Clc10G05900 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G05900
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein of unknown function, DUF538
Location	ClcChr10: 7478170 .. 7479181 (+)
RNA-Seq Expression	Clc10G05900
Synteny	Clc10G05900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTCATCCACCGTATTTCTTCAAACTTCCTCCATCAAAAACAACATCAACAAGAAGAACAAAACAATCCTCTGCTCTTAAAATCCCCTTTTCTTCTTCTTTTAATCCGCCATGGCCGCCTTCTTCCATTTCACCATTTTCTTCTTAATTTCCCTCATCTCTCTCTCTCTTCCCTCATCCCTCTCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCGCCGGGCCTTCTTCCAAAAGAAGTCAAATCTTACTCCCTCTCTCAAAATGGCCTTCTCGAAGTCTTATTAGATGGTCCTTGTTTAACCAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAGGGCTAATCTTAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTCTTTCTGTGGCTTCCTGTTAAAGATATAATCGTTGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCCCTCTTCGAAGATCCTCCCAGTTGCAAGACGCAACTTAAAGGTATATTGGAAATTAGGGTTTTGAATTTTCAATTGTTGGTTTTTCTCTGTTTCTGAATTAAATGGATTGCTGTGTGTTTTCTTGACTGTGGATTTGGATTTTGTTGAAGATTCGATCTGCAGATTTGATTCATTTAGATGATTTTGTAATTTTTGTGTAGGGGGTTTGAGGAATCATGTGAGGAAGGAGAAAGGATTTGAAGCTATGAGATAGAAAGGAAAGGAAAATGCCAAAATTCTGCTGGAAAATTTTGTCTTCTTTTTTGTTTTTTTGTTTAATTATTTTATTTTTGTTCTGCCCCCAATGCCTATATAACTAAATTAGTTCTAATAATAGTTTATACTGTTATACGAGTTACTAGAGGTGTTTTTTAGAATTTTTTTTTTCTTTCTTTGTGTATAAAAATGAAAAGACGAGTTCCCCTTTCTTGGAATCCTATGCCAATATCTTACTTCAAAA

mRNA sequence

CAGTCATCCACCGTATTTCTTCAAACTTCCTCCATCAAAAACAACATCAACAAGAAGAACAAAACAATCCTCTGCTCTTAAAATCCCCTTTTCTTCTTCTTTTAATCCGCCATGGCCGCCTTCTTCCATTTCACCATTTTCTTCTTAATTTCCCTCATCTCTCTCTCTCTTCCCTCATCCCTCTCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCGCCGGGCCTTCTTCCAAAAGAAGTCAAATCTTACTCCCTCTCTCAAAATGGCCTTCTCGAAGTCTTATTAGATGGTCCTTGTTTAACCAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAGGGCTAATCTTAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTCTTTCTGTGGCTTCCTGTTAAAGATATAATCGTTGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCCCTCTTCGAAGATCCTCCCAGTTGCAAGACGCAACTTAAAGGGGGTTTGAGGAATCATGTGAGGAAGGAGAAAGGATTTGAAGCTATGAGATAGAAAGGAAAGGAAAATGCCAAAATTCTGCTGGAAAATTTTGTCTTCTTTTTTGTTTTTTTGTTTAATTATTTTATTTTTGTTCTGCCCCCAATGCCTATATAACTAAATTAGTTCTAATAATAGTTTATACTGTTATACGAGTTACTAGAGGTGTTTTTTAGAATTTTTTTTTTCTTTCTTTGTGTATAAAAATGAAAAGACGAGTTCCCCTTTCTTGGAATCCTATGCCAATATCTTACTTCAAAA

Coding sequence (CDS)

ATGGCCGCCTTCTTCCATTTCACCATTTTCTTCTTAATTTCCCTCATCTCTCTCTCTCTTCCCTCATCCCTCTCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCGCCGGGCCTTCTTCCAAAAGAAGTCAAATCTTACTCCCTCTCTCAAAATGGCCTTCTCGAAGTCTTATTAGATGGTCCTTGTTTAACCAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAGGGCTAATCTTAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTCTTTCTGTGGCTTCCTGTTAAAGATATAATCGTTGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCCCTCTTCGAAGATCCTCCCAGTTGCAAGACGCAACTTAAAGGGGGTTTGAGGAATCATGTGAGGAAGGAGAAAGGATTTGAAGCTATGAGATAG

Protein sequence

MAAFFHFTIFFLISLISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGLLEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR

Homology

[Close]

BLAST of Clc10G05900 vs. NCBI nr
Match: XP_038905336.1 (uncharacterized protein LOC120091403 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 157/166 (94.58%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MAAFFHFTIFFLI--SLISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGL 60
           MAAFFHFTIFF I  SLISLSLPSSLSLS TIHDLLRSKGLPPGLLPKEVKSYSLS NGL
Sbjct: 1   MAAFFHFTIFFTISLSLISLSLPSSLSLSSTIHDLLRSKGLPPGLLPKEVKSYSLSPNGL 60

Query: 61  LEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 120
           LEV LDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 61  LEVFLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 120

Query: 121 LILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           LILFDIGVAHKQLALSLFEDPPSCK+Q KGGLRNHVRKEKGFEA+R
Sbjct: 121 LILFDIGVAHKQLALSLFEDPPSCKSQPKGGLRNHVRKEKGFEALR 166

[Close]

BLAST of Clc10G05900 vs. NCBI nr
Match: XP_004149935.1 (uncharacterized protein LOC101212020 [Cucumis sativus] >KGN56179.1 hypothetical protein Csa_010423 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 6.4e-71
Identity = 145/161 (90.06%), Postives = 150/161 (93.17%), Query Frame = 0


Query: 6   HFTIF-FLISLISLSLPSSLSL-SPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGLLEVLL 65
           HF+IF F ISLISLSLPSSLSL S TIHDLLRSKGLPPGLLPKEVKSYSLS NGLL+V L
Sbjct: 7   HFSIFIFYISLISLSLPSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFL 66

Query: 66  DGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           IGVAHKQLALSLFEDPPSCK+Q KG LRNHVRKEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Clc10G05900 vs. NCBI nr
Match: KAG6600749.1 (hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031389.1 hypothetical protein SDJN02_05429, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 146/166 (87.95%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 2   AAFFH-FTIFFLISLISLS--LPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGL 61
           A FFH FT FF ISL+SLS  LP SLSLS TIHDLLRS+GLP GLLPKEVKSY+LSQNGL
Sbjct: 4   AFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEV LDGPCLTKYENRVLF+SVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           LILFDIGVAHKQLALSLFEDPPSCK Q K  LRN VRKEKGFEA+R
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Clc10G05900 vs. NCBI nr
Match: XP_022992944.1 (uncharacterized protein LOC111489122 [Cucurbita maxima])

HSP 1 Score: 275.4 bits (703), Expect = 3.2e-70
Identity = 145/166 (87.35%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 2   AAFFH-FTIFFLISL--ISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGL 61
           A FFH FT+FF ISL  +SL LP SLSLS TIHDLLRS+GLP GLLPKEVKSY+LSQNGL
Sbjct: 4   AFFFHNFTLFFYISLLFLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEV LDGPCLTKYENRVLF+SVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           LILFDIGVAHKQLALSLFEDPPSCK Q K  LRN VRKEKGFEA+R
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Clc10G05900 vs. NCBI nr
Match: XP_022942558.1 (uncharacterized protein LOC111447556 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 5.4e-70
Identity = 145/166 (87.35%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 2   AAFFH-FTIFFLISLIS--LSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGL 61
           A FFH FT FF ISL+S  L LP SLSLS TIHDLLRS+GLP GLLPKEVKSY+LSQNGL
Sbjct: 4   AFFFHNFTFFFYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEV LDGPCLTKYENRVLF+SVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           LILFDIGVAHKQLALSLFEDPPSCK Q K  LRN VRKEKGFEA+R
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Clc10G05900 vs. ExPASy TrEMBL
Match: A0A0A0L572 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71
Identity = 145/161 (90.06%), Postives = 150/161 (93.17%), Query Frame = 0


Query: 6   HFTIF-FLISLISLSLPSSLSL-SPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGLLEVLL 65
           HF+IF F ISLISLSLPSSLSL S TIHDLLRSKGLPPGLLPKEVKSYSLS NGLL+V L
Sbjct: 7   HFSIFIFYISLISLSLPSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFL 66

Query: 66  DGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           IGVAHKQLALSLFEDPPSCK+Q KG LRNHVRKEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Clc10G05900 vs. ExPASy TrEMBL
Match: A0A6J1JYV3 (uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 145/166 (87.35%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 2   AAFFH-FTIFFLISL--ISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGL 61
           A FFH FT+FF ISL  +SL LP SLSLS TIHDLLRS+GLP GLLPKEVKSY+LSQNGL
Sbjct: 4   AFFFHNFTLFFYISLLFLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEV LDGPCLTKYENRVLF+SVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           LILFDIGVAHKQLALSLFEDPPSCK Q K  LRN VRKEKGFEA+R
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Clc10G05900 vs. ExPASy TrEMBL
Match: A0A6J1FV48 (uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC111447556 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70
Identity = 145/166 (87.35%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 2   AAFFH-FTIFFLISLIS--LSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGL 61
           A FFH FT FF ISL+S  L LP SLSLS TIHDLLRS+GLP GLLPKEVKSY+LSQNGL
Sbjct: 4   AFFFHNFTFFFYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEV LDGPCLTKYENRVLF+SVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           LILFDIGVAHKQLALSLFEDPPSCK Q K  LRN VRKEKGFEA+R
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Clc10G05900 vs. ExPASy TrEMBL
Match: A0A5A7VEX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001090 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.5e-70
Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 6   HFTIF-FLISLISLSLPSSLSL-SPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGLLEVLL 65
           HF+IF F ISLISLSLP SLSL S TIHDLLRSKGLPPGLLPKEVKSYSLS NGLL+V L
Sbjct: 7   HFSIFIFYISLISLSLPPSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLQVFL 66

Query: 66  DGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDP SGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPNSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           IGVAHKQLALSLFEDPPSCK+Q KG LRNHVRKEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQPKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Clc10G05900 vs. ExPASy TrEMBL
Match: A0A1S3BUE7 (uncharacterized protein LOC103493397 OS=Cucumis melo OX=3656 GN=LOC103493397 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.5e-70
Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 6   HFTIF-FLISLISLSLPSSLSL-SPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGLLEVLL 65
           HF+IF F ISLISLSLP SLSL S TIHDLLRSKGLPPGLLPKEVKSYSLS NGLL+V L
Sbjct: 7   HFSIFIFYISLISLSLPPSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLQVFL 66

Query: 66  DGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDP SGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPNSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           IGVAHKQLALSLFEDPPSCK+Q KG LRNHVRKEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQPKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Clc10G05900 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 184.1 bits (466), Expect = 9.0e-47
Identity = 91/156 (58.33%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 9   IFFLISLISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLSQNGLLEVLLDGPCL 68
           +  L++ + LSL  S    PT+HD+LRS+GLP GLLP+EV SY L  +G LEV L  PC 
Sbjct: 8   MILLLTTLRLSLSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCY 67

Query: 69  TKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAH 128
            K+E  V F++VVR NLSYGSL+GV+GL+Q+ELFLWL VKDI+V++P SG+I+FDIGVA 
Sbjct: 68  AKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAF 127

Query: 129 KQLALSLFEDPPSCKTQLKGGLRNHVRKEKGFEAMR 165
           KQL+LSLFEDPP CK    G L+  +R+++GFEA +
Sbjct: 128 KQLSLSLFEDPPKCKPD--GVLKKKMRRDRGFEAQK 161

[Close]

BLAST of Clc10G05900 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-39
Identity = 80/135 (59.26%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 9   IFFLISLISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSL-SQNGLLEVLLDGPC 68
           +  L+ L+    PSS S   +I +LL ++GLP GL P  V+SYSL  + G LEV L  PC
Sbjct: 4   LLLLLLLVPFITPSSQS---SIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPC 63

Query: 69  LTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 128
             ++ENRV F  V++ANLSYG L+G++GLTQEELFLWLPVK I V+DP SGL+LFDIGVA
Sbjct: 64  FARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVA 123

Query: 129 HKQLALSLFEDPPSC 143
           HKQ++ SLFEDPP C
Sbjct: 124 HKQISRSLFEDPPVC 135

[Close]

BLAST of Clc10G05900 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 63/138 (45.65%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 9   IFFLISLI--SLSLPSSLSL-SPTIHDLLRSKGLPPGLLPKEVKSYSLS-QNGLLEVLLD 68
           +FFLI ++  S+  P   SL  P+ +D LR   LP G++PK V ++S+  + G   V L 
Sbjct: 7   LFFLIIVLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALP 66

Query: 69  GPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDI 128
            PC  K+EN+  F   +   LS G +  + G+TQ+ELFLW  VK I VD   SGLI FD+
Sbjct: 67  VPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDV 126

Query: 129 GVAHKQLALSLFEDPPSC 143
           GVA KQL+LSLFE P  C
Sbjct: 127 GVADKQLSLSLFESPRDC 144

[Close]

BLAST of Clc10G05900 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-23
Identity = 50/132 (37.88%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 12  LISLISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLS-QNGLLEVLLDGPCLTK 71
           L+ +  +S+ +++S + TI+++L + GLP G+ PK V+ ++   + G   V L+  C  K
Sbjct: 13  LVLVAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAK 72

Query: 72  YENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQ 131
           YE  + + + +   +    +  + G++ +ELFLW PVK I VD P SGLI FD+GV  KQ
Sbjct: 73  YETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQ 132

Query: 132 LALSLFEDPPSC 143
            +LSLFE P  C
Sbjct: 133 YSLSLFETPRDC 144

[Close]

BLAST of Clc10G05900 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 1   MAAFFHFTIFFLISLISLSLPSSLSLSPTIHDLLRSKGLPPGLLPKEVKSYSLS-QNGLL 60
           M      T+   +    +S+ + ++ + +I ++L + GLP GL PK VK ++++ + G  
Sbjct: 1   MLRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRF 60

Query: 61  EVLLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGL 120
            V L+  C  KYE  + +  +V   + Y  +  + G++ +ELFLWL VK I VD P SGL
Sbjct: 61  SVYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL 120

Query: 121 ILFDIGVAHKQLALSLFEDPPSC 143
           I FD+GV  KQ +LSLFE P  C
Sbjct: 121 IFFDVGVLRKQYSLSLFETPRDC 143

The following BLAST results are available for this feature:

BLAST of Clc10G05900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905336.1	1.4e-78	94.58	uncharacterized protein LOC120091403 [Benincasa hispida]	[more]
XP_004149935.1	6.4e-71	90.06	uncharacterized protein LOC101212020 [Cucumis sativus] >KGN56179.1 hypothetical ...	[more]
KAG6600749.1	1.4e-70	87.95	hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992944.1	3.2e-70	87.35	uncharacterized protein LOC111489122 [Cucurbita maxima]	[more]
XP_022942558.1	5.4e-70	87.35	uncharacterized protein LOC111447556 [Cucurbita moschata]	[more]

BLAST of Clc10G05900 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G05900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L572	3.1e-71	90.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1	[more]
A0A6J1JYV3	1.5e-70	87.35	uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122...	[more]
A0A6J1FV48	2.6e-70	87.35	uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC1114475...	[more]
A0A5A7VEX6	4.5e-70	88.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUE7	4.5e-70	88.82	uncharacterized protein LOC103493397 OS=Cucumis melo OX=3656 GN=LOC103493397 PE=...	[more]

BLAST of Clc10G05900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54530.1	9.0e-47	58.33	Protein of unknown function, DUF538	[more]
AT1G61667.1	3.1e-39	59.26	Protein of unknown function, DUF538	[more]
AT5G16380.1	1.1e-23	45.65	Protein of unknown function, DUF538	[more]
AT3G07470.1	4.1e-23	37.88	Protein of unknown function, DUF538	[more]
AT3G07460.1	1.5e-22	37.06	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 21..144 e-value: 2.0E-25 score: 91.1
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 6..143
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 31..137 e-value: 8.5E-26 score: 90.6
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 8..163
None	No IPR available	PANTHER	PTHR31676:SF118	SUBFAMILY NOT NAMED	coord: 8..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G05900.1	Clc10G05900.1	mRNA