G05970 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-43
Identity = 85/133 (63.91%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 1   MGD-IATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCS 60
           +GD I T EV  WLS+ P+I+KAS IICRLMDD  S KFEQEREHV SA ECYM  Y CS
Sbjct: 437 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVECYMKQYDCS 496

Query: 61  EGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGR 120
           E E   E  K++ DAWK+ NE+  RP  VP+P L+RVLN SRVI LLY DEDGYTN+K  
Sbjct: 497 EEEACIELHKEVVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLYLDEDGYTNAKSG 556

Query: 121 TKLLIQSILVDPV 133
           TK LI+S+LVDP+
Sbjct: 557 TKFLIKSLLVDPL 569

[Close]

BLAST of Clc10G05970 vs. ExPASy Swiss-Prot
Match: B5A435 (Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-40
Identity = 78/132 (59.09%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MG+IA+KE FDWL   P +++AS  +CRLMDD  S KFEQER HV S  ECYM  YG +E
Sbjct: 426 MGEIASKEAFDWLFSHPPVIEASESVCRLMDDMRSHKFEQERGHVASGIECYMKQYGVTE 485

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E H EFRKQL  AWK+INE CLRP  VP P L+R+LNL+RVI ++Y +EDGYT+ K   
Sbjct: 486 EEAHDEFRKQLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 545

Query: 121 KLLIQSILVDPV 133
           K  I S+L+DP+
Sbjct: 546 KDNIASLLIDPM 557

[Close]

BLAST of Clc10G05970 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-40
Identity = 77/132 (58.33%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGD  TKE FDW+  KPKI++AS I+CRLMDD V  KFEQ+R HV SA ECYM  +G SE
Sbjct: 424 MGDAVTKESFDWIFSKPKIVRASAIVCRLMDDMVFHKFEQKRGHVASAVECYMKQHGASE 483

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET  EF + + +AWK+INE CL P  VPMP L+RVLNL+RVI ++Y +EDGYT+     
Sbjct: 484 QETPNEFPQPVREAWKDINEECLIPTAVPMPILMRVLNLARVIDVIYKNEDGYTHFGAVL 543

Query: 121 KLLIQSILVDPV 133
           K  + S+L+DPV
Sbjct: 544 KDFVTSMLIDPV 555

[Close]

BLAST of Clc10G05970 vs. ExPASy Swiss-Prot
Match: F6M8H7 (Probable sesquiterpene synthase OS=Santalum murrayanum OX=453085 GN=STPS PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38
Identity = 77/132 (58.33%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MG+IA+KE FDWL   P +++AS  + RLMDD  S KFEQER HV S  ECYM  YG +E
Sbjct: 429 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDMRSHKFEQERGHVASGIECYMKQYGVTE 488

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E H EFRK+L  AWK+INE CLRP  VP P L R+LNL+RVI ++Y +EDGYT+ K   
Sbjct: 489 EEAHDEFRKRLVKAWKDINEECLRPYRVPKPLLTRILNLTRVIDVIYKNEDGYTHVKKAM 548

Query: 121 KLLIQSILVDPV 133
           K  I S+L+DPV
Sbjct: 549 KDNIASLLIDPV 560

[Close]

BLAST of Clc10G05970 vs. ExPASy Swiss-Prot
Match: F6M8H5 (Probable sesquiterpene synthase OS=Santalum austrocaledonicum OX=293154 GN=SesquiTPS PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-37
Identity = 75/132 (56.82%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MG+IA+KE FDWL   P +++AS  + RLMDD  S KFEQER HV S  ECYM  YG +E
Sbjct: 429 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDTRSHKFEQERGHVASGIECYMKQYGVTE 488

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E   EFRK+L  AWK+INE CLRP  VP P L+R+LNL+RVI ++Y +EDGYT+ K   
Sbjct: 489 EEARDEFRKRLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 548

Query: 121 KLLIQSILVDPV 133
           K  I S+L+DP+
Sbjct: 549 KDNIASLLIDPM 560

[Close]

BLAST of Clc10G05970 vs. ExPASy TrEMBL
Match: A0A1S4DZR2 ((+)-gamma-cadinene synthase-like OS=Cucumis melo OX=3656 GN=LOC103493390 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 100/132 (75.76%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIAT+E+FDWL D PKILKAS  I RLMDD VS KFE+EREHV+SA ECYM+NYGCSE
Sbjct: 437 MGDIATEEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET A   KQ++DAWKNIN+ CL PMTVP+PFL+ VLNL+RV+ALLY DEDGYTNSKGRT
Sbjct: 497 EETCANLLKQVKDAWKNINKCCLHPMTVPVPFLVCVLNLTRVMALLYSDEDGYTNSKGRT 556

Query: 121 KLLIQSILVDPV 133
           KLLIQS+L+DP+
Sbjct: 557 KLLIQSLLIDPL 568

[Close]

BLAST of Clc10G05970 vs. ExPASy TrEMBL
Match: A0A0B4VEV4 (Sesquiterpene synthase Tps1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.2e-51
Identity = 100/132 (75.76%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIATKE+FDWL D PKILKAS  I RLMDD VS KFE+EREHV+SA ECYM+NYGCSE
Sbjct: 437 MGDIATKEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET A+  KQ+EDAWK IN+ CL PMTVP+PFL+ VLNL+RV+ALLY  EDGYTNSKGRT
Sbjct: 497 EETCADLLKQVEDAWKTINKCCLHPMTVPIPFLICVLNLTRVMALLYSGEDGYTNSKGRT 556

Query: 121 KLLIQSILVDPV 133
           KLLIQS+L+DP+
Sbjct: 557 KLLIQSLLIDPL 568

[Close]

BLAST of Clc10G05970 vs. ExPASy TrEMBL
Match: A0A6J1CNP6 ((+)-gamma-cadinene synthase-like OS=Momordica charantia OX=3673 GN=LOC111012779 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50
Identity = 97/132 (73.48%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIAT+EVFDWLS  PKI++AS +I RLMDD +S KFEQ+REHV+SA ECYM+ YGCSE
Sbjct: 427 MGDIATREVFDWLSKHPKIIEASTMISRLMDDVMSYKFEQQREHVVSAVECYMEQYGCSE 486

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E   EF KQ+ +AWK+INE+CL P TVPM FL+RVLNLSRV+ALLY DEDGYTNSKGRT
Sbjct: 487 EEACVEFNKQVAEAWKDINEACLHPTTVPMIFLMRVLNLSRVMALLYVDEDGYTNSKGRT 546

Query: 121 KLLIQSILVDPV 133
           K LI+S+LVDPV
Sbjct: 547 KFLIESLLVDPV 558

[Close]

BLAST of Clc10G05970 vs. ExPASy TrEMBL
Match: A0A0A0L579 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G097040 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 98/132 (74.24%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIATKEVF+WL D PKILKAS  I RLMDD VS KFE+EREH++SA ECYM N+G SE
Sbjct: 434 MGDIATKEVFEWLFDCPKILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET AE  KQ+EDAWK INE CL PM VPMPFL+ +LNL+RV+ALLY  EDGYTNSKGRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KLLIQSILVDPV 133
           KLLIQS+L+DP+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of Clc10G05970 vs. ExPASy TrEMBL
Match: Q66PX8 (Beta-caryophyllene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.8e-49
Identity = 97/132 (73.48%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MGDIATKEVF+WL D P+ILKAS  I RLMDD VS KFE+EREH++SA ECYM N+G SE
Sbjct: 434 MGDIATKEVFEWLFDCPQILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            ET AE  KQ+EDAWK INE CL PM VPMPFL+ +LNL+RV+ALLY  EDGYTNSKGRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KLLIQSILVDPV 133
           KLLIQS+L+DP+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of Clc10G05970 vs. TAIR 10
Match: AT5G23960.1 (terpene synthase 21 )

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           M D+A  + F+WLS  PKI  AS II R  DD  S +FE +REHV +  +CYM  +G S+
Sbjct: 415 MTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSK 474

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
                     + DAWK++N+  +RP   P P L+RVLNLSRVI + Y  +D YTN K   
Sbjct: 475 ERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPK-LL 534

Query: 121 KLLIQSILVDPV 133
           K  I S+L++ +
Sbjct: 535 KEHIVSLLIETI 545

[Close]

BLAST of Clc10G05970 vs. TAIR 10
Match: AT5G23960.2 (terpene synthase 21 )

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           M D+A  + F+WLS  PKI  AS II R  DD  S +FE +REHV +  +CYM  +G S+
Sbjct: 413 MTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSK 472

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
                     + DAWK++N+  +RP   P P L+RVLNLSRVI + Y  +D YTN K   
Sbjct: 473 ERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPK-LL 532

Query: 121 KLLIQSILVDPV 133
           K  I S+L++ +
Sbjct: 533 KEHIVSLLIETI 543

[Close]

BLAST of Clc10G05970 vs. TAIR 10
Match: AT5G44630.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 43/132 (32.58%), Postives = 76/132 (57.58%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           +G+I  KE F+WL  +PK+++      RLMDD    + + E+ +  +A   YM+ +G ++
Sbjct: 424 LGEIGKKEAFEWLISRPKLVRILGAKTRLMDDIADFEEDMEKGYTANALNYYMNEHGVTK 483

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E   E  K   D  K +NE CL+  T+P   L++ +N +R + +LY  +D Y + +G+ 
Sbjct: 484 EEASRELEKMNGDMNKIVNEECLKITTMPRRILMQSVNYARSLDVLYTADDVYNHREGKL 543

Query: 121 KLLIQSILVDPV 133
           K  ++ +LVDP+
Sbjct: 544 KEYMRLLLVDPI 555

[Close]

BLAST of Clc10G05970 vs. TAIR 10
Match: AT4G20200.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19
Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MG +ATKE F+WL  +PK+++   I  RLM+D +  + +  R +V +A  CYM  YG ++
Sbjct: 471 MGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGYVTNAVNCYMKQYGVTK 530

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E   E  K +  A K +NE  L    VP   L   ++L+R++ + Y   +G+TN +G+ 
Sbjct: 531 EEAFRELYKIVVAANKTLNEEFLSTTGVPHFLLKATIDLARMMTVAYNVNEGFTNPQGKI 590

Query: 121 KLLIQSILVDPV 133
           K  + S+ VD +
Sbjct: 591 KEYMTSMFVDQI 602

[Close]

BLAST of Clc10G05970 vs. TAIR 10
Match: AT3G29190.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-18
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 1   MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSE 60
           MG I  KE + WL  +PKI++A  I  RLM+D    K +  R +  +A  CYM  Y  +E
Sbjct: 468 MGKIVPKEDYKWLKSRPKIIQALAIKGRLMNDMKGYKEDMSRGYAANAVTCYMKQYRVTE 527

Query: 61  GETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDEDGYTNSKGRT 120
            E   EF K +  A K +NE  L  M V    L   + +  +I++ Y +++GYT+ +G+ 
Sbjct: 528 QEALKEFEKMVAVANKTVNEEFLTTMGVSRLVLKLAMGVGLMISITYSEDEGYTHPEGKI 587

Query: 121 KLLIQSILVDPV 133
           K  + ++ VD +
Sbjct: 588 KEKMTTLFVDQI 599

The following BLAST results are available for this feature:

BLAST of Clc10G05970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905757.1	2.7e-51	77.86	(+)-gamma-cadinene synthase-like [Benincasa hispida]	[more]
NP_001315388.1	4.5e-51	75.76	(+)-gamma-cadinene synthase-like [Cucumis melo] >AJD19682.1 sesquiterpene syntha...	[more]
XP_022142732.1	6.5e-50	73.48	(+)-gamma-cadinene synthase-like [Momordica charantia]	[more]
XP_038903601.1	1.1e-49	72.73	(+)-gamma-cadinene synthase-like [Benincasa hispida]	[more]
KAE8650158.1	5.5e-49	74.24	hypothetical protein Csa_009547 [Cucumis sativus]	[more]

BLAST of Clc10G05970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2KSJ5	2.8e-43	63.91	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
B5A435	1.7e-40	59.09	Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1	[more]
Q6Q3H3	4.9e-40	58.33	(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S...	[more]
F6M8H7	1.2e-38	58.33	Probable sesquiterpene synthase OS=Santalum murrayanum OX=453085 GN=STPS PE=3 SV...	[more]
F6M8H5	1.7e-37	56.82	Probable sesquiterpene synthase OS=Santalum austrocaledonicum OX=293154 GN=Sesqu...	[more]

BLAST of Clc10G05970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZR2	1.3e-51	75.76	(+)-gamma-cadinene synthase-like OS=Cucumis melo OX=3656 GN=LOC103493390 PE=4 SV...	[more]
A0A0B4VEV4	2.2e-51	75.76	Sesquiterpene synthase Tps1 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
A0A6J1CNP6	3.2e-50	73.48	(+)-gamma-cadinene synthase-like OS=Momordica charantia OX=3673 GN=LOC111012779 ...	[more]
A0A0A0L579	2.7e-49	74.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G097040 PE=4 SV=1	[more]
Q66PX8	7.8e-49	73.48	Beta-caryophyllene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]

BLAST of Clc10G05970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23960.1	4.1e-26	43.94	terpene synthase 21	[more]
AT5G23960.2	4.1e-26	43.94	terpene synthase 21	[more]
AT5G44630.1	1.3e-19	32.58	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G20200.1	2.9e-19	34.85	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G29190.1	2.4e-18	34.09	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 1..132 e-value: 4.4E-46 score: 159.3
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 1..132
None	No IPR available	PFAM	PF19086	Terpene_syn_C_2	coord: 1..76 e-value: 3.3E-21 score: 76.0
None	No IPR available	PANTHER	PTHR31225	OS04G0344100 PROTEIN-RELATED	coord: 1..116
None	No IPR available	PANTHER	PTHR31225:SF111	TERPENE SYNTHASE 2-RELATED	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G05970.1	Clc10G05970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity